BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006012
         (664 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/674 (70%), Positives = 537/674 (79%), Gaps = 36/674 (5%)

Query: 2   ILLPPQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQ 61
           +LL P PL  RFP+ H   P+ R H I QP    +T       TASGE+S     F+   
Sbjct: 1   MLLLPAPLPTRFPSYHFLSPVLRDHRILQPPLLATTSA--AVTTASGEAS----QFSKPL 54

Query: 62  NDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSEN-SNSESASALASSP-SSLNRVEFKLAE 119
           N    E     D+ S+  +RYDFTPLL FLS + S+S+S + + S P +SL+  EF+L E
Sbjct: 55  N----EYGSSGDLNSVPNRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVE 110

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           SYRAVPAPLWHSLLK+LCS +SSI  AY++V+WL++HNLC+SYELLYSILIHALGRSEKL
Sbjct: 111 SYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKL 170

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           YEAFLLSQRQ LTPLTYNALI ACARNDDLEKALNLMS+MR+DG+  DF+NYS +IQSLT
Sbjct: 171 YEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLT 230

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           RTNK DSS+LQK+Y EIE DKIELDGQLLND+IVGFAK+GD ++AM FL M QG GLSPK
Sbjct: 231 RTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPK 290

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           TAT  AVITAL N+GRT EAEA+FEELKE GL PRT+AYNALLKGYVK G LKDAE +VS
Sbjct: 291 TATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVS 350

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EMERSG  PDEHTYSLLIDAYANAGRWESARIVLKEME S  +PNS+++SRILA YRDRG
Sbjct: 351 EMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRG 410

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +WQ++FQVL+EM++SGV PD HFYNVMIDTFGK NCL HA+A FDRM  EG++PD +TWN
Sbjct: 411 KWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWN 470

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLIDCH K G +++AEELFE MQE G  PCTTTYNIMIN  GEQERWEDVK LLG M++Q
Sbjct: 471 TLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQ 530

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQA 575
           GLL NVVTYTTLVDIYGQSGRF DAIECLE                        GLS+QA
Sbjct: 531 GLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQA 590

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +NAFRVMR DGLKPS L LNSLINAFGED+RDAEAF+VLQYMKEN LKPDVVTYTTLMKA
Sbjct: 591 INAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKA 650

Query: 636 LIRVDKFHKVFSSY 649
           LIRV+KF KV + Y
Sbjct: 651 LIRVEKFDKVPAVY 664



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 194/407 (47%), Gaps = 8/407 (1%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YN 197
           ++ A + ++ +Q + L      L ++ I ALG + +  EA  + +  +   L P T  YN
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAV-ITALGNAGRTEEAEAIFEELKEGGLMPRTRAYN 330

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           AL+    +   L+ A +++S+M + G+  D   YSL+I +     + +S+ +  + KE+E
Sbjct: 331 ALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARI--VLKEME 388

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  +  + + ++  +   G   K+ + L   +  G+SP    Y  +I          
Sbjct: 389 ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 448

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A A F+ ++  G++P    +N L+  + K G+   AE +   M+ SG  P   TY+++I
Sbjct: 449 HALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMI 508

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +++    RWE  + +L +M+      N   Y+ ++  Y   G ++   + L+ MKS G++
Sbjct: 509 NSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLK 568

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P +  YN +I+ + +      A+ AF  M ++G++P  +  N+LI+   +  R   A  +
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            + M+E    P   TY  ++  L   E+++ V  +   M   G  P+
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 675


>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
 gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  948 bits (2450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/684 (68%), Positives = 550/684 (80%), Gaps = 41/684 (5%)

Query: 1   MILLPPQPLSVRFPAIHSACPITRHH------VIFQPAFSVSTITGITTATASGESSFSS 54
           M+L PP PL  RFP++++  PI  HH      +IFQP FS    T  TT  A    S+S 
Sbjct: 1   MLLFPP-PLPNRFPSVYTTSPIVHHHHHHHHHLIFQPPFSA---TSTTTNFADSSLSYSK 56

Query: 55  SSFTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSEN-----SNSESASALASSPSS 109
               + QND E     DDDVL LQ +RYDFTPLL++LS+           + + +SSP+S
Sbjct: 57  RLHYASQNDIEGFS--DDDVLPLQSRRYDFTPLLDYLSKKITTSTDTDSDSDSASSSPTS 114

Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL 169
           L+  EF+LAESYR VP PLWHSLLK+LC+S+SSI LAYAVV WLQKHNLC+SYELLYSIL
Sbjct: 115 LDPTEFQLAESYRVVPGPLWHSLLKSLCTSSSSIGLAYAVVLWLQKHNLCFSYELLYSIL 174

Query: 170 IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           IHALG+SEKLYEAFLLSQRQ LTPLTYNALISACARN+DLEKALNL+++MRQDGY  DF+
Sbjct: 175 IHALGQSEKLYEAFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFV 234

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           NYSL+I+SL R N++DS++LQKLY+EIECDK+ELD QL ND+IVGFAKAGD SKA+ FLG
Sbjct: 235 NYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLG 294

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           + QG GLS KTAT  AVI AL N GRT+EAEA+FEE++++GLKPRT+AYNALL+GYVK G
Sbjct: 295 VVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAG 354

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            LKDAEFVVSEMERSGV P+E TYS LIDAY NAGRWESARIVLKEME S+ +PN++++S
Sbjct: 355 LLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFS 414

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
           RIL+ YRD+GEWQ++FQVL+EM++SGV PD  FYNVMIDTFGK+NCL HAMA FDRMLSE
Sbjct: 415 RILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSE 474

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GIEPDT+TWNTLIDCH + G++DRAEELFEEM E GY PC TT+NIMIN  G+QERW+DV
Sbjct: 475 GIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDV 534

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------- 569
           K LL +MR+QGL+PN VTYTTL+DIYG+SGRF+DAIECL+                    
Sbjct: 535 KNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINA 594

Query: 570 ----GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               GLS+QAV+AFR MR DGLKPS LALNSLINAFGED+RDAEAF VLQYMKEN LKPD
Sbjct: 595 YAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPD 654

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VVTYTTLMKALIRV+KF KV S Y
Sbjct: 655 VVTYTTLMKALIRVEKFDKVPSVY 678



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 178/381 (46%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I ALG   +  EA  + +  R   L P T  YNAL+    +   L+ A  ++S+M + G
Sbjct: 311 VIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSG 370

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              +   YS +I +     + +S+ +  + KE+E   ++ +  + + ++  +   G+  K
Sbjct: 371 VSPNEQTYSFLIDAYGNAGRWESARI--VLKEMEASNVQPNAYVFSRILSSYRDKGEWQK 428

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           + + L   +  G+ P    Y  +I           A A F+ +   G++P T  +N L+ 
Sbjct: 429 SFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLID 488

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + + G    AE +  EM   G  P   T++++I+++ +  RW+  + +L  M      P
Sbjct: 489 CHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVP 548

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           NS  Y+ ++  Y   G +    + L +MK++G++P +  YN +I+ + +      A++AF
Sbjct: 549 NSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAF 608

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M  +G++P  +  N+LI+   +  R   A  + + M+E    P   TY  ++  L   
Sbjct: 609 RAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRV 668

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           E+++ V  +   M   G  P+
Sbjct: 669 EKFDKVPSVYEEMILSGCTPD 689



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 3/205 (1%)

Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           R+E+L+E  +          T+N +I++    +  +   NL++ MR  G   + + Y+ +
Sbjct: 498 RAEELFEEMMEGGYSPCNT-TFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTL 556

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I    ++ + + ++  +   +++   ++    + N +I  +A+ G + +A+      +  
Sbjct: 557 IDIYGKSGRFNDAI--ECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVD 614

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P      ++I A     R  EA  V + +KE+ LKP    Y  L+K  +++      
Sbjct: 615 GLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 674

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDA 379
             V  EM  SG  PD    ++L  A
Sbjct: 675 PSVYEEMILSGCTPDRKARAMLRSA 699


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/673 (69%), Positives = 544/673 (80%), Gaps = 33/673 (4%)

Query: 1   MILLPPQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSK 60
           M+L PP P + RFP+I   CPI   H          + T  +    +   S  S S  + 
Sbjct: 1   MLLFPPPP-ATRFPSITVTCPIPVRHYHHHSQLPPLSATNTSATAIASSFSNLSLSLDNN 59

Query: 61  QNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAES 120
           Q DTE+      D+L+LQ +RYDFTPLLNFLS  +  +++   +SSP+SL+  EF+LAES
Sbjct: 60  QKDTEQ------DILALQSRRYDFTPLLNFLS--NQIKASPNTSSSPTSLDTTEFQLAES 111

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           YRAVP PLWHSLLK+L SS+SSI LAYAVVSWLQKHNLC+SYELLYSILIHALGRSEKLY
Sbjct: 112 YRAVPGPLWHSLLKSLSSSSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLY 171

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           EAFLLSQ+Q L+PLTYNALI+ACARN+DLEKA+NL+S+MRQDGY  DF+NYSL+IQSL R
Sbjct: 172 EAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVR 231

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +N+IDS +LQKLY EI+CDK+ELD QL ND+IVGFAKAGD +KAM FLGM Q  GLSP+T
Sbjct: 232 SNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRT 291

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           AT  AVI+AL +SGR IEAEA+FEE+K++GLKP+T+AYN LLKGYVK G LKDAEF+VSE
Sbjct: 292 ATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSE 351

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           MERSGV PDE TYSLLIDAY+NAGRWESARIVLKEME ++  PNS+++SRILA YRDRGE
Sbjct: 352 MERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGE 411

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           WQ++FQVLKEMK+SGV PD HFYNVMIDTFGK++CL HAM  FD+MLSEGI+PDT+TWNT
Sbjct: 412 WQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNT 471

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LIDCH K   ++RAEELFEEM E+G+ PC TT+NIMIN  GEQERW+DVK L+GNMR+ G
Sbjct: 472 LIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLG 531

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAV 576
           LLPNVVTYTTL+DIYG+SGRF DAIECLE                        GLS+QAV
Sbjct: 532 LLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAV 591

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           NAFR+MR D LKPS LALNSLINAFGED+RDAEAF+VL+YMKEN LKPDVVTYTTLMKAL
Sbjct: 592 NAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKAL 651

Query: 637 IRVDKFHKVFSSY 649
           IRVDKF+KV S Y
Sbjct: 652 IRVDKFNKVPSVY 664



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/381 (23%), Positives = 178/381 (46%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I ALG S ++ EA  + +  +   L P T  YN L+    +   L+ A  ++S+M + G
Sbjct: 297 VISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSG 356

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I + +   + +S+ +  + KE+E + I  +  + + ++  +   G+  K
Sbjct: 357 VSPDECTYSLLIDAYSNAGRWESARI--VLKEMEANNIMPNSYVFSRILASYRDRGEWQK 414

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           + + L   +  G+ P    Y  +I           A   F+++   G++P T  +N L+ 
Sbjct: 415 SFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLID 474

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K    + AE +  EM   G  P   T++++I+++    RW+  + ++  M      P
Sbjct: 475 CHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLP 534

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++  Y   G +    + L++MKS+G++P +  YN +I+ + +      A+ AF
Sbjct: 535 NVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAF 594

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M ++ ++P  +  N+LI+   +  R   A  + + M+E    P   TY  ++  L   
Sbjct: 595 RLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRV 654

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           +++  V  +   M   G  P+
Sbjct: 655 DKFNKVPSVYEEMILAGCTPD 675



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 7/207 (3%)

Query: 175 RSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           R+E+L+E  +    +  +P   T+N +I++    +  +    LM  MR  G   + + Y+
Sbjct: 484 RAEELFEEMM---EKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYT 540

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I    ++ +   ++  +  ++++   ++    + N +I  +A+ G + +A+    + +
Sbjct: 541 TLIDIYGKSGRFSDAI--ECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMR 598

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              L P      ++I A     R  EA +V + +KE+ LKP    Y  L+K  +++    
Sbjct: 599 ADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFN 658

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDA 379
               V  EM  +G  PD    ++L  A
Sbjct: 659 KVPSVYEEMILAGCTPDRKARAMLRSA 685


>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  918 bits (2372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/678 (67%), Positives = 525/678 (77%), Gaps = 58/678 (8%)

Query: 1   MILLPPQPLSVRFPA--IHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFT 58
           M LLPPQ  +  FP+   H        H +  P  S S IT   T               
Sbjct: 1   MNLLPPQLTTTPFPSPSTHRHSHHNNIHFLPPPQSSASPITAKPTIL------------- 47

Query: 59  SKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLA 118
                    EE  DD+LSL  +RYDFTPLL+FLS  SNS       S P+SL+  EF+LA
Sbjct: 48  ---------EEGPDDILSLHNRRYDFTPLLSFLSTTSNS-------SPPTSLDSTEFQLA 91

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSS---IDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           ESYRAVPAPLWH+ LK+LC+S+SS   I LAYAVVSWLQKHNLC+SYELLYSILI+ALGR
Sbjct: 92  ESYRAVPAPLWHAFLKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINALGR 151

Query: 176 SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           SEKLYEAFLLSQRQ LTPLTYNALI ACARN D+EKALNLMSKMR+DGY  DF+NYS +I
Sbjct: 152 SEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSII 211

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           Q LTR+NKIDS +LQKLY EIE DKIE+DG L+ND+IVGF+KAGD ++AMRFL MAQ  G
Sbjct: 212 QYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNG 271

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           L+PK +T  AVI AL NSGRT EAEA+FEE++E+GL+PRT+AYNALLKGYV+ G LKDAE
Sbjct: 272 LNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAE 331

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
           FVVSEME++GV PDE TYSLLID YA+AGRWESARIVLKEME S+ +PNS+++SRILA Y
Sbjct: 332 FVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANY 391

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
           RD+GEWQ++FQVLK+MKSSGV+PD HFYNVMIDTFGKYNCL HAMA F+RMLSEGI PD 
Sbjct: 392 RDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI 451

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +TWNTLIDCH K GR+D AEELF EMQ+RGY PC TTYNIMIN +GEQ+RWE V   L  
Sbjct: 452 VTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSK 511

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GL 571
           M++QGL PN +TYTTLVD+YG+SGRF DAIECLE                        GL
Sbjct: 512 MQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 571

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S+ AVNAFR+M T+GL PS LALNSLINAFGED+RDAEAFAVLQYMKEN ++PDVVTYTT
Sbjct: 572 SELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTT 631

Query: 632 LMKALIRVDKFHKVFSSY 649
           LMKALIRV+KF KV + Y
Sbjct: 632 LMKALIRVEKFQKVPAVY 649



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 179/381 (46%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I ALG S + +EA  L +  R   L P T  YNAL+    R   L+ A  ++S+M + G
Sbjct: 282 VILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG 341

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I       + +S+ +  + KE+E   ++ +  + + ++  +   G+  K
Sbjct: 342 VKPDEQTYSLLIDVYAHAGRWESARI--VLKEMEASNVQPNSYVFSRILANYRDKGEWQK 399

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           + + L   +  G+ P    Y  +I           A A FE +   G+ P    +N L+ 
Sbjct: 400 SFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLID 459

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K G    AE + SEM++ G  P   TY+++I++     RWE     L +M+    +P
Sbjct: 460 CHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQP 519

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           NS  Y+ ++  Y   G +    + L+ +KS+G +P +  YN +I+ + +      A+ AF
Sbjct: 520 NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF 579

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M +EG+ P  +  N+LI+   +  R   A  + + M+E    P   TY  ++  L   
Sbjct: 580 RLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRV 639

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           E+++ V  +   M A G  P+
Sbjct: 640 EKFQKVPAVYEEMVASGCTPD 660



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR +   E F   Q++  +P   TYN +I++       E+    +SKM+  G   + I Y
Sbjct: 465 GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    ++ +   ++  +  + ++    +    + N +I  +A+ G +  A+    + 
Sbjct: 525 TTLVDVYGKSGRFSDAI--ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLM 582

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              GL+P      ++I A     R  EA AV + +KE+ ++P    Y  L+K  +++   
Sbjct: 583 TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKF 642

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           +    V  EM  SG  PD    ++L  A
Sbjct: 643 QKVPAVYEEMVASGCTPDRKARAMLRSA 670


>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  915 bits (2364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/611 (72%), Positives = 509/611 (83%), Gaps = 30/611 (4%)

Query: 69  EDDDDVLSLQKQRYDFTPLLNFLSENSNSE------SASALASSPSSLNRVEFKLAESYR 122
           E+DD+  S   +RYDF+PLL FLS     E      S S   +SP SLN VEF+L ESY 
Sbjct: 69  EEDDEFSSEVHRRYDFSPLLKFLSRFGPVELVLDSESESESEASPESLNPVEFELVESYS 128

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           AVPAP WHSL+K+LCSS SS+ LAYAVVSWLQKHNLC+SYELLYSILIHALGRSEKLYEA
Sbjct: 129 AVPAPYWHSLIKSLCSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA 188

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           FLLSQ+Q LTPLTYNALI ACARN+D+EKALNL+S+MRQDGY  DF+NYSLVIQSLTR N
Sbjct: 189 FLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCN 248

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           KIDS +LQ+LYKEIE DK+ELD QL+ND+I+GFAK+GD S+A++ LGMAQ  GLS KTAT
Sbjct: 249 KIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTAT 308

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
             ++I+AL+NSGRT+EAEA+FEEL++SG+KPRTKAYNALLKGYVK G LKDAE +VSEME
Sbjct: 309 LVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEME 368

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           + GV PDEHTYSLLIDAY NAGRWESARIVLKEME    +PNSF++SR+LAGYRDRGEWQ
Sbjct: 369 KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQ 428

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +TFQVLKEMKS GV+PD  FYNV+IDTFGK+NCL HAM  FDRMLSEGIEPD +TWNTLI
Sbjct: 429 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 488

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           DCH K GR+  AEE+FE M+ RG  PC TTYNIMIN  G+QERW+D+KRLLG M++QG+L
Sbjct: 489 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 548

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNA 578
           PNVVT+TTLVD+YG+SGRF+DAIECLE                        GLS+QAVNA
Sbjct: 549 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 608

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           FRVM +DGLKPS LALNSLINAFGED+RDAEAFAVLQYMKENG+KPDVVTYTTLMKALIR
Sbjct: 609 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 668

Query: 639 VDKFHKVFSSY 649
           VDKF KV   Y
Sbjct: 669 VDKFQKVPGVY 679



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 182/381 (47%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I AL  S +  EA  L +  R   + P T  YNAL+    +   L+ A  ++S+M + G
Sbjct: 312 IISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRG 371

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I +     + +S+ +  + KE+E   ++ +  + + ++ G+   G+  K
Sbjct: 372 VSPDEHTYSLLIDAYVNAGRWESARI--VLKEMETGDVQPNSFVFSRLLAGYRDRGEWQK 429

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
             + L   + +G+ P    Y  VI           A   F+ +   G++P    +N L+ 
Sbjct: 430 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 489

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K G    AE +   MER G LP   TY+++I++Y +  RW+  + +L +M+     P
Sbjct: 490 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 549

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   ++ ++  Y   G +    + L+EMKS G++P +  YN +I+ + +      A+ AF
Sbjct: 550 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 609

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M S+G++P  +  N+LI+   +  R   A  + + M+E G  P   TY  ++  L   
Sbjct: 610 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 669

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           ++++ V  +   M   G  P+
Sbjct: 670 DKFQKVPGVYEEMIMSGCKPD 690



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 7/257 (2%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y+++I   G+   L  A      +LS+      +T+N LI    ++     A  +   M
Sbjct: 448 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 507

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G       Y+++I S     + D   +++L  +++   I  +      ++  + K+G
Sbjct: 508 ERRGCLPCATTYNIMINSYGDQERWDD--MKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 565

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + A+  L   + VGL P +  Y A+I A +  G + +A   F  +   GLKP   A N
Sbjct: 566 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 625

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+  + +     +A  V+  M+ +GV PD  TY+ L+ A     +++    V +EM +S
Sbjct: 626 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMS 685

Query: 400 HAKPNSFIYSRILAGYR 416
             KP+    S + +  R
Sbjct: 686 GCKPDRKARSMLRSALR 702


>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  914 bits (2361), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/650 (70%), Positives = 520/650 (80%), Gaps = 30/650 (4%)

Query: 2   ILLPPQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQ 61
           +LL P PL  RFP+ H   P+ R H I QP    +T       TASGE+S     F+   
Sbjct: 72  MLLLPAPLPTRFPSYHFLSPVLRDHRILQPPLLATTSA--AVTTASGEAS----QFSKPL 125

Query: 62  NDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSEN-SNSESASALASSP-SSLNRVEFKLAE 119
           N    E     D+ S+  +RYDFTPLL FLS + S+S+S + + S P +SL+  EF+L E
Sbjct: 126 N----EYGSSGDLNSVPNRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVE 181

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           SYRAVPAPLWHSLLK+LCS +SSI  AY++V+WL++HNLC+SYELLYSILIHALGRSEKL
Sbjct: 182 SYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKL 241

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           YEAFLLSQRQ LTPLTYNALI ACARNDDLEKALNLMS+MR+DGY  DF+NYS +IQSLT
Sbjct: 242 YEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLT 301

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           RTNK DSS+LQK+Y EIE DKIELDGQLLND+IVGFAK+GD ++AM FL M QG GLSPK
Sbjct: 302 RTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPK 361

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           TAT  AVITAL N+GRT EAEA+FEELKE GL PRT+AYNALLKGYVK G LKDAE +VS
Sbjct: 362 TATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVS 421

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EMERSG  PDEHTYSLLIDAYANAGRWESARIVLKEME S  +PNS+++SRILA YRDRG
Sbjct: 422 EMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRG 481

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +WQ++FQVL+EM++SGV PD HFYNVMIDTFGK NCL HA+A FDRM  EG++PD +TWN
Sbjct: 482 KWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWN 541

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLIDCH K G +++AEELFE MQE G  PCTTTYNIMIN  GEQERWEDVK LLG M++Q
Sbjct: 542 TLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQ 601

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GLL NVVTYTTL                  GLS+QA+NAFRVMR DGLKPS L LNSLIN
Sbjct: 602 GLLANVVTYTTL------------------GLSEQAINAFRVMRADGLKPSVLVLNSLIN 643

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           AFGED+RDAEAF+VLQYMKEN LKPDVVTYTTLMKALIRV+KF KV + Y
Sbjct: 644 AFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVY 693



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 173/371 (46%), Gaps = 15/371 (4%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YN 197
           ++ A + ++ +Q + L      L ++ I ALG + +  EA  + +  +   L P T  YN
Sbjct: 343 VNRAMSFLAMVQGNGLSPKTATLVAV-ITALGNAGRTEEAEAIFEELKEGGLMPRTRAYN 401

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           AL+    +   L+ A +++S+M + G+  D   YSL+I +     + +S+ +  + KE+E
Sbjct: 402 ALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARI--VLKEME 459

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  +  + + ++  +   G   K+ + L   +  G+SP    Y  +I          
Sbjct: 460 ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 519

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A A F+ ++  G++P    +N L+  + K G+   AE +   M+ SG  P   TY+++I
Sbjct: 520 HALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMI 579

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +++    RWE  + +L +M+      N   Y+ +       G  ++     + M++ G++
Sbjct: 580 NSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLK 632

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P     N +I+ FG+      A +    M    ++PD +T+ TL+    +  ++D+   +
Sbjct: 633 PSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAV 692

Query: 498 FEEMQERGYFP 508
           +EEM   G  P
Sbjct: 693 YEEMTLSGCTP 703



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 18/222 (8%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKM 219
            Y+++I   G+   L  A     R R+       +T+N LI    ++    KA  L   M
Sbjct: 504 FYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAM 563

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC--DKIELDGQLLNDVIVGFAK 277
           ++ G       Y+++I S            Q+ +++++    K++  G L N  +V +  
Sbjct: 564 QESGCSPCTTTYNIMINSFGE---------QERWEDVKTLLGKMQSQGLLAN--VVTYTT 612

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G + +A+    + +  GL P      ++I A     R  EA +V + +KE+ LKP    
Sbjct: 613 LGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVT 672

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           Y  L+K  +++        V  EM  SG  PD    ++L  A
Sbjct: 673 YTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSA 714


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  904 bits (2337), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/682 (66%), Positives = 539/682 (79%), Gaps = 37/682 (5%)

Query: 2   ILLPPQPLSVRFPAIHSACPI-TRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSK 60
           +LL PQPL  RFP+I    PI   HH I QP  + +  T   TAT   +SSF    ++ +
Sbjct: 1   MLLFPQPLPNRFPSISITSPIFQHHHRILQPQLAATPTTTALTATNLTDSSFP---YSKR 57

Query: 61  QNDTEEEEEDDDDV--------LSLQKQRYDFTPLLNFLSEN-SNSESASALASSPSSLN 111
            ++T + + +D           L LQ  RYDFTPL+N+LS   S S  + + ++SP+SL+
Sbjct: 58  HHETSQNDIEDYYNDDDDDDDILPLQSLRYDFTPLINYLSNKISTSTDSDSDSASPTSLD 117

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
             EF+LAESYR VP PLWHSLLK+LC+S+SSI LAYAVVSWLQKHNLC+SYELLYSILIH
Sbjct: 118 STEFQLAESYRVVPGPLWHSLLKSLCTSSSSIPLAYAVVSWLQKHNLCFSYELLYSILIH 177

Query: 172 ALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           ALG+SEKLYEAFLLSQ+Q LTPLTYNALISACARN+D+EKALNL+ +MR+DGY  D +NY
Sbjct: 178 ALGQSEKLYEAFLLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNY 237

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           SL+I+SL + N+ +SS+LQK+Y+EI+ DK+E+D QL ND+IVGFAKAGD  KA+ FLG+ 
Sbjct: 238 SLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVV 297

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           QG GLS KTAT   VI  L N GRT EAEA+FEE++++GL+PRT+AYNALL+GYVK G L
Sbjct: 298 QGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLL 357

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           +DAEFVVSEMERSGVLP+E TYSLLIDAY NA RWESARIVLKEME S+ +PN++++SRI
Sbjct: 358 RDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRI 417

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           LA YRD+GEWQ+TFQVL+EM+ SGV PD  FYNV+IDTFGK+NCL HAMA FDRMLSEGI
Sbjct: 418 LASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGI 477

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           EPDTITWNTL+DCH K G++DRAEELFEEM E+GY PC TT+NIMIN  G+QERW+DVK 
Sbjct: 478 EPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKN 537

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------------------- 569
           LL NMR+QGLLPN VTYTTL+DIYG+SGRFDDAIECL+                      
Sbjct: 538 LLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYA 597

Query: 570 --GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             GLSDQAV+AF  MR DGLKPS LALNSLINAFG+D+RD EAF VLQYMKEN LKPDVV
Sbjct: 598 QRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVV 657

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           TYTTLMKALI V+KF KV S Y
Sbjct: 658 TYTTLMKALILVEKFDKVPSVY 679



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 193/425 (45%), Gaps = 7/425 (1%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYE 181
           V   LW+ ++     +   +D A   +  +Q   L      L +++  +   GR+E+   
Sbjct: 269 VDVQLWNDIIVGFAKA-GDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEA 327

Query: 182 AFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   +   L P T  YNAL+    +   L  A  ++S+M + G   +   YSL+I +  
Sbjct: 328 IFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYG 387

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
              + +S+ +  + KE+E   ++ +  + + ++  +   G+  K  + L   +  G+ P 
Sbjct: 388 NAERWESARI--VLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPD 445

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
              Y  +I           A A F+ +   G++P T  +N L+  + K G    AE +  
Sbjct: 446 RIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFE 505

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G LP   T++++I+++ +  RW+  + +L  M      PN+  Y+ ++  Y   G
Sbjct: 506 EMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSG 565

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
            +    + L +MK++G++P +  YN +++ + +      A++AF  M  +G++P  +  N
Sbjct: 566 RFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALN 625

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LI+   K  R   A  + + M+E    P   TY  ++  L   E+++ V  +   M   
Sbjct: 626 SLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILS 685

Query: 540 GLLPN 544
           G  P+
Sbjct: 686 GCTPD 690



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 94/205 (45%), Gaps = 3/205 (1%)

Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           R+E+L+E  ++ +       T+N +I++    +  +   NL++ MR  G   + + Y+ +
Sbjct: 499 RAEELFEE-MMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTL 557

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I    ++ + D ++  +   +++   ++    + N ++  +A+ G + +A+      +  
Sbjct: 558 IDIYGKSGRFDDAI--ECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDD 615

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P      ++I A     R +EA  V + +KE+ LKP    Y  L+K  + +      
Sbjct: 616 GLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKV 675

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDA 379
             V  EM  SG  PD    ++L  A
Sbjct: 676 PSVYEEMILSGCTPDRKARAMLRSA 700


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/686 (66%), Positives = 542/686 (79%), Gaps = 54/686 (7%)

Query: 11  VRFPAIH-SACPITRHHV----IFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTE 65
            RFPA H S+ P+  HH     I     S S  +   T+++S  + ++SS       D  
Sbjct: 11  TRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPATSSSSLVTCYTSS-------DNL 63

Query: 66  EEEEDDDDVLSLQKQRYDFTPLLNFLSENS-----NSESASAL-------------ASSP 107
           E +  ++D +SLQ +RYDFTPLL+FLS +S     +S+S S +              +SP
Sbjct: 64  EFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSDSDTASP 123

Query: 108 SSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS 167
           +SL+  EF+LAE+YRAVPAPLWHSLLK+LCSS+SSI L YAVVSWLQ+HNLC+SYELLYS
Sbjct: 124 TSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFSYELLYS 183

Query: 168 ILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           ILIHALGRSEKLYEAF+LSQ+Q LTPLTYNALI ACARN+DLEKALNLMS+MRQDG+  D
Sbjct: 184 ILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSD 243

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
           FINYSL+IQSLTRTNKID  LLQKLY+EIE DKIELDG LLND+I+GFAKAGD ++A+ F
Sbjct: 244 FINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYF 303

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L M Q  GL+PKT+T+ AVI+AL N GRT EAEA+FEE+KE GLKPR KA+NALLKGY +
Sbjct: 304 LSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAR 363

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G LK+AE ++SEME+SG+ PDEHTY LL+DAYAN GRWESAR +LK+ME  + +PN+FI
Sbjct: 364 KGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFI 423

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           +SRILA YRDRGEWQ+TF+VL+EMK+S V+PD HFYNVMIDTFGK+NCL HAM  +DRML
Sbjct: 424 FSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRML 483

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           SEGIEPD +TWNTLIDCH K G +DRA ELFEEMQERGY PC TTYNIMIN LGEQE+W+
Sbjct: 484 SEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWD 543

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------ 569
           +VK LLG M++QGLLPNVVTYTTLVDIYG SGRF+DAI+CLE                  
Sbjct: 544 EVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALI 603

Query: 570 ------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                 GLS+QAVNA+RVM +DGL+PS LALNSLINAFGED+RD EAF++LQYMKEN +K
Sbjct: 604 NAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVK 663

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           PDVVTYTTLMKALIRVDKF KV + Y
Sbjct: 664 PDVVTYTTLMKALIRVDKFDKVPAVY 689



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 171/373 (45%), Gaps = 4/373 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR+E+    F   +   L P    +NAL+   AR   L++A +++S+M + G   D   Y
Sbjct: 330 GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTY 389

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
            L++ +     + +S+  + L K++E   ++ +  + + ++  +   G+  K    L   
Sbjct: 390 GLLVDAYANVGRWESA--RHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +   + P    Y  +I           A   ++ +   G++P    +N L+  + K GY 
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYH 507

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  +  EM+  G LP   TY+++I++     +W+  +I+L +M+     PN   Y+ +
Sbjct: 508 DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +  Y   G +      L+ MKS+G++P    YN +I+ F +      A+ A+  M+S+G+
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGL 627

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P  +  N+LI+   +  R   A  + + M+E    P   TY  ++  L   ++++ V  
Sbjct: 628 RPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPA 687

Query: 532 LLGNMRAQGLLPN 544
           +   M   G  P+
Sbjct: 688 VYEEMILSGCTPD 700



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 5/206 (2%)

Query: 175 RSEKLYEAFLLSQRQRL-TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           R+ +L+E   + +R  L  P TYN +I++    +  ++   L+ KM+  G   + + Y+ 
Sbjct: 509 RAAELFEE--MQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTT 566

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           ++     + + + ++     + ++   ++    + N +I  FA+ G + +A+    +   
Sbjct: 567 LVDIYGHSGRFNDAI--DCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMIS 624

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            GL P      ++I A     R IEA ++ + +KE+ +KP    Y  L+K  +++     
Sbjct: 625 DGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDK 684

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDA 379
              V  EM  SG  PD    ++L  A
Sbjct: 685 VPAVYEEMILSGCTPDGKARAMLRSA 710


>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g42310, mitochondrial; Flags: Precursor
 gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
 gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  902 bits (2331), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/675 (68%), Positives = 541/675 (80%), Gaps = 32/675 (4%)

Query: 1   MILLPPQPL-SVRFPAIHSACPITRHHV-IFQPAFSVSTITGITTATASGESSFSSSSFT 58
           M+LL   PL S RF +++       HH   FQP   +S  +  T+A+    S  SSSS+ 
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPP--ISAFSATTSASLPSPSPSSSSSYF 58

Query: 59  SKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESA----SALASSPSSLNRVE 114
           S  N  +  EE+D++  S   +RYDF+PLL FLS     E A    S   +SP SLN VE
Sbjct: 59  SSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVE 118

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F L ESYRAVPAP WHSL+K+L SS SS+ LAYAVVSWLQKHNLC+SYELLYSILIHALG
Sbjct: 119 FDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALG 178

Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           RSEKLYEAFLLSQ+Q LTPLTYNALI ACARN+D+EKALNL++KMRQDGY  DF+NYSLV
Sbjct: 179 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           IQSLTR+NKIDS +L +LYKEIE DK+ELD QL+ND+I+GFAK+GD SKA++ LGMAQ  
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLS KTAT  ++I+AL++SGRT+EAEA+FEEL++SG+KPRT+AYNALLKGYVK G LKDA
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E +VSEME+ GV PDEHTYSLLIDAY NAGRWESARIVLKEME    +PNSF++SR+LAG
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +RDRGEWQ+TFQVLKEMKS GV+PD  FYNV+IDTFGK+NCL HAM  FDRMLSEGIEPD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +TWNTLIDCH K GR+  AEE+FE M+ RG  PC TTYNIMIN  G+QERW+D+KRLLG
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 538

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------G 570
            M++QG+LPNVVT+TTLVD+YG+SGRF+DAIECLE                        G
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           LS+QAVNAFRVM +DGLKPS LALNSLINAFGED+RDAEAFAVLQYMKENG+KPDVVTYT
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658

Query: 631 TLMKALIRVDKFHKV 645
           TLMKALIRVDKF KV
Sbjct: 659 TLMKALIRVDKFQKV 673



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I AL  S +  EA  L +  R   + P T  YNAL+    +   L+ A +++S+M + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I +     + +S+ +  + KE+E   ++ +  + + ++ GF   G+  K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARI--VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
             + L   + +G+ P    Y  VI           A   F+ +   G++P    +N L+ 
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K G    AE +   MER G LP   TY+++I++Y +  RW+  + +L +M+     P
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   ++ ++  Y   G +    + L+EMKS G++P +  YN +I+ + +      A+ AF
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M S+G++P  +  N+LI+   +  R   A  + + M+E G  P   TY  ++  L   
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           ++++ V  +   M   G  P+
Sbjct: 668 DKFQKVPVVYEEMIMSGCKPD 688



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 7/257 (2%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y+++I   G+   L  A      +LS+      +T+N LI    ++     A  +   M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G       Y+++I S     + D   +++L  +++   I  +      ++  + K+G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDD--MKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + A+  L   + VGL P +  Y A+I A +  G + +A   F  +   GLKP   A N
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 623

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+  + +     +A  V+  M+ +GV PD  TY+ L+ A     +++   +V +EM +S
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683

Query: 400 HAKPNSFIYSRILAGYR 416
             KP+    S + +  R
Sbjct: 684 GCKPDRKARSMLRSALR 700


>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/597 (73%), Positives = 501/597 (83%), Gaps = 28/597 (4%)

Query: 81  RYDFTPLLNFLSENSNSESA----SALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNL 136
           RYDF+PLL FLS     E A    S   +SP SLN VEF L ESYRAVPAP WHSL+K+L
Sbjct: 52  RYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVEFDLVESYRAVPAPYWHSLIKSL 111

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTY 196
            SS SS+ LAYAVVSWLQKHNLC+SYELLYSILIHALGRSEKLYEAFLLSQ+Q LTPLTY
Sbjct: 112 TSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTY 171

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           NALI ACARN+D+EKALNL++KMRQDGY  DF+NYSLVIQSLTR+NKIDS +L +LYKEI
Sbjct: 172 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 231

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E DK+ELD QL+ND+I+GFAK+GD SKA++ LGMAQ  GLS KTAT  ++I+AL++SGRT
Sbjct: 232 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 291

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +EAEA+FEEL++SG+KPRT+AYNALLKGYVK G LKDAE +VSEME+ GV PDEHTYSLL
Sbjct: 292 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 351

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           IDAY NAGRWESARIVLKEME    +PNSF++SR+LAG+RDRGEWQ+TFQVLKEMKS GV
Sbjct: 352 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 411

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +PD  FYNV+IDTFGK+NCL HAM  FDRMLSEGIEPD +TWNTLIDCH K GR+  AEE
Sbjct: 412 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 471

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +FE M+ RG  PC TTYNIMIN  G+QERW+D+KRLLG M++QG+LPNVVT+TTLVD+YG
Sbjct: 472 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 531

Query: 557 QSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNL 592
           +SGRF+DAIECLE                        GLS+QAVNAFRVM +DGLKPS L
Sbjct: 532 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 591

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ALNSLINAFGED+RDAEAFAVLQYMKENG+KPDVVTYTTLMKALIRVDKF KV   Y
Sbjct: 592 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 648



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I AL  S +  EA  L +  R   + P T  YNAL+    +   L+ A +++S+M + G
Sbjct: 281 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 340

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I +     + +S+ +  + KE+E   ++ +  + + ++ GF   G+  K
Sbjct: 341 VSPDEHTYSLLIDAYVNAGRWESARI--VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 398

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
             + L   + +G+ P    Y  VI           A   F+ +   G++P    +N L+ 
Sbjct: 399 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 458

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K G    AE +   MER G LP   TY+++I++Y +  RW+  + +L +M+     P
Sbjct: 459 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 518

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   ++ ++  Y   G +    + L+EMKS G++P +  YN +I+ + +      A+ AF
Sbjct: 519 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 578

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M S+G++P  +  N+LI+   +  R   A  + + M+E G  P   TY  ++  L   
Sbjct: 579 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 638

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           ++++ V  +   M   G  P+
Sbjct: 639 DKFQKVPVVYEEMIMSGCKPD 659



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 112/245 (45%), Gaps = 7/245 (2%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y+++I   G+   L  A      +LS+      +T+N LI    ++     A  +   M
Sbjct: 417 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 476

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G       Y+++I S     + D   +++L  +++   I  +      ++  + K+G
Sbjct: 477 ERRGCLPCATTYNIMINSYGDQERWDD--MKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 534

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + A+  L   + VGL P +  Y A+I A +  G + +A   F  +   GLKP   A N
Sbjct: 535 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 594

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+  + +     +A  V+  M+ +GV PD  TY+ L+ A     +++   +V +EM +S
Sbjct: 595 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 654

Query: 400 HAKPN 404
             KP+
Sbjct: 655 GCKPD 659


>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 696

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/673 (67%), Positives = 530/673 (78%), Gaps = 32/673 (4%)

Query: 1   MILLPPQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSK 60
           M LLPPQ  +  FP+I  +  +T  H    P                     +++  T+K
Sbjct: 1   MFLLPPQLTTAPFPSI--SIHVTHFHF---PTTHHRHNHNHNHNHVLPPPQSTANPITAK 55

Query: 61  QNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAES 120
                  EE  DD+LS   +RYDFTPLL FLS  S +  + + ++ P+SL   EF+LAES
Sbjct: 56  PIIL---EEGPDDILSFHNRRYDFTPLLTFLSNPSTTSDSDSNSTPPTSLGSTEFQLAES 112

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           YRAVPAPLWH+LLK+LCSS+SSI LAYAVVSWLQKHNLC+SYELLYSILI+ALGRSEKLY
Sbjct: 113 YRAVPAPLWHALLKSLCSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINALGRSEKLY 172

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           EAFLLSQRQ LTPLTYNALI ACARN D+EKALNLMSKMR+DGY  DF+NYS +IQ LTR
Sbjct: 173 EAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTR 232

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +NKIDS +LQKLY EIE DKIE+DG L+ND+I+GF+KAGD ++AMRFL MAQ  GL+PK 
Sbjct: 233 SNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKP 292

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +T  AVI AL NSGRT EAEA+FEE++E+G +PRT+AYNALLKGYVK G LKDAEFVVSE
Sbjct: 293 STLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSE 352

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ME++GV PDE TYSLLIDAYA+AGRWESARIVLKEME S+ +PNS++YSRILA YRD+GE
Sbjct: 353 MEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGE 412

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           WQ++FQVLK+MKS+GV+PD HFYNVMIDTFGKYNCL HAMA F+RMLSEGI PDT+TWNT
Sbjct: 413 WQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNT 472

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI+CH K GR++ AEELF EMQ+RGY PC TTYNIMIN +GEQ+RWE V   L  M++QG
Sbjct: 473 LINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQG 532

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAV 576
           LLPN +TYTTLVD+YG+SGRF DAIECLE                        GLS+ AV
Sbjct: 533 LLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAV 592

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           NAFR+M T+GL PS LALNSLINAFGED+RDAEAFAVLQYMKEN ++PDVVTYTTLMKAL
Sbjct: 593 NAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKAL 652

Query: 637 IRVDKFHKVFSSY 649
           IRV+KF KV + Y
Sbjct: 653 IRVEKFQKVPAVY 665



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 179/381 (46%), Gaps = 7/381 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLT---PLT--YNALISACARNDDLEKALNLMSKMRQDG 223
           +I ALG S + +EA  L +  R     P T  YNAL+    +   L+ A  ++S+M + G
Sbjct: 298 VILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAG 357

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   YSL+I +     + +S+ +  + KE+E   +E +  + + ++  +   G+  K
Sbjct: 358 VKPDEQTYSLLIDAYAHAGRWESARI--VLKEMEASNVEPNSYVYSRILASYRDKGEWQK 415

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           + + L   +  G+ P    Y  +I           A A FE +   G++P T  +N L+ 
Sbjct: 416 SFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIN 475

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            + K G    AE +  EM++ G  P   TY+++I++     RWE   + L +M+     P
Sbjct: 476 CHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLP 535

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           NS  Y+ ++  Y   G +    + L+ +KS+G +P +  YN +I+ + +      A+ AF
Sbjct: 536 NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF 595

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M +EG+ P  +  N+LI+   +  R   A  + + M+E    P   TY  ++  L   
Sbjct: 596 RLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRV 655

Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
           E+++ V  +   M   G  P+
Sbjct: 656 EKFQKVPAVYEEMVTSGCTPD 676



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR     E F   Q++  +P   TYN +I++       E+    +SKM+  G   + I Y
Sbjct: 481 GRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITY 540

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    ++ +   ++  +  + ++    +    + N +I  +A+ G +  A+    + 
Sbjct: 541 TTLVDVYGKSGRFSDAI--ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLM 598

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              GL+P      ++I A     R  EA AV + +KE+ ++P    Y  L+K  +++   
Sbjct: 599 TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKF 658

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           +    V  EM  SG  PD    ++L  A
Sbjct: 659 QKVPAVYEEMVTSGCTPDRKARAMLRSA 686


>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 675

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/596 (52%), Positives = 416/596 (69%), Gaps = 32/596 (5%)

Query: 81  RYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSN 140
           RYDF PLL +LS  SN  S ++ +     +   E +LA SY AVP+  WH+LL+ L +S+
Sbjct: 46  RYDFEPLLAYLSAPSNVASLTSPSPP-PCVPAPERRLAASYAAVPSHEWHALLRGLAASD 104

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLT 195
           +S+ LA+A++ +LQ+H LC+  +LL S LIH+L  S +L    LL     S     +PL 
Sbjct: 105 ASLPLAFALLPFLQRHRLCFPLDLLLSSLIHSLSVSGRLLPHSLLLSFPPSLSDPPSPLL 164

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYK 254
            N+L++A A       AL L++ +R+ G+  D  +YS ++ SL  T +  D+++L++L  
Sbjct: 165 LNSLLAASAAASRPAIALRLLALIREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLG 224

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL  +G
Sbjct: 225 DLRESRLEPDAPLFSDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAG 284

Query: 315 RTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R  EAEA+F E   +G +KPRT+AYNALLKGYVK+G LK+AE V+ EM   GV PDE TY
Sbjct: 285 RVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATY 344

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           SLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+EM +
Sbjct: 345 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA 404

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SGV+PD HFYNVMIDTFGKYNCL HAM AF+RM  EGIEPD +TWNTLID H K GR+DR
Sbjct: 405 SGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDR 464

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELFEEM+E    P TTTYNIMINLLGEQERW  V+ +L  M+ QGL+PN++TYTTLVD
Sbjct: 465 AMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVD 524

Query: 554 IYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKP 589
           +YG+SGRF +AIEC+E                        GL+D A+N  + MR DGL+ 
Sbjct: 525 VYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEA 584

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           S + LNSL+NAFGED+R  EAF+VLQ+MKEN L+PDV+TYTTLMKALIR+++F KV
Sbjct: 585 STVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKV 640



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 8/384 (2%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI ALG + ++ EA      F L+   +     YNAL+    +   L+ A  ++ +M 
Sbjct: 274 TALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 333

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   GD
Sbjct: 334 DCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGD 391

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G+ P    Y  +I           A   F  ++E G++P    +N 
Sbjct: 392 WQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNT 451

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S   P   TY+++I+      RW     +L EM+   
Sbjct: 452 LIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQG 511

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++   + ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 512 LVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHAL 571

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E  T+  N+L++   +  R   A  + + M+E    P   TY  ++  L
Sbjct: 572 NVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKAL 631

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E+++ V  +   M   G  P+
Sbjct: 632 IRIEQFDKVPVIYEEMITSGCAPD 655



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR ++  E F   +     P   TYN +I+     +       ++S+M++ G   + I Y
Sbjct: 460 GRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITY 519

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    R+ +   ++  +  + ++ D ++    + + ++  +A+ G A  A+  +   
Sbjct: 520 TTLVDVYGRSGRFKEAI--ECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 577

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL   T    +++ A     R +EA +V + +KE+ L+P    Y  L+K  +++   
Sbjct: 578 RADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQF 637

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDA 379
                +  EM  SG  PD    ++L  A
Sbjct: 638 DKVPVIYEEMITSGCAPDRKARAMLRSA 665



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLY--EAFLLSQR-QRLTP--LTYNALISACARNDDLEKAL 213
           C      Y+I+I+ LG  E+    E  L   + Q L P  +TY  L+    R+   ++A+
Sbjct: 477 CPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAI 536

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
             +  M+ DG       Y  ++ +  +    D +L   + K +  D +E    +LN ++ 
Sbjct: 537 ECIEVMKADGLKPSPTMYHALVNAYAQRGLADHAL--NVVKAMRADGLEASTVVLNSLMN 594

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            F +     +A   L   +   L P   TY  ++ AL    +  +   ++EE+  SG  P
Sbjct: 595 AFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAP 654

Query: 334 RTKAYNALLKGYVKMGYLKDA 354
             KA   L      M Y K A
Sbjct: 655 DRKARAMLRSALRYMKYTKVA 675


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/596 (52%), Positives = 420/596 (70%), Gaps = 32/596 (5%)

Query: 81  RYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSN 140
           RYDF PLL +LS  S + S ++ +   +S+   E +LA +Y AVP+  WH+LL++L +S+
Sbjct: 39  RYDFEPLLAYLSSPSVAASLTSPSPP-ASVPAPEHRLAATYSAVPSHEWHALLRDLAASD 97

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLT 195
           +S+ +A+A++ +L +H LC+  +LL S L+H+L  S +L    LL     S     +PL 
Sbjct: 98  ASLPVAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLL 157

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYK 254
            N+L++A A       AL L+S +R+  +  D  +YS ++ SL  T +  D++LL++L  
Sbjct: 158 LNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLG 217

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL ++G
Sbjct: 218 DLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAG 277

Query: 315 RTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R  EAEA+F E   +G +KPRT+AYNALLKGYV++G LK+AE V+ EM + GV PDE TY
Sbjct: 278 RVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATY 337

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           SLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+EM++
Sbjct: 338 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA 397

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SGV PD HFYNVMIDTFGKYNCL HAM AFDRM  E IEPD +TWNTLID H K GR+DR
Sbjct: 398 SGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDR 457

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELFEEM+E    P TTTYNIMINLLGEQERWE V+ +L  M+ QGL+PN++TYTTLVD
Sbjct: 458 AMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVD 517

Query: 554 IYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKP 589
           +YG+SGR+ +AI+C+E                        GL+D A+N  + M+ DGL+ 
Sbjct: 518 VYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEV 577

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           S L LNSLINAFGED+R  EAF+VLQ+MKENGL+PDV+TYTTLMKALIRV++F KV
Sbjct: 578 SILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKV 633



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 210/477 (44%), Gaps = 11/477 (2%)

Query: 74  VLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLL 133
           +LSL ++ +DF P L   S    S   +      + L R+   L ES     APL+  L+
Sbjct: 177 LLSLLRE-HDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLI 235

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA------FLLSQ 187
                + +  D A  +++  Q   L      + + LI ALG + ++ EA      F L+ 
Sbjct: 236 SAFARA-ALPDAALELLASAQAIGLTPRSNAV-TALISALGSAGRVAEAEALFLEFFLAG 293

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
             +     YNAL+    R   L+ A  ++ +M Q G   D   YSL++ + TR  + +S+
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
            +  L KE+E D ++    + + ++ GF   GD  KA   L   Q  G+ P    Y  +I
Sbjct: 354 RI--LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMI 411

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                      A   F+ ++E  ++P    +N L+  + K G    A  +  EM  S   
Sbjct: 412 DTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCP 471

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P   TY+++I+      RWE    +L EM+     PN   Y+ ++  Y   G ++     
Sbjct: 472 PGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           ++ MK+ G++P    Y+ +++ + +     HA+     M ++G+E   +  N+LI+   +
Sbjct: 532 IEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGE 591

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             R   A  + + M+E G  P   TY  ++  L   E+++ V  +   M   G  P+
Sbjct: 592 DRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 648



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR ++  E F   +     P   TYN +I+     +  E    ++S+M++ G   + I Y
Sbjct: 453 GRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITY 512

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    R+ +   ++     + ++ D ++    + + ++  +A+ G A  A+  +   
Sbjct: 513 TTLVDVYGRSGRYKEAI--DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 570

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL        ++I A     R +EA +V + +KE+GL+P    Y  L+K  +++   
Sbjct: 571 KADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQF 630

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDA 379
                +  EM  SG  PD    ++L  A
Sbjct: 631 DKVPVIYEEMITSGCAPDRKARAMLRSA 658



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 9/231 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  E+    EA L  
Sbjct: 442 WNTLIDAHCKGGRH-DRAMELFEEMRESN-CPPGTTTYNIMINLLGEQERWEGVEAMLSE 499

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K ++ D +E+   +LN +I  F +     +A   L   +  GL P   TY
Sbjct: 560 ADHAL--NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITY 617

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
             ++ AL    +  +   ++EE+  SG  P  KA   L      M +++ A
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 668


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/600 (52%), Positives = 419/600 (69%), Gaps = 32/600 (5%)

Query: 77  LQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNL 136
           +   RYDF PLL +LS  S S S ++ +   +S+   E +LA SY AVP+  WH+LL++L
Sbjct: 35  IPASRYDFEPLLAYLSSPSVSASLTSPSPP-ASVPAPEHRLAASYSAVPSHEWHALLRDL 93

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRL 191
            +S+ S+ LA+A++ +L +H LC+  +LL S L+H+L  S +L    LL     S     
Sbjct: 94  AASDVSLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPP 153

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQ 250
           +PL  N+L++A A       AL L+S +R+  +  D  +YS ++ SL  T +  D++LL+
Sbjct: 154 SPLLLNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLE 213

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L  ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL
Sbjct: 214 RLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISAL 273

Query: 311 SNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             +GR  EAEA+F E   +G +KPRT+AYNALLKGYV++G LK+AE V+ EM + GV PD
Sbjct: 274 GTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPD 333

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E TYSLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+
Sbjct: 334 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 393

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM++SGV PD HFYNVMIDTFGKYNCL HAM AF++M  EGIEPD +TWNTLID H K G
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGG 453

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R+DRA ELFEEM+E    P TTTYNIMINLLGEQE WE V+ +L  M+ QGL+PN++TYT
Sbjct: 454 RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYT 513

Query: 550 TLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTD 585
           TLVD+YG+SGR+ +AI+C+E                        GL+D A+N  + M+ D
Sbjct: 514 TLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD 573

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL+ S L LNSLINAFGED+R  EAF+VLQ+M+ENGL+PDV+TYTTLMKALIRV++F KV
Sbjct: 574 GLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKV 633



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 173/384 (45%), Gaps = 8/384 (2%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI ALG + ++ EA      F L+   +     YNAL+    R   L+ A  ++ +M 
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   GD
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGD 384

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L   Q  G+ P    Y  +I           A   F +++E G++P    +N 
Sbjct: 385 WQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNT 444

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S   P   TY+++I+       WE    +L EM+   
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 564

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E   +  N+LI+   +  R   A  + + M+E G  P   TY  ++  L
Sbjct: 565 NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E+++ V  +   M   G  P+
Sbjct: 625 IRVEQFDKVPVIYEEMITSGCAPD 648



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  E     EA L  
Sbjct: 442 WNTLIDAHCKGGRH-DRAAELFEEMRESN-CPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K ++ D +E+   +LN +I  F +     +A   L   +  GL P   TY
Sbjct: 560 ADHAL--NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITY 617

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG--YVK 347
             ++ AL    +  +   ++EE+  SG  P  KA   L  G  Y+K
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIK 663


>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/600 (51%), Positives = 419/600 (69%), Gaps = 32/600 (5%)

Query: 77  LQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNL 136
           +   RYDF PLL +LS  S S S ++ +   +S+   E +LA SY AVP+  WH+LL++L
Sbjct: 35  IPASRYDFEPLLAYLSSPSVSASLTSPSPP-ASVPAPEHRLAASYSAVPSHEWHALLRDL 93

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRL 191
            +S++S+ LA+A++ +L +H LC+  +LL S L+H+L  S +L    LL     S     
Sbjct: 94  AASDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPP 153

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQ 250
           +PL  N+L++A A       AL L+S +R+  +  D  +YS ++ SL  T +  D++LL+
Sbjct: 154 SPLLLNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLE 213

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L  ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL
Sbjct: 214 RLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISAL 273

Query: 311 SNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             +GR  EAEA+F E   +G +KPRT+AYNALLKGYV++  LK+AE V+ EM + GV PD
Sbjct: 274 GTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPD 333

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E TYSLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+
Sbjct: 334 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 393

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM++SGV PD HFYNVMIDTFGKYNCL HAM AF++M  EGIEPD +TWNTLID H K G
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGG 453

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R+DRA ELFEEM+E    P TTTYNIMINLLGEQE WE V+ +L  M+ QGL+PN++TYT
Sbjct: 454 RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYT 513

Query: 550 TLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTD 585
           TLVD+YG+SGR+ +AI+C+E                        GL+D A+N  + M+ D
Sbjct: 514 TLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD 573

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL+ S L LNSLINAFGED+R  EAF+VLQ+M+ENGL+PDV+TYTTLMKALIRV++F KV
Sbjct: 574 GLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKV 633



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 173/384 (45%), Gaps = 8/384 (2%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI ALG + ++ EA      F L+   +     YNAL+    R   L+ A  ++ +M 
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   GD
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGD 384

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L   Q  G+ P    Y  +I           A   F +++E G++P    +N 
Sbjct: 385 WQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNT 444

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S   P   TY+++I+       WE    +L EM+   
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 564

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E   +  N+LI+   +  R   A  + + M+E G  P   TY  ++  L
Sbjct: 565 NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKAL 624

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E+++ V  +   M   G  P+
Sbjct: 625 IRVEQFDKVPVIYEEMITSGCAPD 648



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  E     EA L  
Sbjct: 442 WNTLIDAHCKGGRH-DRAAELFEEMRESN-CPPGTTTYNIMINLLGEQEHWEGVEAMLSE 499

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 500 MKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL 559

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K ++ D +E+   +LN +I  F +     +A   L   +  GL P   TY
Sbjct: 560 ADHAL--NVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITY 617

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG--YVK 347
             ++ AL    +  +   ++EE+  SG  P  KA   L  G  Y+K
Sbjct: 618 TTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIK 663


>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 308/596 (51%), Positives = 413/596 (69%), Gaps = 32/596 (5%)

Query: 81  RYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSN 140
           RYDF PLL +LS+ S   S ++ +    S+   E +LA SY AVP+  WH+LL+ L +S+
Sbjct: 44  RYDFEPLLAYLSDPSTVASLTSPSPP-PSVPAPERRLAASYSAVPSHEWHALLRGLAASD 102

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLT 195
           +S+ LA+A++ +LQ+H LC+  +LL S LIH+L  S +L    LL     S     +PL 
Sbjct: 103 ASLPLAFALLPFLQRHRLCFPLDLLLSSLIHSLSVSGRLLPHSLLLSFPPSLSDPPSPLL 162

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYK 254
            N+L++A A       AL L++ +R+  +  D  +YS ++ SL  T +  D+++L++L  
Sbjct: 163 LNSLLAASAAASRPAIALRLLALIREHNFLPDLASYSHLLASLLNTRDPPDAAILERLLG 222

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL  +G
Sbjct: 223 DLRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAG 282

Query: 315 RTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R  EAEA+F E   +G +KPRT+AYNALLKGYVK+G LK+AE V+ EM   GV PDE TY
Sbjct: 283 RVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATY 342

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           SLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+EM +
Sbjct: 343 SLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA 402

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SGV+PD HFYNVMIDTFGKYNCL HAM  F+RM  EGIEPD +TWNTLID H K GR+D 
Sbjct: 403 SGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDC 462

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELF+EM+E    P TTTYNIMINLLGEQERW  V+ ++  M+ QGL+PN++TYTTLVD
Sbjct: 463 AMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVD 522

Query: 554 IYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKP 589
           +YG+SGR+ +AI+C+E                        GL+D A+N  + MR DGL+ 
Sbjct: 523 VYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEA 582

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           S + LNSLINAFGED+R  EAF+VLQ+MKEN  +PDV+TYTTLMKALIRV++F KV
Sbjct: 583 STVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKV 638



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 172/384 (44%), Gaps = 8/384 (2%)

Query: 167 SILIHALG------RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI ALG       +E L+  F L+   +     YNAL+    +   L+ A +++ +M 
Sbjct: 272 TALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMS 331

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   GD
Sbjct: 332 ECGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGD 389

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G+ P    Y  +I           A  VF  ++  G++P    +N 
Sbjct: 390 WQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNT 449

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S   P   TY+++I+      RW     ++ EM+   
Sbjct: 450 LIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQG 509

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 510 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 569

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E  T+  N+LI+   +  R   A  + + M+E  + P   TY  ++  L
Sbjct: 570 NVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKAL 629

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E+++ V  +   M   G  P+
Sbjct: 630 IRVEQFDKVPVIYEEMITSGCAPD 653



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 2/185 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN +I+     +       +MS+M++ G   + I Y+ ++    R+ +   ++     +
Sbjct: 481 TYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI--DCIE 538

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++ D ++    + + ++  +A+ G A  A+  +   +  GL   T    ++I A     
Sbjct: 539 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDR 598

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R +EA +V + +KE+  +P    Y  L+K  +++        +  EM  SG  PD    +
Sbjct: 599 RVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARA 658

Query: 375 LLIDA 379
           +L  A
Sbjct: 659 MLRSA 663


>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
 gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
          Length = 661

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/563 (53%), Positives = 397/563 (70%), Gaps = 31/563 (5%)

Query: 114 EFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           E +LA SY AVPA  WH+LL+ L ++++S+ LA+A++ +L +H LC+  +LL S L+H+L
Sbjct: 64  ESRLAASYAAVPAREWHALLRELAATDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSL 123

Query: 174 GRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
             S +L    LL     S     +PL  N+L++A A       AL L+  +R+  +  D 
Sbjct: 124 SVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLGLLREHSFLPDL 183

Query: 229 INYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +YS ++ SL  T +  D++LL +L  ++   ++E D  L +D+I  FA+A     A+  
Sbjct: 184 ASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALEL 243

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYV 346
           L  AQ +GL+P++    A+I++L ++ R  EAEA+F E   +G +KPRT+AYNALLKGYV
Sbjct: 244 LASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYV 303

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K+G LK+AE V+ EM + GV PDE TYSLL+DAY  AGRWESARI+LKEME    KP+S+
Sbjct: 304 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 363

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++SRILAG+RDRGEWQ+ F VL+EM +SGV PD HFYNVMIDTFGKYNCL HAM AFDRM
Sbjct: 364 VFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRM 423

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             EGIEPD +TWNTLID H K GR+DRA ELF+EM+E      TTTYNIMINLLGE++RW
Sbjct: 424 REEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRW 483

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----------------- 569
           E V+ +L  M+ QGL+PN++TYTTLVD+YG+SGRF +A++C+E                 
Sbjct: 484 EGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHAL 543

Query: 570 -------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                  GL+D A+N  + MR DGL+ S + LNSLINAFGED+R AEAF+VLQ+MKENGL
Sbjct: 544 VNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGL 603

Query: 623 KPDVVTYTTLMKALIRVDKFHKV 645
           +PDV+TYTTLMKALIRV++F KV
Sbjct: 604 RPDVITYTTLMKALIRVEQFEKV 626



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 8/384 (2%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI +LG + ++ EA      F L+   +     YNAL+    +   L+ A  ++ +M 
Sbjct: 260 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 319

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   G+
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGE 377

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G+ P    Y  +I           A   F+ ++E G++P    +N 
Sbjct: 378 WQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNT 437

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S       TY+++I+      RWE    +L EM+   
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 557

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E  T+  N+LI+   +  R   A  + + M+E G  P   TY  ++  L
Sbjct: 558 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E++E V  +   M   G  P+
Sbjct: 618 IRVEQFEKVPVIYEEMITSGCAPD 641



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           GR ++  E F    R+   PL   TYN +I+        E    ++++M++ G   + I 
Sbjct: 446 GRHDRAIELFD-EMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 504

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ ++    R+ +   ++     + ++ D ++    + + ++  +A+ G A  A+  +  
Sbjct: 505 YTTLVDVYGRSGRFKEAV--DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 562

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  GL   T    ++I A     R  EA +V + +KE+GL+P    Y  L+K  +++  
Sbjct: 563 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 622

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
            +    +  EM  SG  PD    ++L  A
Sbjct: 623 FEKVPVIYEEMITSGCAPDRKARAMLRSA 651



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 9/231 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  ++    EA L  
Sbjct: 435 WNTLIDAHCKGGRH-DRAIELFDEMRESN-CPLGTTTYNIMINLLGEEQRWEGVEAMLAE 492

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 493 MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K +  D +E    +LN +I  F +    ++A   L   +  GL P   TY
Sbjct: 553 ADHAL--NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 610

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
             ++ AL    +  +   ++EE+  SG  P  KA   L      M +++ A
Sbjct: 611 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 661


>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
          Length = 661

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/563 (52%), Positives = 396/563 (70%), Gaps = 31/563 (5%)

Query: 114 EFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           E +LA SY AVPA  WH+LL+ L ++++S+ LA+A++ +L +H LC+  +LL S L+H+L
Sbjct: 64  ESRLAASYAAVPAREWHALLRELAATDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSL 123

Query: 174 GRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
             S +L    LL     S     +PL  N+L++A A       AL L+  +R+  +  D 
Sbjct: 124 SVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLGLLREHSFLPDL 183

Query: 229 INYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +YS ++  L  T +  +++LL +L  ++   ++E D  L +D+I  FA+A     A+  
Sbjct: 184 ASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALEL 243

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYV 346
           L  AQ +GL+P++    A+I++L ++ R  EAEA+F E   +G +KPRT+AYNALLKGYV
Sbjct: 244 LASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYV 303

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K+G LK+AE V+ EM + GV PDE TYSLL+DAY  AGRWESARI+LKEME    KP+S+
Sbjct: 304 KIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 363

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++SRILAG+RDRGEWQ+ F VL+EM +SGV PD HFYNVMIDTFGKYNCL HAM AFDRM
Sbjct: 364 VFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRM 423

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             EGIEPD +TWNTLID H K GR+DRA ELF+EM+E      TTTYNIMINLLGE++RW
Sbjct: 424 REEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRW 483

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----------------- 569
           E V+ +L  M+ QGL+PN++TYTTLVD+YG+SGRF +A++C+E                 
Sbjct: 484 EGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHAL 543

Query: 570 -------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                  GL+D A+N  + MR DGL+ S + LNSLINAFGED+R AEAF+VLQ+MKENGL
Sbjct: 544 VNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGL 603

Query: 623 KPDVVTYTTLMKALIRVDKFHKV 645
           +PDV+TYTTLMKALIRV++F KV
Sbjct: 604 RPDVITYTTLMKALIRVEQFEKV 626



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 8/384 (2%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI +LG + ++ EA      F L+   +     YNAL+    +   L+ A  ++ +M 
Sbjct: 260 TALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 319

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   G+
Sbjct: 320 QCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGE 377

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G+ P    Y  +I           A   F+ ++E G++P    +N 
Sbjct: 378 WQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNT 437

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S       TY+++I+      RWE    +L EM+   
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +     HA+
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHAL 557

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M ++G+E  T+  N+LI+   +  R   A  + + M+E G  P   TY  ++  L
Sbjct: 558 NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKAL 617

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              E++E V  +   M   G  P+
Sbjct: 618 IRVEQFEKVPVIYEEMITSGCAPD 641



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           GR ++  E F    R+   PL   TYN +I+        E    ++++M++ G   + I 
Sbjct: 446 GRHDRAIELFD-EMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 504

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ ++    R+ +   ++     + ++ D ++    + + ++  +A+ G A  A+  +  
Sbjct: 505 YTTLVDVYGRSGRFKEAV--DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 562

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  GL   T    ++I A     R  EA +V + +KE+GL+P    Y  L+K  +++  
Sbjct: 563 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 622

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
            +    +  EM  SG  PD    ++L  A
Sbjct: 623 FEKVPVIYEEMITSGCAPDRKARAMLRSA 651



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 9/231 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  ++    EA L  
Sbjct: 435 WNTLIDAHCKGGRH-DRAIELFDEMRESN-CPLGTTTYNIMINLLGEEQRWEGVEAMLAE 492

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 493 MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGL 552

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K +  D +E    +LN +I  F +    ++A   L   +  GL P   TY
Sbjct: 553 ADHAL--NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 610

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
             ++ AL    +  +   ++EE+  SG  P  KA   L      M +++ A
Sbjct: 611 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMKHMRVA 661


>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 617

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/576 (50%), Positives = 394/576 (68%), Gaps = 35/576 (6%)

Query: 77  LQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNL 136
           +   RYDF PLL +LS  S S S ++ +   +S+   E +LA SY AVP+  WH+LL++L
Sbjct: 35  IPASRYDFEPLLAYLSSPSVSASLTSPSPP-ASVPAPEHRLAASYSAVPSHEWHALLRDL 93

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRL 191
            +S++S+ LA+A++ +L +H LC+  +LL S L+H+L  S +L    LL     S     
Sbjct: 94  AASDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPP 153

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQ 250
           +PL  N+L++A A       AL L+S +R+  +  D  +YS ++ SL  T +  D++LL+
Sbjct: 154 SPLLLNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLE 213

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L  ++   ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I+AL
Sbjct: 214 RLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISAL 273

Query: 311 SNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             +GR  EAEA+F E   +G +KPRT+AYNALLKGYV++  LK+AE V+ EM + GV PD
Sbjct: 274 GTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPD 333

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E TYSLL+DAY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRG+WQ+ F VL+
Sbjct: 334 EATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLR 393

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM++SGV PD HFYNVMIDTFGKYNCL HAM AF++M  EGIEPD +TWNTLID H K G
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGG 453

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R+DRA ELFEEM+E    P TTTYNIMINLLGEQE WE V+ +L  M+ QGL+PN++TYT
Sbjct: 454 RHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYT 513

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TLVD+YG+SGR+ +AI+C+E            M+ DGLKPS    ++L+NA+        
Sbjct: 514 TLVDVYGRSGRYKEAIDCIEA-----------MKADGLKPSPTMYHALVNAYA------- 555

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
                    + GL+PDV+TYTTLMKALIRV++F KV
Sbjct: 556 ---------QRGLRPDVITYTTLMKALIRVEQFDKV 582



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 24/348 (6%)

Query: 167 SILIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           + LI ALG + ++ EA      F L+   +     YNAL+    R   L+ A  ++ +M 
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   GD
Sbjct: 327 QCGVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGD 384

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L   Q  G+ P    Y  +I           A   F +++E G++P    +N 
Sbjct: 385 WQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNT 444

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G    A  +  EM  S   P   TY+++I+       WE    +L EM+   
Sbjct: 445 LIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++  Y   G ++     ++ MK+ G++P    Y+ +++ + +        
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ-------- 556

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                    G+ PD IT+ TL+    +  ++D+   ++EEM   G  P
Sbjct: 557 --------RGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 596



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 22/211 (10%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +I    + + L  A++  +KMR++G   D + ++ +I +  +  + D +   +L++E
Sbjct: 407 YNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRA--AELFEE 464

Query: 256 IECDKIELDGQLLNDVI--VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +            N +I  +G  +  +  +AM  L   +  GL P   TY  ++     S
Sbjct: 465 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAM--LSEMKEQGLVPNIITYTTLVDVYGRS 522

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA    E +K  GLKP    Y+AL+  Y +                 G+ PD  TY
Sbjct: 523 GRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQ----------------RGLRPDVITY 566

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + L+ A     +++   ++ +EM  S   P+
Sbjct: 567 TTLMKALIRVEQFDKVPVIYEEMITSGCAPD 597



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 12/178 (6%)

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           +EPD   ++ LI    +    D A EL    Q  G  P +     +I+ LG   R  + +
Sbjct: 224 LEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAE 283

Query: 531 RLLGNMRAQG-LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
            L       G + P    Y  L+  Y +     +A + L+ +S             G+ P
Sbjct: 284 ALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQC-----------GVAP 332

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
                + L++A+    R   A  +L+ M+ +G+KP    ++ ++        + K F+
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFA 390



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/178 (20%), Positives = 74/178 (41%), Gaps = 22/178 (12%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR ++  E F   +     P   TYN +I+     +  E    ++S+M++ G   + I Y
Sbjct: 453 GRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITY 512

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    R+ +   ++     + ++ D ++    + + ++  +A+ G            
Sbjct: 513 TTLVDVYGRSGRYKEAI--DCIEAMKADGLKPSPTMYHALVNAYAQRG------------ 558

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG--YVK 347
               L P   TY  ++ AL    +  +   ++EE+  SG  P  KA   L  G  Y+K
Sbjct: 559 ----LRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIK 612


>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
          Length = 528

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/411 (59%), Positives = 309/411 (75%), Gaps = 25/411 (6%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           ++E D  L +D+I  FA+A     A+  L  AQ +GL+P++    A+I++L ++ R  EA
Sbjct: 83  RLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEA 142

Query: 320 EAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           EA+F E   +G +KPRT+AYNALLKGYVK+G LK+AE V+ EM + GV PDE TYSLL+D
Sbjct: 143 EALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVD 202

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           AY  AGRWESARI+LKEME    KP+S+++SRILAG+RDRGEWQ+ F VL+EM +SGV P
Sbjct: 203 AYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRP 262

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D HFYNVMIDTFGKYNCL HAM AFDRM  EGIEPD +TWNTLID H K GR+DRA ELF
Sbjct: 263 DRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELF 322

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +EM+E      TTTYNIMINLLGE++RWE V+ +L  M+ QGL+PN++TYTTLVD+YG+S
Sbjct: 323 DEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRS 382

Query: 559 GRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLAL 594
           GRF +A++C+E                        GL+D A+N  + MR DGL+ S + L
Sbjct: 383 GRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVL 442

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           NSLINAFGED+R AEAF+VLQ+MKENGL+PDV+TYTTLMKALIRV++F KV
Sbjct: 443 NSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKV 493



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 173/382 (45%), Gaps = 8/382 (2%)

Query: 169 LIHALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQD 222
           LI +LG + ++ EA      F L+   +     YNAL+    +   L+ A  ++ +M Q 
Sbjct: 129 LISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQC 188

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   D   YSL++ + TR  + +S+ +  L KE+E D ++    + + ++ GF   G+  
Sbjct: 189 GVAPDEATYSLLVDAYTRAGRWESARI--LLKEMEADGVKPSSYVFSRILAGFRDRGEWQ 246

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KA   L      G+ P    Y  +I           A   F+ ++E G++P    +N L+
Sbjct: 247 KAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLI 306

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
             + K G    A  +  EM  S       TY+++I+      RWE    +L EM+     
Sbjct: 307 DAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV 366

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ ++  Y   G ++     ++ MK+ G++P +  Y+ +++ + +     HA+  
Sbjct: 367 PNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNV 426

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
              M ++G+E  T+  N+LI+   +  R   A  + + M+E G  P   TY  ++  L  
Sbjct: 427 VKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIR 486

Query: 523 QERWEDVKRLLGNMRAQGLLPN 544
            E++E V  +   M   G  P+
Sbjct: 487 VEQFEKVPVIYEEMITSGCAPD 508



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           GR ++  E F    R+   PL   TYN +I+        E    ++++M++ G   + I 
Sbjct: 313 GRHDRAIELFD-EMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIIT 371

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ ++    R+ +   ++     + ++ D ++    + + ++  +A+ G A  A+  +  
Sbjct: 372 YTTLVDVYGRSGRFKEAV--DCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKA 429

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  GL   T    ++I A     R  EA +V + +KE+GL+P    Y  L+K  +++  
Sbjct: 430 MRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 489

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
            +    +  EM  SG  PD    ++L  A
Sbjct: 490 FEKVPVIYEEMITSGCAPDRKARAMLRSA 518



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 12/229 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL--YEAFLLS 186
           W++L+   C      D A  +   +++ N C      Y+I+I+ LG  ++    EA L  
Sbjct: 302 WNTLIDAHCKGGRH-DRAIELFDEMRESN-CPLGTTTYNIMINLLGEEQRWEGVEAMLAE 359

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A++ +  M+ DG       Y  ++ +  +   
Sbjct: 360 MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGL 419

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K +  D +E    +LN +I  F +    ++A   L   +  GL P   TY
Sbjct: 420 ADHAL--NVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITY 477

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             ++ AL    +  +   ++EE+  SG  P  KA  A+L+  ++  Y+K
Sbjct: 478 TTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKA-RAMLRSALR--YMK 523


>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
 gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
          Length = 698

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/571 (39%), Positives = 341/571 (59%), Gaps = 29/571 (5%)

Query: 102 ALASSPSSLNRVEFKLA-ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCY 160
           AL  S    N +  K A E +R VP   WH LL+ LC S  S   A  ++ WL++++ C 
Sbjct: 83  ALLGSLERENAIGEKFAVEQFRKVPERAWHWLLQELCVSGRS-SFASELLEWLRENSFCR 141

Query: 161 SYELLYSILIHALGRSEKLYEAFLLSQR--QRLTPLTYNALISACARNDDLEKALNLMSK 218
           +Y++L S++IH  GR  KL++A  ++++    L    YNAL+ A A+N D  KAL  +SK
Sbjct: 142 TYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRGYNALVGAYAQNRDYGKALETLSK 201

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G+  D ++Y+ VIQ+  R   +D     +L++E++ + +++DG++ ND+I    +A
Sbjct: 202 MKTLGFPPDVVSYTHVIQA-CRHGVVDIYTGFRLFQEMQAEGVQVDGKVYNDLIFACGQA 260

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              ++ M FL   Q  GL     +Y +++ +L   GRT EAEA+ EE+K  GL+P  KAY
Sbjct: 261 HKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAY 320

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL GY + G L+  + V + +  +G+  ++ TY LLIDAYA AG  +    + +EM  
Sbjct: 321 NTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRD 380

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +PN+++Y+R++  YRD G+WQ+  ++L+EM+ +GV PD H YNV+I+TFG+   L  
Sbjct: 381 CDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQ 440

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A  AF +M   GIEPD ++WN+LID   K G+   A +L+ +M   G  P   T+NI+I+
Sbjct: 441 ARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIH 500

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE--------- 569
            LGE +RW DV  ++  MR++G+ PNVVTYTTLVD+Y Q+  F DA+ECL+         
Sbjct: 501 GLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGP 560

Query: 570 ---------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                          G+ +Q ++  + M  + ++ +   LN LINAF    R  EAFAV 
Sbjct: 561 SPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVF 620

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +Y+KE GL  D +TYTTLMKALIR +K  +V
Sbjct: 621 EYIKEAGLTADKITYTTLMKALIRAEKLDEV 651



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 9/385 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y  L+ +LG+  +  EA  L +  +   L      YN L+   +R   L++   + + +R
Sbjct: 285 YISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLR 344

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAG 279
             G   + I Y L+I +  R   +D   L+ LY+E+ +CD I  +  +   +I  +   G
Sbjct: 345 DTGMSINKITYCLLIDAYARAGLMDR--LEALYQEMRDCD-IRPNTYMYARMITIYRDTG 401

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              K ++ L   Q  G++P    Y  +I     + +  +A   F ++++ G++P   ++N
Sbjct: 402 QWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWN 461

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+    K G   +A  +  +M   G  P   T++++I       RW     +++EM   
Sbjct: 462 SLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSK 521

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   Y+ ++  Y     +Q   + L+ MK  G+ P    Y+ + + + +       
Sbjct: 522 GMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQT 581

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +     M  E IE +    N LI+     GR   A  +FE ++E G      TY  ++  
Sbjct: 582 LHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKA 641

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPN 544
           L   E+ ++V  +   M   G  P+
Sbjct: 642 LIRAEKLDEVSGVFDEMIKAGCRPD 666



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 38/254 (14%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+++I+  GR+ +L +A   F   Q   + P  +++N+LI AC +     +A  L  KM
Sbjct: 424 VYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKM 483

Query: 220 RQDGYHCDFINYSLVIQSL--------------------------TRTNKIDSSLLQKLY 253
             DG       +++VI  L                          T T  +D     +L+
Sbjct: 484 VNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLF 543

Query: 254 KE-IEC-DKIELDGQ-----LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++ +EC   ++ DG        + +   +A+ G   + +  L   +   +    A    +
Sbjct: 544 QDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLL 603

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A S +GR+ EA AVFE +KE+GL      Y  L+K  ++   L +   V  EM ++G 
Sbjct: 604 INAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGC 663

Query: 367 LPDEHTYSLLIDAY 380
            PD     +L  A+
Sbjct: 664 RPDGKAKDMLRSAF 677


>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 658

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/579 (37%), Positives = 331/579 (57%), Gaps = 35/579 (6%)

Query: 103 LASSPS-SLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYS 161
           L S+P  S N VE +L  S R +  P W      LC+S  S+     +++ L    +C S
Sbjct: 17  LESTPEPSTNSVE-ELLSSLRGLQLPEWRGTFIKLCTSKCSVT-TRKLLTLLISSAVCDS 74

Query: 162 --YELLYSILIHALGRSEKLYEAFLL-SQRQRLT----PLTYNALISACARNDDLEKALN 214
              +LL +I I  L +  ++ EA LL  Q ++L     P+ YNA++  CAR D LE AL 
Sbjct: 75  ETIDLLSAIAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALE 134

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           LM++MR  G+  D +NY+LV Q+  +  ++   ++ ++   IE + +E+D +L NDVI  
Sbjct: 135 LMNQMRGSGFQPDNVNYTLVFQACAK-KRVGVDVISRVCANIEQEGLEMDTKLYNDVINA 193

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           + +AGD  KA +++G+ Q   L P   +Y+++I  L    R  +AEA + E+K    K  
Sbjct: 194 YCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKIN 253

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
            +  NALL  Y +   L+  E ++ + E +G+     +Y LLIDAY+ AGR + A+    
Sbjct: 254 LRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFH 313

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M+V +   N+FIYSR++  YR+  +W  T ++LK+M +S ++P+   +N++IDT+GK+ 
Sbjct: 314 NMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFG 373

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  AM  F +M  EG +PD +TWN+LI+ H + G    A +L ++MQER   P   TYN
Sbjct: 374 RLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYN 433

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----- 569
           I++N LG   RW+++  LL  MR +GL PNVVTYTTLVD YG S R+ +A E L+     
Sbjct: 434 IILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQ 493

Query: 570 -------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                              GL +QA+  F+ M  DG++ +   LN LINAFG   +  EA
Sbjct: 494 GLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGKYVEA 553

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           F+V  Y+ E G+ PDVVTYTTLMKALI+ ++  +V   Y
Sbjct: 554 FSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVY 592



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 192/422 (45%), Gaps = 9/422 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC-----YSYELLYSILIHALGRSEKLYEA 182
           L++ ++   C +    D A+  +  +Q  +L      YS  +   +++  L  +E  Y A
Sbjct: 186 LYNDVINAYCRAGDP-DKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAY-A 243

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + S+  ++   T NAL+SA  R   LE+   LM      G      +Y L+I + +R  
Sbjct: 244 EMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAG 303

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++D +  +  +  ++ + +  +  + + ++V +  A      +R L       + P    
Sbjct: 304 RLDQA--KAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFI 361

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I      GR  +A   F ++ + G KP    +N+L++ + + G + +A  ++ +M+
Sbjct: 362 FNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQ 421

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
               +P  HTY+++++A     RW+   ++L EM      PN   Y+ ++  Y     ++
Sbjct: 422 ERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYR 481

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              + LK+MKS G++P T  Y  + +++ K      AM  F  M  +G+E +    N LI
Sbjct: 482 EASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLI 541

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +     G+Y  A  +F+ + E G  P   TY  ++  L + E+ + V  +   M   G  
Sbjct: 542 NAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCT 601

Query: 543 PN 544
           P+
Sbjct: 602 PD 603


>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
          Length = 292

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 162/257 (63%), Positives = 196/257 (76%), Gaps = 24/257 (9%)

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           AG+RDRG+WQ+ F VL+EM +SGV+PD HFYNVMIDTFGKYNCL HAM AF+RM  EGIE
Sbjct: 1   AGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIE 60

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD +TWNTLID H K GR+DRA ELFEEM+E    P TTTYNIMINLLGEQERW  V+ +
Sbjct: 61  PDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETM 120

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----------------------- 569
           L  M+ QGL+PN++TYTTLVD+YG+SGRF +AIEC+E                       
Sbjct: 121 LSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQ 180

Query: 570 -GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
            GL+D A+N  + MR DGL+ S + LNSL+NAFGED+R  EAF+VLQ+MKEN L+PDV+T
Sbjct: 181 RGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVIT 240

Query: 629 YTTLMKALIRVDKFHKV 645
           YTTLMKALIR+++F KV
Sbjct: 241 YTTLMKALIRIEQFDKV 257



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 123/254 (48%)

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
              + G   +A AV  E+  SG++P    YN ++  + K   L  A    + M   G+ P
Sbjct: 2   GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 61

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  T++ LIDA+   GR + A  + +EM  S+  P +  Y+ ++    ++  W     +L
Sbjct: 62  DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETML 121

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EMK  G+ P+   Y  ++D +G+      A+   + M ++G++P    ++ L++ + + 
Sbjct: 122 SEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQR 181

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D A  + + M+  G    T   N ++N  GE  R  +   +L  M+   L P+V+TY
Sbjct: 182 GLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITY 241

Query: 549 TTLVDIYGQSGRFD 562
           TTL+    +  +FD
Sbjct: 242 TTLMKALIRIEQFD 255



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 116/271 (42%)

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF   GD  KA   L      G+ P    Y  +I           A   F  ++E G++P
Sbjct: 2   GFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEP 61

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N L+  + K G    A  +  EM  S   P   TY+++I+      RW     +L
Sbjct: 62  DVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETML 121

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM+     PN   Y+ ++  Y   G ++   + ++ MK+ G++P    Y+ +++ + + 
Sbjct: 122 SEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQR 181

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
               HA+     M ++G+E  T+  N+L++   +  R   A  + + M+E    P   TY
Sbjct: 182 GLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITY 241

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             ++  L   E+++ V  +   M   G  P+
Sbjct: 242 TTLMKALIRIEQFDKVPVIYEEMITSGCAPD 272



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 37/301 (12%)

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           D +KA  ++ +M   G   D   Y+++I +  + N +  ++    +  +  + IE D   
Sbjct: 8   DWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAM--DAFNRMREEGIEPDVVT 65

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I    K G   +AM      +     P T TY  +I  L    R +  E +  E+K
Sbjct: 66  WNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMK 125

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E GL P    Y  L+  Y + G  K+A   +  M+  G+ P    Y  L++AYA      
Sbjct: 126 EQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQ----- 180

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
                                         RG       V+K M++ G+E  T   N ++
Sbjct: 181 ------------------------------RGLADHALNVVKAMRADGLEASTVVLNSLM 210

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + FG+   +  A +    M    + PD IT+ TL+    +  ++D+   ++EEM   G  
Sbjct: 211 NAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCA 270

Query: 508 P 508
           P
Sbjct: 271 P 271



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 107/279 (38%), Gaps = 37/279 (13%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +I    + + L  A++  ++MR++G   D + +                        
Sbjct: 31  YNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTW------------------------ 66

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                        N +I    K G   +AM      +     P T TY  +I  L    R
Sbjct: 67  -------------NTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQER 113

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            +  E +  E+KE GL P    Y  L+  Y + G  K+A   +  M+  G+ P    Y  
Sbjct: 114 WVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHA 173

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++AYA  G  + A  V+K M     + ++ + + ++  + +       F VL+ MK + 
Sbjct: 174 LVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKEND 233

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           + PD   Y  ++    +          ++ M++ G  PD
Sbjct: 234 LRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPD 272



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 42/280 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
            Y+++I   G+   L  A     R R   + P  +T+N LI A  +    ++A+ L  +M
Sbjct: 30  FYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEM 89

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+         Y+++I  L           Q+ +  +E    E+  Q             
Sbjct: 90  RESNCPPGTTTYNIMINLLGE---------QERWVGVETMLSEMKEQ------------- 127

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                          GL P   TY  ++     SGR  EA    E +K  GLKP    Y+
Sbjct: 128 ---------------GLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYH 172

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+  Y + G    A  VV  M   G+       + L++A+    R   A  VL+ M+ +
Sbjct: 173 ALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKEN 232

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
             +P+   Y+ ++       ++ +   + +EM +SG  PD
Sbjct: 233 DLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPD 272



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR ++  E F   +     P   TYN +I+     +       ++S+M++ G   + I Y
Sbjct: 77  GRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITY 136

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++    R+ +   ++  +  + ++ D ++    + + ++  +A+ G A  A+  +   
Sbjct: 137 TTLVDVYGRSGRFKEAI--ECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAM 194

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL   T    +++ A     R +EA +V + +KE+ L+P    Y  L+K  +++   
Sbjct: 195 RADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQF 254

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDA 379
                +  EM  SG  PD    ++L  A
Sbjct: 255 DKVPVIYEEMITSGCAPDRKARAMLRSA 282



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 9/231 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY--EAFLLS 186
           W++L+ +        D A  +   +++ N C      Y+I+I+ LG  E+    E  L  
Sbjct: 66  WNTLI-DAHRKGGRHDRAMELFEEMRESN-CPPGTTTYNIMINLLGEQERWVGVETMLSE 123

Query: 187 QR-QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q L P  +TY  L+    R+   ++A+  +  M+ DG       Y  ++ +  +   
Sbjct: 124 MKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGL 183

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +L   + K +  D +E    +LN ++  F +     +A   L   +   L P   TY
Sbjct: 184 ADHAL--NVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITY 241

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
             ++ AL    +  +   ++EE+  SG  P  KA   L      M Y K A
Sbjct: 242 TTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSALRYMKYTKVA 292


>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
 gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
 gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
          Length = 492

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 164/394 (41%), Positives = 233/394 (59%), Gaps = 24/394 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D + ++R L   Q  GL P  A YA +I AL+ +GRT+EAEA+  E++  GL+P    YN
Sbjct: 66  DLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYN 125

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY LL++AYA AGR E +  VL EM+  
Sbjct: 126 ALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR 185

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   YN +IDTFGKY  L  A
Sbjct: 186 GIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 245

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M +EG++PD  TWN+LI  H + G   RA   F  MQE G +P    +  +I+ 
Sbjct: 246 RKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISR 305

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K+L   MR +GL  +   Y  LVDIYGQ G F DA +C+           
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q VN  ++M  +G++P+ + LN LINAFG   R  EA AVLQ
Sbjct: 366 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++K++G+ PDVVTYTTLMKA +R  KF KV   Y
Sbjct: 426 HIKDSGMSPDVVTYTTLMKAFMRAKKFEKVSEVY 459



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 178/377 (47%), Gaps = 2/377 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +   Y  LI A AR     +A  L+ +MR+ G   D  +Y+ +++ L  T  +   L 
Sbjct: 83  RPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHL--RLA 140

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +L  ++  D +  + +    ++  +A+AG    +   LG  +  G+   TA Y+ ++  
Sbjct: 141 DRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRL 200

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             ++G   +A  +  E++E G++   K YN L+  + K G L DA  V  +M   GV PD
Sbjct: 201 YRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPD 260

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ LI  +   G  + A      M+     P+  I+  I++   ++G+W    ++  
Sbjct: 261 ITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFH 320

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M++ G++     Y V++D +G+Y     A      + +E ++     +  L + + + G
Sbjct: 321 GMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQG 380

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             ++   + + M+  G  P     N++IN  G   R  +   +L +++  G+ P+VVTYT
Sbjct: 381 LCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYT 440

Query: 550 TLVDIYGQSGRFDDAIE 566
           TL+  + ++ +F+   E
Sbjct: 441 TLMKAFMRAKKFEKVSE 457



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 7/384 (1%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQ---RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA   LL  R+   R     YNAL+        L  A  L+ +M 
Sbjct: 89  YARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMA 148

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y L++ +  R  +++ S    +  E++   I LD    + ++  +   G 
Sbjct: 149 DDGVARNRRTYMLLLNAYARAGRLEDSWW--VLGEMKRRGIRLDTAGYSTLVRLYRDNGM 206

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q +G+      Y  +I      G+  +A  VF+++   G+KP    +N+
Sbjct: 207 WKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNS 266

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G  K A    + M+  G+ PD   +  +I      G+W+  + +   M    
Sbjct: 267 LIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRG 326

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  +Y+ ++  Y   G ++     +  +K+  ++     + V+ + + +       +
Sbjct: 327 LKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQTV 386

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M +EGIEP+ +  N LI+     GR+  A  + + +++ G  P   TY  ++   
Sbjct: 387 NVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAF 446

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              +++E V  +   M   G  P+
Sbjct: 447 MRAKKFEKVSEVYKEMEGAGCTPD 470



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 33/218 (15%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS-------- 246
           T+N+LI    R  + ++AL   + M+++G + D   +  +I  L    K D         
Sbjct: 263 TWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGM 322

Query: 247 ------------SLLQKLYKE-------------IECDKIELDGQLLNDVIVGFAKAGDA 281
                       ++L  +Y +             ++ + ++L   +   +   +A+ G  
Sbjct: 323 RNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLC 382

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            + +  L + +  G+ P       +I A   +GR +EA AV + +K+SG+ P    Y  L
Sbjct: 383 EQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTL 442

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           +K +++    +    V  EME +G  PD     +L DA
Sbjct: 443 MKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREMLNDA 480


>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
 gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
          Length = 478

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 167/406 (41%), Positives = 237/406 (58%), Gaps = 28/406 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D + ++R L   Q  GL P  A YA +I AL+ +GRT+EAEA+  E++  GL+P    YN
Sbjct: 66  DLASSLRLLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYN 125

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY LL++AYA AGR E +  VL EM+  
Sbjct: 126 ALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRR 185

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   YN +IDTFGKY  L  A
Sbjct: 186 GIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 245

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M +EG++PD  TWN+LI  H + G   RA   F  MQE G +P    +  +I+ 
Sbjct: 246 RKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISR 305

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K+L   MR +GL  +   Y  LVDIYGQ G F DA +C+           
Sbjct: 306 LGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLS 365

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q VN  ++M  +G++P+ + LN LINAFG   R  EA AVLQ
Sbjct: 366 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQ 425

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKV----FSSYLFFNIYKM 657
           ++K++G+ PDVVTYTTLMKA +R  KF K     F S  F N+  M
Sbjct: 426 HIKDSGMSPDVVTYTTLMKAFMRAKKFEKACPLFFYSLAFSNLNIM 471



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 178/375 (47%), Gaps = 2/375 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +   Y  LI A AR     +A  L+ +MR+ G   D  +Y+ +++ L  T  +   L 
Sbjct: 83  RPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHL--RLA 140

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +L  ++  D +  + +    ++  +A+AG    +   LG  +  G+   TA Y+ ++  
Sbjct: 141 DRLLLQMADDGVARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTAGYSTLVRL 200

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             ++G   +A  +  E++E G++   K YN L+  + K G L DA  V  +M   GV PD
Sbjct: 201 YRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPD 260

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ LI  +   G  + A      M+     P+  I+  I++   ++G+W    ++  
Sbjct: 261 ITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFH 320

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M++ G++     Y V++D +G+Y     A      + +E ++     +  L + + + G
Sbjct: 321 GMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQG 380

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             ++   + + M+  G  P     N++IN  G   R  +   +L +++  G+ P+VVTYT
Sbjct: 381 LCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYT 440

Query: 550 TLVDIYGQSGRFDDA 564
           TL+  + ++ +F+ A
Sbjct: 441 TLMKAFMRAKKFEKA 455


>gi|295831085|gb|ADG39211.1| AT5G42310-like protein [Neslia paniculata]
          Length = 185

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 140/184 (76%), Positives = 161/184 (87%)

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WESARIVLKEME S  +PNSF++SR+LAGYRDRGEWQ+TFQVLKEMKS GV+PD  FYNV
Sbjct: 1   WESARIVLKEMEASDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 60

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +IDTFGK+NCL HAM  FDRMLSEGIEPD +TWNTLIDCH K GR+  AEE+FE M+ RG
Sbjct: 61  VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 120

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC TTYNIMIN  G+QERW+D+KRLLG M +QG+LPNVVT+TTLVD+YG+SGRF+DAI
Sbjct: 121 CLPCATTYNIMINSYGDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGKSGRFNDAI 180

Query: 566 ECLE 569
           ECLE
Sbjct: 181 ECLE 184



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  V +E++ S ++P +  ++ LL GY   G  +    V+ EM+  GV PD   Y+++ID
Sbjct: 4   ARIVLKEMEASDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +      + A      M     +P+   ++ ++  +   G      ++ + M+  G  P
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 123

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               YN+MI+++G             +M S+GI P+ +T  TL+D + K GR++ A E  
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 183

Query: 499 EE 500
           EE
Sbjct: 184 EE 185



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 82/179 (45%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + KE+E   ++ +  + + ++ G+   G+  K  + L   + +G+ P    Y  VI    
Sbjct: 7   VLKEMEASDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 66

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                  A   F+ +   G++P    +N L+  + K G    AE +   MER G LP   
Sbjct: 67  KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 126

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           TY+++I++Y +  RW+  + +L +M      PN   ++ ++  Y   G +    + L+E
Sbjct: 127 TYNIMINSYGDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 185



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 78/169 (46%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P +  ++ ++    + G   +   V +E+K  G+KP  + YN ++  + K   L  A 
Sbjct: 16  VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 75

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
                M   G+ PD  T++ LID +   GR   A  + + ME     P +  Y+ ++  Y
Sbjct: 76  TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 135

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            D+  W    ++L +M S G+ P+   +  ++D +GK    + A+   +
Sbjct: 136 GDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 184



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M +  ++P++  ++ L+  +   G + +  ++ +EM+  G  P    YN++I+
Sbjct: 4   ARIVLKEMEASDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+    +        M ++G+ P+ VT+ TL+D + + GR   A E            
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE-----------M 112

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P     N +IN++G+ +R  +   +L  M   G+ P+VVT+TTL+    +
Sbjct: 113 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMNSQGILPNVVTHTTLVDVYGK 172

Query: 639 VDKFH 643
             +F+
Sbjct: 173 SGRFN 177



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 67/145 (46%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE++   ++ D Q  N VI  F K      AM         G+ P   T+  +I   
Sbjct: 41  QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 100

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR I AE +FE ++  G  P    YN ++  Y       D + ++ +M   G+LP+ 
Sbjct: 101 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMNSQGILPNV 160

Query: 371 HTYSLLIDAYANAGRWESARIVLKE 395
            T++ L+D Y  +GR+  A   L+E
Sbjct: 161 VTHTTLVDVYGKSGRFNDAIECLEE 185


>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 498

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 162/412 (39%), Positives = 235/412 (57%), Gaps = 24/412 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL G+  N  I    K GD  KAM  L   Q +G  P + +Y  +I  L + GRT+EAEA
Sbjct: 18  ELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLEAEA 77

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +++E+   GLKPR K YN +L+G++K G L+ AE V+  ++  G+  ++ TY +L+D   
Sbjct: 78  LYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNV 137

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           NAGR E    V+ EM+    + NSF+YS+++  YRD G W++   +++E++  G+  D H
Sbjct: 138 NAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKH 197

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +IDTFGKY  L  A+     M  +GI PD +TWN+LI  H K G   +A ELF +M
Sbjct: 198 IYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKM 257

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Q +G +P       +I+ L EQ +W  ++     M++ G   +   Y  LVDIYGQ GRF
Sbjct: 258 QAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRF 317

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            DA EC+                        +GL +Q V   ++M  +G++P+ + LN L
Sbjct: 318 QDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVL 377

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           INAFG   R  EA ++  +MKE+G+ PDVVTY+TLMKA IR  KF +V   Y
Sbjct: 378 INAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIY 429



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 148/331 (44%), Gaps = 24/331 (7%)

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G +   ++YN+ +    K+G +  A  ++++M+  G  P   +Y+ LI+   + GR   
Sbjct: 15  TGQELSGESYNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLSVGRTLE 74

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  + +EM     KP   +Y+ +L G+  +G  +   +VL+ +   G+  +   Y +++D
Sbjct: 75  AEALYQEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLD 134

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                  L    +  + M  +G + ++  ++ +I  +   G + +A  + EE++E G   
Sbjct: 135 YNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPL 194

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YN +I+  G+    ++   +L NM+ QG+ P++VT+ +L+  + ++G    A+E  
Sbjct: 195 DKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELF 254

Query: 569 EGLSDQAV------------------------NAFRVMRTDGLKPSNLALNSLINAFGED 604
             +  Q +                          F +M++ G K S      L++ +G+ 
Sbjct: 255 SKMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQY 314

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            R  +A   +  +K  G+ P    +  L  A
Sbjct: 315 GRFQDAEECISALKSEGILPSASMFCVLANA 345



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 7/272 (2%)

Query: 165 LYSILIHALGRSEKLYEAF-LLS--QRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+ +I   G+  +L EA  +LS  Q+Q +TP  +T+N+LI    +  +L KAL L SKM
Sbjct: 198 IYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFSKM 257

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G + D      +I  L    K +  ++++ +  ++    +  G +   ++  + + G
Sbjct: 258 QAQGLYPDPKILVTIISRLAEQGKWN--IIRENFDIMKSWGYKKSGAIYAILVDIYGQYG 315

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   +   +  G+ P  + +  +  A +  G   +   V + ++  G++P     N
Sbjct: 316 RFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLN 375

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  +   G  ++A  +   M+ SG+ PD  TYS L+ AY  A +++    +  EME S
Sbjct: 376 VLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESS 435

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
              P+      + A     G     FQ+   M
Sbjct: 436 GCTPDKKAREILQAALMVLGRRNCKFQIFLAM 467


>gi|295831073|gb|ADG39205.1| AT5G42310-like protein [Capsella grandiflora]
 gi|295831075|gb|ADG39206.1| AT5G42310-like protein [Capsella grandiflora]
 gi|295831079|gb|ADG39208.1| AT5G42310-like protein [Capsella grandiflora]
 gi|295831083|gb|ADG39210.1| AT5G42310-like protein [Capsella grandiflora]
 gi|345293535|gb|AEN83259.1| AT5G42310-like protein, partial [Capsella rubella]
 gi|345293537|gb|AEN83260.1| AT5G42310-like protein, partial [Capsella rubella]
 gi|345293539|gb|AEN83261.1| AT5G42310-like protein, partial [Capsella rubella]
 gi|345293541|gb|AEN83262.1| AT5G42310-like protein, partial [Capsella rubella]
 gi|345293543|gb|AEN83263.1| AT5G42310-like protein, partial [Capsella rubella]
 gi|345293545|gb|AEN83264.1| AT5G42310-like protein, partial [Capsella rubella]
          Length = 185

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 138/184 (75%), Positives = 161/184 (87%)

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WESARIVLKEME    +PNSF++SR+LAGYRDRGEWQ+TFQVLKEMKS GV+PD  FYNV
Sbjct: 1   WESARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 60

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +IDTFGK+NCL HAM  FDRMLSEGIEPD +TWNTLIDCH K GR+  AE++FE M+ RG
Sbjct: 61  VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRG 120

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC TTYNIMIN  G+QERW+D+KRLLG M++QG+LPNVVT+TTLVD+YG+SGRF+DAI
Sbjct: 121 CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 180

Query: 566 ECLE 569
           ECLE
Sbjct: 181 ECLE 184



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  V +E++   ++P +  ++ LL GY   G  +    V+ EM+  GV PD   Y+++ID
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +      + A      M     +P+   ++ ++  +   G       + + M+  G  P
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               YN+MI+++G             +M S+GI P+ +T  TL+D + K GR++ A E  
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 183

Query: 499 EE 500
           EE
Sbjct: 184 EE 185



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + KE+E   ++ +  + + ++ G+   G+  K  + L   + +G+ P    Y  VI    
Sbjct: 7   VLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 66

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                  A   F+ +   G++P    +N L+  + K G    AE +   MER G LP   
Sbjct: 67  KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCAT 126

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           TY+++I++Y +  RW+  + +L +M+     PN   ++ ++  Y   G +    + L+E
Sbjct: 127 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 185



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P +  ++ ++    + G   +   V +E+K  G+KP  + YN ++  + K   L  A 
Sbjct: 16  VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 75

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
                M   G+ PD  T++ LID +   GR   A  + + ME     P +  Y+ ++  Y
Sbjct: 76  TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSY 135

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            D+  W    ++L +MKS G+ P+   +  ++D +GK    + A+   +
Sbjct: 136 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 184



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M +  ++P++  ++ L+  +   G + +  ++ +EM+  G  P    YN++I+
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+    +        M ++G+ P+ VT+ TL+D +           C  G    A + 
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH-----------CKHGRHIVAEDM 112

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P     N +IN++G+ +R  +   +L  MK  G+ P+VVT+TTL+    +
Sbjct: 113 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 172

Query: 639 VDKFH 643
             +F+
Sbjct: 173 SGRFN 177



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE++   ++ D Q  N VI  F K      AM         G+ P   T+  +I   
Sbjct: 41  QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 100

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR I AE +FE ++  G  P    YN ++  Y       D + ++ +M+  G+LP+ 
Sbjct: 101 CKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 160

Query: 371 HTYSLLIDAYANAGRWESARIVLKE 395
            T++ L+D Y  +GR+  A   L+E
Sbjct: 161 VTHTTLVDVYGKSGRFNDAIECLEE 185


>gi|359490014|ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/412 (39%), Positives = 235/412 (57%), Gaps = 24/412 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL G + N  I    + GD  KAM+ L   + +G S    +Y  VI AL + GRT+EAEA
Sbjct: 20  ELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEA 79

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E+   GLK   + YN +L+  ++ G L+ A+ V++EM+  G+  +  TY  L+D Y 
Sbjct: 80  IFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYG 139

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AGR      V+ EM      P+SF+YS+++  YRD G W++  ++++E++  GV  D  
Sbjct: 140 RAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKR 199

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +IDTFGK   L  A+  F++M  EG++PD +TWN+LI  H K G   +A ELF +M
Sbjct: 200 IYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKM 259

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           QE G +P    +  +I+ LGEQ +W+ +KR   NM+ +G   +   Y  LVDIYGQ GRF
Sbjct: 260 QEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRF 319

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
               EC+                        +GL +Q V   ++M T+G++P+ + LN L
Sbjct: 320 QGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNML 379

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           INAFG   R  EA +V  ++K+ G+ PDVVTY+TLMKA IR  KF KV   Y
Sbjct: 380 INAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIY 431



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 132/281 (46%), Gaps = 11/281 (3%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E+G +     YNA ++   ++G +  A  ++++ME  G      +Y+ +I+A  + GR
Sbjct: 14  ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 73

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  + +EM     K +  +Y+ +L     +G  +   +VL EM + G+  +   Y  
Sbjct: 74  TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 133

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D +G+   L+   A    M  +G  PD+  ++ +I  +   G + +A E+  E++E G
Sbjct: 134 LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 193

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                  YN +I+  G+     +   +   M+ +G+ P+++T+ +L+  + ++G    A+
Sbjct: 194 VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 253

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           E            F  M+ +GL P      ++I+  GE  +
Sbjct: 254 E-----------LFSKMQEEGLYPDPKIFITIISRLGEQGK 283



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 57/295 (19%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+ +I   G+  +L EA   F   Q + + P  +T+N+LI    +  D+ KAL L SKM
Sbjct: 200 IYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKM 259

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDS--------------------SLLQKLYKEI--- 256
           +++G + D   +  +I  L    K D                     ++L  +Y +    
Sbjct: 260 QEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRF 319

Query: 257 ----EC------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               EC      + I+    +   +   +A+ G   + ++ L + +  G+ P       +
Sbjct: 320 QGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNML 379

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A   +GR +EA +V+  +K++G+ P    Y+ L+K  ++         +  EME +G 
Sbjct: 380 INAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGC 439

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            PD     +L          ++A +VL++    H K    I       +R+RGEW
Sbjct: 440 TPDRKAREML----------QTALLVLQQ---RHCKYYFGIK------FRNRGEW 475



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 94/219 (42%), Gaps = 11/219 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL------YEA 182
           W+SL++  C +   +  A  + S +Q+  L Y    ++  +I  LG   K       +E 
Sbjct: 236 WNSLIQWHCKAGD-VGKALELFSKMQEEGL-YPDPKIFITIISRLGEQGKWDVIKRNFEN 293

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
                 QR +   Y  L+    +    +     +S ++ +G       + ++  +  +  
Sbjct: 294 MKCRGHQR-SGAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQG 352

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             + ++  K+ + +E + IE +  +LN +I  F  AG   +A+      +  G+SP   T
Sbjct: 353 LCEQTV--KVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVT 410

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           Y+ ++ A   + +  +   ++EE++ +G  P  KA   L
Sbjct: 411 YSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREML 449


>gi|295831077|gb|ADG39207.1| AT5G42310-like protein [Capsella grandiflora]
          Length = 185

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 137/184 (74%), Positives = 160/184 (86%)

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WESARIVLKEME    +PNSF++SR+LAGYRDRGEWQ+TFQVLKEMKS GV+PD  FYNV
Sbjct: 1   WESARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 60

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +IDTFGK+NCL HAM  FDRMLSEGIEPD +TWNTLIDCH K GR+  AE++FE M+ RG
Sbjct: 61  VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRG 120

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC TTYNIMIN  G+QERW+D+KRLL  M++QG+LPNVVT+TTLVD+YG+SGRF+DAI
Sbjct: 121 CLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 180

Query: 566 ECLE 569
           ECLE
Sbjct: 181 ECLE 184



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  V +E++   ++P +  ++ LL GY   G  +    V+ EM+  GV PD   Y+++ID
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +      + A      M     +P+   ++ ++  +   G       + + M+  G  P
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               YN+MI+++G             +M S+GI P+ +T  TL+D + K GR++ A E  
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 183

Query: 499 EE 500
           EE
Sbjct: 184 EE 185



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + KE+E   ++ +  + + ++ G+   G+  K  + L   + +G+ P    Y  VI    
Sbjct: 7   VLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 66

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                  A   F+ +   G++P    +N L+  + K G    AE +   MER G LP   
Sbjct: 67  KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCAT 126

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           TY+++I++Y +  RW+  + +L +M+     PN   ++ ++  Y   G +    + L+E
Sbjct: 127 TYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 185



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P +  ++ ++    + G   +   V +E+K  G+KP  + YN ++  + K   L  A 
Sbjct: 16  VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 75

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
                M   G+ PD  T++ LID +   GR   A  + + ME     P +  Y+ ++  Y
Sbjct: 76  TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSY 135

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            D+  W    ++L +MKS G+ P+   +  ++D +GK    + A+   +
Sbjct: 136 GDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 184



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M +  ++P++  ++ L+  +   G + +  ++ +EM+  G  P    YN++I+
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+    +        M ++G+ P+ VT+ TL+D +           C  G    A + 
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH-----------CKHGRHIVAEDM 112

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P     N +IN++G+ +R  +   +L  MK  G+ P+VVT+TTL+    +
Sbjct: 113 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGK 172

Query: 639 VDKFH 643
             +F+
Sbjct: 173 SGRFN 177



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE++   ++ D Q  N VI  F K      AM         G+ P   T+  +I   
Sbjct: 41  QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 100

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR I AE +FE ++  G  P    YN ++  Y       D + ++ +M+  G+LP+ 
Sbjct: 101 CKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNV 160

Query: 371 HTYSLLIDAYANAGRWESARIVLKE 395
            T++ L+D Y  +GR+  A   L+E
Sbjct: 161 VTHTTLVDVYGKSGRFNDAIECLEE 185


>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 157/408 (38%), Positives = 234/408 (57%), Gaps = 24/408 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL   L + +I    K GD  +AM  L   +  G    + +YA +I AL N GRT EA+ 
Sbjct: 81  ELSSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADM 140

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+E+   G KP+   Y++LL+G++K G L  A  V+ EM+  G+   + TY + +D Y 
Sbjct: 141 LFKEMVCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYV 200

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AGR E     + EM+      NSF+YS+++  YRD G W++  +VL+E++  G+  DTH
Sbjct: 201 GAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTH 260

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N +IDTFGKY  L  A+  F +M  EG+ P+ +TWN+LI  H K G + +A  LF +M
Sbjct: 261 ICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDM 320

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           QE+G +P    +  +I+ LGEQ +W+ +K+   +M+ +G       Y  LVDIYGQ G+F
Sbjct: 321 QEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKF 380

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +A EC+                        +GL +Q +   ++M  +G++P+ + LN L
Sbjct: 381 QNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNML 440

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           INAFG   R  EA +V  ++KE+G+ PDVVTYTTLMKA IR  KF +V
Sbjct: 441 INAFGNAGRYMEAISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEV 488



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 11/243 (4%)

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +S + S+++      G+  R   +L +M++ G    +  Y  +I+  G       A   F
Sbjct: 83  SSNLCSQLICECCKEGDLDRAMSLLSQMEAKGFHLSSTSYACLIEALGNVGRTSEADMLF 142

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+  G +P    +++L+    K G    A  + +EM + G +    TY I ++     
Sbjct: 143 KEMVCYGYKPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYYVGA 202

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            R ED    +  M+ +G   N   Y+ +V IY  +G +  AIE LE +           R
Sbjct: 203 GRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEI-----------R 251

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             G+       NS+I+ FG+     EA  + + M++ G++P++VT+ +L+K   +   F 
Sbjct: 252 ERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFM 311

Query: 644 KVF 646
           K F
Sbjct: 312 KAF 314



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 105/604 (17%), Positives = 233/604 (38%), Gaps = 102/604 (16%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK--LYEAFLLS 186
           W+SL+K  C     +  A+ + + +Q+  L Y    ++  +I  LG   K  + + +  S
Sbjct: 297 WNSLIKWHCKEGDFMK-AFHLFTDMQEQGL-YPDPKIFVTIISCLGEQGKWDIIKKYFES 354

Query: 187 QRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + R        Y  L+    +    + A   +  ++ +G       + ++  +  +   
Sbjct: 355 MKIRGNKEYGAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGL 414

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +  ++  + + +E + IE +  +LN +I  F  AG   +A+      +  G+SP   TY
Sbjct: 415 CEQVIM--VLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTY 472

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL---------------------- 341
             ++ A   + +  E   +++E++  G  P  KA   L                      
Sbjct: 473 TTLMKAFIRAKKFDEVPIIYKEMENDGCTPDRKARQMLQVALTLIDHDRLIIKTRMLLAA 532

Query: 342 -----LKGYVKMGYLKDAEFVVSE-------MERSGVL-------------PDEHTYSLL 376
                 +  ++ G L+     +S         +  GVL             P +H  S  
Sbjct: 533 KDAMTCQLLIEYGILRQISLTISRPRKVKLAQDTPGVLIIVLIKESVVLCYPSKH--SGF 590

Query: 377 IDAYANAGRWESARIVLKEME----------VSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
              YA     + A  + K ME          ++ ++P+   ++ +++ + ++   ++ F 
Sbjct: 591 GGGYAQTP--DDAWTMFKSMEFQNLVSWNSVIAGSQPDIVSWTALISAFAEQDP-EQAFL 647

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  ++      PD + +++ +     +     AM    +++ EG + DT+  N LI  + 
Sbjct: 648 LFCQLHRQSYLPDWYTFSIALKASTYFATEQRAMDIHSQVIKEGFQEDTVLCNALIHAYA 707

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
            CG    ++++F EM  R       ++N M+       + +D   L   M    +  +  
Sbjct: 708 WCGSLALSKQVFNEMGCRD----LVSWNSMLKSYAIHGQTKDAVELFQRMN---VCTDSA 760

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           T+  L+      G  D+ ++    +SD            G+ P     + +++ +G   +
Sbjct: 761 TFVVLLSACSHVGFVDEGVKLFNCMSDD----------HGVVPQLDHYSCMVDLYGGAGK 810

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR----------VDKFHKVFSSYLFFNIYK 656
             EA  +++ M    +KPD V +++L+ +  +           DKF K     + +++YK
Sbjct: 811 IFEAEELIRKMP---MKPDSVIWSSLLGSCRKHGKTPLAKSAADKF-KELDQTIHWDMYK 866

Query: 657 MLSY 660
             +Y
Sbjct: 867 CQTY 870


>gi|295831081|gb|ADG39209.1| AT5G42310-like protein [Capsella grandiflora]
          Length = 185

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 136/184 (73%), Positives = 159/184 (86%)

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WESARIVLKEME    +PNSF++SR+LAGYRDRGEWQ+TFQVLKEMKS GV+PD  FYNV
Sbjct: 1   WESARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 60

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +IDTFGK+NCL HAM  FDRMLS GIEPD +TWNTLIDCH K GR+  AE++FE M+ RG
Sbjct: 61  VIDTFGKFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRG 120

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC TTYNIMIN  G+QERW+D+KRLL  M++QG+LPNVVT+TTLVD+YG+SGRF+DAI
Sbjct: 121 CLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAI 180

Query: 566 ECLE 569
           ECLE
Sbjct: 181 ECLE 184



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  V +E++   ++P +  ++ LL GY   G  +    V+ EM+  GV PD   Y+++ID
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +      + A      M     +P+   ++ ++  +   G       + + M+  G  P
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLP 123

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               YN+MI+++G             +M S+GI P+ +T  TL+D + K GR++ A E  
Sbjct: 124 CATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 183

Query: 499 EE 500
           EE
Sbjct: 184 EE 185



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + KE+E   ++ +  + + ++ G+   G+  K  + L   + +G+ P    Y  VI    
Sbjct: 7   VLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 66

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                  A   F+ +   G++P    +N L+  + K G    AE +   MER G LP   
Sbjct: 67  KFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCAT 126

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           TY+++I++Y +  RW+  + +L +M+     PN   ++ ++  Y   G +    + L+E
Sbjct: 127 TYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 185



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 79/169 (46%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P +  ++ ++    + G   +   V +E+K  G+KP  + YN ++  + K   L  A 
Sbjct: 16  VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 75

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
                M   G+ PD  T++ LID +   GR   A  + + ME     P +  Y+ ++  Y
Sbjct: 76  TTFDRMLSXGIEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSY 135

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            D+  W    ++L +MKS G+ P+   +  ++D +GK    + A+   +
Sbjct: 136 GDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 184



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 11/185 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M +  ++P++  ++ L+  +   G + +  ++ +EM+  G  P    YN++I+
Sbjct: 4   ARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 63

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+    +        M + G+ P+ VT+ TL+D +           C  G    A + 
Sbjct: 64  TFGKFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCH-----------CKHGRHIVAEDM 112

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P     N +IN++G+ +R  +   +L  MK  G+ P+VVT+TTL+    +
Sbjct: 113 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNVVTHTTLVDVYGK 172

Query: 639 VDKFH 643
             +F+
Sbjct: 173 SGRFN 177



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE++   ++ D Q  N VI  F K      AM         G+ P   T+  +I   
Sbjct: 41  QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSXGIEPDRVTWNTLIDCH 100

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR I AE +FE ++  G  P    YN ++  Y       D + ++ +M+  G+LP+ 
Sbjct: 101 CKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLXKMKSQGILPNV 160

Query: 371 HTYSLLIDAYANAGRWESARIVLKE 395
            T++ L+D Y  +GR+  A   L+E
Sbjct: 161 VTHTTLVDVYGKSGRFNDAIECLEE 185


>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 492

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 162/394 (41%), Positives = 229/394 (58%), Gaps = 24/394 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D + ++  L   +  G+ P  A YA +I AL+ +GRT+EAEA+  E++  GL+P    YN
Sbjct: 68  DLAHSLHVLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYN 127

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L  A+ ++ +M   GV  +  TY LL+DAYA AGR E +  VL EM+  
Sbjct: 128 ALLEGLLARAHLCLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRR 187

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   YN +IDTFGKY  L  A
Sbjct: 188 GIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADA 247

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F++M +EGI+PD  TWN LI  H + G   RA   F  MQE G +P    +  +I+ 
Sbjct: 248 RRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDPKIFMSIISR 307

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K+L   MR +GL  +   Y  LVDIYGQ GRF DA EC+           
Sbjct: 308 LGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLS 367

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q VN  ++M  +G++P+ + LN LINAF    R  EA AV Q
Sbjct: 368 PSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAVAVFQ 427

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++K++G+ PDVVTYTTLMK  +RV KF KV   Y
Sbjct: 428 HIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVY 461



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 42/255 (16%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +Y+ LI   G+  +L +A  L ++ R   +     T+NALI    R  ++++AL   + M
Sbjct: 230 IYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRALRFFAAM 289

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI----------------------- 256
           +++G + D   +  +I  L    K D   L+KL+ ++                       
Sbjct: 290 QEEGMYPDPKIFMSIISRLGEQGKWDE--LKKLFDKMRNRGLKESGAVYAVLVDIYGQYG 347

Query: 257 ------EC------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
                 EC      +++ L   +   +   +A+ G   + +  L + +  G+ P      
Sbjct: 348 RFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLN 407

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I A S +GR +EA AVF+ +K+SG+ P    Y  L+KG++++   +    V +EMER+
Sbjct: 408 LLINAFSTAGRHLEAVAVFQHIKDSGMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERA 467

Query: 365 GVLPDEHTYSLLIDA 379
           G  PD     +L DA
Sbjct: 468 GCTPDRKAREMLHDA 482


>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 554

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 230/408 (56%), Gaps = 24/408 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL   L +  I    K GD  +AM  L   +  G    +  YA +I AL N GRT EA+ 
Sbjct: 78  ELSSNLCSQFICECCKEGDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEADM 137

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+E+   G KP+   Y +LL+G++K G L  A  V+ EM+ SG+   + TY + +D Y 
Sbjct: 138 LFKEMICDGYKPKLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYV 197

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AGR E     +  M+      NSF+YS+++  YRD G W++  +VL+E++  G+  DTH
Sbjct: 198 GAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTH 257

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N +IDTFGKY  L  A+  F +M  EG+ P+ +TWN+LI  H K G + ++  LF +M
Sbjct: 258 ICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDM 317

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           QE+G +P    +  +I+ +GEQ +W  +K+   +M+ +G       Y  LVDIYGQ G+F
Sbjct: 318 QEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKF 377

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +A EC+                        +GL +Q +   ++M  +G++P+ + LN L
Sbjct: 378 QNARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNML 437

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           INAFG   R  EA +V  ++KE+G+ PDVVTYTTLMKA IR  KF +V
Sbjct: 438 INAFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEV 485



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/419 (20%), Positives = 177/419 (42%), Gaps = 20/419 (4%)

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT- 195
           C     +D A +++S ++      S    Y+ LI ALG   +  EA +L +         
Sbjct: 91  CCKEGDLDRAMSLLSQMEAKGFHLS-STAYACLIEALGNVGRTSEADMLFKEMICDGYKP 149

Query: 196 ----YNALISACARNDDLEKALNLMSKMRQDGY------HCDFINYSLVIQSLTRTNKID 245
               Y +L+    +   L  A  ++ +M   G       +  F++Y +    L  T    
Sbjct: 150 KLNFYTSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTI 209

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
           + + QK +         L+  + + V+  +   G   KA+  L   +  G+S  T    +
Sbjct: 210 NVMKQKGF--------PLNSFVYSKVVGIYRDNGMWKKAIEVLEEIRERGISLDTHICNS 261

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I      G   EA  +F+++++ G++P    +N+L+K + K G    +  + ++M+  G
Sbjct: 262 IIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQG 321

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD   +  +I      G+W   +   + M++   K    +Y+ ++  Y   G++Q   
Sbjct: 322 LYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQNAR 381

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           + ++ +KS GV      + V+ + + +       +     M +EGIEP+ +  N LI+  
Sbjct: 382 ECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAF 441

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
              GRY  A  ++  ++E G  P   TY  ++      +++++V  +   M      P+
Sbjct: 442 GNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTPD 500



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 11/228 (4%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  R   +L +M++ G    +  Y  +I+  G       A   F  M+ +G +P    +
Sbjct: 95  GDLDRAMSLLSQMEAKGFHLSSTAYACLIEALGNVGRTSEADMLFKEMICDGYKPKLNFY 154

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            +L+    K G    A  + +EM   G +    TY I ++      R ED    +  M+ 
Sbjct: 155 TSLLRGFLKKGLLGLANGVLKEMDYSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVMKQ 214

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G   N   Y+ +V IY  +G +  AIE LE +           R  G+       NS+I
Sbjct: 215 KGFPLNSFVYSKVVGIYRDNGMWKKAIEVLEEI-----------RERGISLDTHICNSII 263

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + FG+     EA  + + M++ G++P++VT+ +L+K   +   F K F
Sbjct: 264 DTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSF 311



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 42/248 (16%)

Query: 169 LIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           +I   G+  +L EA  L    Q++ + P  +T+N+LI    +  D  K+ +L + M++ G
Sbjct: 262 IIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLFTDMQEQG 321

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI--------------------------- 256
            + D   +  +I  +    K    +++K ++ +                           
Sbjct: 322 LYPDPKIFVTIISCMGEQGKW--GIIKKYFESMKIRGNKEYGAVYAVLVDIYGQYGKFQN 379

Query: 257 --EC-DKIELDGQLLNDVIV-----GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             EC   ++ +G L++  I       +A+ G   + +  L + +  G+ P       +I 
Sbjct: 380 ARECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLIN 439

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A  N+GR +EA +V+  +KESG+ P    Y  L+K +++     +   +  EME     P
Sbjct: 440 AFGNAGRYMEAMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTP 499

Query: 369 DEHTYSLL 376
           D     +L
Sbjct: 500 DRKARQML 507


>gi|326487288|dbj|BAJ89628.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 461

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 228/395 (57%), Gaps = 24/395 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D +++++ L   Q  G+ P  A YA +I AL+ +GR +EAEA+  E++  GL+P    YN
Sbjct: 67  DLARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYN 126

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY LL+DAYA AGR E +  VL EM+  
Sbjct: 127 ALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRW 186

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   YN +IDTFGKY  L  A
Sbjct: 187 GIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADA 246

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F++M  +GI+PD  TWN LI  H + G   RA      MQE G +P    +  +IN 
Sbjct: 247 RKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINR 306

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K L   MR +G   +   Y  LVDIYGQ G F DA EC+           
Sbjct: 307 LGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLS 366

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q V+  ++M  +G++P+ + LN LINAF    R  EA AV Q
Sbjct: 367 PSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQ 426

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           ++K++G+ PDVVTYTTLMKA +RV ++ KV   YL
Sbjct: 427 HIKDSGMSPDVVTYTTLMKAFMRVKRYEKVRLLYL 461



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 172/372 (46%), Gaps = 7/372 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA  L    R   L      YNAL+        L  A  L+ +M 
Sbjct: 90  YARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLRLADRLLLQMA 149

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y L++ +  R  +++ S    +  E++   I LD    + ++  +  +G 
Sbjct: 150 DDGVARNRRTYMLLLDAYARAGRLEDSWW--VLGEMKRWGIRLDTAGYSTLVRLYRDSGM 207

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q VG+      Y  +I      G+  +A  +FE+++  G+KP  + +NA
Sbjct: 208 WKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNA 267

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G +K A   ++ M+  G+ PD   +  +I+     G+W+  + +  +M    
Sbjct: 268 LIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWDELKELFDKMRNRG 327

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  IY+ ++  Y   G ++   + +  +K+  ++     + V+ + + +       +
Sbjct: 328 FKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTV 387

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           +    M +EGIEP+ +  N LI+     GR+  A+ +F+ +++ G  P   TY  ++   
Sbjct: 388 SVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAF 447

Query: 521 GEQERWEDVKRL 532
              +R+E V+ L
Sbjct: 448 MRVKRYEKVRLL 459



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/373 (23%), Positives = 173/373 (46%), Gaps = 2/373 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +   Y  LI A AR     +A  L+ +MR  G   D  +Y+ +++ L     +   L 
Sbjct: 84  RPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHL--RLA 141

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +L  ++  D +  + +    ++  +A+AG    +   LG  +  G+   TA Y+ ++  
Sbjct: 142 DRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAGYSTLVRL 201

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             +SG   +A  +  E++E G++   K YN L+  + K G L DA  +  +M   G+ PD
Sbjct: 202 YRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPD 261

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ LI  +   G  + A   L  M+     P+  I+  I+    ++G+W    ++  
Sbjct: 262 IETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWDELKELFD 321

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M++ G +     Y V++D +G+Y     A      + +E ++     +  L + + + G
Sbjct: 322 KMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQG 381

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             ++   + + M+  G  P     N++IN      R  + + +  +++  G+ P+VVTYT
Sbjct: 382 LCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYT 441

Query: 550 TLVDIYGQSGRFD 562
           TL+  + +  R++
Sbjct: 442 TLMKAFMRVKRYE 454



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 143/307 (46%), Gaps = 8/307 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--- 251
           TY  L+ A AR   LE +  ++ +M++ G   D   YS +++ L R    DS + +K   
Sbjct: 159 TYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAGYSTLVR-LYR----DSGMWKKATD 213

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  E++   +ELD ++ N +I  F K G  + A +     +G G+ P   T+ A+I    
Sbjct: 214 LIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHC 273

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A      ++E G+ P  K +  ++    + G   + + +  +M   G      
Sbjct: 274 RVGNMKRALRFLAAMQEEGMYPDPKIFITIINRLGEQGKWDELKELFDKMRNRGFKESGA 333

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y++L+D Y   G +  A+  +  ++  + + +  I+  +   Y  +G  ++T  VL+ M
Sbjct: 334 IYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLM 393

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           ++ G+EP+    N++I+ F        A A F  +   G+ PD +T+ TL+    +  RY
Sbjct: 394 EAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRY 453

Query: 492 DRAEELF 498
           ++   L+
Sbjct: 454 EKVRLLY 460


>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 491

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 157/394 (39%), Positives = 227/394 (57%), Gaps = 24/394 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D +++++ L   Q  G+ P  A YA +I AL+ +GR +EAEA+  E++  GL+P    YN
Sbjct: 67  DLARSLQLLADMQAAGMRPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYN 126

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY LL+DAYA AGR E +  VL EM+  
Sbjct: 127 ALLEGLLARAHLRLADRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRW 186

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   YN +IDTFGKY  L  A
Sbjct: 187 GIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADA 246

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F++M  +GI+PD  TWN LI  H + G   RA      MQE G +P    +  +IN 
Sbjct: 247 RKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINK 306

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K L   MR +G   +   Y  LVDIYGQ G F DA EC+           
Sbjct: 307 LGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLS 366

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q V+  ++M  +G++P+ + LN LINAF    R  EA AV Q
Sbjct: 367 PSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQ 426

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++K++G+ PDVVTYTTLMKA +RV ++ KV   Y
Sbjct: 427 HIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVY 460



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 175/384 (45%), Gaps = 7/384 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA  L    R   L      YNAL+        L  A  L+ +M 
Sbjct: 90  YARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLRLADRLLLQMA 149

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y L++ +  R  +++ S    +  E++   I LD    + ++  +  +G 
Sbjct: 150 DDGVARNRRTYMLLLDAYARAGRLEDSWW--VLGEMKRWGIRLDTAGYSTLVRLYRDSGM 207

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q VG+      Y  +I      G+  +A  +FE+++  G+KP  + +NA
Sbjct: 208 WKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNA 267

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G +K A   ++ M+  G+ PD   +  +I+     G+W+  + +  +M    
Sbjct: 268 LIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRG 327

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  IY+ ++  Y   G ++   + +  +K+  ++     + V+ + + +       +
Sbjct: 328 FKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTV 387

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           +    M +EGIEP+ +  N LI+     GR+  A+ +F+ +++ G  P   TY  ++   
Sbjct: 388 SVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAF 447

Query: 521 GEQERWEDVKRLLGNMRAQGLLPN 544
              +R+E V  +   M   G  P+
Sbjct: 448 MRVKRYEKVSEVYSEMERAGCTPD 471



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/377 (23%), Positives = 174/377 (46%), Gaps = 2/377 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +   Y  LI A AR     +A  L+ +MR  G   D  +Y+ +++ L     +   L 
Sbjct: 84  RPSAAAYARLIRALARAGRALEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHL--RLA 141

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +L  ++  D +  + +    ++  +A+AG    +   LG  +  G+   TA Y+ ++  
Sbjct: 142 DRLLLQMADDGVARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAGYSTLVRL 201

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             +SG   +A  +  E++E G++   K YN L+  + K G L DA  +  +M   G+ PD
Sbjct: 202 YRDSGMWKKATDLIMEMQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIKPD 261

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ LI  +   G  + A   L  M+     P+  I+  I+    ++G+W    ++  
Sbjct: 262 IETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIFITIINKLGEQGKWDELKELFD 321

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M++ G +     Y V++D +G+Y     A      + +E ++     +  L + + + G
Sbjct: 322 KMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKAENLQLSPSIFCVLANAYAQQG 381

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             ++   + + M+  G  P     N++IN      R  + + +  +++  G+ P+VVTYT
Sbjct: 382 LCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYT 441

Query: 550 TLVDIYGQSGRFDDAIE 566
           TL+  + +  R++   E
Sbjct: 442 TLMKAFMRVKRYEKVSE 458



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 38/253 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +Y+ LI   G+  +L +A  + ++ R   +     T+NALI    R  ++++AL  ++ M
Sbjct: 229 IYNGLIDTFGKYGQLADARKMFEKMRGQGIKPDIETWNALIRWHCRVGNMKRALRFLAAM 288

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDS--------------------SLLQKLYKEI--- 256
           +++G + D   +  +I  L    K D                     ++L  +Y +    
Sbjct: 289 QEEGMYPDPKIFITIINKLGEQGKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHF 348

Query: 257 ----EC------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               EC      + ++L   +   +   +A+ G   + +  L + +  G+ P       +
Sbjct: 349 RDAQECVAALKAENLQLSPSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLL 408

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A S +GR +EA+AVF+ +K+SG+ P    Y  L+K ++++   +    V SEMER+G 
Sbjct: 409 INAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGC 468

Query: 367 LPDEHTYSLLIDA 379
            PD     +L DA
Sbjct: 469 TPDRKAREMLHDA 481



 Score = 39.7 bits (91), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 42/93 (45%)

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E + IE +  +LN +I  F+ AG   +A       +  G+SP   TY  ++ A     R
Sbjct: 393 MEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIKDSGMSPDVVTYTTLMKAFMRVKR 452

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
             +   V+ E++ +G  P  KA   L    V M
Sbjct: 453 YEKVSEVYSEMERAGCTPDRKAREMLHDASVTM 485


>gi|147778635|emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 224/417 (53%), Gaps = 35/417 (8%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL G + N  I    + GD  KAM+ L   + +G S    +Y  VI AL + GRT+EAEA
Sbjct: 39  ELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEA 98

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E+   GLK   + YN +L+  ++ G L+ A+ V++EM+  G+  +  TY  L+D Y 
Sbjct: 99  IFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEALVDYYG 158

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AGR      V+ EM      P+SF+YS+++  YRD G W++  ++++E++  GV  D  
Sbjct: 159 RAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMGVSLDKR 218

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +IDTFGK   L  A+  F++M  EG++PD +TWN+LI  H K G   +A ELF +M
Sbjct: 219 IYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFSKM 278

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           QE G +P    +  +I+ LGEQ +W+ +KR   NM+ +G   +   Y  LVDIYGQ GRF
Sbjct: 279 QEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYAILVDIYGQYGRF 338

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
               EC+                        +GL +Q V   ++M T+G++P+ + LN L
Sbjct: 339 QGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNML 398

Query: 598 INAFGEDQRDAEAFAVLQYMKEN-----------GLKPDVVTYTTLMKALIRVDKFH 643
           INAFG   R  EA +V  ++K+            G  PD      L  AL+ + + H
Sbjct: 399 INAFGIAGRHLEALSVYHHIKDTVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRH 455



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 132/281 (46%), Gaps = 11/281 (3%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E+G +     YNA ++   ++G +  A  ++++ME  G      +Y+ +I+A  + GR
Sbjct: 33  ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 92

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  + +EM     K +  +Y+ +L     +G  +   +VL EM + G+  +   Y  
Sbjct: 93  TLEAEAIFREMVHLGLKLDLRVYNVMLRSCLRKGLLELADKVLAEMDALGIGRNRATYEA 152

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D +G+   L+   A    M  +G  PD+  ++ +I  +   G + +A E+  E++E G
Sbjct: 153 LVDYYGRAGRLNDVWAVIGEMSRDGFGPDSFVYSKVIGVYRDNGMWKKAMEIVREIREMG 212

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                  YN +I+  G+     +   +   M+ +G+ P+++T+ +L+  + ++G    A+
Sbjct: 213 VSLDKRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKAL 272

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           E            F  M+ +GL P      ++I+  GE  +
Sbjct: 273 E-----------LFSKMQEEGLYPDPKIFITIISRLGEQGK 302


>gi|410129734|dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
          Length = 517

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/412 (35%), Positives = 224/412 (54%), Gaps = 24/412 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL  ++ ++ I  + K G   KAM  +   Q +GL P    Y  +I  L N GRT+E E 
Sbjct: 78  ELSLEMYSEKISHYCKKGYVDKAMSCISEIQALGLCPNLFCYLCLIEGLGNVGRTLEVEM 137

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VF+E+   GL+P    +N +L+G+++ G  K A   +  ME  G+  ++ T  + +D Y 
Sbjct: 138 VFQEMLYLGLRPNIVVFNVMLRGFLRKGLYKLANRALRVMEDLGMCKNQETLEIFLDYYV 197

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           +  R      ++ +M+    + NSF YSR++  YRD G W++  +++ E+   GV  D  
Sbjct: 198 SGRRLSDTWRIIGDMKRKGYQLNSFAYSRVIELYRDNGMWKKAMEIVGEISEMGVPMDRR 257

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +IDTFGKY  L  A+    +M  E I PD +TWN+LI  H K G + +A +LF EM
Sbjct: 258 IYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFTEM 317

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Q++G +P    + I+I+ LG   +W+ ++     M+ +G   +   Y  LVDIYGQ G+F
Sbjct: 318 QDQGLYPDPKIFIILISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYGKF 377

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             A +C+                        +GL ++ V   +VM  +G++P+ + LN L
Sbjct: 378 QGAEDCISALRAEGVQMSSNIYSVMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNIL 437

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           INAFG   R  EA ++  ++ ENG+ PD+VTYTTLMKALIR  KF KV   Y
Sbjct: 438 INAFGIAGRHLEALSIYDHIIENGINPDIVTYTTLMKALIRAKKFTKVPELY 489



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 201/460 (43%), Gaps = 28/460 (6%)

Query: 99  SASALASSPSSLNR--VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH 156
           +  +L + P+S N+  +E+ +    + +   ++   + + C     +D A + +S +Q  
Sbjct: 55  TTKSLENLPNSYNKSFMEYPIG---KELSLEMYSEKISHYCKK-GYVDKAMSCISEIQAL 110

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
            LC +    Y  LI  LG   +  E  ++ Q       R   + +N ++    R   L K
Sbjct: 111 GLCPNL-FCYLCLIEGLGNVGRTLEVEMVFQEMLYLGLRPNIVVFNVMLRGFLRKG-LYK 168

Query: 212 ALNLMSKMRQDGYHCD-------FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
             N   ++ +D   C        F++Y +  + L+ T +I   + +K Y        +L+
Sbjct: 169 LANRALRVMEDLGMCKNQETLEIFLDYYVSGRRLSDTWRIIGDMKRKGY--------QLN 220

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               + VI  +   G   KAM  +G    +G+      Y ++I      G   EA  V  
Sbjct: 221 SFAYSRVIELYRDNGMWKKAMEIVGEISEMGVPMDRRIYNSIIDTFGKYGELDEALKVLV 280

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           +++   + P    +N+L+K + K G    A  + +EM+  G+ PD   + +LI    N G
Sbjct: 281 KMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFTEMQDQGLYPDPKIFIILISQLGNLG 340

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +W+  R   ++M+    K +  +Y+ ++  Y   G++Q     +  +++ GV+  ++ Y+
Sbjct: 341 KWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYGKFQGAEDCISALRAEGVQMSSNIYS 400

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           VM + + +       +     M +EGIEP+ I  N LI+     GR+  A  +++ + E 
Sbjct: 401 VMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNILINAFGIAGRHLEALSIYDHIIEN 460

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           G  P   TY  ++  L   +++  V  L  +M   G  P+
Sbjct: 461 GINPDIVTYTTLMKALIRAKKFTKVPELYQHMELAGCTPD 500



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 46/235 (19%)

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G E     Y+  I  + K   +  AM+    + + G+ P+   +  LI+     GR    
Sbjct: 76  GKELSLEMYSEKISHYCKKGYVDKAMSCISEIQALGLCPNLFCYLCLIEGLGNVGRTLEV 135

Query: 495 EELFEEMQERGYFPCTTTYNIM----------------------INLLGEQE-------- 524
           E +F+EM   G  P    +N+M                      + +   QE        
Sbjct: 136 EMVFQEMLYLGLRPNIVVFNVMLRGFLRKGLYKLANRALRVMEDLGMCKNQETLEIFLDY 195

Query: 525 -----RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                R  D  R++G+M+ +G   N   Y+ ++++Y  +G +  A+E +  +S+  V   
Sbjct: 196 YVSGRRLSDTWRIIGDMKRKGYQLNSFAYSRVIELYRDNGMWKKAMEIVGEISEMGVPMD 255

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           R +            NS+I+ FG+     EA  VL  M+   + PD++T+ +L+K
Sbjct: 256 RRI-----------YNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIK 299



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/250 (19%), Positives = 106/250 (42%), Gaps = 38/250 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+ +I   G+  +L EA  +    +R+ + P  +T+N+LI    +  D  KAL+L ++M
Sbjct: 258 IYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFTEM 317

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID--------------------SSLLQKLYKE---- 255
           +  G + D   + ++I  L    K D                     ++L  +Y +    
Sbjct: 318 QDQGLYPDPKIFIILISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYAVLVDIYGQYGKF 377

Query: 256 ---------IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                    +  + +++   + + +   +A+ G   + ++ L + +  G+ P       +
Sbjct: 378 QGAEDCISALRAEGVQMSSNIYSVMANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNIL 437

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A   +GR +EA ++++ + E+G+ P    Y  L+K  ++         +   ME +G 
Sbjct: 438 INAFGIAGRHLEALSIYDHIIENGINPDIVTYTTLMKALIRAKKFTKVPELYQHMELAGC 497

Query: 367 LPDEHTYSLL 376
            PD     +L
Sbjct: 498 TPDRKAREML 507


>gi|242094172|ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
 gi|241915799|gb|EER88943.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
          Length = 429

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/382 (40%), Positives = 219/382 (57%), Gaps = 24/382 (6%)

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           Q  G  P +  YA +I ALS +GR +EAEA+  E++  G +P    YNALL+G +   +L
Sbjct: 2   QASGGRPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAHL 61

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A+ ++ +M   GV  +  TY+LL+ AYA AGR E +  VL EM     + ++  YS +
Sbjct: 62  RLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSML 121

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +  YRD G W++   ++ EM+  GVE D   Y+ +IDTFGKY  L  A   FD+M +EGI
Sbjct: 122 VRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGI 181

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  TWN LI  H + G   RA   F  MQE G +P    + ++I+ LGEQ +W+++K+
Sbjct: 182 KPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKK 241

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------------------- 568
           L   M+ +G   +   Y  LVDIYGQ G F DA EC+                       
Sbjct: 242 LFDGMKNRGFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYA 301

Query: 569 -EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
            +GL +Q VN  ++M  +G +P+ + LN LINAFG   R  EA AV Q++K++G+ PDVV
Sbjct: 302 QQGLCEQTVNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVV 361

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           TYTTLMK  +R  KF KV   Y
Sbjct: 362 TYTTLMKTFMRAKKFEKVSEVY 383



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 2/314 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  L+ A AR   LE +  ++ +MR+ G   D   YS++++ L R N +    +  L  
Sbjct: 82  TYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVR-LYRDNGMWKKAID-LVM 139

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E++   +ELD ++ + +I  F K G  + A R     +  G+ P  +T+ A+I      G
Sbjct: 140 EMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTWNALIQWHCRVG 199

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A   F  ++E G+ P  K +  ++    + G   + + +   M+  G       Y+
Sbjct: 200 NMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNRGFKESGAVYA 259

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D Y   G +  AR  +  +   + + +  ++  +   Y  +G  ++T  VL+ M+  
Sbjct: 260 VLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQTVNVLQLMEEE 319

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G EP+    N++I+ FG       A+A F  +   G+ PD +T+ TL+    +  ++++ 
Sbjct: 320 GFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKV 379

Query: 495 EELFEEMQERGYFP 508
            E++ EM+  G  P
Sbjct: 380 SEVYREMERAGCTP 393



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 183/406 (45%), Gaps = 13/406 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            Y  LI A +R     +A  L+ +MR+ G   D  +Y+ +++ L         L  +L  
Sbjct: 12  AYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAH--LRLADRLLL 69

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  D +  + +    ++  +A+AG    +   LG  +  G+   TA Y+ ++    ++G
Sbjct: 70  QMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSMLVRLYRDNG 129

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A  +  E++E G++   K Y+ L+  + K G L DA  V  +M   G+ PD  T++
Sbjct: 130 MWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEGIKPDISTWN 189

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI  +   G  + A      M+     P+  I+  I++   ++G+W    ++   MK+ 
Sbjct: 190 ALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMKNR 249

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G +     Y V++D +G+Y     A      + +E ++     +  L + + + G  ++ 
Sbjct: 250 GFKESGAVYAVLVDIYGQYGHFRDARECIAALRAENMQLSPRVFCVLANAYAQQGLCEQT 309

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + + M+E G+ P     N++IN  G   R  +   +  +++  G+ P+VVTYTTL+  
Sbjct: 310 VNVLQLMEEEGFEPNLVMLNLLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKT 369

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + ++ +F+   E            +R M   G  P   A   L +A
Sbjct: 370 FMRAKKFEKVSE-----------VYREMERAGCTPDRKAREMLHDA 404



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 11/273 (4%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+ SG  P    Y+ LI A + AGR   A  +L EM     +P++  Y+ +L G      
Sbjct: 1   MQASGGRPSSGAYARLIRALSRAGRALEAEALLLEMRRHGPRPDAAHYNALLEGLLAAAH 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +   ++L +M   GV  +   Y +++  + +   L  +      M   GI  DT  ++ 
Sbjct: 61  LRLADRLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRRGIRLDTAGYSM 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+  +   G + +A +L  EMQE G       Y+ +I+  G+  +  D +R+   MRA+G
Sbjct: 121 LVRLYRDNGMWKKAIDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRVFDKMRAEG 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + P++ T+  L+  +           C  G   +A+  F  M+ +G+ P       +I+ 
Sbjct: 181 IKPDISTWNALIQWH-----------CRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISR 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            GE  +  E   +   MK  G K     Y  L+
Sbjct: 230 LGEQGKWDEIKKLFDGMKNRGFKESGAVYAVLV 262


>gi|413934890|gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
          Length = 504

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 224/394 (56%), Gaps = 24/394 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D ++++  L   Q  G  P  + YA +I ALS +GR +EAEA+  E++  G +P    YN
Sbjct: 68  DLARSLGLLADMQASGGRPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYN 127

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY+LL+ AYA AGR E +  VL EM   
Sbjct: 128 ALLEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRW 187

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   Y+ +IDTFGKY  L  A
Sbjct: 188 GIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADA 247

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M +EG+ PD  TWN LI  H + G   RA   F  MQE G +P    + ++I+ 
Sbjct: 248 RRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISR 307

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL----------- 568
           LGEQ +W+++K+L   M  +G   +   Y  LVDIYGQ G F DA +C+           
Sbjct: 308 LGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLL 367

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                        +GL +Q VN  ++M  +G +P+ + LNSLINAFG   R  EA AV Q
Sbjct: 368 PRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQ 427

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++K++G+ PDVVTYTTLMK  +R  KF KV   Y
Sbjct: 428 HIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVY 461



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 2/314 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  L+ A AR   LE +  ++ +MR+ G   D   YS++++ L R N +       L  
Sbjct: 160 TYTLLLGAYARAGRLEDSWWVLGEMRRWGIRLDTAGYSMLVR-LYRDNGMWKKATD-LVM 217

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E++   +ELD ++ + +I  F K G  + A R     +  G+ P  +T+ A+I      G
Sbjct: 218 EMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVG 277

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A   F  ++E G+ P  K +  ++    + G   + + +   M   G       Y+
Sbjct: 278 NMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYA 337

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D Y   G +  A+  +  +   + +    ++  I   Y  +G  ++T  VL+ M+  
Sbjct: 338 ILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEE 397

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G EP+    N +I+ FG       A+A F  +   G+ PD +T+ TL+    +  ++++ 
Sbjct: 398 GFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKV 457

Query: 495 EELFEEMQERGYFP 508
            E++ EM+  G  P
Sbjct: 458 SEVYREMERAGCAP 471



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 171/393 (43%), Gaps = 7/393 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTPLT----YNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA  L    +RL P      YNAL+        L  A  L+ +M 
Sbjct: 91  YARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNALLEGLLAAAHLRLADLLLLQMA 150

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y+L++ +  R  +++ S    +  E+    I LD    + ++  +   G 
Sbjct: 151 DDGVARNRRTYTLLLGAYARAGRLEDSWW--VLGEMRRWGIRLDTAGYSMLVRLYRDNGM 208

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q VG+      Y+ +I      G+  +A  +F++++  G++P    +NA
Sbjct: 209 WKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNA 268

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G +K A    + M+  G+ PD   + ++I      G+W+  + +   M    
Sbjct: 269 LIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRG 328

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  +Y+ ++  Y   G ++     +  +++   +     + V+ + + +       +
Sbjct: 329 FKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTV 388

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  EG EP+ +  N+LI+     GR+  A  +F+ +++ G  P   TY  ++   
Sbjct: 389 NVLQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTF 448

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
              +++E V  +   M   G  P+      L D
Sbjct: 449 MRAKKFEKVSEVYREMERAGCAPDRKAREMLHD 481



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 38/253 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +YS LI   G+  +L +A  +  + R   +     T+NALI    R  ++++AL   + M
Sbjct: 230 IYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSM 289

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDS--------------------SLLQKLYKE---- 255
           +++G + D   + ++I  L    K D                     ++L  +Y +    
Sbjct: 290 QEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHF 349

Query: 256 ---------IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                    +  +  +L  ++   +   +A+ G   + +  L + +  G  P      ++
Sbjct: 350 RDAQDCIAALRAENTQLLPRVFCVIANAYAQQGLCEQTVNVLQLMEEEGFEPNLVMLNSL 409

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A   +GR +EA AVF+ +K+SG+ P    Y  L+K +++    +    V  EMER+G 
Sbjct: 410 INAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGC 469

Query: 367 LPDEHTYSLLIDA 379
            PD     +L DA
Sbjct: 470 APDRKAREMLHDA 482


>gi|413934892|gb|AFW69443.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
          Length = 561

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 221/379 (58%), Gaps = 13/379 (3%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D ++++  L   Q  G  P  + YA +I ALS +GR +EAEA+  E++  G +P    YN
Sbjct: 68  DLARSLGLLADMQASGGRPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYN 127

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY+LL+ AYA AGR E +  VL EM   
Sbjct: 128 ALLEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRW 187

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   Y+ +IDTFGKY  L  A
Sbjct: 188 GIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADA 247

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M +EG+ PD  TWN LI  H + G   RA   F  MQE G +P    + ++I+ 
Sbjct: 248 RRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISR 307

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ----- 574
           LGEQ +W+++K+L   M  +G   +   Y  LVDIYGQ G F DA +C+  L  +     
Sbjct: 308 LGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLL 367

Query: 575 ------AVNAF--RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                   NA+  ++M  +G +P+ + LNSLINAFG   R  EA AV Q++K++G+ PDV
Sbjct: 368 PRVFCVIANAYAQQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDV 427

Query: 627 VTYTTLMKALIRVDKFHKV 645
           VTYTTLMK  +R  KF KV
Sbjct: 428 VTYTTLMKTFMRAKKFEKV 446



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 163/369 (44%), Gaps = 18/369 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTPLT----YNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA  L    +RL P      YNAL+        L  A  L+ +M 
Sbjct: 91  YARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNALLEGLLAAAHLRLADLLLLQMA 150

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y+L++ +  R  +++ S    +  E+    I LD    + ++  +   G 
Sbjct: 151 DDGVARNRRTYTLLLGAYARAGRLEDSWW--VLGEMRRWGIRLDTAGYSMLVRLYRDNGM 208

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q VG+      Y+ +I      G+  +A  +F++++  G++P    +NA
Sbjct: 209 WKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNA 268

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G +K A    + M+  G+ PD   + ++I      G+W+  + +   M    
Sbjct: 269 LIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRG 328

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  +Y+ ++  Y   G ++     +  +++   +     + V+ + + +        
Sbjct: 329 FKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQ-------- 380

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  EG EP+ +  N+LI+     GR+  A  +F+ +++ G  P   TY  ++   
Sbjct: 381 ---QLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTF 437

Query: 521 GEQERWEDV 529
              +++E V
Sbjct: 438 MRAKKFEKV 446



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 24/235 (10%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +YS LI   G+  +L +A  +  + R   +     T+NALI    R  ++++AL   + M
Sbjct: 230 IYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSM 289

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ---LLNDVIVGFA 276
           +++G + D   + ++I  L    K D   ++KL+  +     +  G    +L D+   + 
Sbjct: 290 QEEGMYPDPKIFVMIISRLGEQGKWDE--IKKLFDGMNNRGFKESGAVYAILVDIYGQYG 347

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              DA   +  L  A+   L P+      V   ++N+     A+ + EE    G +P   
Sbjct: 348 HFRDAQDCIAAL-RAENTQLLPR------VFCVIANA----YAQQLMEE---EGFEPNLV 393

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
             N+L+  +   G   +A  V   ++ SG+ PD  TY+ L+  +  A ++E   I
Sbjct: 394 MLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSI 448


>gi|413934891|gb|AFW69442.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
          Length = 507

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 221/379 (58%), Gaps = 13/379 (3%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D ++++  L   Q  G  P  + YA +I ALS +GR +EAEA+  E++  G +P    YN
Sbjct: 68  DLARSLGLLADMQASGGRPSGSAYARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYN 127

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL+G +   +L+ A+ ++ +M   GV  +  TY+LL+ AYA AGR E +  VL EM   
Sbjct: 128 ALLEGLLAAAHLRLADLLLLQMADDGVARNRRTYTLLLGAYARAGRLEDSWWVLGEMRRW 187

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + ++  YS ++  YRD G W++   ++ EM+  GVE D   Y+ +IDTFGKY  L  A
Sbjct: 188 GIRLDTAGYSMLVRLYRDNGMWKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADA 247

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M +EG+ PD  TWN LI  H + G   RA   F  MQE G +P    + ++I+ 
Sbjct: 248 RRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISR 307

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ----- 574
           LGEQ +W+++K+L   M  +G   +   Y  LVDIYGQ G F DA +C+  L  +     
Sbjct: 308 LGEQGKWDEIKKLFDGMNNRGFKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLL 367

Query: 575 ------AVNAF--RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                   NA+  ++M  +G +P+ + LNSLINAFG   R  EA AV Q++K++G+ PDV
Sbjct: 368 PRVFCVIANAYAQQLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDV 427

Query: 627 VTYTTLMKALIRVDKFHKV 645
           VTYTTLMK  +R  KF KV
Sbjct: 428 VTYTTLMKTFMRAKKFEKV 446



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/369 (21%), Positives = 163/369 (44%), Gaps = 18/369 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTPLT----YNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R+ +  EA  L    +RL P      YNAL+        L  A  L+ +M 
Sbjct: 91  YARLIRALSRAGRALEAEALLLEMRRLGPRPEAAHYNALLEGLLAAAHLRLADLLLLQMA 150

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   +   Y+L++ +  R  +++ S    +  E+    I LD    + ++  +   G 
Sbjct: 151 DDGVARNRRTYTLLLGAYARAGRLEDSWW--VLGEMRRWGIRLDTAGYSMLVRLYRDNGM 208

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   Q VG+      Y+ +I      G+  +A  +F++++  G++P    +NA
Sbjct: 209 WKKATDLVMEMQEVGVELDVKIYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNA 268

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + ++G +K A    + M+  G+ PD   + ++I      G+W+  + +   M    
Sbjct: 269 LIQWHCRVGNMKRALRFFTSMQEEGMYPDPKIFVMIISRLGEQGKWDEIKKLFDGMNNRG 328

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  +Y+ ++  Y   G ++     +  +++   +     + V+ + + +        
Sbjct: 329 FKESGAVYAILVDIYGQYGHFRDAQDCIAALRAENTQLLPRVFCVIANAYAQ-------- 380

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  EG EP+ +  N+LI+     GR+  A  +F+ +++ G  P   TY  ++   
Sbjct: 381 ---QLMEEEGFEPNLVMLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTF 437

Query: 521 GEQERWEDV 529
              +++E V
Sbjct: 438 MRAKKFEKV 446



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 24/235 (10%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +YS LI   G+  +L +A  +  + R   +     T+NALI    R  ++++AL   + M
Sbjct: 230 IYSGLIDTFGKYGQLADARRMFDKMRAEGVRPDISTWNALIQWHCRVGNMKRALRFFTSM 289

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ---LLNDVIVGFA 276
           +++G + D   + ++I  L    K D   ++KL+  +     +  G    +L D+   + 
Sbjct: 290 QEEGMYPDPKIFVMIISRLGEQGKWDE--IKKLFDGMNNRGFKESGAVYAILVDIYGQYG 347

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              DA   +  L  A+   L P+      V   ++N+     A+ + EE    G +P   
Sbjct: 348 HFRDAQDCIAAL-RAENTQLLPR------VFCVIANA----YAQQLMEE---EGFEPNLV 393

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
             N+L+  +   G   +A  V   ++ SG+ PD  TY+ L+  +  A ++E   I
Sbjct: 394 MLNSLINAFGTAGRHLEALAVFQHIKDSGMSPDVVTYTTLMKTFMRAKKFEKVSI 448


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 178/592 (30%), Positives = 285/592 (48%), Gaps = 43/592 (7%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           +  LLN L++    E A  L           F+  ++ +  P  + +S L N        
Sbjct: 12  YNSLLNALAKAGQCEEAQLL-----------FEELKAAKWTPDVVSYSCLINSLGRAGKW 60

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNA 198
           + A  VV+ +Q    C      Y+ L+  LG++ +  EA  L    R     P   TYN 
Sbjct: 61  EAALEVVAEMQAKG-CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNC 119

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           LIS   +   L +A  L ++MR+ G   D   Y+ +I  L +  +   ++  +L +E+E 
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM--ELLEEMER 177

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                D    + +I G  K G+  KA +     +  G  P + T+ A++ AL  +GR  +
Sbjct: 178 HGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDD 237

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  + +E+KE G+KP    YNAL+ G+ K+G L +A  ++ EM+R+G  PD  TYS LI 
Sbjct: 238 ALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLIT 297

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
               A + + A  VLK+ME     P++  Y+ ++ G    G      ++   MKS G  P
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   Y+ +I   GK   +  A   F+ M S GI+PD  T+ ++I    K G+ D A+ LF
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM+ +G  P   TYN  +N LG   R+++ +++  +M+  GLLP+V TY  L+    ++
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKT 477

Query: 559 GRFDDAI-------------------ECLEGLS-----DQAVNAFRVMRTDGLKPSNLAL 594
              DDA                    ECLE L+     D+A    +   + GL P   + 
Sbjct: 478 KEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSY 537

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N+LI+A  +  R +EAF  L+ +KE G KPD+V+Y++L+ AL +  +    F
Sbjct: 538 NALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 230/467 (49%), Gaps = 26/467 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+L++A A+    E+A  L  +++   +  D ++YS +I SL R  K +++L  ++ 
Sbjct: 10  VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAAL--EVV 67

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++    + +    N ++    KAG   +A+R L   +  G  P   TY  +I+ L  +
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA  +F E++E G  P T  YN+L+ G  K+G  + A  ++ EMER G  PD  TY
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI      G    A  + +EM+    KP+S  ++ ++      G      ++L EMK 
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV+P    YN +I  FGK   L  A    D M   G +PD +T++ LI    K  + D 
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++ ++M++ G  P T TYN +IN LG+     D  RL   M+++G  P+VVTY+TL+ 
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 554 IYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKP 589
             G++ R + A    E                        G  D A   F  MR  GL P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +  N+ +N+ G   R  EA  + + MKE+GL PDV TY  L+  L
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 233/483 (48%), Gaps = 18/483 (3%)

Query: 159 CYSYELLYSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C      Y+ LI+ LG   RS+K  E     +R    P  +TY++LI+   ++ +  KA 
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L  +M++ G   D I ++ ++ +L +  ++D +L  +L  E++   ++      N +I 
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL--ELLDEMKERGVKPGVVTYNALIA 262

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF K GD  +A   L   +  G  P   TY+ +IT L  + +  EA  V +++++ G  P
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T  YN L+ G  K G L DA  +   M+  G  PD  TYS LI A   A R ESA ++ 
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +EME    +P+ F Y  I+      G+     ++  EM+  G+ PD   YN  +++ G+ 
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A   F+ M   G+ PD  T++ L+    K    D A  L +E+ E+G    +  +
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           +  + +L      ++   LL    ++GL P   +Y  L+D   ++GR  +A   LE L +
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           Q           G KP  ++ +SLI+A G+  +   AF +L+ M + GLK    +Y+ L+
Sbjct: 563 Q-----------GGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611

Query: 634 KAL 636
           + L
Sbjct: 612 RKL 614



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 166/312 (53%), Gaps = 11/312 (3%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    YN+LL    K G  ++A+ +  E++ +   PD  +YS LI++   AG+WE+A  V
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           + EM+    KPN + Y+ ++      G++    ++L EM+ +G  PD   YN +I T GK
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              L  A   F  M   G  PDT T+N+LI    K GR  +A EL EEM+  G  P   T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +I  LG+        +L   M+ +G  P+ +T+T L+D  G++GR DDA+E L+   
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLD--- 243

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                    M+  G+KP  +  N+LI  FG+     EA+ +L  MK NG KPDVVTY+ L
Sbjct: 244 --------EMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCL 295

Query: 633 MKALIRVDKFHK 644
           +  LI+  +  +
Sbjct: 296 ITGLIKASQLDE 307



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 11/212 (5%)

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   YN +++   K      A   F+ + +    PD ++++ LI+   + G+++ A E+
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             EMQ +G  P   TYN +++ LG+  ++++  RLL  MR  G +P+V TY  L+   G+
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR  +A              F  MR  G  P     NSLI   G+  R  +A  +L+ M
Sbjct: 127 AGRLSEAF-----------TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + +G  PDV+TY++L+  L +  +  K F  +
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLF 207



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 43/319 (13%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LT 195
           S +D A  V+  ++K   C    + Y+ LI+ LG++  L +A  L  R +     P  +T
Sbjct: 303 SQLDEACQVLKKMEKEG-CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y+ LI+A  +   +E A  L  +M   G   D   Y  +I  L +  ++D +   +L+ E
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDA--DRLFSE 419

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D    N  +    + G   +A +     +  GL P  ATY A++  LS +  
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479

Query: 316 TIEAEAVFEELKESG-----------------------------------LKPRTKAYNA 340
             +A  + +EL E G                                   L P   +YNA
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K G + +A   + +++  G  PD  +YS LI A    G+ ++A  +L+EM    
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599

Query: 401 AKPNSFIYSRILAGYRDRG 419
            K +   YS ++   +D G
Sbjct: 600 LKLSPRSYSNLVRKLQDWG 618


>gi|297801170|ref|XP_002868469.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314305|gb|EFH44728.1| hypothetical protein ARALYDRAFT_330235 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 448

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/397 (33%), Positives = 211/397 (53%), Gaps = 27/397 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR- 334
            + G+ ++AM  +     +G  P   +Y ++I  L++ GRT+EA+A+F+E+    +    
Sbjct: 10  CRTGEINEAMSLVAEIDSLGSHPDPLSYVSLIETLASLGRTLEADALFQEVVRFRINGSY 69

Query: 335 -TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
             + YNALL GY++ G L+ A  V+  M+   V  ++ T  +L++ Y +AGR E +  V+
Sbjct: 70  SVRLYNALLSGYLRKGQLELAVRVLDHMKEENVDKNQETCEILLNYYVSAGRLEESWRVV 129

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM+    + NSF+Y +I+  YRD G W++   +++E+K  G+  D   YN +IDTFGKY
Sbjct: 130 NEMKKRMFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIKEIGLPMDVEIYNSIIDTFGKY 189

Query: 454 NCLHHAMAAFDRMLSEG-IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
             L  A+   ++M S    +P+  TWN+LI  H   G  D A ELF  MQ++G +P    
Sbjct: 190 GELDEALDVLEKMQSSSDSKPNISTWNSLIRWHCHHGALDMALELFTMMQDQGLYPDPRM 249

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL---- 568
           +  +I  LGE   W  + +   +++ +        Y  LV I GQ G F D  E +    
Sbjct: 250 FVNLITRLGENGNWNMIDKHFESIKCKEHKDTRAIYAALVQIIGQFGSFQDVEELVGKLK 309

Query: 569 --------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                               +GL  Q V   ++M  +G++P+ + LN LINAFG   +  
Sbjct: 310 SQGVAPSANLFCTFANAYAQQGLYKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHM 369

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           EA ++  ++KE+G  PDVVTY+TLMKA  R  K+ KV
Sbjct: 370 EALSIYHHIKESGFTPDVVTYSTLMKAFTRAKKYEKV 406



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/449 (21%), Positives = 191/449 (42%), Gaps = 61/449 (13%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ---SLTRTNKIDSSLLQKL 252
           YN  I  C R  ++ +A++L++++   G H D ++Y  +I+   SL RT + D+     L
Sbjct: 2   YNRWIRYCCRTGEINEAMSLVAEIDSLGSHPDPLSYVSLIETLASLGRTLEADA-----L 56

Query: 253 YKEIECDKIELDG----QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           ++E+   +  ++G    +L N ++ G+ + G    A+R L   +   +     T   ++ 
Sbjct: 57  FQEVV--RFRINGSYSVRLYNALLSGYLRKGQLELAVRVLDHMKEENVDKNQETCEILLN 114

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
              ++GR  E+  V  E+K+   +  +  Y  +++ Y   G  K A  +V E++  G+  
Sbjct: 115 YYVSAGRLEESWRVVNEMKKRMFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIKEIGLPM 174

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYSRILAGYRDRGEWQRTFQV 427
           D   Y+ +ID +   G  + A  VL++M+ S  +KPN   ++ ++  +   G      ++
Sbjct: 175 DVEIYNSIIDTFGKYGELDEALDVLEKMQSSSDSKPNISTWNSLIRWHCHHGALDMALEL 234

Query: 428 LKEMKSSGVEPD---------------------THF--------------YNVMIDTFGK 452
              M+  G+ PD                      HF              Y  ++   G+
Sbjct: 235 FTMMQDQGLYPDPRMFVNLITRLGENGNWNMIDKHFESIKCKEHKDTRAIYAALVQIIGQ 294

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +           ++ S+G+ P    + T  + + + G Y +  ++ + M+  G  P    
Sbjct: 295 FGSFQDVEELVGKLKSQGVAPSANLFCTFANAYAQQGLYKQTVKVLKMMENEGIEPNLIM 354

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            N++IN  G   +  +   +  +++  G  P+VVTY+TL+  + ++ +++   E      
Sbjct: 355 LNVLINAFGTAGKHMEALSIYHHIKESGFTPDVVTYSTLMKAFTRAKKYEKVPEI----- 409

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAF 601
                 FR M   G      A   L NAF
Sbjct: 410 ------FREMEASGCTADRKARQLLQNAF 432



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 156/368 (42%), Gaps = 13/368 (3%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH- 171
           V F++  SY      L+++LL         ++LA  V+  +++ N+  + E    +L + 
Sbjct: 61  VRFRINGSY---SVRLYNALLSGYLRK-GQLELAVRVLDHMKEENVDKNQETCEILLNYY 116

Query: 172 -ALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            + GR E+ +      +++  RL    Y  +I     N   +KAL ++ ++++ G   D 
Sbjct: 117 VSAGRLEESWRVVNEMKKRMFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIKEIGLPMDV 176

Query: 229 INYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             Y+ +I +  +  ++D +L  L+K+    +      +    N +I      G    A+ 
Sbjct: 177 EIYNSIIDTFGKYGELDEALDVLEKMQSSSDSKP---NISTWNSLIRWHCHHGALDMALE 233

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
              M Q  GL P    +  +IT L  +G     +  FE +K    K     Y AL++   
Sbjct: 234 LFTMMQDQGLYPDPRMFVNLITRLGENGNWNMIDKHFESIKCKEHKDTRAIYAALVQIIG 293

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G  +D E +V +++  GV P  + +    +AYA  G ++    VLK ME    +PN  
Sbjct: 294 QFGSFQDVEELVGKLKSQGVAPSANLFCTFANAYAQQGLYKQTVKVLKMMENEGIEPNLI 353

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           + + ++  +   G+      +   +K SG  PD   Y+ ++  F +          F  M
Sbjct: 354 MLNVLINAFGTAGKHMEALSIYHHIKESGFTPDVVTYSTLMKAFTRAKKYEKVPEIFREM 413

Query: 467 LSEGIEPD 474
            + G   D
Sbjct: 414 EASGCTAD 421



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 47/267 (17%)

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD--------------------------- 439
           +Y+R +      GE      ++ E+ S G  PD                           
Sbjct: 1   MYNRWIRYCCRTGEINEAMSLVAEIDSLGSHPDPLSYVSLIETLASLGRTLEADALFQEV 60

Query: 440 ----------THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                        YN ++  + +   L  A+   D M  E ++ +  T   L++ +   G
Sbjct: 61  VRFRINGSYSVRLYNALLSGYLRKGQLELAVRVLDHMKEENVDKNQETCEILLNYYVSAG 120

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R + +  +  EM++R +   +  Y  +I +  +   W+    ++  ++  GL  +V  Y 
Sbjct: 121 RLEESWRVVNEMKKRMFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIKEIGLPMDVEIYN 180

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +++D +G+ G  D+A++ LE          ++  +   KP+    NSLI           
Sbjct: 181 SIIDTFGKYGELDEALDVLE----------KMQSSSDSKPNISTWNSLIRWHCHHGALDM 230

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKAL 636
           A  +   M++ GL PD   +  L+  L
Sbjct: 231 ALELFTMMQDQGLYPDPRMFVNLITRL 257


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 259/525 (49%), Gaps = 22/525 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           ++++L   C +N   +  + +   + +   C    + Y+ +I+ L + +++ EA      
Sbjct: 82  YNTVLHGFCKANRVENALWLLEQMVMRG--CPPDVVSYTTVINGLCKLDQVDEACRVMDK 139

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ +  +   +TY  L+    R  DL+ A+ L+ KM + GY  + I Y+ ++  L    K
Sbjct: 140 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRK 199

Query: 244 IDSSLLQKLYKEIE-CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +DS+L  +L+KE+E       D    + ++    K+G    A R +      G SP   T
Sbjct: 200 LDSAL--QLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVT 257

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y++++  L  +G+  EA A+ + +  SG  P    YN ++ G+ K+G + +A  ++ EM 
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  P+  TY++L+DA+   G+ E A  +++ M      PN F Y+ +L  +  + E +
Sbjct: 318 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 377

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           R  Q+L  M   G  P+   YN +I    K   +H  +   ++MLS    PD +T+NT+I
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGL 541
           D   K  R D A ELF  +QE G  P   TYN +++ L +  R++  + LL  M R QG 
Sbjct: 438 DAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC 497

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+++TY T++D   +S R            D+A   F  M +DGL P ++  + +I++ 
Sbjct: 498 SPDIITYNTVIDGLCKSKRV-----------DRAYKLFLQMLSDGLAPDDVTYSIVISSL 546

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + +   EA  VL+ M +NG  P  +TY TL+    +     K  
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 262/538 (48%), Gaps = 32/538 (5%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A +  S+L+ LC +    D   AV+ + +    C    + Y+ +I+ L +S++L +A  L
Sbjct: 10  AGVHKSILRGLCDAGQCSD---AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRL 66

Query: 186 SQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            +        P   +YN ++    + + +E AL L+ +M   G   D ++Y+ VI  L +
Sbjct: 67  LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCK 126

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +++D +  ++ K+ +      +   G L++    GF + GD   A+  +      G  P
Sbjct: 127 LDQVDEACRVMDKMIQRGCQPNVITYGTLVD----GFCRVGDLDGAVELVRKMTERGYRP 182

Query: 299 KTATYAAVITALSNSGRTIE-AEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEF 356
              TY  ++  L  SGR ++ A  +F+E++ESG   P    Y+ ++   VK G + DA  
Sbjct: 183 NAITYNNIMHGLC-SGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 241

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +V  M   G  P+  TYS L+     AG+ + A  +L+ M  S   PN   Y+ I+ G+ 
Sbjct: 242 LVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 301

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G     + +L+EM   G +P+   Y V++D F K      A+   + M+ +G  P+  
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N+L+D   K    +RA +L   M ++G  P   +YN +I  L +  +  +   LL  M
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            +   +P++VT+ T++D   ++ R D A E            F +++  G  P+ +  NS
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYE-----------LFNLIQESGCTPNLVTYNS 470

Query: 597 LINAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
           L++   + +R  +A  +L+ M ++ G  PD++TY T++  L    RVD+ +K+F   L
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 235/519 (45%), Gaps = 26/519 (5%)

Query: 115 FKLAESYRAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           FK  E   + P  +  + +++ +L  S    D    V + + K   C    + YS L+H 
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG--CSPNVVTYSSLLHG 264

Query: 173 LGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L ++ KL EA  L QR      +P  +TYN +I    +   +++A +L+ +M   G   +
Sbjct: 265 LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 324

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL-NDVIVGFAKAGDASKAMR 286
            + Y++++ +  +  K + ++      E+  +K  +      N ++  F K  +  +A +
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIG---LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   +Y  VI  L  + +  E   + E++  +   P    +N ++    
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA-KPNS 405
           K   +  A  + + ++ SG  P+  TY+ L+     + R++ A  +L+EM       P+ 
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y+ ++ G        R +++  +M S G+ PD   Y+++I +  K+  +  A    + 
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ML  G +P  IT+ TLID   K G  D+A E+ + +  +G +P   T++I I+ L ++ R
Sbjct: 562 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGR 621

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
                 LL  M   GL+P+ VTY TL+  +  + R +D           AV+ F VMR  
Sbjct: 622 LRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED-----------AVDLFEVMRQC 670

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFA-VLQYMKENGLK 623
           G +P N    +L+    + +   +  A V + M + G K
Sbjct: 671 GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 709



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 160/341 (46%), Gaps = 26/341 (7%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +   GLK     + ++L+G    G   DA     EM ++   PD  TY+ +I+  + + R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +L+EM  +   PN F Y+ +L G+      +    +L++M   G  PD   Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K + +  A    D+M+  G +P+ IT+ TL+D   + G  D A EL  +M ERG
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL-PNVVTYTTLVDIYGQSGRFDDA 564
           Y P   TYN +++ L    + +   +L   M   G   P+V TY+T+VD   +SG+ DDA
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 565 IE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
                                     C  G  D+A    + M   G  P+ +  N++I+ 
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +  R  EA+ +L+ M + G +P+VVTYT L+ A  +  K
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 234/480 (48%), Gaps = 33/480 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNK--IDSSLLQK 251
           +Y   I+ C R    EKAL L+ ++  Q+G   +   Y+  I++    ++  I  SLL++
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLRE 205

Query: 252 LY-KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +  +E+  D+I       N  I    + G   + +  L     VGL+P   TY +VIT  
Sbjct: 206 MADREVVPDEISY-----NSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGC 260

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G+  EA +V  E+   GL P T +YN  ++   + G  K+A  V+ +ME  GV PD 
Sbjct: 261 GKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDV 320

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            +Y   I A    G+WE++  +L EM      PN+  ++  +      G+W++  ++L+E
Sbjct: 321 ISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLRE 380

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           + + G+ PD   +N  I    K      A+     M ++ ++PD I++N+ I+   K G+
Sbjct: 381 VTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQ 440

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           ++ A EL  +M  +G  P   + NI I   GE+ RW++   LL  M AQGL PNV+TY +
Sbjct: 441 WEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNS 500

Query: 551 LVDIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDG 586
            +   G+ G+++ A++ L                         G   +AV   R M   G
Sbjct: 501 AIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQG 560

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           L P  ++  + I+A+G++ +   A  +L+ M   GL P+V+TY +++KA  R  ++ K  
Sbjct: 561 LTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKAL 620



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 222/453 (49%), Gaps = 13/453 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YN+ I AC R    E+ + L+ +M   G   D I Y+ VI    +  +   +L   + 
Sbjct: 216 ISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEAL--SVL 273

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    +  +    N  I    ++G   +A+  L   +  G++P   +Y A I A    
Sbjct: 274 TEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGG 333

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   +  + +E+   G+ P T  +N+ +    K G  + A  ++ E+   G+ PD  ++
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSF 393

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +  I A   +GRW+ A  +LKEM     KP++  Y+  +      G+W+   ++ ++M +
Sbjct: 394 NSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPT 453

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+    N+ I   G+       +    +M ++G+ P+ IT+N+ I    K G++++
Sbjct: 454 KGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEK 513

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L  +M+E    P + TYN  I    ++ RW++   LL  M  QGL P+V++YT  +D
Sbjct: 514 ALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAID 573

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            YG++G+++ A+E L           R M T GL P+ +  NS+I A G      +A  +
Sbjct: 574 AYGKNGQWERAVELL-----------RQMPTKGLTPNVITYNSVIKACGRGGEWEKALDL 622

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           L+ +KE  + PD+++Y   + A  +  ++ +  
Sbjct: 623 LKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 226/477 (47%), Gaps = 18/477 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ +I   G+  +  EA  +L++   + LTP  ++YN  I AC R+   ++A+ ++ +
Sbjct: 251 ITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQ 310

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I+Y   I++     + ++S+   L  E+    +  +    N  IV   K 
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSV--DLLDEMAGRGVAPNTIHFNSAIVACGKG 368

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA+  L     +GL+P   ++ + I A + SGR  EA  + +E+    LKP   +Y
Sbjct: 369 GQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISY 428

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+ ++   K G  + A  +  +M   G+ P+  + ++ I A    GRW+    +L++M  
Sbjct: 429 NSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPA 488

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+  +      G+W++   +L +MK   + PD+  YN  I    K      
Sbjct: 489 QGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKE 548

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+A    M  +G+ PD I++   ID + K G+++RA EL  +M  +G  P   TYN +I 
Sbjct: 549 AVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIK 608

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G    WE    LL  ++   + P++++Y   +   G+ GR+++A++ L          
Sbjct: 609 ACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLL---------- 658

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            R M  +GL P  ++  S I A   +    +A  +L  M  +G+ P   +Y+  ++A
Sbjct: 659 -REMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA 714



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 13/411 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N+ I AC +    EKA+ L+ ++   G   D  +++  I + T++ +   +L  +L KE
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEAL--ELLKE 415

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   +++ D    N  I    K G    A+         GL+P   +    I A    GR
Sbjct: 416 MPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGR 475

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             E   +  ++   GL P    YN+ +K   K G  + A  ++++M+   + PD  TY+ 
Sbjct: 476 WQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNS 535

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            I A +  GRW+ A  +L+EM      P+   Y+  +  Y   G+W+R  ++L++M + G
Sbjct: 536 AIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKG 595

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   YN +I   G+      A+     +    + PD +++N  I    K GR++ A 
Sbjct: 596 LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEAL 655

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L  EM   G  P   +Y   I     +  WE    LL  M A G+ P   +Y+  ++  
Sbjct: 656 DLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEAC 715

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           G+ GR ++A+ CL           R M   GL   N++ + ++ A G+D +
Sbjct: 716 GKGGRREEAV-CL----------VREMAQRGLSHRNISNSLIVEALGDDAK 755



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 174/401 (43%), Gaps = 59/401 (14%)

Query: 305 AVITALSNSGRTIEAEAVFEELKES----------------------------------- 329
           A +   + +G+  EA  + +E+KE                                    
Sbjct: 115 AALREAATTGKWREALGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQE 174

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    YN+ ++        + A  ++ EM    V+PDE +Y+  I A    G+WE  
Sbjct: 175 GVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERV 234

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+EM      P++  Y+ ++ G    G+W+    VL EM + G+ P+T  YN+ I  
Sbjct: 235 IGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRA 294

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            G+      A+    +M S+G+ PD I+++  I      G+++ + +L +EM  RG  P 
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T  +N  I   G+  +WE    LL  + A GL P+  ++ + +    +SGR+ +A+E L+
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414

Query: 570 ------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                   G  + A+   R M T GL P+ ++ N  I A GE  
Sbjct: 415 EMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERG 474

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           R  E   +L+ M   GL P+V+TY + +K   +  ++ K  
Sbjct: 475 RWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL 515


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 230/516 (44%), Gaps = 31/516 (6%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           YSILI    R  +L   F     +L    R+  +  N L+        L +A++ L+ +M
Sbjct: 97  YSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRM 156

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   D ++Y+ +++      + + +L L  +  + +      +      VI GF   
Sbjct: 157 PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTE 216

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA          G+ P   TY  VI  L  +     AE VF+++ + G+KP    Y
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTY 276

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY+ +G  K+   ++ EM   G+ PD +TY  L++   N GR   AR     M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR 336

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN  IY  ++ GY  +G       +L  M  +G+ PD H +N++   + K   +  
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F++M  +G+ PD + +  LID   K GR D A   F +M   G  P    +N ++ 
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT----------------LVDIYGQSGRFD 562
            L   ++WE  K     M  QG+ P+VV + T                L+D+  + G   
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 563 DAI--------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           D I         CL G  D+A  +  VM + GLKP     N+L++ +    R  +A+ V 
Sbjct: 517 DVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           + M  NG+ P VVTY+T++  L    +F +    YL
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/600 (22%), Positives = 249/600 (41%), Gaps = 95/600 (15%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---- 185
           + LLK LC +    +    ++  + +   C    + Y+ L+      ++  EA  L    
Sbjct: 133 NQLLKGLCDAKRLREAMDILIKRMPELG-CTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191

Query: 186 --SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             SQ +   P  ++Y  +I+       ++KA NL  +M   G   + + Y+ VI  L + 
Sbjct: 192 ADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKA 251

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             +D +  + +++++    ++ D    N +I G+   G   + +R L      GL P   
Sbjct: 252 QVVDRA--EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY +++  L N+GR  EA   F+ +   G+KP    Y  L+ GY   G L +   +++ M
Sbjct: 310 TYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369

Query: 362 ERSGVLPDEHTYSL-----------------------------------LIDAYANAGRW 386
             +G+ PD H +++                                   LIDA    GR 
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRV 429

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A +   +M      PN F+++ ++ G     +W++  +   EM + G+ PD  F+N +
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 447 I-------------------------------DTFGKYNCL----HHAMAAFDRMLSEGI 471
           +                                T    +CL      A  + D MLS G+
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  T+NTL+  + + GR D A  +F EM   G  P   TY+ +++ L    R+ + K 
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L  NM   G   N+  Y  +++   ++   D+A +  + L  +    F++  T       
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK---DFQLEIT------- 659

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
              N +I A  +  R+ +A  +   +   GL PDV TY  + + LI    +++F  +FS+
Sbjct: 660 -TFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 168/373 (45%), Gaps = 22/373 (5%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           + ++P   TY+ +I      GR     A F  + +SG +      N LLKG      L++
Sbjct: 88  IKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLRE 147

Query: 354 A-EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK---PNSFIYS 409
           A + ++  M   G  PD  +Y+ L+  + N  R E A  +L  M  S  +   PN   Y+
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G+   G+  + + +  EM   G++P+   Y  +ID   K   +  A   F +M+ +
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++PD  T+N LI  +   G++     + EEM   G  P   TY  ++N L    R  + 
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           +    +M  +G+ PNV  Y  L+  Y   G   +  + L            +M  +GL P
Sbjct: 328 RFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN-----------LMVENGLSP 376

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVD----KF 642
            +   N +  A+ +     EA  +   MK+ GL PDVV +  L+ AL    RVD    KF
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 643 HKVFSSYLFFNIY 655
           +++ +  +  NI+
Sbjct: 437 NQMMNEGVAPNIF 449



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 183/393 (46%), Gaps = 7/393 (1%)

Query: 165 LYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y ILIH     G   ++++   L     L+P    +N + +A A+   +++A+++ +KM
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +Q G   D +N+  +I +L +  ++D ++L+  + ++  + +  +  + N ++ G     
Sbjct: 405 KQQGLSPDVVNFGALIDALCKLGRVDDAVLK--FNQMMNEGVAPNIFVFNSLVYGLCTVD 462

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              KA  F       G+ P    +  ++  L   G+ ++A+ + + ++  G +P   +Y 
Sbjct: 463 KWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYT 522

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+  +G + +A   +  M   G+ PDE TY+ L+  Y  AGR + A  V +EM  +
Sbjct: 523 TLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN 582

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    YS IL G      +    ++   M +SG + +   YN++++   K NC+  A
Sbjct: 583 GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA 642

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  + S+  + +  T+N +I   FK GR + A  LF  +   G  P   TY ++   
Sbjct: 643 FKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAEN 702

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L E+   E+   L   M   G  PN      LV
Sbjct: 703 LIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 26/263 (9%)

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-----------GVEPDTHFYNVM 446
           ++HA+P S I    L     R   +R+     E+  S            V PD   Y+++
Sbjct: 41  LTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSIL 100

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE-LFEEMQERG 505
           I  F +   L H  A F  +L  G   + I  N L+       R   A + L + M E G
Sbjct: 101 IGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELG 160

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNM---RAQGLLPNVVTYTTLVDIYGQSGRFD 562
             P   +YN ++     ++R E+   LL  M   + +   PNVV+Y T+++     G F 
Sbjct: 161 CTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN-----GFFT 215

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                 EG  D+A N F  M   G++P+ +   ++I+   + Q    A  V Q M + G+
Sbjct: 216 ------EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 623 KPDVVTYTTLMKALIRVDKFHKV 645
           KPD  TY  L+   + + K+ +V
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEV 292



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/311 (19%), Positives = 115/311 (36%), Gaps = 37/311 (11%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L+Q  R   + +N ++        + KA  L+  M + G   D I+Y+ +I       +
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +   K    +    ++ D    N ++ G+ +AG    A          G++P   TY
Sbjct: 534 IDEA--AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY------------------ 345
           + ++  L  + R  EA+ ++  +  SG +     YN +L G                   
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 346 -----------------VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
                             K G  +DA  + + +   G++PD  TY L+ +     G  E 
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +   ME S   PNS + + ++     RG+  R    L ++       +     ++I 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771

Query: 449 TFGKYNCLHHA 459
              +    HHA
Sbjct: 772 LLSRDEYHHHA 782


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 230/516 (44%), Gaps = 31/516 (6%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK-M 219
           YSILI    R  +L   F     +L    R+  +  N L+        L +A++++ K M
Sbjct: 97  YSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRM 156

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   D ++Y+ +++      + + +L L  +  + +      +      VI GF   
Sbjct: 157 PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTE 216

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA          G+ P   TY  VI  L  +     AE VF+++ + G+KP    Y
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTY 276

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY+ +G  K+   ++ EM   G+ PD +TY  L++   N GR   AR +   M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIR 336

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN  IY  ++ GY  +G       +L  M  +G+ PD H +N++   + K   +  
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F++M  +G+ PD + +  LID   K GR D A   F +M   G  P    +N ++ 
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT----------------LVDIYGQSGRFD 562
            L   ++WE  K     M  QG+ P+VV + T                L+D+  + G   
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516

Query: 563 DAI--------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             I         CL G  D+A  +  VM + GLKP     N+L++ +    R  +A+ V 
Sbjct: 517 GVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           + M  NG+ P VVTY+T++  L    +F +    YL
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/600 (23%), Positives = 250/600 (41%), Gaps = 95/600 (15%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---- 185
           + LLK LC +    +    +V  + +   C    + Y+ L+      ++  EA  L    
Sbjct: 133 NQLLKGLCDAKRLCEAMDILVKRMPELG-CTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191

Query: 186 --SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             SQ +   P  ++Y  +I+       ++KA NL  +M   G   + + Y+ VI  L + 
Sbjct: 192 ADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKA 251

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             +D +  + +++++    ++ D    N +I G+   G   + +R L      GL P   
Sbjct: 252 QVVDRA--EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY +++  L N+GR  EA  +F+ +   G+KP    Y  L+ GY   G L +   +++ M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369

Query: 362 ERSGVLPDEHTYSL-----------------------------------LIDAYANAGRW 386
             +G+ PD H +++                                   LIDA    GR 
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A +   +M      PN F+++ ++ G     +W++  +   EM + G+ PD  F+N +
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 447 I-------------------------------DTFGKYNCL----HHAMAAFDRMLSEGI 471
           +                                T    +CL      A  + D MLS G+
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  T+NTL+  + + GR D A  +F EM   G  P   TY+ +++ L    R+ + K 
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L  NM   G   N+  Y  +++   ++   D+A +  + L  +    F++  T       
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK---DFQLEIT------- 659

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
              N +I A  +  R+ +A  +   +   GL PDV TY  + + LI    +++F  +FS+
Sbjct: 660 -TFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSA 718



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 168/373 (45%), Gaps = 22/373 (5%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           + ++P   TY+ +I      GR     A F  + +SG +      N LLKG      L +
Sbjct: 88  IKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147

Query: 354 A-EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK---PNSFIYS 409
           A + +V  M   G  PD  +Y+ L+  + N  R E A  +L  M  S  +   PN   Y+
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G+   G+  + + +  EM   G++P+   Y  +ID   K   +  A   F +M+ +
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++PD  T+N LI  +   G++     + EEM   G  P   TY  ++N L    R  + 
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           + L  +M  +G+ PNV  Y  L+  Y   G   +  + L            +M  +GL P
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLN-----------LMVENGLSP 376

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVD----KF 642
            +   N +  A+ +     EA  +   MK+ GL PDVV Y  L+ AL    RVD    KF
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 643 HKVFSSYLFFNIY 655
           +++ +  +  NI+
Sbjct: 437 NQMMNEGVAPNIF 449



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 197/429 (45%), Gaps = 9/429 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           + SLL  LC++    +  +   S ++K         +Y ILIH     G   ++++   L
Sbjct: 311 YGSLLNYLCNNGRCREARFLFDSMIRKG--IKPNVAIYGILIHGYATKGALSEMHDLLNL 368

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L+P    +N + +A A+   +++A+++ +KM+Q G   D +NY  +I +L +  +
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D ++L+  + ++  + +  +  + N ++ G        KA  F       G+ P    +
Sbjct: 429 VDDAVLK--FNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   G+ ++A+ + + ++  G +P   +Y  L+ G+  +G + +A   +  M  
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ PDE TY+ L+  Y  AGR + A  V +EM  +   P    YS IL G      +  
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++   M +SG + +   YN++++   K NC+  A   F  + S+  + +  T+N +I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             FK GR + A  LF  +   G  P   TY ++   L E+   E+   L   M   G  P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 544 NVVTYTTLV 552
           N      LV
Sbjct: 727 NSRMLNALV 735



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 112/289 (38%), Gaps = 61/289 (21%)

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-----------GVEPDTHFYNVM 446
           ++HA+P S I    L     R   +R+     E+  S            V PD   Y+++
Sbjct: 41  LTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSIL 100

Query: 447 IDTFGKYNCLHHAMAAF------------------------------------DRMLSEG 470
           I  F +   L H  A F                                     RM   G
Sbjct: 101 IGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELG 160

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEM---QERGYFPCTTTYNIMINLLGEQERWE 527
             PD +++NTL+       R + A EL   M   Q R   P   +Y I+IN    + + +
Sbjct: 161 CTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVD 220

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
               L   M  +G+ PNVVTYTT++D             C   + D+A   F+ M   G+
Sbjct: 221 KAYNLFLEMMDRGIQPNVVTYTTVIDGL-----------CKAQVVDRAEGVFQQMIDKGV 269

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           KP N   N LI+ +    +  E   +L+ M  +GLKPD  TY +L+  L
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 114/311 (36%), Gaps = 37/311 (11%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L+Q  R   + +N ++        + KA  L+  M + G     I+Y+ +I       +
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +   K    +    ++ D    N ++ G+ +AG    A          G++P   TY
Sbjct: 534 IDEA--AKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY------------------ 345
           + ++  L  + R  EA+ ++  +  SG +     YN +L G                   
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 346 -----------------VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
                             K G  +DA  + + +   G++PD  TY L+ +     G  E 
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +   ME S   PNS + + ++     RG+  R    L ++       +     ++I 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771

Query: 449 TFGKYNCLHHA 459
              +    HHA
Sbjct: 772 LLSRDEYHHHA 782


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/596 (28%), Positives = 282/596 (47%), Gaps = 23/596 (3%)

Query: 57  FTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLN-FLSENSNSESASALASSPSSLNRVE- 114
           + + QN  ++  E+  D    +K  Y F  L + +   NS+S     +  S S LN +E 
Sbjct: 95  YKTAQNLAQDLAENSVD----EKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEK 150

Query: 115 ----FKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL 169
                 LA+    +P  L ++++L ++      +  A  V   +    +  +    Y+IL
Sbjct: 151 ALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNV-FSYNIL 209

Query: 170 IH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGY 224
           I    A G  E     F   +R R  P  +TYN +I A  +   +++A  L+  M  +G 
Sbjct: 210 IRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGL 269

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
             + + Y++VI  L R  +I+ +    +  E++      DG   N ++ G+ K G+  +A
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEET--SGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           +         GL P   TY ++I  +  +G    A   F+++   GL+P    Y +L+ G
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + + G++ +A  +  EM RSG  P   TY+ L++ +  +GR E A  +L+ ME     P+
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              YS I+AG+    E  R FQ+  EM   GV PD   Y+ +I    +   L+ A   F 
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQ 507

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            ML++ + PD  T+ +LI+ + K G  + A  L +EM ++G+ P T TYN++IN L +Q 
Sbjct: 508 EMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQA 567

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLV----DIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           R  + KRLL  +     +PN +TY TL+    DI  +S        C++GL ++A   F 
Sbjct: 568 RTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFE 627

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M     KP+    N +I+    D    +A  + + M + G  P  VT   L+KAL
Sbjct: 628 SMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVV 358
           +A +  V+ + S      +A  + +  K +G  P   +YNA+L   V+    +  AE V 
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM  SGV  +  +Y++LI  +  AG  E      +EME +   PN   Y+ ++  Y   
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
                 F++L+ M   G+EP+   YN++I+   +   +         M  +G  PD +T+
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NTL++ + K G + +A  L  EM   G  P   TY  +IN + +             M  
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL PN VTYT+L++ + Q           +G  D+A   +  M   G  P+ +  N+L+
Sbjct: 372 RGLRPNGVTYTSLINGFSQ-----------KGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N      R  EA  +L+ M+  GL PDVV+Y+T++    R  +  + F
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 170/398 (42%), Gaps = 22/398 (5%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ + ++  L  A   F     + L P  +TY +LI+  ++   +++A  +  +M 
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+    + Y+ ++     + +++ ++   L + +E   +  D    + +I GF +  +
Sbjct: 406 RSGFPPTIVTYNALLNGHCVSGRMEEAI--GLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +        G+SP   TY+++I  L    R  EA  +F+E+    L P    Y +
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTS 523

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K G L +A  +  EM + G LPD  TY++LI+      R   A+ +L ++    
Sbjct: 524 LINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDE 583

Query: 401 AKPNSFIYSRIL---------------AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           + PN   Y  ++                G+  +G      QV + M     +P+   YNV
Sbjct: 584 SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNV 643

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I    +   +H A   +  M+  G  P T+T   L+   +  G  ++   +  ++    
Sbjct: 644 IIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSC 703

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                     ++ +  ++   + V  LL  M   G LP
Sbjct: 704 KLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 226/455 (49%), Gaps = 15/455 (3%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
             T+  LI    R  D+  A  L+ +M + G   + I +++VI+ L    K+DS+L  +L+
Sbjct: 878  FTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSAL--ELF 935

Query: 254  KEIE-CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            KE+E       D    + ++    K+G    A R +      G SP   TY++++  L  
Sbjct: 936  KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995

Query: 313  SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            +G+  EA A+ + +  SG  P    YN ++ G+ K+G + +A  ++ EM   G  P+  T
Sbjct: 996  AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055

Query: 373  YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            Y++L+DA+   G+ E A  +++ M      PN F Y+ +L  +  + E +R  Q+L  M 
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115

Query: 433  SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              G  P+   YN +I    K   +H  +   ++MLS    PD +T+NT+ID   K  R D
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 1175

Query: 493  RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTL 551
             A ELF  +QE G  P   TYN +++ L +  R++  + LL  M R QG  P+++TY T+
Sbjct: 1176 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235

Query: 552  VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
            +D   +S R            D+A   F  M +DGL P ++  + +I++  + +   EA 
Sbjct: 1236 IDGLCKSKRV-----------DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 612  AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             VL+ M +NG  P  +TY TL+    +     K  
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 236/527 (44%), Gaps = 25/527 (4%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A +  S+L+ LC +    D   AV+ + +    C    + Y+ +I+ L +S++L +A  L
Sbjct: 196 AGVHKSILRGLCDAGQCSD---AVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRL 252

Query: 186 SQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            +        P   +YN ++    + + +E AL L+ +M   G   D ++Y+ VI  L +
Sbjct: 253 LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCK 312

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +++D +  ++ K+ +      +   G L++    GF + GD   A+  +      G  P
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVD----GFCRVGDLDGAVELVRKMTERGYRP 368

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  ++           A  V + + ++G  P    Y+ ++ G+ K G L++A  ++
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M R G  PD    S LIDA   A   +SA+ +L+        P+   YS ++      
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
                    L  M  +   PD   YN ++D   K   ++ A   FDRM + G+ PD +T+
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + +I    K    D A ++ E M+E    P   TY+ +IN L +    +    +   M  
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G  PN+VTY TL+D   +  + + A E LE           +MR     P ++    LI
Sbjct: 609 CGCAPNLVTYNTLIDGLCKINKVEQAAEMLE-----------IMRKQSCTPDSITYTCLI 657

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           N      R  EA+ VL+ MK+ G  PD +TY TL++AL + +    V
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 237/551 (43%), Gaps = 71/551 (12%)

Query: 155  KHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDD 208
            ++ LC S  +  ++ILIH L R+  +  A+ LL +  R       + +N +I        
Sbjct: 868  RNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARK 927

Query: 209  LEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
            L+ AL L  +M + G  C  D   YS ++ SL ++ K+D +   +L +++       +  
Sbjct: 928  LDSALELFKEMEESG-SCPPDVFTYSTIVDSLVKSGKVDDAC--RLVEDMVSKGCSPNVV 984

Query: 267  LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
              + ++ G  KAG   +A   L      G SP   TY  +I      GR  EA  + EE+
Sbjct: 985  TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044

Query: 327  KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             + G +P    Y  LL  + K G  +DA  +V  M   G +P+  TY+ L+D +      
Sbjct: 1045 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 1104

Query: 387  ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
            E A  +L  M      PN   Y+ ++AG     +      +L++M S+   PD   +N +
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 1164

Query: 447  IDTFGK-------------------------YNCLHHAMAA---FDR---MLSE-----G 470
            ID   K                         YN L H +     FD+   +L E     G
Sbjct: 1165 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 471  IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
              PD IT+NT+ID   K  R DRA +LF +M   G  P   TY+I+I+ L +    ++  
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 531  RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE--------------------- 569
             +L  M   G  P  +TY TL+D + ++G  D A+E L+                     
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344

Query: 570  ---GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               G   QA      M   GL P  +  N+L+  F +     +A  + + M++ G +PD 
Sbjct: 1345 SKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 627  VTYTTLMKALI 637
             TYTTL+  L+
Sbjct: 1405 ATYTTLVGHLV 1415



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 207/460 (45%), Gaps = 17/460 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+ LIS   R   +  A  L  +M + G       +  +++ L    +   ++L   +
Sbjct: 162 VTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLH--F 219

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+       D    N +I G +K+     A+R L      G +P   +Y  V+     +
Sbjct: 220 REMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKA 278

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R   A  + E++   G  P   +Y  ++ G  K+  + +A  V+ +M + G  P+  TY
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY 338

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             L+D +   G  + A  ++++M     +PN+  Y+ I+  +  R + +R  QVL+ M  
Sbjct: 339 GTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PD   Y+ +I  F K   L  A    ++M+  G  PD    +TLID   K    D 
Sbjct: 399 TGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+EL          P    Y+I+I+ L + +R  + +  L  M      P+VVTY ++VD
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              +S R +DA              F  MR  G+ P  +  + +I++F +D     AF +
Sbjct: 519 GLCKSRRINDAFL-----------LFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           L+ MKE    PDVVTY+ L+  L +   VDK   VF   L
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML 607



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 20/435 (4%)

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            Q+GY+ D    + ++Q+L R  +   +L  ++Y+   C    +       +I G  +AGD
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDAL--QVYRNKLCCSPNM--FTFTILIHGLCRAGD 892

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYN 339
               A   L      G+      +  VI  L ++ +   A  +F+E++ESG   P    Y+
Sbjct: 893  IGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYS 952

Query: 340  ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
             ++   VK G + DA  +V +M   G  P+  TYS L+     AG+ + A  +L+ M  S
Sbjct: 953  TIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 1012

Query: 400  HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
               PN   Y+ I+ G+   G     + +L+EM   G +P+   Y V++D F K      A
Sbjct: 1013 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 1072

Query: 460  MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +   + M+ +G  P+  T+N+L+D   K    +RA +L   M ++G  P   +YN +I  
Sbjct: 1073 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 1132

Query: 520  LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            L +  +  +   LL  M +   +P++VT+ T++D   ++ R D A E            F
Sbjct: 1133 LCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE-----------LF 1181

Query: 580  RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALI- 637
             +++  G  P+ +  NSL++   + +R  +A  +L+ M ++ G  PD++TY T++  L  
Sbjct: 1182 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 1241

Query: 638  --RVDKFHKVFSSYL 650
              RVD+ +K+F   L
Sbjct: 1242 SKRVDRAYKLFLQML 1256



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 198/444 (44%), Gaps = 26/444 (5%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+ +I  L++++++D ++  +L +E+  +    +    N V+ GF KA     A+ 
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAI--RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 286

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   +Y  VI  L    +  EA  V +++ + G +P    Y  L+ G+ 
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G L  A  +V +M   G  P+  TY+ ++  +      E A  VL+ M  +   P++ 
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS I++G+   G+ +    +L++M   G  PD    + +ID   K   +  A       
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMS 466

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +     PD + ++ LI    K  R   AE   + M +   +P   TYN +++ L +  R 
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----------------- 569
            D   L   MRA G++P+VVTY+ ++  + +    D A + LE                 
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586

Query: 570 -------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                  G  D+A + F+ M   G  P+ +  N+LI+   +  +  +A  +L+ M++   
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646

Query: 623 KPDVVTYTTLMKALIRVDKFHKVF 646
            PD +TYT L+  L    +  + +
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAW 670



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 28/378 (7%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T TY+ +I+    +G+ + A  +F+E+   GLK     + ++L+G    G   DA     
Sbjct: 161 TVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFR 220

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM ++   PD  TY+ +I+  + + R + A  +L+EM  +   PN F Y+ +L G+    
Sbjct: 221 EMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKAN 279

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +    +L++M + G  PD   Y  +I+   K + +  A    D+M+  G +P+ IT+ 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+D   + G  D A EL  +M ERGY P   TYN ++++   +   E   ++L  M   
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDA---------------IECLEGLSDQAVNA------ 578
           G  P+ + Y+T++  + ++G+  +A               + CL  L D    A      
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459

Query: 579 ---FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
               R+       P  +A + LI+A  + +R  EA + L  M +N   PDVVTY +++  
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 636 LIRVDKFHKVFSSYLFFN 653
           L    K  ++  ++L F+
Sbjct: 520 LC---KSRRINDAFLLFD 534



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 199/441 (45%), Gaps = 19/441 (4%)

Query: 111 NRVEFKL----AESYRAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL 164
           NRVE  L        R  P  +  + +++  LC  +  +D A  V+  + +   C    +
Sbjct: 279 NRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQ-VDEACRVMDKMIQRG-CQPNVI 336

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y  L+    R   L  A  L ++      R   +TYN ++    R +D+E+A  ++  M
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            Q G   D INYS +I    +  K+  +  LL+++ +         D   L+ +I    K
Sbjct: 397 IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR----GCRPDVACLSTLIDALCK 452

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           A     A   L M+ G+  +P    Y+ +I AL  + R  EAE+  + + ++   P    
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN+++ G  K   + DA  +   M  +GV+PD  TYS++I ++      +SA  +L+ M+
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P+   YS ++ G    G   + F V +EM   G  P+   YN +ID   K N + 
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M  +   PD+IT+  LI+      R + A  +  EM+++G  P   TY  ++
Sbjct: 633 QAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLL 692

Query: 518 NLLGEQERWEDVKRLLGNMRA 538
             L +    E V++LL  M A
Sbjct: 693 RALQKTNNLELVEQLLKEMEA 713



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 229/514 (44%), Gaps = 41/514 (7%)

Query: 143  IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYN 197
            ID AY ++  +     C    + Y++L+ A  +  K  +A  L +    +   P   TYN
Sbjct: 1034 IDEAYHLLEEMVDGG-CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092

Query: 198  ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            +L+    + D++E+A  L+S M Q G   + ++Y+ VI  L +  K+   +L  L +++ 
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL--LLEQML 1150

Query: 258  CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
             +    D    N +I    K      A     + Q  G +P   TY +++  L  S R  
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210

Query: 318  EAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +AE +  E+ ++ G  P    YN ++ G  K   +  A  +  +M   G+ PD+ TYS++
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270

Query: 377  IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
            I +       + A  VL+ M  +   P +  Y  ++ G+   G   +  ++L+ + S G 
Sbjct: 1271 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330

Query: 437  EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             PD   +++ ID   K   L  A    + ML  G+ PDT+T+NTL+         + A +
Sbjct: 1331 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD 1390

Query: 497  LFEEMQERGYFPCTTTYNIMINLLGEQERWED-VKRLLGNMRAQGLLPN----------- 544
            LFE M++ G  P   TY  ++  L +++ ++D +  +  +M   G   N           
Sbjct: 1391 LFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASI 1450

Query: 545  -----VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
                 V     +VD++G+ G   DA +  EG+  + V  +  M               + 
Sbjct: 1451 EVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAM---------------LG 1495

Query: 600  AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             +   +++ +AF + + M   G++PD VT+ +L+
Sbjct: 1496 VYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLL 1529



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/565 (22%), Positives = 223/565 (39%), Gaps = 91/565 (16%)

Query: 151  SWLQK--HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISAC 203
            SWL     N CY   + Y+ ++  L +S ++ +AFLL  R R   + P  +TY+ +I + 
Sbjct: 496  SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555

Query: 204  ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
             ++++L+ A  ++ +M++     D + YS +I  L +   +D +    +++E+       
Sbjct: 556  CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF--DVFQEMLGCGCAP 613

Query: 264  DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
            +    N +I G  K     +A   L + +    +P + TY  +I  L N+ R  EA  V 
Sbjct: 614  NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL 673

Query: 324  EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME-------------------RS 364
             E+K+ G  P    Y  LL+   K   L+  E ++ EME                   R 
Sbjct: 674  REMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733

Query: 365  GVL----------------------------PDEHTYSLLIDAYANAG------------ 384
             VL                            P  H Y   + A A  G            
Sbjct: 734  DVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYR--VTAVATQGGFHHKIVRILNS 791

Query: 385  --RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
               WE A   L+       K  + +  ++L G R+       F         G   DT+ 
Sbjct: 792  RFAWEYAETALERFT---GKLTTTVVGKVLQGVRNGDAALGFFD--WATSQEGYNHDTYT 846

Query: 443  YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
             N ++    +      A+  +   L     P+  T+  LI    + G    A EL +EM 
Sbjct: 847  CNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTAYELLKEMP 904

Query: 503  ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG-LLPNVVTYTTLVDIYGQSGRF 561
              G       +N++I  L    + +    L   M   G   P+V TY+T+VD   +SG+ 
Sbjct: 905  RHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 964

Query: 562  DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            DDA   +E            M + G  P+ +  +SL++   +  +  EA A+LQ M  +G
Sbjct: 965  DDACRLVED-----------MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013

Query: 622  LKPDVVTYTTLMKALIRVDKFHKVF 646
              P++VTY T++    ++ +  + +
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAY 1038



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 214/482 (44%), Gaps = 51/482 (10%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLL-- 185
            +++++  +C +   +D+AY + + +Q+   C    + Y+ L+H L +S +  +A +LL  
Sbjct: 1161 FNTIIDAMCKT-YRVDIAYELFNLIQESG-CTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 1218

Query: 186  -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             +++Q  +P  +TYN +I    ++  +++A  L  +M  DG   D + YS+VI SL +  
Sbjct: 1219 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278

Query: 243  KID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +D  +++L+ + K    +  +        +I GF K G+  KA+  L +    G  P  
Sbjct: 1279 FMDEANNVLELMLK----NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 1334

Query: 301  ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             T++  I  LS  GR  +A  + E +  +GL P T  YN LLKG+      +DA  +   
Sbjct: 1335 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV 1394

Query: 361  MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            M + G  PD  TY+ L+    +    +S + +L E+            S +  G++   E
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDK---KSYKDLLAEVS----------KSMVDTGFKLNHE 1441

Query: 421  WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +   E     VE D      ++D FGK      A   F+ M    +    + W+ 
Sbjct: 1442 LSSKLEASIE-----VEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNV----VLWSA 1492

Query: 481  LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED-VKRLLGNMRAQ 539
            ++  +    + ++A  L+  M   G  P   T+  ++ +       +  V   +   R  
Sbjct: 1493 MLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDY 1552

Query: 540  GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            GL P V  ++ ++D+ G+ G  ++A + + G+                KPS    N L++
Sbjct: 1553 GLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMP--------------CKPSAATWNCLLS 1598

Query: 600  AF 601
            A+
Sbjct: 1599 AY 1600



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 46/283 (16%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKAL 213
           C    + YSILIHAL ++++L EA      ++  R     +TYN+++    ++  +  A 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDV 271
            L  +MR  G   D + YS+VI S  + N +DS+  +L+++ KE +C             
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM-KEAKC------------- 576

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
                                     P   TY+A+I  L  +G   +A  VF+E+   G 
Sbjct: 577 -------------------------VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGC 611

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN L+ G  K+  ++ A  ++  M +    PD  TY+ LI+   NA R E A  
Sbjct: 612 APNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWR 671

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           VL+EM+     P+   Y  +L   +     +   Q+LKEM+++
Sbjct: 672 VLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 45/207 (21%)

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G + +    N L++   K  +Y +A +LF    E  +   T TY+ +I+      +   
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179

Query: 529 VKRLLGNMRAQGLL----------------------------------PNVVTYTTLVDI 554
              L   M  +GL                                   P+ VTY T+++ 
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMING 239

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +S R DDAI  LE + D           +G  P+  + N++++ F +  R   A  +L
Sbjct: 240 LSKSDRLDDAIRLLEEMVD-----------NGFAPNVFSYNTVLHGFCKANRVENALWLL 288

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           + M   G  PDVV+YTT++  L ++D+
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQ 315


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 238/502 (47%), Gaps = 31/502 (6%)

Query: 164 LLYSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ LI+ L +  K+ EA  +LSQ  +  L+P   TY +LI    RN +L+ A  +  +
Sbjct: 241 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 300

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L    ++D +L   + +E+    IE         I      
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEAL--DMLEEMIEKGIEPTVYTYTLPITALCAI 358

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+  +   +  G  P   TY A+I+ LS  G+   A  ++ ++ + GL P T  Y
Sbjct: 359 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 418

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G    A  +   ME  G L +  TY+ +I      G  E A ++ ++M  
Sbjct: 419 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 478

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P    Y+ ++ GY  +G      ++L  MK +G EPD   YN ++  F K+  L  
Sbjct: 479 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 538

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M+  G+ P+ +++ TLID H K G+ D A  L E M+E G  P   +YN +IN
Sbjct: 539 ASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVIN 598

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
            L ++ R+ + +++   M  QGLLPNV+TYTTL+D   ++GR   A +            
Sbjct: 599 GLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 658

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C EG +D+A    + M   GL P  +   SLI+ F    R   AF +L
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
           + M + G KP+  TY+ L+K L
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGL 740



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/585 (23%), Positives = 261/585 (44%), Gaps = 58/585 (9%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVPAPL------WHSLLKNLCSSNSSIDLAYAV 149
           N ++ +AL S  S L ++E  +   ++ +   L      +++L+  LC        A  +
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG-GRFSTALKI 437

Query: 150 VSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-RLTPL----TYNALISACA 204
             W++ H    + +  Y+ +I  L     + +A +L ++  ++ PL    TYN LI+   
Sbjct: 438 FHWMEGHGSLANTQT-YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 496

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
              ++  A  L+  M+++G   D   Y+ ++   ++  K++S+      + +EC  +  +
Sbjct: 497 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY-FQEMVECG-LNPN 554

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                 +I G +K G    A+  L   + +G +P   +Y AVI  LS   R  EAE + +
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ E GL P    Y  L+ G  + G  + A  +  +ME+   LP+ +TYS LI      G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           + + A I+LKEME     P+   ++ ++ G+   G     F +L+ M   G +P+   Y+
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYS 734

Query: 445 VMIDTFGKYNCL---------HHAMAAFD----------------RMLSEGIEPDTITWN 479
           V++    K  CL         H A+ +F                 RM   G EP   T++
Sbjct: 735 VLLKGLQK-ECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYS 793

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+    + GR+  AE+L ++M+ERG+ P    Y  ++    +    +   ++  ++ A+
Sbjct: 794 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT---DGLKPSNLALNS 596
           G   ++  Y  L+    ++G+ ++A    + + ++  NA  ++ T   DGL         
Sbjct: 854 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL--------- 904

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                 E + D     +L  M+     P++ TY  L + L R+ K
Sbjct: 905 ----LKEGELDL-CMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 205/464 (44%), Gaps = 26/464 (5%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I AC   +++ +  + ++++   G+     + + ++  L +   ++ +  + LYK++  
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA--RNLYKQMLN 233

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I+      N +I   +K G   +A   L       LSP   TY ++I     +     
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VF+ + + G  P +  Y+ L+ G    G + +A  ++ EM   G+ P  +TY+L I 
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A       E A  ++  M+    +PN   Y+ +++G    G+ +    +  +M   G+ P
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 413

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +T  YN +I+          A+  F  M   G   +T T+N +I      G  ++A  LF
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E+M + G  P   TYN +IN    +    +  RLL  M+  G  P+  TY  LV  + + 
Sbjct: 474 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 533

Query: 559 GR-------FDDAIEC-----------------LEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           G+       F + +EC                  +G  D A++    M   G  P+  + 
Sbjct: 534 GKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESY 593

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           N++IN   ++ R +EA  +   M E GL P+V+TYTTL+  L R
Sbjct: 594 NAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCR 637



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 14/366 (3%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL    G+G      +   ++  L+       A  +++++  SG++P    +N L+    
Sbjct: 192 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G +++AE ++S++ +  + PD  TY+ LI  +      + A  V   M      PNS 
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS ++ G  + G       +L+EM   G+EP  + Y + I           A+    RM
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G  P+  T+  LI    + G+ + A  L+ +M + G  P T TYN +IN L    R+
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
               ++   M   G L N  TY  ++              CL G  ++A+  F  M   G
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGL-----------CLGGDIEKAMVLFEKMLKMG 480

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P+ +  N+LIN +        A  +L  MKENG +PD  TY  L+       K+ K+ 
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF---SKWGKLE 537

Query: 647 SSYLFF 652
           S+  +F
Sbjct: 538 SASFYF 543



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 20/258 (7%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P   I   ++   R+  E +R    L E+   G     +  N ++    K+  +  A   
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           + +ML+ GI+P  +T+NTLI+   K G+   AE +  ++ +    P   TY  +I  LG 
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI--LGH 285

Query: 523 -QERWEDVK-RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            + R  D+   +   M  +G  PN VTY+TL++     GR D+A++ LE + ++      
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK------ 339

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                G++P+       I A    + + EA  ++  MK+ G +P+V TYT L+  L R+ 
Sbjct: 340 -----GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394

Query: 641 KFHKVFSSYLFFNIYKML 658
           K       Y     +KML
Sbjct: 395 KLEVAIGLY-----HKML 407



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 9/168 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP---LTYNALISACARNDDLEKALNLMSKM 219
           YS L+  L R  + YEA  L +  +     P   + Y+ LI+ C +N +++ AL +   +
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC-KNLEVDHALKIFHSI 850

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+      Y  +I +L +  +++ +  Q L+  +   +   D  +   ++ G  K G
Sbjct: 851 EAKGFQLHLSIYRALICALCKAGQVEEA--QALFDNMLEKEWNADEIVWTVLVDGLLKEG 908

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           +    M+ L + +    +P   TY  +   LS  G++IE+E + ++LK
Sbjct: 909 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 234/488 (47%), Gaps = 18/488 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + ++I+I  L ++ +L EA   F   +++   P   TYN LI+   +   + +A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+ +M++ G   + + YS VI    R  K+D++   KL++++  +    +    N ++ 
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAY--KLFRQMVENGCMPNLVTYNTLLS 239

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G   +A   L   +  GL P   +Y  ++  L  +G+   A  VFE+       P
Sbjct: 240 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 299

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              AY+ L+ G  K G L +A  +  +M  +   PD  T++ L+D      R + A+ VL
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           + ME  +  PN   YS ++ G    G+ +   +V K M   G+EP+   YN +I  F   
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           N +  A+   + M + G  PD IT+NTLID   K GR   A  LF +M+ +   P   TY
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           + +I    + ER +  + L  +M  Q +LP+VVT++TLV+ Y  +G  DDA   LE    
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE--- 536

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M      P      SL++ F +  R  EA  VL+ M + G +P+VVTYT L+
Sbjct: 537 --------MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588

Query: 634 KALIRVDK 641
            A  R  K
Sbjct: 589 DAFCRAGK 596



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 244/525 (46%), Gaps = 20/525 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---Y 180
           VP    +++L N       +  AY ++  +++  L  +  + YS +IH   R  K+   Y
Sbjct: 158 VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNV-VTYSTVIHGFCRQTKVDTAY 216

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           + F         P  +TYN L+S   RN  +++A  L+ +MR+ G   D  +Y  ++  L
Sbjct: 217 KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 276

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +T KID +L  K++++        D    + +I G  KAG   +A +     +     P
Sbjct: 277 CKTGKIDMAL--KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEP 334

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T+ A++  L    R  EA+ V E +++    P    Y++L+ G  K G ++DA+ V 
Sbjct: 335 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 394

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M   G+ P+  TY+ LI  +      +SA ++++EM  +   P+   Y+ ++ G    
Sbjct: 395 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 454

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G      ++  +MK+    PD   Y+ +I  F K   +  A   FD ML + + PD +T+
Sbjct: 455 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 514

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +TL++ +   G  D AE L EEM      P   TY  +++   +  R  + +R+L  M  
Sbjct: 515 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G  PNVVTYT L+D + ++G+   A   LE            M  +G++P+ +   SLI
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE-----------MVGNGVQPNVITYRSLI 623

Query: 599 NAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALIRVDKF 642
             F       EA  +L+ + ++   K D+  Y  +M  L R  + 
Sbjct: 624 GGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 184/414 (44%), Gaps = 78/414 (18%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN--------------- 339
           G++P   TYA VI  L  SG   +A  + EE++ESG  P    YN               
Sbjct: 54  GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113

Query: 340 -----------------ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
                             ++ G  K   L +A    ++M++ G +P+E TY++LI+ +  
Sbjct: 114 LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             +   A ++LKEM+ S   PN   YS ++ G+  + +    +++ ++M  +G  P+   
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI-------------------- 482
           YN ++    +   +  A    D M   G++PD  +++TL+                    
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293

Query: 483 --DCH-------------FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             DC               K GR D A +LFE+M+E    P   T+  +++ L + +R +
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           + +++L  M  +   PNV+TY++L+D   ++G+  DA E            F+ M   G+
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE-----------VFKRMIVRGI 402

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +P+ +  NSLI+ F        A  +++ M   G  PD++TY TL+  L +  +
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 152/342 (44%), Gaps = 27/342 (7%)

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           K+ G       YN L +  ++   + +   ++      G+ P+  TY+++I     +G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  +L+EM  S   P++ IY+ ++       + + T + L   +S   E +   + +M
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHAL---CKARNTAKALDYFRSMECEKNVITWTIM 132

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ID   K N L  A   F +M  +G  P+  T+N LI+   K  +  RA  L +EM+E G 
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY+ +I+    Q + +   +L   M   G +PN+VTY TL+    ++G  D+A E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C  G  D A+  F         P  +A ++LI    
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  R  EA  + + M+EN  +PDVVT+T LM  L + D+  +
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K  G + + + YN + +   +   +             GI P+  T+  +I    K G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D+A EL EEM+E G  P    YN +I+ L    +  +  + L   R+     NV+T+T +
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALC---KARNTAKALDYFRSMECEKNVITWTIM 132

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D   ++ R             +A   F  M+  G  P+    N LIN F +  +   A+
Sbjct: 133 IDGLCKANRLP-----------EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +L+ MKE+GL P+VVTY+T++    R   VD  +K+F
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 46/326 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           ++SL+   C +N  +D A  ++  +     C    + Y+ LI  L   GR+ +    F  
Sbjct: 409 YNSLIHGFCMTNG-VDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGD 466

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + +   P  +TY+ LI    + + ++ A  L   M +     D + +S +++       
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 526

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  ++L +E+       D      ++ GF K G   +A R L      G  P   TY
Sbjct: 527 VDDA--ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 584

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A+I A   +G+   A  + EE+  +G++P    Y +L+ G+   G L++A  ++  +ER
Sbjct: 585 TALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER 644

Query: 364 ------------------------------------SGVLPDEHTYSLLIDAYANAGRWE 387
                                               SG  P    Y  LI          
Sbjct: 645 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 704

Query: 388 SARIVLKEMEVSH-AKPNSFIYSRIL 412
            A  VL+EM +S  ++PN+  Y  ++
Sbjct: 705 KAMEVLEEMTLSRKSRPNAEAYEAVI 730



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 4/204 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY +L+    +   + +A  ++ +M + G   + + Y+ +I +  R  K   ++  +L +
Sbjct: 548 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK--PTVAYRLLE 605

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNS 313
           E+  + ++ +      +I GF   GD  +A + L  + +          Y  ++  L  +
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRT 665

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHT 372
           GR   A  + E +K+SG  PR   Y AL++G  +   L  A  V+ EM  S    P+   
Sbjct: 666 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 725

Query: 373 YSLLIDAYANAGRWESARIVLKEM 396
           Y  +I   A  GR E A  +  E+
Sbjct: 726 YEAVIQELAREGRHEEANALADEL 749


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 205/381 (53%), Gaps = 3/381 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY ALI+A AR   LE+A+ L+ +MR+ G   + + Y++++ +L + + + ++  Q + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA--QDVV 115

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K++       +    N ++ GF K G+   A + LG+    G+ P   TY+A+I  L  S
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            + +EA+ V EE+K SG+ P    Y+AL+ G  K   +++AE ++  M  SG  PD   Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I A+  +G+   A+  L+EM      P+   Y+ ++ G    G+      +L +M+ 
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295

Query: 434 SG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           SG V PD   Y+ +I+   K + L  A    DRM   G  PD +T+ T+ID   KCGR +
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AE L + M+  G  P   TY  +I+ L +  + ++ +R++  MR  G  PN+VTY T+V
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415

Query: 553 DIYGQSGRFDDAIECLEGLSD 573
           +    SGR  +A + ++ + D
Sbjct: 416 NGLCVSGRIKEAQQLVQRMKD 436



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 213/430 (49%), Gaps = 17/430 (3%)

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           DL  AL L+ +M+  G+  D   ++ +I ++     +D ++     + + CD   +    
Sbjct: 5   DLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH--LRSMGCDPNVVTYTA 62

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           L   I  FA+A    +AM+ L   +  G  P   TY  ++ AL        A+ V +++ 
Sbjct: 63  L---IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E G  P    +N+L+ G+ K G + DA  ++  M   G+ P+  TYS LID    + ++ 
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A+ VL+EM+ S   P++F YS ++ G     + +   Q+L+ M  SG  PD   Y+ +I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG-Y 506
             F K   L  A      M  +   PD +T+NT+ID   K G+   A+ + ++MQE G  
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY+ +IN L + +   + ++LL  M   G  P+VVTYTT++D   + GR ++A  
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            L+G           M+  G  P+ +   +LI+   + ++  EA  V++ M+  G  P++
Sbjct: 360 LLQG-----------MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNL 408

Query: 627 VTYTTLMKAL 636
           VTY T++  L
Sbjct: 409 VTYNTMVNGL 418



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 18/380 (4%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I   A AGD   AM  L   + +G  P   TY A+I A + + +  EA  + EE++E G
Sbjct: 31  IITAMANAGDLDGAMDHL---RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 87

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    YN L+    K+  +  A+ VV +M   G  P+  T++ L+D +   G  + AR
Sbjct: 88  CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 147

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L  M     +PN   YS ++ G     ++    +VL+EMK+SGV PD   Y+ +I   
Sbjct: 148 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGL 207

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K + +  A     RM   G  PD + ++++I    K G+   A++  +EM+++   P  
Sbjct: 208 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 267

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQG-LLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            TYN +I+ L +  +  + + +L  M+  G +LP+VVTY+T+++   +S    +A    +
Sbjct: 268 VTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA----Q 323

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            L D+   A       G  P  +   ++I+   +  R  EA  +LQ MK  G  P+VVTY
Sbjct: 324 KLLDRMCKA-------GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY 376

Query: 630 TTLMKALI---RVDKFHKVF 646
           TTL+  L    +VD+  +V 
Sbjct: 377 TTLISGLCKARKVDEAERVM 396



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 177/374 (47%), Gaps = 15/374 (4%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGD   A+  L   +  G +P   T+  +ITA++N+G   + +   + L+  G  P    
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVT 59

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+  + +   L++A  ++ EM   G  P+  TY++L+DA        +A+ V+K+M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN   ++ ++ G+  RG      ++L  M + G+ P+   Y+ +ID   K     
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M + G+ PD  T++ LI    K  + + AE++   M   G  P    Y+ +I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +   +  +  + ++ L  MR Q   P+VVTY T++D   + G+  +A    + + DQ   
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA----QVILDQMQE 295

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           +  V+      P  +  +++IN   +     EA  +L  M + G  PDVVTYTT++  L 
Sbjct: 296 SGDVL------PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349

Query: 638 RVDKFHKVFSSYLF 651
           +  +  +  + YL 
Sbjct: 350 KCGRLEE--AEYLL 361



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 15/331 (4%)

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            N+G    A  + EE+K +G  P    +  ++      G L  A   +  +   G  P+ 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI A+A A + E A  +L+EM      PN   Y+ ++              V+K+
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  P+   +N ++D F K   +  A      M+++G+ P+ +T++ LID   K  +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +  A+E+ EEM+  G  P   TY+ +I+ L + ++ E+ +++L  M   G  P+VV Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++  + +SG+  +A + L+            MR     P  +  N++I+   +  + AEA
Sbjct: 238 IIHAFCKSGKLLEAQKTLQE-----------MRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286

Query: 611 FAVLQYMKENG-LKPDVVTYTTLMKALIRVD 640
             +L  M+E+G + PDVVTY+T++  L + D
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLCKSD 317



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 163/359 (45%), Gaps = 42/359 (11%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             ++++  R   +TY+ALI    ++    +A  ++ +M+  G   D   YS +I  L + 
Sbjct: 151 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKA 210

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +KI+                                  +A + +R +    G G +P   
Sbjct: 211 DKIE----------------------------------EAEQMLRRMA---GSGCTPDVV 233

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y+++I A   SG+ +EA+   +E+++    P    YN ++ G  K+G + +A+ ++ +M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293

Query: 362 ERSG-VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           + SG VLPD  TYS +I+    +     A+ +L  M  +   P+   Y+ I+ G    G 
Sbjct: 294 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +    +L+ MK +G  P+   Y  +I    K   +  A    + M + G  P+ +T+NT
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCT---TTYNIMINLLGEQERWEDVKRLLGNM 536
           +++     GR   A++L + M++ G   C+    TY  ++N L   +  ++ ++LL  M
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKD-GRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 12/276 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           + +L+  LC ++  I+ A  ++  +     C    ++YS +IHA  +S KL EA    Q 
Sbjct: 200 YSALIHGLCKADK-IEEAEQMLRRMAGSG-CTPDVVVYSSIIHAFCKSGKLLEAQKTLQE 257

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQSLTRTN 242
             +QR +P  +TYN +I    +   + +A  ++ +M++ G    D + YS VI  L +++
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +  +  QKL   +       D      +I G  K G   +A   L   +  G +P   T
Sbjct: 318 MLVEA--QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 375

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I+ L  + +  EAE V EE++ +G  P    YN ++ G    G +K+A+ +V  M+
Sbjct: 376 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435

Query: 363 --RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             R+   PD  TY  +++A  ++   + A  +L++M
Sbjct: 436 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 255/547 (46%), Gaps = 53/547 (9%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A +++ L+  LC     ID A  V+  + + + C    + Y+ LI    ++  L EA  L
Sbjct: 127 AAVYNCLIAGLCKMGK-IDAARNVLKMMLERS-CVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            ++ +   LTP  + YNAL++   + + LE+   L+ +M + G   D  +Y+ V+  L  
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
           + K + +  +L+K+ ++    K   D    N ++ GF K     +A R L    G   +P
Sbjct: 245 SGKYEEAGKILEKMIEK----KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I   S + R  +A  V E++ ++G+ P    YN LL G  K G L++A  ++
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M      PD  TYS+L++     G+ + AR++L+ M     +PN   ++ ++ G+   
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA----------------- 461
           G+     +VL+ MK     PD   Y+ +ID + K N +  A A                 
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEG 480

Query: 462 ------------AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                         D M  +G  P +  +  +I       R D A ++ + M ERG  P 
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY+I+IN L + +R ED   +L  M  +G +P+V TYT+L+D + +  + D A +C  
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQC-- 598

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    F+ MR  G +P  LA N LI+ F +     +A  V+Q M E G  PD  TY
Sbjct: 599 ---------FKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649

Query: 630 TTLMKAL 636
            +LM++L
Sbjct: 650 FSLMRSL 656



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 221/459 (48%), Gaps = 25/459 (5%)

Query: 189 QRLTP--LTYNALISACARNDDLEKAL-NLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +R +P  +T+N ++ A  +  DL++AL +   KM           Y ++I  L +  +ID
Sbjct: 53  RRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCSPTA---FTYCILIHGLCQCQRID 109

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +   +L  E+       D  + N +I G  K G    A   L M       P   TY +
Sbjct: 110 EAY--QLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I     +    EA  + E++KESGL P T AYNALL G  K   L++   ++ EM  +G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PD  +Y+ ++     +G++E A  +L++M      P+   Y+ ++ G+    +     
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L++M      P    Y  +I  F + + L  A    + M   GI PD +T+N L+D  
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ + A EL E M E+   P   TY+I++N L +  + +D + LL  M  +G  PN+
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VT+ T++D + ++G+ D+  + LE           +M+     P  +  ++LI+ + +  
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLE-----------LMKEVSCTPDVVTYSTLIDGYCKAN 456

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           R  +AFA+L      G+ PD  +Y+++++ L    K  +
Sbjct: 457 RMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEE 489



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/558 (24%), Positives = 254/558 (45%), Gaps = 42/558 (7%)

Query: 122 RAVPAPLWH-SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           R  P  + H ++LK  C      DL  A+ S  +    C      Y ILIH L + +++ 
Sbjct: 54  RFSPDVITHNTILKAYCQIG---DLDRAL-SHFRGKMWCSPTAFTYCILIHGLCQCQRID 109

Query: 181 EAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           EA+     ++ +        YN LI+   +   ++ A N++  M +     D I Y+ +I
Sbjct: 110 EAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLI 169

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
               +TN +D +  +KL ++++   +  D    N ++ G  K     +  + L      G
Sbjct: 170 VGCCQTNALDEA--RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P T +Y  V+  L  SG+  EA  + E++ E    P    YN+L+ G+ K+  + +AE
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++ +M      P   TY+ LI  ++ A R   A  V+++M  +   P+   Y+ +L G 
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+ +   ++L+ M      PD   Y+++++   K   +  A    + ML  G +P+ 
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +T+NT+ID   K G+ D   ++ E M+E    P   TY+ +I+   +  R +D   +LG 
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG- 466

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------GLSD--- 573
                + P+  +Y+++++    +G+ ++A E ++                   GL D   
Sbjct: 467 -----ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521

Query: 574 --QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +A+   +VM   G +P+    + LIN   + +R  +A  VL  M E G  PDV TYT+
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+    +++K    +  +
Sbjct: 582 LIDGFCKINKMDAAYQCF 599



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 27/475 (5%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           +  LLN L + +  E  S L            ++ E+ R      +++++  LC S    
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLE----------EMVEAGREPDTFSYNTVVACLCESGKYE 249

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNA 198
           +    +   ++K   C    + Y+ L+    +  K+ EA      ++ +R   T +TY  
Sbjct: 250 EAGKILEKMIEKK--CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIE 257
           LI   +R D L  A  +M  M + G   D + Y+ ++  L +  K++ +  L ++  E +
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           C     D    + ++ G  K G    A   L M    G  P   T+  +I     +G+  
Sbjct: 368 CAP---DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E   V E +KE    P    Y+ L+ GY K   ++DA  ++      G+ PD+ +YS ++
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSML 478

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +   + G+ E A+ V+  M      P S  Y+ I+ G  D        ++L+ M   G E
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+ + Y+++I+   K   +  A+   D ML +G  PD  T+ +LID   K  + D A + 
Sbjct: 539 PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQC 598

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           F+ M++ G  P    YNI+I+   +    E    ++  M  +G  P+  TY +L+
Sbjct: 599 FKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 209/463 (45%), Gaps = 29/463 (6%)

Query: 59  SKQNDTEEEEEDDDDVLSLQKQ--RYDFTPLLNFLSENSNSESASALASSPSSLNRVEFK 116
            KQN  EE  +  ++++   ++   + +  ++  L E+   E A           ++  K
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA----------GKILEK 257

Query: 117 LAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           + E         ++SL+   C   S +D A  ++  +     C    + Y+ LI    R+
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKV-SKMDEAERLLEDMVGRR-CAPTVITYTTLIGGFSRA 315

Query: 177 EKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           ++L +A+ + +   +  ++P  +TYN L+    +   LE+A  L+  M +     D + Y
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375

Query: 232 SLVIQSLTRTNKIDSS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           S+++  L +  K+D + LL ++  E  C   + +    N +I GF KAG   +  + L +
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGC---QPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            + V  +P   TY+ +I     + R  +A A+       G+ P   +Y+++L+G    G 
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A+ V+  M + G  P    Y+L+I    +  R + A  +L+ M     +PN + YS 
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G       +    VL  M   G  PD   Y  +ID F K N +  A   F  M   G
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
            EPD + +N LI    + G  ++A E+ + M E+G  P   TY
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 152/360 (42%), Gaps = 38/360 (10%)

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R +E  + F E      KP    Y AL+ G+ + G  K    + +EM      PD  T++
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 375 LLIDAYANAGRWESARIVLKEMEVSH------AKPNSFIYSRILAGYRDRGEWQRTFQVL 428
            ++ AY   G  + A        +SH        P +F Y  ++ G          +Q+L
Sbjct: 64  TILKAYCQIGDLDRA--------LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLL 115

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM      PD   YN +I    K   +  A      ML     PD IT+ +LI    + 
Sbjct: 116 DEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT 175

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              D A +L E+M+E G  P T  YN ++N L +Q + E+V +LL  M   G  P+  +Y
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235

Query: 549 TTLVDIYGQSGRFDDAIECLEGL------------------------SDQAVNAFRVMRT 584
            T+V    +SG++++A + LE +                         D+A      M  
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVG 295

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               P+ +   +LI  F    R A+A+ V++ M + G+ PD+VTY  L+  L +  K  +
Sbjct: 296 RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEE 355



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 9/189 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----L 184
           + S+L+ LCS+   ++ A  V+  + K   C      Y+++I  L   E+  EA     +
Sbjct: 474 YSSMLEGLCSTGK-VEEAQEVMDLMTKQG-CPPTSSHYALIIGGLCDVERGDEALKMLQV 531

Query: 185 LSQRQRLTPL-TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +S+R     L TY+ LI+   +   +E A+N++  M + G   D   Y+ +I    + NK
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D++   + +K +     E D    N +I GF ++G+  KA+  + +    G +P  ATY
Sbjct: 592 MDAAY--QCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649

Query: 304 AAVITALSN 312
            +++ +L+ 
Sbjct: 650 FSLMRSLTT 658


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 234/488 (47%), Gaps = 18/488 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + ++I+I  L ++ +L EA   F   +++   P   TYN LI+   +   + +A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+ +M++ G   + + YS VI    R  K+D++   KL++++  +    +    N ++ 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAY--KLFRQMVENGCMPNLVTYNTLLS 120

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G   +A   L   +  GL P   +Y  ++  L  +G+   A  VFE+       P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              AY+ L+ G  K G L +A  +  +M  +   PD  T++ L+D      R + A+ VL
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           + ME  +  PN   YS ++ G    G+ +   +V K M   G+EP+   YN +I  F   
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           N +  A+   + M + G  PD IT+NTLID   K GR   A  LF +M+ +   P   TY
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           + +I    + ER +  + L  +M  Q +LP+VVT++TLV+ Y  +G  DDA   LE    
Sbjct: 361 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE--- 417

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M      P      SL++ F +  R  EA  VL+ M + G +P+VVTYT L+
Sbjct: 418 --------MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469

Query: 634 KALIRVDK 641
            A  R  K
Sbjct: 470 DAFCRAGK 477



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 244/525 (46%), Gaps = 20/525 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---Y 180
           VP    +++L N       +  AY ++  +++  L  +  + YS +IH   R  K+   Y
Sbjct: 39  VPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNV-VTYSTVIHGFCRQTKVDTAY 97

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           + F         P  +TYN L+S   RN  +++A  L+ +MR+ G   D  +Y  ++  L
Sbjct: 98  KLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +T KID +L  K++++        D    + +I G  K G   +A +     +     P
Sbjct: 158 CKTGKIDMAL--KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEP 215

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T+ A++  L    R  EA+ V E +++    P    Y++L+ G  K G ++DA+ V 
Sbjct: 216 DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVF 275

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M   G+ P+  TY+ LI  +      +SA ++++EM  +   P+   Y+ ++ G    
Sbjct: 276 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 335

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G      ++  +MK+    PD   Y+ +I  F K   +  A   FD ML + + PD +T+
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +TL++ +   G  D AE L EEM      P   TY  +++   +  R  + +R+L  M  
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G  PNVVTYT L+D + ++G+   A + LE            M  +G++P+ +   SLI
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE-----------MVGNGVQPNVITYRSLI 504

Query: 599 NAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALIRVDKF 642
             F       EA  +L+ + ++   K D+  Y  +M  L R  + 
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRM 549



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 11/215 (5%)

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +MK  G  P+   YNV+I+ F K + +H A      M   G+ P+ +T++T+I    +  
Sbjct: 32  KMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQT 91

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D A +LF +M E G  P   TYN +++ L      ++   LL  MR +GL P+  +Y 
Sbjct: 92  KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYD 151

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+    ++G+ D A++  E  S+               P  +A ++LI    +  R  E
Sbjct: 152 TLMAGLCKTGKIDMALKVFEDNSNGDC-----------PPDVVAYSTLIAGLCKTGRLDE 200

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           A  + + M+EN  +PDVVT+T LM  L + D+  +
Sbjct: 201 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 235



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 46/326 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           ++SL+   C +N  +D A  ++  +     C    + Y+ LI  L   GR+ +    F  
Sbjct: 290 YNSLIHGFCMTNG-VDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGD 347

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + +   P  +TY+ LI    + + ++ A  L   M +     D + +S +++       
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  ++L +E+       D      ++ GF K G   +A R L      G  P   TY
Sbjct: 408 VDDA--ERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A+I A   +G+   A  + EE+  +G++P    Y +L+ G+   G L++A  ++  +ER
Sbjct: 466 TALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525

Query: 364 ------------------------------------SGVLPDEHTYSLLIDAYANAGRWE 387
                                               SG  P    Y  LI          
Sbjct: 526 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 585

Query: 388 SARIVLKEMEVSH-AKPNSFIYSRIL 412
            A  VL+EM +S  ++PN+  Y  ++
Sbjct: 586 KAMEVLEEMTLSRKSRPNAEAYEAVI 611



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 4/204 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY +L+    +   + +A  ++ +M + G   + + Y+ +I +  R  K   ++  KL +
Sbjct: 429 TYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK--PTVAYKLLE 486

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNS 313
           E+  + ++ +      +I GF   GD  +A + L  + +          Y  ++  L  +
Sbjct: 487 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRT 546

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHT 372
           GR   A  + E +K+SG  PR   Y AL++G  +   L  A  V+ EM  S    P+   
Sbjct: 547 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 606

Query: 373 YSLLIDAYANAGRWESARIVLKEM 396
           Y  +I   A  GR E A  +  E+
Sbjct: 607 YEAVIQELAREGRHEEANALADEL 630



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 14/106 (13%)

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV+T+T ++D   ++ R             +A   F  M+  G  P+    N LIN F +
Sbjct: 6   NVITWTIMIDGLCKANRLP-----------EATTYFAKMKKKGTVPNEWTYNVLINGFCK 54

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             +   A+ +L+ MKE+GL P+VVTY+T++    R   VD  +K+F
Sbjct: 55  VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 100


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 232/480 (48%), Gaps = 20/480 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ +I+ L +  ++ EA L+     R    P   TY +LI    RN +L+ A  +  +
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +DG   + + YS +I  L    +++ ++   + +E+    IE         +V    A
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAM--DMLEEMVQKGIEPTVYTYTIPLVSLCDA 320

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G +S+A+  LG  +  G  P   T+ A+I+ LS  G+   A  ++ ++   GL P T  Y
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G  + A  +   M   G LP   TY+ +I  +   G  + A ++  +M  
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           + + PN   Y+ ++ GY  +G      ++L+ MK +G++PD   Y  +I  F +   L H
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F  M+  GI P+ +T+  +ID +F   + D A  LF +M E G  P + TYN+MI+
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +     + +   G M  QGLLPNV+TYT+ +D   ++GR           +  A   
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR-----------TGLAFKI 609

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQR--DAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           F  M      P+    +SLI    ++ R  DAE + +L  +   G +P+V TYTTL+K L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 245/551 (44%), Gaps = 38/551 (6%)

Query: 121 YRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           Y A P A  + SL+   C  N ++DLA+A+   + K   C    + YS LI+ L    +L
Sbjct: 231 YDAYPNAFTYTSLILGHCR-NHNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGRL 288

Query: 180 YEAFLLSQ---RQRLTPLTYN---ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            EA  + +   ++ + P  Y     L+S C      E A+ L+ KM++ G   +   ++ 
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE-AVELLGKMKKRGCVPNIQTFTA 347

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I  L+R  K + ++   LY ++  D +       N +I      G    A         
Sbjct: 348 LISGLSRDGKFEIAI--GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P T TY  +I      G   +A  +F+++ ++G  P    YN L+ GY K G L +
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++  M+ +G+ PD  TY+ LI  ++  G+ E A  +   M      PN   Y+ I+ 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY +  +      +  +M  SG  P +  YNVMI  F K N +  A     +M+ +G+ P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK--R 531
           + IT+ + ID   + GR   A ++F EM++R YFP   TY+ +I  L ++ R ED +   
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI------------------------EC 567
           LL  +   G  PNV TYTTLV      GR  +A                         EC
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                + A+N F  M T G +       +LI A  ++    EA  + Q M E     D V
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 628 TYTTLMKALIR 638
            +T L+  L++
Sbjct: 766 VWTVLLDGLLK 776



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 204/471 (43%), Gaps = 20/471 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  ++  L+    + D ++ A ++  KM   G     + ++ +I  L +  ++  + L  
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKL-- 223

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +   I       +      +I+G  +  +   A          G  P + TY+ +I  L 
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           + GR  EA  + EE+ + G++P    Y   L      G   +A  ++ +M++ G +P+  
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T++ LI   +  G++E A  +  +M      P +  Y+ ++      G ++  F + K M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G  P T  YN +I  F     +  AM  FD+ML  G  P+ IT+NTLI  + K G  
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A  L E M+  G  P   TY  +I+      + E    L   M   G+ PN VTYT +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D Y    + DDA+             F  M   G  PS+   N +I+ F +    +EA 
Sbjct: 524 IDGYFNLAKVDDALA-----------LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
                M + GL P+V+TYT+ +  L R  +       FH++     F N+Y
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 12/366 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI+   +   L  A  L +  +   L P   TY  LIS  +R   LE A +L   
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   + + Y+ +I       K+D +L    +K +E   +    Q  N +I GF+K 
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDAL-ALFWKMVESGNLP-SSQTYNVMISGFSKT 565

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              S+A  F G     GL P   TY + I  L  +GRT  A  +F E+++    P    Y
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 339 NALLKGYVKMGYLKDAEF--VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           ++L+ G  + G  +DAE   +++ +   G  P+  TY+ L+      GR   A  ++  M
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM 685

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +    +P+  IY  +L G     + +    +   M + G +     Y  +I    K N +
Sbjct: 686 QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   F  ML +    D + W  L+D   K G  D   +L   M+ R    CT  +   
Sbjct: 746 EEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRN---CTLNFQTY 802

Query: 517 INLLGE 522
           + L  E
Sbjct: 803 VMLARE 808



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 4/263 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN +IS  ++ + + +A N   KM + G   + I Y+  I  L R  +  + L  K++ 
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR--TGLAFKIFH 611

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRF--LGMAQGVGLSPKTATYAAVITALSN 312
           E+E      +    + +I G  + G A  A  +  L      G  P   TY  ++  L  
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR  EA+ +   +++ GL+P  + Y ALL G  K   ++ A  +   M+  G       
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y  LI A       E A+ + + M   H   +  +++ +L G    GE     ++L  M+
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVME 791

Query: 433 SSGVEPDTHFYNVMIDTFGKYNC 455
           S     +   Y ++       +C
Sbjct: 792 SRNCTLNFQTYVMLARELSALDC 814


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 232/480 (48%), Gaps = 20/480 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ +I+ L +  ++ EA L+     R    P   TY +LI    RN +L+ A  +  +
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +DG   + + YS +I  L    +++ ++   + +E+    IE         +V    A
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAM--DMLEEMVQKGIEPTVYTYTIPLVSLCDA 320

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G +S+A+  LG  +  G  P   T+ A+I+ LS  G+   A  ++ ++   GL P T  Y
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G  + A  +   M   G LP   TY+ +I  +   G  + A ++  +M  
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           + + PN   Y+ ++ GY  +G      ++L+ MK +G++PD   Y  +I  F +   L H
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F  M+  GI P+ +T+  +ID +F   + D A  LF +M E G  P + TYN+MI+
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +     + +   G M  QGLLPNV+TYT+ +D   ++GR           +  A   
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR-----------TGLAFKI 609

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQR--DAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           F  M      P+    +SLI    ++ R  DAE + +L  +   G +P+V TYTTL+K L
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 245/551 (44%), Gaps = 38/551 (6%)

Query: 121 YRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           Y A P A  + SL+   C  N ++DLA+A+   + K   C    + YS LI+ L    +L
Sbjct: 231 YDAYPNAFTYTSLILGHCR-NHNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGRL 288

Query: 180 YEAFLLSQ---RQRLTPLTYN---ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            EA  + +   ++ + P  Y     L+S C      E A+ L+ KM++ G   +   ++ 
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE-AVELLGKMKKRGCVPNIQTFTA 347

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I  L+R  K + ++   LY ++  D +       N +I      G    A         
Sbjct: 348 LISGLSRDGKFEIAI--GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P T TY  +I      G   +A  +F+++ ++G  P    YN L+ GY K G L +
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++  M+ +G+ PD  TY+ LI  ++  G+ E A  +   M      PN   Y+ I+ 
Sbjct: 466 AMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIID 525

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY +  +      +  +M  SG  P +  YNVMI  F K N +  A     +M+ +G+ P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK--R 531
           + IT+ + ID   + GR   A ++F EM++R YFP   TY+ +I  L ++ R ED +   
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI------------------------EC 567
           LL  +   G  PNV TYTTLV      GR  +A                         EC
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                + A+N F  M T G +       +LI A  ++    EA  + Q M E     D V
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 628 TYTTLMKALIR 638
            +T L+  L++
Sbjct: 766 AWTVLLDGLLK 776



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 204/471 (43%), Gaps = 20/471 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  ++  L+    + D ++ A ++  KM   G     + ++ +I  L +  ++  + L  
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKL-- 223

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +   I       +      +I+G  +  +   A          G  P + TY+ +I  L 
Sbjct: 224 IMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLC 283

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           + GR  EA  + EE+ + G++P    Y   L      G   +A  ++ +M++ G +P+  
Sbjct: 284 SEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T++ LI   +  G++E A  +  +M      P +  Y+ ++      G ++  F + K M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G  P T  YN +I  F     +  AM  FD+ML  G  P+ IT+NTLI  + K G  
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A  L E M+  G  P   TY  +I+      + E    L   M   G+ PN VTYT +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D Y    + DDA+             F  M   G  PS+   N +I+ F +    +EA 
Sbjct: 524 IDGYFNLAKVDDALA-----------LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
                M + GL P+V+TYT+ +  L R  +       FH++     F N+Y
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 155/366 (42%), Gaps = 12/366 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI+   +   L  A  L +  +   L P   TY  LIS  +R   LE A +L   
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   + + Y+ +I       K+D +L    +K +E   +    Q  N +I GF+K 
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDAL-ALFWKMVESGNLP-SSQTYNVMISGFSKT 565

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              S+A  F G     GL P   TY + I  L  +GRT  A  +F E+++    P    Y
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625

Query: 339 NALLKGYVKMGYLKDAEF--VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           ++L+ G  + G  +DAE   +++ +   G  P+  TY+ L+      GR   A  ++  M
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSM 685

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +    +P+  IY  +L G     + +    +   M + G +     Y  +I    K N +
Sbjct: 686 QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFI 745

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   F  ML +    D + W  L+D   K G  D   +L   M+ R    CT  +   
Sbjct: 746 EEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRN---CTLNFQTY 802

Query: 517 INLLGE 522
           + L  E
Sbjct: 803 VMLARE 808



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 4/263 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN +IS  ++ + + +A N   KM + G   + I Y+  I  L R  +  + L  K++ 
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR--TGLAFKIFH 611

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRF--LGMAQGVGLSPKTATYAAVITALSN 312
           E+E      +    + +I G  + G A  A  +  L      G  P   TY  ++  L  
Sbjct: 612 EMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCG 671

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR  EA+ +   +++ GL+P  + Y ALL G  K   ++ A  +   M+  G       
Sbjct: 672 EGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSD 731

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y  LI A       E A+ + + M   H   +   ++ +L G    GE     ++L  M+
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVME 791

Query: 433 SSGVEPDTHFYNVMIDTFGKYNC 455
           S     +   Y ++       +C
Sbjct: 792 SRNCTLNFQTYVMLARELSALDC 814


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 261/597 (43%), Gaps = 49/597 (8%)

Query: 101 SALASSPSSLNRVEFKLAESYRAVPAPLW-------HSLLKNLCSSNSSIDLAYAVVSWL 153
           S L      L R+E   A ++  +    W       + LL  LC +   +D A  ++   
Sbjct: 94  SILTGCFCRLGRIEHGFA-AFGLILKTGWRVNEVVINQLLNGLCDA-KRVDEAMDILLRR 151

Query: 154 QKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ------RLTP--LTYNALISACAR 205
                C    +  + L+  L   +++ EA  L            TP  +TYN +I    +
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIEL 263
              +++A  ++  M   G   D + YS +I  L +   +D +  +LQ +  +     ++ 
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK----GVKP 267

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G  KA    +A   L      G+ P   TY  +I  L  +     A+ V 
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + + +  +KP  + YN L+ GY+  G  K+    + EM   G+ PD  TYSLL+D     
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G+   AR +   M     KPN  IY  +L GY  RG       +L  M ++G+ P+ + +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N+++  + K   +  AM  F RM   G+ PD +T+  LID   K GR D A   F +M  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG---- 559
            G  P +  +N ++  L   +RWE  + L   M  QG+ PNVV + T++      G    
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 560 --RFDDAIE------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
             R  D++E                  CL G +D+A     VM + GLKP  ++ ++L+ 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
            + +  R   A+ + + M   G+ P  VTY+T+++ L    +F +  +  L+ N+ K
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE--AKELYLNMIK 682



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 142/617 (23%), Positives = 248/617 (40%), Gaps = 145/617 (23%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----F 183
           +++++  LC +  ++D A  V+  +    +     + YS +I  L +++ +  A      
Sbjct: 202 YNTIIDGLCKA-QAVDRAEGVLQHMIDKGVKLDV-VTYSTIIDGLCKAQAVDRAEGVLQH 259

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ +  +   +TYN +I    +   +++A  ++  M   G   D + Y+ +I  L +   
Sbjct: 260 MIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +D +  +LQ +  +     ++ D Q  N +I G+   G+  + +R L      GL P   
Sbjct: 320 VDRADGVLQHMIDK----DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVV 375

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD-------- 353
           TY+ ++  L  +G+  EA  +F  +   G+KP    Y  LL GY   G + D        
Sbjct: 376 TYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLM 435

Query: 354 ---------------------------AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
                                      A  + S M + G+ PD  TY +LIDA    GR 
Sbjct: 436 VANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRV 495

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV- 445
           + A +   +M      PNS +++ ++ G      W++  ++  EM   GV P+  F+N  
Sbjct: 496 DDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI 555

Query: 446 ---------------MIDTFGK---------YNCL--HHAMAA--------FDRMLSEGI 471
                          +ID+  +         YN L   H +A          D M+S G+
Sbjct: 556 MCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGL 615

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD I+++TL+  + K GR D A  LF EM  +G  P   TY+ ++  L    R+ + K 
Sbjct: 616 KPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKE 675

Query: 532 LLGNMRAQG-----------------------------------LLPNVVTYTTLVDIYG 556
           L  NM   G                                   L PN++T+T ++D+  
Sbjct: 676 LYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLF 735

Query: 557 QSGRFDDAIE-----------------CL-------EGLSDQAVNAFRVMRTDGLKPSNL 592
           + GR  DA++                 C+       EGL D+  N F  M   G  P ++
Sbjct: 736 KGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSV 795

Query: 593 ALNSLINAF---GEDQR 606
            LN++I +    GE  R
Sbjct: 796 MLNAIIRSLLGRGEIMR 812



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 152/369 (41%), Gaps = 56/369 (15%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER------SGVLPDEH 371
           +A  +F+EL         +A+N LL    +      +E  VS   R      + V PD  
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLC 91

Query: 372 TYSLLIDAYANAGR---------------W---------------------ESARIVLKE 395
           TYS+L   +   GR               W                     E+  I+L+ 
Sbjct: 92  TYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRR 151

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG---VEPDTHFYNVMIDTFGK 452
           M      PN    + +L G  +    +   ++L  M   G     P+   YN +ID   K
Sbjct: 152 MPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCK 211

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A      M+ +G++ D +T++T+ID   K    DRAE + + M ++G  P   T
Sbjct: 212 AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVT 271

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN +I+ L + +  +  + +L +M  +G+ P+VVTY T++D   ++   D A   L+ + 
Sbjct: 272 YNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMI 331

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+ V           KP     N LI+ +       E    L+ M   GL PDVVTY+ L
Sbjct: 332 DKDV-----------KPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLL 380

Query: 633 MKALIRVDK 641
           +  L +  K
Sbjct: 381 LDYLCKNGK 389



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/400 (21%), Positives = 169/400 (42%), Gaps = 8/400 (2%)

Query: 138 SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP- 193
           +  + ID A  + S + +H L     + Y ILI AL +  ++ +A L   +     +TP 
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDV-VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            + +N+L+      D  EKA  L  +M   G   + + ++ ++ +L    ++   + Q+L
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV--MVAQRL 571

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
              +E   +  +    N +I G   AG   +A + L +   VGL P   +Y  ++     
Sbjct: 572 IDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCK 631

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR   A  +F E+   G+ P    Y+ +L+G        +A+ +   M +SG   D +T
Sbjct: 632 TGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYT 691

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+++++        + A  + + +     +PN   ++ ++      G  +    +   + 
Sbjct: 692 YNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIP 751

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G+ P+   Y +M+    +   L      F  M   G  PD++  N +I      G   
Sbjct: 752 SHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIM 811

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           RA     ++ E  +    +T +++I+L   +E     K L
Sbjct: 812 RAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 237/501 (47%), Gaps = 32/501 (6%)

Query: 168 ILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           IL+  LGR      + KL +   L Q   L    Y  ++ A +R    EKA+NL  +M++
Sbjct: 187 ILVRILGRESQYSVAAKLLDKIPL-QDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKE 245

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     + Y++++    +  +    +L  L +E+    ++ D    + V+   A+ G  
Sbjct: 246 MGPSPTLVTYNVILDVFGKMGRSWRKILGVL-EEMRSKGLKFDEFTCSTVLSACAREGLL 304

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A  F    +  G  P T TY A++     +G   EA +V +E++E+     +  YN L
Sbjct: 305 REAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNEL 364

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y + G+ K+A  V+  M + GV+P+  TY+ +IDAY  AG+ + A  +   M+ +  
Sbjct: 365 VAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 424

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN+  Y+ +L+    +       ++L +MKS+G  P+   +N ++   G          
Sbjct: 425 VPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNR 484

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M S G EPD  T+NTLI  + +CG    A +++ EM   G+  C TTYN ++N L 
Sbjct: 485 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 544

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----- 576
            +  W   + ++ +M+++G  P   +Y+ ++  Y + G +       EG+++  +     
Sbjct: 545 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWM 604

Query: 577 -------------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                               AF + +  G KP  +  NS+++ F  +    +A  +LQ +
Sbjct: 605 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSI 664

Query: 618 KENGLKPDVVTYTTLMKALIR 638
            E+GL PD+VTY +LM   +R
Sbjct: 665 HEDGLNPDLVTYNSLMDMYVR 685



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 224/510 (43%), Gaps = 56/510 (10%)

Query: 166 YSILIHALGRSEKLYEAFL------LSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y++++   G+  + +   L       S+  +    T + ++SACAR   L +A +  +++
Sbjct: 255 YNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAEL 314

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  GY    + Y+ ++Q   +      +L   + KE+E +    D    N+++  +A+AG
Sbjct: 315 KSCGYEPGTVTYNALLQVFGKAGVYTEAL--SVLKEMEENNCPADSVTYNELVAAYARAG 372

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
            + +A   + M    G+ P   TY  VI A   +G+  EA  +F  +KE+G  P T  YN
Sbjct: 373 FSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 432

Query: 340 ALL---------KGYVKM--------------------------GYLKDAEFVVSEMERS 364
           A+L            +KM                          G  K    V  EM+  
Sbjct: 433 AVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSC 492

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD  T++ LI AY   G    A  +  EM  +        Y+ +L     +G+W+  
Sbjct: 493 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 552

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNTLID 483
             V+ +MKS G +P    Y++M+  + K    +  +   +  ++EG I P  +   TL+ 
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGN-YLGIERIEEGINEGQIFPSWMLLRTLLL 611

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            +FKC     +E  F   ++ GY P    +N M+++      ++  + +L ++   GL P
Sbjct: 612 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNP 671

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTY +L+D+Y + G      EC      +A    + +    LKP  ++ N++I  F  
Sbjct: 672 DLVTYNSLMDMYVRRG------ECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCR 720

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                EA  +L  M E G++P + TY T +
Sbjct: 721 KGLMQEAVRMLSEMTERGIRPCIFTYNTFV 750



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/499 (23%), Positives = 207/499 (41%), Gaps = 65/499 (13%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA   L    +   P   +TYN L++A AR    ++A  ++  M 
Sbjct: 326 YNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMT 385

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + I Y+ VI +  +  K D +L  KL+  ++      +    N V+    K   
Sbjct: 386 QKGVMPNAITYTTVIDAYGKAGKEDEAL--KLFYSMKEAGCVPNTCTYNAVLSMLGKKSR 443

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +++ ++ L   +  G  P  AT+  ++    N G       VF E+K  G +P    +N 
Sbjct: 444 SNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 503

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   DA  +  EM R+G      TY+ L++A A  G W S   V+ +M+   
Sbjct: 504 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 563

Query: 401 AKPNSFIYSRILAGYRDRGEW--------------------------------------Q 422
            KP    YS +L  Y   G +                                      +
Sbjct: 564 FKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSE 623

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           R F + K+    G +PD   +N M+  F + N    A      +  +G+ PD +T+N+L+
Sbjct: 624 RAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLM 680

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D + + G   +AEE+ + +++    P   +YN +I     +   ++  R+L  M  +G+ 
Sbjct: 681 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIR 740

Query: 543 PNVVTYTTLVDIY---GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           P + TY T V  Y   G  G  +D IEC              M  +  +P+ L    +++
Sbjct: 741 PCIFTYNTFVSGYTAMGMYGEIEDVIEC--------------MAKNDCRPNELTFKMVVD 786

Query: 600 AFGEDQRDAEAFAVLQYMK 618
            +    + +EA   +  +K
Sbjct: 787 GYCRAGKYSEAMDFVSKIK 805



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYNAL++A AR  D     N++S M+  G+     +YSL++Q   +        ++++ +
Sbjct: 535 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG--IERIEE 592

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I   +I     LL  +++   K                               AL+ S 
Sbjct: 593 GINEGQIFPSWMLLRTLLLANFKC-----------------------------RALAGS- 622

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                E  F   K+ G KP    +N++L  + +      AE ++  +   G+ PD  TY+
Sbjct: 623 -----ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYN 677

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+D Y   G    A  +LK +E S  KP+   Y+ ++ G+  +G  Q   ++L EM   
Sbjct: 678 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTER 737

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P    YN  +  +             + M      P+ +T+  ++D + + G+Y  A
Sbjct: 738 GIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 797

Query: 495 EELFEEMQERGYFPC 509
            +   ++  + + PC
Sbjct: 798 MDFVSKI--KTFDPC 810



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 95/241 (39%), Gaps = 49/241 (20%)

Query: 411 ILAGYRDRGEWQRT---FQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++ G  D G W+R    F+ L    +SG ++ D H   +++   G+ +    A    D++
Sbjct: 149 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKI 208

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +    D   + T++  + + G+Y++A  LFE M+E                       
Sbjct: 209 PLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKE----------------------- 245

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
                        G  P +VTY  ++D++G+ GR    I          +     MR+ G
Sbjct: 246 ------------MGPSPTLVTYNVILDVFGKMGRSWRKI----------LGVLEEMRSKG 283

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           LK      +++++A   +    EA      +K  G +P  VTY  L++   +   + +  
Sbjct: 284 LKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 343

Query: 647 S 647
           S
Sbjct: 344 S 344


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 216/470 (45%), Gaps = 43/470 (9%)

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL------- 267
           L+ +M + G   + ++Y+ +++     N+ + +L        E   +  DGQ+       
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEAL--------ELLHMMADGQVRSCPPNL 204

Query: 268 --LNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
              N VI GF   G   KA   FL M    G+ P   TY  VI  L  +     AE VF+
Sbjct: 205 VSYNTVINGFFTEGQVDKAYNLFLDMTDQ-GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ 263

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ + G++P    Y  L+ GY+ +G  K+   ++ EM   G+ PD  TY LL+D     G
Sbjct: 264 QMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG 323

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   AR +   M     KP+  IY  IL GY  +G        L  M  +G+ P+ + +N
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++   F K   +  AM  F++M  +G+ P+ + + TLID   K GR D AE  F +M   
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE 443

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT-------------- 550
           G  P    +  ++  L   ++WE    L   M  QG+ PNVV + T              
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503

Query: 551 --LVDIYGQSGRFDDAI--------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
             L+D+  + G   D I         CL G +D+A     +M + GLKP+    N+L++ 
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  D R  +A++V Q M  NG+ P VVTY T++  L +  +F +    YL
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 216/513 (42%), Gaps = 55/513 (10%)

Query: 166 YSILIHAL------GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y+I+I  L       R+E +++  ++ +  R   +TY  LI         ++ + ++ +M
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQ-MIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM 300

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   D   Y L++  L +  K   +  +KL+  +    I+ D  +   ++ G+A  G
Sbjct: 301 SAHGLEPDCFTYGLLLDYLCKKGKCTEA--RKLFDSMIRKGIKPDVSIYGIILHGYATKG 358

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             S+   FL +  G G+SP    +  V  A +      EA  +F ++++ GL P    Y 
Sbjct: 359 ALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYA 418

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+    K+G + DAE   ++M   GV P+   ++ L+       +WE A  +  EM   
Sbjct: 419 TLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID---TFGK---- 452
              PN   ++ I+      G   +  +++  M+  G  PD   YN +I      GK    
Sbjct: 479 GIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEA 538

Query: 453 ------------------YNCLHH----------AMAAFDRMLSEGIEPDTITWNTLIDC 484
                             YN L H          A + F  MLS GI P  +T+NT++  
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            FK  R+  A+EL+  M   G      TYNI++N L +    ++  ++  ++ ++ L  +
Sbjct: 599 LFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVD 658

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           ++T+  ++    + GR +DA+           N F  +  +GL P       +     E+
Sbjct: 659 IITFNIMIGALLKDGRKEDAM-----------NLFATISANGLVPDVTTYRLIAENLIEE 707

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               E   +   M+++G  P+ +    L++ L+
Sbjct: 708 GSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 146/357 (40%), Gaps = 70/357 (19%)

Query: 355 EFVVSEMER------SGVLPDEHTYSLLIDAYANAGR---------------W------- 386
           E VVS   R      S V PD  TYS+L+  +   GR               W       
Sbjct: 73  ELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVV 132

Query: 387 ---------------ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
                          E+  ++L+ M      PN   Y+ +L G+ D    +   ++L  M
Sbjct: 133 VNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMM 192

Query: 432 KSSGVE---PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
               V    P+   YN +I+ F     +  A   F  M  +GI P+ +T+  +ID   K 
Sbjct: 193 ADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKA 252

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              DRAE +F++M ++G  P   TY  +I+      +W++V R+L  M A GL P+  TY
Sbjct: 253 QVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTY 312

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FRVMRT 584
             L+D   + G+  +A +  + +  + +                            +M  
Sbjct: 313 GLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVG 372

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +G+ P++   N +  AF +     EA  +   M++ GL P+VV Y TL+ AL ++ +
Sbjct: 373 NGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 104/260 (40%), Gaps = 54/260 (20%)

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD----------------------------- 464
           S V PD   Y++++  F +   L H  AAF                              
Sbjct: 88  SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVG 147

Query: 465 --------RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM---QERGYFPCTTTY 513
                   RM   G  P+ +++NTL+       R + A EL   M   Q R   P   +Y
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +IN    + + +    L  +M  QG+ PNVVTYT ++D             C   + D
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGL-----------CKAQVVD 256

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A   F+ M   G++P+ +    LI+ +    +  E   +L+ M  +GL+PD  TY  L+
Sbjct: 257 RAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLL 316

Query: 634 KALIRVDKF---HKVFSSYL 650
             L +  K     K+F S +
Sbjct: 317 DYLCKKGKCTEARKLFDSMI 336



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 155/372 (41%), Gaps = 23/372 (6%)

Query: 96  NSESASALASSPSSLNRV---EFKLAESYRAVPAP---LWHSLLKNLCSSNS---SIDLA 146
           N  + + L  +   L RV   E K  +      AP   ++ SL+  LC+ +    + +L 
Sbjct: 413 NVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELF 472

Query: 147 YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISA-- 202
           + +V+     N+ +   ++ ++     GR  K      L +R    P  ++YNALI    
Sbjct: 473 FEMVNQGIHPNVVFFNTIMCNLCTE--GRVMKAQRLIDLMERVGTRPDIISYNALIRGHC 530

Query: 203 -CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
              + D+  K L++M  +      C    Y+ ++    R  +ID +    +++E+  + I
Sbjct: 531 LVGKTDEASKLLDIMLSVGLKPNEC---TYNTLLHGYCRDGRIDDA--YSVFQEMLSNGI 585

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
                  N ++ G  K    S+A   +L M    G      TY  ++  LS +    EA 
Sbjct: 586 TPVVVTYNTILHGLFKTRRFSEAKELYLNMITS-GKQWSIYTYNIILNGLSKNNCVDEAL 644

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +F+ L    L+     +N ++   +K G  +DA  + + +  +G++PD  TY L+ +  
Sbjct: 645 KMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENL 704

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G  E    +  EME S   PNS + + ++     RG+  R    L ++       + 
Sbjct: 705 IEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEA 764

Query: 441 HFYNVMIDTFGK 452
              +++I  F +
Sbjct: 765 STTSMLISLFSR 776


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 234/498 (46%), Gaps = 30/498 (6%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLE 210
           H +C    + ++ L++ L R  ++ EA  L  R     L P  +TY  ++    +  D  
Sbjct: 170 HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 211 KALNLMSKMRQ-DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            ALNL+ KM +      + + YS +I  L +  +   +  Q L+ E++   I  +    N
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA--QNLFSEMQEKGISPNLFTYN 287

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I GF  +G  S+A R L       +SP   T++ +I AL   G+  EAE ++ E+   
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P T  YN+++ G+ K   L  AE +   M   G  PD  T+S+LID Y  A R +  
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L EM       N+  Y+ ++ G+   G       +L+EM SSGV P+    N ++D 
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467

Query: 450 FGKYNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
                 L  A+  F  M               +EPD  T+N LI      G++  AEEL+
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELY 527

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           EEM  RG  P T TYN +I+ L +Q R ++  ++  +M ++G  P+VVT+TTL++ Y + 
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKV 587

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           GR  D +E            F  M   G+  + +   +LI+ F +      A  + Q M 
Sbjct: 588 GRVGDGLE-----------VFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636

Query: 619 ENGLKPDVVTYTTLMKAL 636
            +G+ PD +T   ++  L
Sbjct: 637 SSGVYPDTITIRNMLTGL 654



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 214/483 (44%), Gaps = 42/483 (8%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++  LI        L  AL+   K+ + G+H   + +S ++  L   +++  +L    + 
Sbjct: 113 SFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL--HFFH 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +I    +     L+N    G  + G   +A+  L      GL P   TY  ++  +   G
Sbjct: 171 QICKPNVIAFTTLMN----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226

Query: 315 RTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            T+ A  +  +++E S +KP    Y+A++ G  K G   DA+ + SEM+  G+ P+  TY
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +I+ + ++GRW  A+ +L+EM      P+   +S ++      G++    ++  EM  
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP 346

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+T  YN MID F K N L  A   F  M ++G  PD IT++ LID +    R D 
Sbjct: 347 RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDD 406

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +L  EM  RG    T TY  +I+   +         LL  M + G+ PNVVT  TL+D
Sbjct: 407 GMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLD 466

Query: 554 IYGQSGRFDDAIECL-----------------------------------EGLSDQAVNA 578
               +G+  DA+E                                     EG   +A   
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  M   GL P  +  NS+I+   +  R  EA  +   M   G  PDVVT+TTL+    +
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586

Query: 639 VDK 641
           V +
Sbjct: 587 VGR 589



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 252/552 (45%), Gaps = 37/552 (6%)

Query: 122 RAVPAPLWH--SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R +P  ++    L+K  CS +    L +A+ ++ +   L +   L+ +S L+H L   ++
Sbjct: 105 RRIPCNIYSFTILIKCFCSCSK---LPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDR 161

Query: 179 LYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           + EA     Q  +   + +  L++   R   + +A+ L+ +M +DG   + I Y  ++  
Sbjct: 162 VSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 221

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           + +     S+L   L K  E  +I+ +  + + +I G  K G  + A       Q  G+S
Sbjct: 222 MCKMGDTVSAL-NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I    +SGR  EA+ +  E+ E  + P    ++ L+   VK G   +AE +
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
            +EM   G++P+  TY+ +ID ++   R ++A  +   M      P+   +S ++ GY  
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                   ++L EM   G+  +T  Y  +I  F +   L+ A+     M+S G+ P+ +T
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQERW 526
            NTL+D     G+   A E+F+ MQ+               P   TYNI+I  L  + ++
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            + + L   M  +GL+P+ +TY +++D   +  R D+A +            F  M + G
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ-----------MFDSMGSKG 569

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV------- 639
             P  +   +LIN + +  R  +   V   M   G+  + +TY TL+    +V       
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629

Query: 640 DKFHKVFSSYLF 651
           D F ++ SS ++
Sbjct: 630 DIFQEMISSGVY 641



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 205/451 (45%), Gaps = 20/451 (4%)

Query: 209 LEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           L+ A++L   M R     C  I++  ++  + R  + D  ++  L++++E  +I  +   
Sbjct: 57  LDDAIDLFGYMVRSRPLPC-VIDFCKLLGVVVRMERPD--VVISLHRKMEMRRIPCNIYS 113

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
              +I  F        A+   G    +G  P   T++ ++  L    R  EA   F ++ 
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI- 172

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
               KP   A+  L+ G  + G + +A  ++  M   G+ P++ TY  ++D     G   
Sbjct: 173 ---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 388 SARIVLKEME-VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           SA  +L++ME VS  KPN  IYS I+ G    G       +  EM+  G+ P+   YN M
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ F        A      M    + PD +T++ LI+   K G++  AEEL+ EM  RG 
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P T TYN MI+   +Q R +  +R+   M  +G  P+V+T++ L+D Y  + R DD ++
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            L  +S +           GL  + +   +LI+ F +      A  +LQ M  +G+ P+V
Sbjct: 410 LLHEMSRR-----------GLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNV 458

Query: 627 VTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           VT  TL+  L    K       +      KM
Sbjct: 459 VTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 33/475 (6%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
            +++  R     + +  L+    R +  +  ++L  KM      C+  +++++I+     
Sbjct: 65  GYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSC 124

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +K+  +L    + +I   K+     L+  + ++ G       S+A+ F          P 
Sbjct: 125 SKLPFAL--STFGKIT--KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPN 176

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
              +  ++  L   GR +EA A+ + + E GL+P    Y  ++ G  KMG    A  ++ 
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236

Query: 360 EMER-SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           +ME  S + P+   YS +ID     GR   A+ +  EM+     PN F Y+ ++ G+   
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G W    ++L+EM    + PD   ++V+I+   K      A   ++ ML  GI P+TIT+
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITY 356

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N++ID   K  R D AE +F  M  +G  P   T++I+I+     +R +D  +LL  M  
Sbjct: 357 NSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSR 416

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL+ N +TYTTL+  + Q G  + A++ L+            M + G+ P+ +  N+L+
Sbjct: 417 RGLVANTITYTTLIHGFCQLGNLNAALDLLQE-----------MISSGVCPNVVTCNTLL 465

Query: 599 NAFGEDQRDAEAFAVLQYMKE-----------NGLKPDVVTYTTLMKALIRVDKF 642
           +    + +  +A  + + M++           N ++PDV TY  L+  LI   KF
Sbjct: 466 DGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 193/444 (43%), Gaps = 22/444 (4%)

Query: 98  ESASALASSPSSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKH 156
           +    +  + S+LN +  K+ E  R  P   ++ +++  L       D A  + S +Q+ 
Sbjct: 220 DGMCKMGDTVSALNLLR-KMEEVSRIKPNVVIYSAIIDGLWKDGRQTD-AQNLFSEMQEK 277

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEK 211
            +  +    Y+ +I+    S +  EA  L +    ++++P  +T++ LI+A  +     +
Sbjct: 278 GISPNL-FTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A  L ++M   G   + I Y+ +I   ++ N++D++  ++++  +       D    + +
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA--ERMFYLMATKGCSPDVITFSIL 394

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G+  A      M+ L      GL   T TY  +I      G    A  + +E+  SG+
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAY 380
            P     N LL G    G LKDA  +   M++S            V PD  TY++LI   
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
            N G++  A  + +EM      P++  Y+ ++ G   +       Q+   M S G  PD 
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             +  +I+ + K   +   +  F  M   GI  + IT+ TLI    + G  + A ++F+E
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQE 634

Query: 501 MQERGYFPCTTTYNIMINLLGEQE 524
           M   G +P T T   M+  L  +E
Sbjct: 635 MISSGVYPDTITIRNMLTGLWSKE 658



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 125/293 (42%), Gaps = 18/293 (6%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARN 206
           +L     C    + +SILI     ++++ +   LL +  R       +TY  LI    + 
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG- 265
            +L  AL+L+ +M   G   + +  + ++  L    K+  +L  +++K ++  K++LD  
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDAL--EMFKVMQKSKMDLDAS 494

Query: 266 ----------QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                     Q  N +I G    G  S+A          GL P T TY +VI  L    R
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +F+ +   G  P    +  L+ GY K+G + D   V  EM R G++ +  TY  
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           LI  +   G    A  + +EM  S   P++     +L G   + E +R  Q L
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 267/564 (47%), Gaps = 25/564 (4%)

Query: 94  NSNSESASALASSPSSLNRVE-----FKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAY 147
           NS+S     +  S S LN ++       LA+S   +P  L ++S+L  +  S  S+ L+ 
Sbjct: 139 NSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSA 198

Query: 148 AVVSWLQKHNLCYSYELLYSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISA 202
             V      +        Y+ILI    ++G  +K    F   +R    P  +TYN LI A
Sbjct: 199 EEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL-YKEIECD 259
             +   +++A  L+  M   G   + I+Y+++I  L R   +  +  +L+++ YK    D
Sbjct: 259 YCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPD 318

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           ++       N ++ G+ K G+  +A+         G+SP   TY A+I ++  +     A
Sbjct: 319 EVTY-----NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
              F++++  GL+P  + Y  L+ G+ + G L +A  +++EM  SG  P   TY+  I  
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           +    R E A  V++EM      P+   YS I++G+  +GE  R FQ+ +EM   GV PD
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              Y+ +I    +   L  A      ML  G+ PD  T+ TLI+ +   G  ++A  L +
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM  +G+ P   TY+++IN L +Q R  + KRLL  +  +  +P+ VTY TL++    + 
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NCSNI 612

Query: 560 RFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
            F   +      C++GL  +A   F  M     KP     N +I+         +AF + 
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 672

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
           + M  +G  P  VT  TL+KAL +
Sbjct: 673 KEMIHSGFVPHTVTVITLIKALFK 696



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 13/322 (4%)

Query: 327 KESGLKPRTKAYNALLKGYVK-MGYLK-DAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           K SG  P   +YN++L   V+  G +K  AE V  EM RS V P+ +TY++LI  + + G
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVG 228

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             +       EME +   PN   Y+ ++  Y   G     F +LK M S G++P+   YN
Sbjct: 229 ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYN 288

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           V+I+   +   +  A    + M  +G  PD +T+NTL++ + K G + +A  +  EM   
Sbjct: 289 VIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRN 348

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P   TY  +IN + +             MR +GL PN  TYTTL+D + + G  ++A
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA 408

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
              L  +++            G  PS +  N+ I+     +R  EA  V+Q M E GL P
Sbjct: 409 YRILNEMTE-----------SGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457

Query: 625 DVVTYTTLMKALIRVDKFHKVF 646
           DVV+Y+T++    R  +  + F
Sbjct: 458 DVVSYSTIISGFCRKGELDRAF 479



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 167/399 (41%), Gaps = 22/399 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+++ ++  L  A     + R+  L     TY  LI   +R   L +A  ++++M 
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+    + Y+  I       +++ +L   + +E+    +  D    + +I GF + G+
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEAL--GVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +        G+SP   TY+++I  L    R  EA  + +E+ + GL P    Y  
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 534

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y   G L  A  +  EM   G LPD  TYS+LI+      R   A+ +L ++    
Sbjct: 535 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 594

Query: 401 AKPNSFIYSRIL---------------AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           + P+   Y  ++                G+  +G      +V + M     +P    YNV
Sbjct: 595 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 654

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I    +   L  A   +  M+  G  P T+T  TLI   FK G  +   E+  +     
Sbjct: 655 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSC 714

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                    +++ +  ++   E V  +L +M   GLLPN
Sbjct: 715 RLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 44/287 (15%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D H   L +        +++A+ + +E+ +S + P+                    FQ L
Sbjct: 88  DSHCKCLSLHILTRFKLYKTAQTLAQELALSASDPSG----------------SSIFQCL 131

Query: 429 KEMKSSGVEPDTHFYN-------VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           K+          H YN       +M+ ++   N +  A+   +   S G  P  +++N++
Sbjct: 132 KD--------SYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSV 183

Query: 482 IDCHFKCGRYDR--AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +D   +     +  AEE++ EM      P   TYNI+I         +      G M   
Sbjct: 184 LDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN 243

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G LPNVVTY TL+D Y + GR D+A   L+ +S +           G++P+ ++ N +IN
Sbjct: 244 GCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-----------GMQPNLISYNVIIN 292

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
               +    EA+ +L+ M   G  PD VTY TL+    +   FH+  
Sbjct: 293 GLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 339



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 134/330 (40%), Gaps = 22/330 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+  IH     E++ EA  + Q    + L P  ++Y+ +IS   R  +L++A  +  +M 
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D + YS +IQ L    ++  +    L +E+    +  D      +I  +   GD
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEAC--DLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA---------------EAVFEE 325
            +KA+         G  P   TY+ +I  L+   RT EA               +  ++ 
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L E+      K+  AL+KG+   G + +A+ V   M      P E  Y+++I  +   G 
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 664

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  + KEM  S   P++     ++      G  +   +V+ +   S    +     V
Sbjct: 665 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKV 724

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
           +++   K   +   +     M  +G+ P++
Sbjct: 725 LVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 237/502 (47%), Gaps = 31/502 (6%)

Query: 164 LLYSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ LI+ L +  K+ EA  +LSQ  +  L+P   TY +LI    RN +L+ A  +  +
Sbjct: 199 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L    ++D +L   + +E+    IE         I      
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEAL--DMLEEMIEKGIEPTVYTYTLPITALCAI 316

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+  +   +  G  P   TY A+I+ LS  G+   A  ++ ++ + GL P T  Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G    A  +   ME  G L +  TY+ +I      G  E A ++ ++M  
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P    Y+ ++ GY  +G      ++L  MK +G EPD   YN ++  F K+  L  
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M+  G+ P+ +++  LID H K G+ D A  L + M+E G  P   +YN +IN
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
            L ++ R+ + +++   M  QGLLPNV+TYTTL+D   ++GR   A +            
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C EG +D+A    + M   GL P  +   SLI+ F    R   AF +L
Sbjct: 617 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 676

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
           + M + G KP+  TY+ L+K L
Sbjct: 677 RRMVDMGCKPNYRTYSVLLKGL 698



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 206/464 (44%), Gaps = 26/464 (5%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I AC   +++ +  + ++++   G+     + + ++  L +   ++ +  + LYK++  
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA--RNLYKQMLN 191

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I+      N +I   +K G   +A   L       LSP   TY ++I     +     
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VF+ + + G  P +  Y+ L+ G    G + +A  ++ EM   G+ P  +TY+L I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A       E A  ++  M+    +PN   Y+ +++G    G+ +    +  +M   G+ P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +T  YN +I+          A+  F  M   G   +T T+N +I      G  ++A  LF
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E+M + G  P   TYN +IN    +    +  RLL  M+  G  P+  TY  LV  + + 
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491

Query: 559 GR-------FDDAIEC-----------------LEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           G+       F + +EC                  +G  D A++  + M   G  P+  + 
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           N++IN   ++ R +EA  +   M E GL P+V+TYTTL+  L R
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 155/364 (42%), Gaps = 37/364 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY ALIS  +R   LE A+ L  KM ++G   + + Y+ +I  L    +  ++L  K++ 
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL--KIFH 397

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E      + Q  N++I G    GD  KAM        +G  P   TY  +I      G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  + + +KE+G +P    YN L+ G+ K G L+ A F   EM   G+ P+  +Y+
Sbjct: 458 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYT 517

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID ++  G+ + A  +LK ME     PN   Y+ ++ G      +    ++  +M   
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577

Query: 435 GVEPDTHFYNVMIDTFG----------------KYNCLHH-------------------A 459
           G+ P+   Y  +ID                   K  CL +                   A
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M  +G+ PD +T+ +LID     GR D A  L   M + G  P   TY++++  
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697

Query: 520 LGEQ 523
           L ++
Sbjct: 698 LQKE 701



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 14/366 (3%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL    G+G      +   ++  L+       A  +++++  SG++P    +N L+    
Sbjct: 150 FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G +++AE ++S++ +  + PD  TY+ LI  +      + A  V   M      PNS 
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS ++ G  + G       +L+EM   G+EP  + Y + I           A+    RM
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G  P+  T+  LI    + G+ + A  L+ +M + G  P T TYN +IN L    R+
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
               ++   M   G L N  TY  ++              CL G  ++A+  F  M   G
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGL-----------CLGGDIEKAMVLFEKMLKMG 438

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P+ +  N+LIN +        A  +L  MKENG +PD  TY  L+       K+ K+ 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF---SKWGKLE 495

Query: 647 SSYLFF 652
           S+  +F
Sbjct: 496 SASFYF 501



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 20/258 (7%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P   I   ++   R+  E +R    L E+   G     +  N ++    K+  +  A   
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           + +ML+ GI+P  +T+NTLI+   K G+   AE +  ++ +    P   TY  +I  LG 
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI--LGH 243

Query: 523 -QERWEDVK-RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            + R  D+   +   M  +G  PN VTY+TL++     GR D+A++ LE + ++      
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK------ 297

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                G++P+       I A    + + EA  ++  MK+ G +P+V TYT L+  L R+ 
Sbjct: 298 -----GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352

Query: 641 KFHKVFSSYLFFNIYKML 658
           K       Y     +KML
Sbjct: 353 KLEVAIGLY-----HKML 365



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 9/204 (4%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P P+ ++ L +  S +  +D+A +++  +++   C      Y+ +I+ L +  +  EA  
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG-CNPNVESYNAVINGLSKENRFSEAEK 569

Query: 185 LSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           +  +   Q L P  +TY  LI    RN   + A  +   M +     +   YS +I  L 
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K D +  + L KE+E   +  D      +I GF   G    A   L     +G  P 
Sbjct: 630 QEGKADEA--EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687

Query: 300 TATYAAVITALSNSGRTIEAEAVF 323
             TY+ ++  L      +E E +F
Sbjct: 688 YRTYSVLLKGLQKECLLLE-EKIF 710


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 258/531 (48%), Gaps = 15/531 (2%)

Query: 117 LAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHA 172
           LA+SY  +P  L ++++L  +  +  S+ +A  +   + +  +    Y+Y +L      A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 173 LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
            G  E     F   +R    P  +TYN +I A  +   + +A  L+  M   G + + I+
Sbjct: 217 -GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLIS 275

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++VI  L R  ++  +   ++ +E+   +   D    N +I G+   G+  +A+     
Sbjct: 276 YNVVINGLCREGQMKET--SEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GLSP   TY  +I ++  +G    A    +++++ GL P  + Y  L+ G+ + G+
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           LK A  ++ EM  +G  P   TY+ LI+ +   GR E A  +L+EM      P+   YS 
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I++G+    E ++ FQ+  EM + G+ PD   Y+ +I    K   L      F  MLS G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + PD +T+ +LI+ +   G  D+A  L +EM ++G+ P   TYN++IN   +Q R ++ K
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTD 585
           RLL  +  +  +PN +TY TL+D    +  F  A+      C++GL ++A      M   
Sbjct: 574 RLLLKLLYEESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQK 632

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           G K +    N +I+   +     +A+ + + M  +G  P  VT   L K+L
Sbjct: 633 GYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 12/442 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ ++ +CAR + + KAL++++  +  G+    ++Y+ ++ ++ RT K    + + ++K
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT-KQSVKIAEGIFK 192

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  +    N +I GF  AG+    + F G  +  G  P   TY  +I A     
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +   +   GL P   +YN ++ G  + G +K+   ++ EM +   +PD  T++
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+ Y N G +  A ++  EM  +   PN   Y+ ++      G   R  + L +M+  
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P+   Y  +ID F +   L  A      M+  G  P  IT+N LI+ H   GR + A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM ERG+ P   +Y+ +I+     +  E   +L   M A+G+ P+V TY++L+  
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +  R  +  +            F+ M + GL P  +   SLINA+  +    +A  + 
Sbjct: 493 LCKQRRLGEVCD-----------LFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
             M + G  PD+VTY  L+   
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGF 563



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 193/376 (51%), Gaps = 12/376 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           V+   A+    +KA+  + +A+  G  P   +Y A++ A+  + ++++ AE +F+E+ ES
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    YN L++G+   G L+       EMER+G LP+  TY+ +IDAY    +   A
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+ M +    PN   Y+ ++ G    G+ + T ++L+EM      PD   +N +I+ 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +      H A+     M+  G+ P+ +T+ TLI+   K G  +RA E  ++M++RG  P 
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY  +I+   +Q   +   +++  M   G  P ++TY  L++ +   GR +DA   L+
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            + ++           G  P  ++ +++I+ F  +Q   +AF +   M   G+ PDV TY
Sbjct: 438 EMIER-----------GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 630 TTLMKALIRVDKFHKV 645
           ++L++ L +  +  +V
Sbjct: 487 SSLIQGLCKQRRLGEV 502



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVV 358
           +A +  V+ + +      +A ++    K  G  P   +YNA+L   ++    +K AE + 
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM  SGV P+ +TY++LI  +  AG  E       EME +   PN   Y+ I+  Y   
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            +    F++L+ M   G+ P+   YNV+I+   +   +       + M      PD +T+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NTLI+ +   G + +A  L  EM + G  P   TY  +IN + +          L  MR 
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL PN  TYTTL+D + Q           +G   QA    + M  +G  P+ +  N+LI
Sbjct: 372 RGLHPNGRTYTTLIDGFSQ-----------QGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N      R  +A  +LQ M E G  PDVV+Y+T++    R  +  K F
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/534 (21%), Positives = 208/534 (38%), Gaps = 94/534 (17%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ L++  C++  ++++       +++ N C    + Y+ +I A  +  K+ EAF L + 
Sbjct: 206 YNILIRGFCTA-GNLEMGLXFFGEMER-NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             L  L     +YN +I+   R   +++   ++ +M +  Y  D + ++ +I        
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +L+  L+ E+  + +  +      +I    KAG+ ++AM FL   +  GL P   TY
Sbjct: 324 FHQALV--LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I   S  G   +A  + +E+ E+G  P    YNAL+ G+  +G ++DA  ++ EM  
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG--------- 414
            G +PD  +YS +I  +      E A  +  EM      P+   YS ++ G         
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501

Query: 415 --------------------------YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                                     Y   G+  +  ++  EM   G  PD   YNV+I+
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLIN 561

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-----------------C------- 484
            F K +    A     ++L E   P+ IT+NTLID                 C       
Sbjct: 562 GFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNE 621

Query: 485 --------------------------HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                     H K G  ++A  L++EM   G+ P + T   +  
Sbjct: 622 ADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAK 681

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            L  + +  ++ +LL        +        L+ I  + G  D     L+ ++
Sbjct: 682 SLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 117/295 (39%), Gaps = 52/295 (17%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++Y+ +IS   RN +LEKA  L  +M   G   D   YS +IQ L +  ++    +  L+
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE--VCDLF 506

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    +  D      +I  +   GD  KA+R        G SP   TY  +I   +  
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYN---------------ALLKGYVKMGYLKDAEFVV 358
            RT EA+ +  +L      P    YN               AL+KG+   G + +A+ V+
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI----------- 407
             M + G   +E  Y+++I  ++  G  E A  + KEM  S   P+S             
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 408 -----------------------YSRILAGYRDR-GEWQRTFQVLKEMKSSGVEP 438
                                   +++L G   + G     F VLK+M  SG+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 258/531 (48%), Gaps = 15/531 (2%)

Query: 117 LAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHA 172
           LA+SY  +P  L ++++L  +  +  S+ +A  +   + +  +    Y+Y +L      A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 173 LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
            G  E     F   +R    P  +TYN +I A  +   + +A  L+  M   G + + I+
Sbjct: 217 -GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLIS 275

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++VI  L R  ++  +   ++ +E+   +   D    N +I G+   G+  +A+     
Sbjct: 276 YNVVINGLCREGQMKET--SEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GLSP   TY  +I ++  +G    A    +++++ GL P  + Y  L+ G+ + G+
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           LK A  ++ EM  +G  P   TY+ LI+ +   GR E A  +L+EM      P+   YS 
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I++G+    E ++ FQ+  EM + G+ PD   Y+ +I    K   L      F  MLS G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + PD +T+ +LI+ +   G  D+A  L +EM ++G+ P   TYN++IN   +Q R ++ K
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTD 585
           RLL  +  +  +PN +TY TL+D    +  F  A+      C++GL ++A      M   
Sbjct: 574 RLLLKLLYEESVPNEITYNTLID-NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQK 632

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           G K +    N +I+   +     +A+ + + M  +G  P  VT   L K+L
Sbjct: 633 GYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSL 683



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 12/442 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ ++ +CAR + + KAL++++  +  G+    ++Y+ ++ ++ RT K    + + ++K
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRT-KQSVKIAEGIFK 192

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  +    N +I GF  AG+    + F G  +  G  P   TY  +I A     
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +   +   GL P   +YN ++ G  + G +K+   ++ EM +   +PD  T++
Sbjct: 253 KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+ Y N G +  A ++  EM  +   PN   Y+ ++      G   R  + L +M+  
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P+   Y  +ID F +   L  A      M+  G  P  IT+N LI+ H   GR + A
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM ERG+ P   +Y+ +I+     +  E   +L   M A+G+ P+V TY++L+  
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +  R  +  +            F+ M + GL P  +   SLINA+  +    +A  + 
Sbjct: 493 LCKQRRLGEVCD-----------LFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
             M + G  PD+VTY  L+   
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGF 563



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 194/376 (51%), Gaps = 12/376 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           V+   A+    +KA+  + +A+  G  P   +Y A++ A+  + ++++ AE +F+E+ ES
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    YN L++G+   G L+   F   EMER+G LP+  TY+ +IDAY    +   A
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+ M +    PN   Y+ ++ G    G+ + T ++L+EM      PD   +N +I+ 
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +      H A+     M+  G+ P+ +T+ TLI+   K G  +RA E  ++M++RG  P 
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPN 377

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY  +I+   +Q   +   +++  M   G  P ++TY  L++ +   GR +DA   L+
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQ 437

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            + ++           G  P  ++ +++I+ F  +Q   +AF +   M   G+ PDV TY
Sbjct: 438 EMIER-----------GFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 630 TTLMKALIRVDKFHKV 645
           ++L++ L +  +  +V
Sbjct: 487 SSLIQGLCKQRRLGEV 502



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVV 358
           +A +  V+ + +      +A ++    K  G  P   +YNA+L   ++    +K AE + 
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM  SGV P+ +TY++LI  +  AG  E       EME +   PN   Y+ I+  Y   
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            +    F++L+ M   G+ P+   YNV+I+   +   +       + M      PD +T+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NTLI+ +   G + +A  L  EM + G  P   TY  +IN + +          L  MR 
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL PN  TYTTL+D + Q           +G   QA    + M  +G  P+ +  N+LI
Sbjct: 372 RGLHPNGRTYTTLIDGFSQ-----------QGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N      R  +A  +LQ M E G  PDVV+Y+T++    R  +  K F
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 113/534 (21%), Positives = 208/534 (38%), Gaps = 94/534 (17%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ L++  C++  ++++       +++ N C    + Y+ +I A  +  K+ EAF L + 
Sbjct: 206 YNILIRGFCTA-GNLEMGLFFFGEMER-NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             L  L     +YN +I+   R   +++   ++ +M +  Y  D + ++ +I        
Sbjct: 264 MALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGN 323

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +L+  L+ E+  + +  +      +I    KAG+ ++AM FL   +  GL P   TY
Sbjct: 324 FHQALV--LHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I   S  G   +A  + +E+ E+G  P    YNAL+ G+  +G ++DA  ++ EM  
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG--------- 414
            G +PD  +YS +I  +      E A  +  EM      P+   YS ++ G         
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501

Query: 415 --------------------------YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                                     Y   G+  +  ++  EM   G  PD   YNV+I+
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLIN 561

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-----------------C------- 484
            F K +    A     ++L E   P+ IT+NTLID                 C       
Sbjct: 562 GFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNE 621

Query: 485 --------------------------HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                     H K G  ++A  L++EM   G+ P + T   +  
Sbjct: 622 ADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAK 681

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            L  + +  ++ +LL        +        L+ I  + G  D     L+ ++
Sbjct: 682 SLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMA 735



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 117/295 (39%), Gaps = 52/295 (17%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++Y+ +IS   RN +LEKA  L  +M   G   D   YS +IQ L +  ++    +  L+
Sbjct: 449 VSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE--VCDLF 506

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    +  D      +I  +   GD  KA+R        G SP   TY  +I   +  
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYN---------------ALLKGYVKMGYLKDAEFVV 358
            RT EA+ +  +L      P    YN               AL+KG+   G + +A+ V+
Sbjct: 567 SRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVL 626

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI----------- 407
             M + G   +E  Y+++I  ++  G  E A  + KEM  S   P+S             
Sbjct: 627 ESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHE 686

Query: 408 -----------------------YSRILAGYRDR-GEWQRTFQVLKEMKSSGVEP 438
                                   +++L G   + G     F VLK+M  SG+ P
Sbjct: 687 GKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 239/510 (46%), Gaps = 54/510 (10%)

Query: 140  NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--L 194
            N  +D A  ++  ++KH  C    + Y+ L+  LG++ +L EA  L    ++Q   P  +
Sbjct: 541  NGHVDEAVKLLEVMKKHE-CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            TY++L+++  + D  E++L+L  +M + G   D   YSLVI  L +++ +D         
Sbjct: 600  TYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD--------- 650

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                                        +A+   G  +  G+ P    Y  ++++L    
Sbjct: 651  ----------------------------QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
            +   A  +F EL+ES L P T  YN ++ G VK   + +A  +V  M+   +LPD  TY+
Sbjct: 683  KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             L+D    +GR E A  +  +M     +P+   Y+ ++      G+      + + M   
Sbjct: 743  SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
               PD   Y+ +ID+ GK   +  A   F+  +S+G  P+   +++LID   K G  DRA
Sbjct: 803  RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             ELFEEMQ R   P   TYN +++ L +  R    ++LL  M   G +P++VTY  L+D 
Sbjct: 863  LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922

Query: 555  YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             G+            G+ D+A + F+ M+  G+ P  +   SLI + G+  +  EA  + 
Sbjct: 923  VGKM-----------GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971

Query: 615  QYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              M+E G  P VVTY  L+  L R  K H+
Sbjct: 972  DSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/558 (25%), Positives = 245/558 (43%), Gaps = 87/558 (15%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           + I +H+  RS +L  A    Q    + +     T+  LI A  ++ ++++A    + M+
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 + + Y+ ++  L +  +++ +   +++ E++ +    D    N +I G  KAG+
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEAC--EVFVEMKENNCSPDAIAYNTLIDGLGKAGE 407

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A  A       +  GL P   TY  +I+ L  +GR  EA  +F +LKE G  P    YN 
Sbjct: 408 ADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNT 467

Query: 341 LLKGYVKMGYLKDAEFVVSEM------------------------ERSGVLPD------- 369
           L+    K G +     ++ EM                        +R+   P        
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLG 527

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E TY+ L+ A+ + G  + A  +L+ M+     P    Y+ ++ G    G       +L+
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587

Query: 430 EMKSSGVEPDTHFYNVMIDTFGK-----------------------------YNCL---- 456
           EM+  G EP    Y+ ++ +F K                              NCL    
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647

Query: 457 --HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
               A+  F RM  EG+EP    + TL+    K  + D A ++F E+QE    P T  YN
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           IM+N L +  R ++  +L+ +M+ Q +LP++ TYT+L+D  G+SGR ++A          
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAF--------- 758

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             N F  M  +G +P  +A  SL++  G+  + + A  + + M +    PDVVTY++L+ 
Sbjct: 759 --NMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLID 816

Query: 635 ALIRVDKFHKVFSSYLFF 652
           +L    K  +V  +Y FF
Sbjct: 817 SL---GKEGRVEEAYYFF 831



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 204/479 (42%), Gaps = 96/479 (20%)

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +QDGY      Y+L+I+ L    + D+   +L  ++KE    +I +   LL  ++  F  
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKE--GHRISM--HLLTSLLRTFGS 229

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             + S A+      +  G +P T  Y  V+  L   G    A  VF +L +  ++P  + 
Sbjct: 230 TNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQT 289

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +   +  + + G L  A   + EM +SG+ P  HT+++LIDA   +G  + A        
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEA-------- 341

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                                    + F  +K ++ S   P+   Y  +++   K   L 
Sbjct: 342 ------------------------CKFFNGMKNLRCS---PNVVTYTTLVNGLAKAGRLE 374

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  M      PD I +NTLID   K G  D A  LF+EM++RG  P   TYNIMI
Sbjct: 375 EACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMI 434

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-----------E 566
           ++LG+  R  +  +L  +++ QG +P+V TY TL+D+ G+ G+ D  +           E
Sbjct: 435 SVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE 494

Query: 567 CL--------------------------------------------EGLSDQAVNAFRVM 582
           C+                                             G  D+AV    VM
Sbjct: 495 CIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVM 554

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +     P+ +   +L++  G+  R  EA ++L+ M++ G +P VVTY++LM +  + D+
Sbjct: 555 KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQ 613



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 182/402 (45%), Gaps = 44/402 (10%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLS-- 186
            + +LL +L   +  ID A  + + LQ+ +L      +Y+I+++ L +S ++ EA  L   
Sbjct: 671  YKTLLSSLVK-DEKIDFALQIFNELQESSLVPD-TFVYNIMVNGLVKSNRVDEACKLVDS 728

Query: 187  -QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             + Q + P   TY +L+    ++  LE+A N+ +KM ++G+  D + Y+ ++  L +  K
Sbjct: 729  MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788

Query: 244  IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +  +L+                                     F  MA+   + P   TY
Sbjct: 789  LSHALII------------------------------------FRAMAKKRCV-PDVVTY 811

Query: 304  AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++I +L   GR  EA   FE     G  P    Y++L+  + K G +  A  +  EM+R
Sbjct: 812  SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 364  SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                P+  TY+ L+   A AGR   A  +L+EME     P+   Y+ ++ G    G    
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 424  TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                 K MK  G+ PD   +  +I++ GK + L  A   FD M  EG  P  +T+N LID
Sbjct: 932  AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991

Query: 484  CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
               + G+   A  +F EM+ +G  P   T  IM  +L  +E+
Sbjct: 992  ILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQ 1033


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 244/513 (47%), Gaps = 54/513 (10%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           H +GR+ +L +     +++ L P  ++Y A+I+      DL  A  L+ KM   G   + 
Sbjct: 417 HNMGRALELLDEM---EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 473

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + YS++I +     +I+ +  ++L   + C  +  D    N +I   +KAG   +A  +L
Sbjct: 474 VVYSILIMAYASEGRIEEA--RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              QG GL P   T+ A I   S +G+  EA   F+E+ + GL P    Y  L+ G+ K 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L +A  +   +   GVLPD  T S  I      GR + A  V  E++     P+ F Y
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S +++G+  +GE ++ F++  EM   G+ P+   YN ++D   K   +  A   FD M  
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 469 EGIEPDTITWNTLIDCHFK--------------------------------C---GRYDR 493
           +G+EPD++T++T+ID + K                                C   G  ++
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF EM ++G F  T ++N +I+   +  + ++  +L   M A+ ++P+ VTYTT++D
Sbjct: 772 AMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + ++G+            ++A   F+ M+   L    +   SL+  + +  + +E FA+
Sbjct: 831 WHCKAGKM-----------EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + M   G+KPD VTY  ++ A  + D   + F
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 912



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 228/489 (46%), Gaps = 18/489 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNA---LISACARNDDLEKALNLMSKMR 220
           Y+I+   L R++++ EA L  +  + T L   YNA   LI    R  D+++ L +   M 
Sbjct: 301 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 360

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y+++I  L +  K++ +   ++ K +     + + +    +I G+ +  +
Sbjct: 361 SCGIPINLITYNVLIHGLCKFGKMEKA--AEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +   L P   +Y A+I  L +      A  + E++  SGLKP    Y+ 
Sbjct: 419 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSI 478

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y   G +++A  ++  M  SGV PD   Y+ +I   + AG+ E A   L E++   
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 538

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP++  +   + GY   G+     +   EM   G+ P+   Y V+I+   K   L  A+
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 598

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F R+ + G+ PD  T +  I    K GR   A ++F E++E+G  P   TY+ +I+  
Sbjct: 599 SIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 658

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +Q   E    L   M  +G+ PN+  Y  LVD   +SG    A +  +G+ ++      
Sbjct: 659 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK------ 712

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                GL+P ++  +++I+ + + +  AEAF++   M   G++P    Y  L+    +  
Sbjct: 713 -----GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 641 KFHKVFSSY 649
              K  + +
Sbjct: 768 DMEKAMNLF 776



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 231/536 (43%), Gaps = 67/536 (12%)

Query: 164  LLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSK 218
            ++YSILI A     ++ EA  L      + +      YNA+IS  ++   +E+A   + +
Sbjct: 474  VVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 533

Query: 219  MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            ++  G   D + +   I   ++T K+  +   K + E+    +  +  L   +I G  KA
Sbjct: 534  IQGRGLKPDAVTFGAFILGYSKTGKMTEA--AKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 279  GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            G+  +A+        +G+ P   T +A I  L  +GR  EA  VF ELKE GL P    Y
Sbjct: 592  GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 339  NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            ++L+ G+ K G ++ A  +  EM   G+ P+   Y+ L+D    +G  + AR +   M  
Sbjct: 652  SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 399  SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               +P+S  YS ++ GY         F +  EM S GV+P +  YN ++    K   +  
Sbjct: 712  KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 459  AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            AM  F  ML +G    T+++NTLID + K  +   A +LF+EM  +   P   TY  +I+
Sbjct: 772  AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830

Query: 519  LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------- 571
               +  + E+   L   M+ + L+ + VTYT+L+  Y + G+  +     E +       
Sbjct: 831  WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 890

Query: 572  --------------SDQAVNAFRV------------------------------------ 581
                           D  V AF++                                    
Sbjct: 891  DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 950

Query: 582  --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              M   GLKPS  A N+L+ +F E  +  EA  V + +K  GL PD  T   L+  
Sbjct: 951  DEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 244/538 (45%), Gaps = 36/538 (6%)

Query: 138 SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRL--T 192
           SS+S +D   +V+ W + +    S  +++ ILI +  R   L EA   F +++   +  +
Sbjct: 138 SSSSILD---SVLFWFRNYG--GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILIS 192

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +  N+L+    +   +E    + + M       D   Y+ ++ +L +T  +  +  +++
Sbjct: 193 LIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGA--KRV 250

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E++   +  +  + + VI G  + GD  +A+         GL P T TY  +   L  
Sbjct: 251 LIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCR 310

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           + R  EA+  FEE++++GLKP   A +AL+ G+++ G + +   +   M   G+  +  T
Sbjct: 311 AKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 370

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y++LI      G+ E A  +LK M     KPNS  +  ++ GY       R  ++L EM+
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 430

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              + P    Y  MI+       L  A    ++M   G++P+ + ++ LI  +   GR +
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L + M   G  P    YN +I+ L +  + E+    L  ++ +GL P+ VT+   +
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550

Query: 553 DIYGQSGRFDDAIECLEGLSD------------------------QAVNAFRVMRTDGLK 588
             Y ++G+  +A +  + + D                        +A++ FR +   G+ 
Sbjct: 551 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVL 610

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P     ++ I+   ++ R  EA  V   +KE GL PDV TY++L+    +  +  K F
Sbjct: 611 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 136/343 (39%), Gaps = 78/343 (22%)

Query: 128  LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
            ++++L+  LC S   I  A  +   + +  L     + YS +I    +SE + EAF L  
Sbjct: 685  IYNALVDGLCKS-GDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 186  ---SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY------------HC---- 226
               S+  +     YNAL+  C +  D+EKA+NL  +M Q G+            +C    
Sbjct: 743  EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 802

Query: 227  ------------------DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
                              D + Y+ VI    +  K++ + L  L+KE++   + +D    
Sbjct: 803  IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL--LFKEMQERNLIVDTVTY 860

Query: 269  NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI--------------------- 307
              ++ G+ K G +S+           G+ P   TY  VI                     
Sbjct: 861  TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920

Query: 308  --------------TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
                          TAL       EA  + +E+ E GLKP   A N L++ + + G + +
Sbjct: 921  KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980

Query: 354  AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            A  V   ++  G++PD  T   L++   N    E AR ++K++
Sbjct: 981  ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 237/528 (44%), Gaps = 30/528 (5%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--SQRQRLTPL---TYNALI 200
           A  V +W+++        +  ++++  LGR  +L     L  S R+   PL    Y +LI
Sbjct: 65  ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLI 124

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
           SA +RN   ++AL    +M++ G     + Y+++I    +  +   ++L+ L++E++   
Sbjct: 125 SALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILE-LFEEMKAQG 183

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           I+ D    N  I   A      +A       +    +P   TY A++     +G   EA 
Sbjct: 184 IQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAA 243

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            V +E++ +G  P    YN LL  + + G    A  +   M   G+ PD  TY+ L+ AY
Sbjct: 244 NVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAY 303

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
           + AG+ E A  +  +M  S+  PNSF ++ ++  +     +     + ++M++ GVEPD 
Sbjct: 304 SRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDI 363

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             +N ++  FGK       +  F  M   G EPD  T+N LI+ + +CG  D+A  +++ 
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDG 423

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M + G  P   T+N ++  L  + RWE  + +L  +      PN + Y +++  Y   G 
Sbjct: 424 MLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGE 483

Query: 561 FDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNS 596
            +   E ++                         L D+A +AF  MR  G        N+
Sbjct: 484 LEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNA 543

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +I+ +G+     +A      ++  GL+PDVVTY  LM    R   + K
Sbjct: 544 MISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRK 591



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 239/518 (46%), Gaps = 27/518 (5%)

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQRLTPL- 194
           C+S S  + A  + + ++  N C    + Y+ L+   G++    EA  +L + +    L 
Sbjct: 198 CASGSLCEEATELFTQMKSSN-CTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLP 256

Query: 195 ---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
              TYN L+SA  R      A  +   M   G   D   Y+ ++ + +R  K++ ++  +
Sbjct: 257 NIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAM--E 314

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +Y ++       +    N +I    K  + S+ M      Q  G+ P   T+ +++ A  
Sbjct: 315 IYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFG 374

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +G   E   VF  +K++G +P    +N L++ Y + G    A  +   M ++G  PD  
Sbjct: 375 KNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLA 434

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T++ L+ A A  GRWE A ++L E+  S  KPN   Y+ +L  Y + GE ++    LKEM
Sbjct: 435 TFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEK----LKEM 490

Query: 432 KSSGVEPDTHFYNVMIDTF----GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             +       F  +++ TF     K + +  A  AF  M   G   DT T+N +I  + K
Sbjct: 491 VDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGK 550

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G  D+A + F  ++  G  P   TYN ++ + G +  +   +  L    A G  P++V+
Sbjct: 551 KGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVS 610

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y T++  Y + G+              A   F  M ++G++P +   N+ +  +      
Sbjct: 611 YNTVIFSYSKHGQL-----------SSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMF 659

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            EA +V+++M + G KPD VTY TL+ A  ++ KF +V
Sbjct: 660 PEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEV 697



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 46/380 (12%)

Query: 271 VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++ G  + G  +KA+  F  M Q V   P   T A ++  L    +      +F+ L+E 
Sbjct: 52  IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G      AY +L+    +    K+A     +M+ +G  P   TY+++ID Y   GR    
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGR---- 167

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                                          W+   ++ +EMK+ G++PD + YN  I  
Sbjct: 168 ------------------------------SWENILELFEEMKAQGIQPDEYTYNTAITA 197

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
               +    A   F +M S    PD +T+N L+D + K G Y+ A  + +EM+  G  P 
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +++  G          +  +M ++G+ P+V TYT+L+  Y ++G+ + A+E   
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEI-- 315

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    +  MRT    P++   N+LI   G+++  +E   + + M+  G++PD+VT+
Sbjct: 316 ---------YNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTW 366

Query: 630 TTLMKALIRVDKFHKVFSSY 649
            +L+ A  +   + +V   +
Sbjct: 367 NSLLGAFGKNGMYSEVLKVF 386



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 186/409 (45%), Gaps = 44/409 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+ A  R+ K+ +A  +  + R    TP   T+NALI    +N +  + + +   M+
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQ 355

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + ++ ++ +  + N + S +L K+++ ++    E D    N +I  + + G 
Sbjct: 356 ACGVEPDIVTWNSLLGAFGK-NGMYSEVL-KVFRGMKKAGFEPDKATFNILIEAYGRCGS 413

Query: 281 ASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + +A+  + GM Q  G +P  AT+  ++ AL+  GR   AE + +EL  S  KP   AY 
Sbjct: 414 SDQALSIYDGMLQ-AGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472

Query: 340 ALLKGYVKMGYLK-----------------------------------DAEFVVSEMERS 364
           ++L  Y   G L+                                   +AE     M   
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G L D  T++ +I  Y   G  + A      +  +  +P+   Y+ ++  Y   G +++ 
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKC 592

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
              L+E  ++G  PD   YN +I ++ K+  L  A   F  M+S GI+PD+ T+NT + C
Sbjct: 593 EATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGC 652

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +   G +  A  + + M + G  P   TY  +++   +  ++E+V+R+L
Sbjct: 653 YVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/402 (20%), Positives = 164/402 (40%), Gaps = 43/402 (10%)

Query: 138 SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP- 193
           S    ++ A  + + ++  N C      ++ LI   G+++   E  ++    Q   + P 
Sbjct: 304 SRAGKVEQAMEIYNQMRTSN-CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPD 362

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +T+N+L+ A  +N    + L +   M++ G+  D   ++++I++  R    D +L   +
Sbjct: 363 IVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL--SI 420

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           Y  +       D    N ++   A+ G    A   L         P    YA+++ A +N
Sbjct: 421 YDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYAN 480

Query: 313 SG------------RTI-----------------------EAEAVFEELKESGLKPRTKA 337
            G             TI                       EAE  F  ++  G    T  
Sbjct: 481 GGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTST 540

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +NA++  Y K G +  A    + +  +G+ PD  TY+ L+  Y   G +      L+E  
Sbjct: 541 FNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECM 600

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P+   Y+ ++  Y   G+     ++  EM S+G++PD+  YN  +  +       
Sbjct: 601 AAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFP 660

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            A++    M   G +PD +T+ TL+D + K G+++  E + +
Sbjct: 661 EALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 44/310 (14%)

Query: 166 YSILIHALGR------SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ILI A GR      +  +Y+  L   +   TP   T+N L++A AR    E A  ++ 
Sbjct: 401 FNILIEAYGRCGSSDQALSIYDGML---QAGCTPDLATFNTLLAALAREGRWEHAELILD 457

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKID----------------SSLLQKLYKEI--ECD 259
           ++ +  Y  + I Y+ ++ +     +++                + +L K +  +  +C 
Sbjct: 458 ELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCS 517

Query: 260 KIE---------------LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
            ++                D    N +I  + K G   KA     + +  GL P   TY 
Sbjct: 518 LVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYN 577

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++      G   + EA   E   +G  P   +YN ++  Y K G L  A  +  EM  +
Sbjct: 578 CLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSN 637

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD  TY+  +  Y N G +  A  V+K M  +  KP+   Y  ++  Y   G+++  
Sbjct: 638 GIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEV 697

Query: 425 FQVLKEMKSS 434
            ++LK +KSS
Sbjct: 698 ERILKFIKSS 707



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 13/263 (4%)

Query: 163 ELLYSILIHAL---GRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALN 214
           ++ Y+ ++HA    G  EKL E       +     ++   T+  + S C+  D+ E A  
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAF- 526

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
               MR  GY  D   ++ +I    +   +D +     +  +    +E D    N ++  
Sbjct: 527 --LAMRHHGYLSDTSTFNAMISMYGKKGMMDKA--TDTFALLRSTGLEPDVVTYNCLMGM 582

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           + + G   K    L      G +P   +Y  VI + S  G+   A  +F E+  +G++P 
Sbjct: 583 YGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPD 642

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
           +  YN  +  YV  G   +A  VV  M ++G  PDE TY  L+DAY   G++E    +LK
Sbjct: 643 SFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702

Query: 395 EMEVSHAKPNSFIYSRILAGYRD 417
            ++ S    +   Y RI A   D
Sbjct: 703 FIKSSDPNFSKAAYRRIAARVDD 725


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 239/501 (47%), Gaps = 32/501 (6%)

Query: 168 ILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           I +  LGR      + KL +   L Q   L    Y  ++ A +R    EKA++L  +M++
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPL-QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKE 238

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     + Y++++    +  +    +L  L  E+    ++ D    + V+   A+ G  
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLL 297

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A  F    +  G  P T TY A++     +G   EA +V +E++E+     +  YN L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  YV+ G+ K+A  V+  M + GV+P+  TY+ +IDAY  AG+ + A  +   M+ +  
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN+  Y+ +L+    +       ++L +MKS+G  P+   +N M+   G          
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M S G EPD  T+NTLI  + +CG    A +++ EM   G+  C TTYN ++N L 
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG------RFDDAIE--------- 566
            +  W   + ++ +M+++G  P   +Y+ ++  Y + G      R ++ I+         
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597

Query: 567 -----CLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                 L     +A+     AF + +  G KP  +  NS+++ F  +    +A  +L+ +
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657

Query: 618 KENGLKPDVVTYTTLMKALIR 638
           +E+GL PD+VTY +LM   +R
Sbjct: 658 REDGLSPDLVTYNSLMDMYVR 678



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 226/522 (43%), Gaps = 56/522 (10%)

Query: 166 YSILIHALGRSEKLYEAFL------LSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y++++   G+  + +   L       S+  +    T + ++SACAR   L +A    +++
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  GY    + Y+ ++Q   +      +L   + KE+E +    D    N+++  + +AG
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEAL--SVLKEMEENSCPADSVTYNELVAAYVRAG 365

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
            + +A   + M    G+ P   TY  VI A   +G+  EA  +F  +KE+G  P T  YN
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425

Query: 340 ALL---------KGYVKM--------------------------GYLKDAEFVVSEMERS 364
           A+L            +KM                          G  K    V  EM+  
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD  T++ LI AY   G    A  +  EM  +        Y+ +L     +G+W+  
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNTLID 483
             V+ +MKS G +P    Y++M+  + K    +  +   +  + EG I P  +   TL+ 
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGN-YLGIERIENRIKEGQIFPSWMLLRTLLL 604

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            +FKC     +E  F   ++ GY P    +N M+++      ++  + +L ++R  GL P
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTY +L+D+Y + G      EC      +A    + +    LKP  ++ N++I  F  
Sbjct: 665 DLVTYNSLMDMYVRRG------ECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
                EA  +L  M E G++P + TY T +     +  F ++
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/482 (23%), Positives = 210/482 (43%), Gaps = 18/482 (3%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA   L    +   P   +TYN L++A  R    ++A  ++  M 
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + I Y+ VI +  +  K D +L  KL+  ++      +    N V+    K   
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEAL--KLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +++ ++ L   +  G SP  AT+  ++    N G       VF E+K  G +P    +N 
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   DA  +  EM R+G      TY+ L++A A  G W S   V+ +M+   
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP    YS +L  Y   G +    ++   +K   + P       ++    K   L  + 
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF      G +PD + +N+++    +   YD+AE + E ++E G  P   TYN ++++ 
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY 676

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             +      + +L  +    L P++V+Y T++  +           C  GL  +AV    
Sbjct: 677 VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF-----------CRRGLMQEAVRMLS 725

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G++P     N+ ++ +      AE   V++ M +N  +P+ +T+  ++    R  
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785

Query: 641 KF 642
           K+
Sbjct: 786 KY 787



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 56/351 (15%)

Query: 340 ALLKGYVKMGYLKDAEFVVSEM---ERSGVLP-DEHTYSLLIDAYANAGRWESARIVLKE 395
           +L+KG    G+ + A F+   +     SG L  D     + +       ++  A  +L +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN- 454
           + +     +   Y+ IL  Y   G++++   + + MK  G  P    YNV++D FGK   
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                +   D M S+G++ D  T +T++    + G    A+E F E++  GY P T TYN
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320

Query: 515 IMINLLGEQERWEDVKRLLGNM--------------------RA---------------Q 539
            ++ + G+   + +   +L  M                    RA               +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G++PN +TYTT++D YG++G+            D+A+  F  M+  G  P+    N++++
Sbjct: 381 GVMPNAITYTTVIDAYGKAGK-----------EDEALKLFYSMKEAGCVPNTCTYNAVLS 429

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKF-HKVF 646
             G+  R  E   +L  MK NG  P+  T+ T++ AL     +DKF ++VF
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVF 479



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYNAL++A AR  D     N++S M+  G+     +YSL++Q   +        ++++  
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG--IERIEN 585

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+  +I     LL  +++   K                               AL+ S 
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKC-----------------------------RALAGS- 615

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                E  F   K+ G KP    +N++L  + +      AE ++  +   G+ PD  TY+
Sbjct: 616 -----ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+D Y   G    A  +LK +E S  KP+   Y+ ++ G+  RG  Q   ++L EM   
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P    YN  +  +             + M      P+ +T+  ++D + + G+Y  A
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790

Query: 495 EELFEEMQERGYFPC 509
            +   +++   + PC
Sbjct: 791 MDFVSKIKT--FDPC 803



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 49/241 (20%)

Query: 411 ILAGYRDRGEWQRT---FQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++ G  D G W+R    F+ L    +SG ++ D     + +   G+ +    A    D++
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKI 201

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +    D   + T++  + + G+Y++A +LFE M+E                       
Sbjct: 202 PLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKE----------------------- 238

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
                        G  P +VTY  ++D++G+ GR   +   + G+ D+       MR+ G
Sbjct: 239 ------------MGPSPTLVTYNVILDVFGKMGR---SWRKILGVLDE-------MRSKG 276

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           LK      +++++A   +    EA      +K  G +P  VTY  L++   +   + +  
Sbjct: 277 LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336

Query: 647 S 647
           S
Sbjct: 337 S 337


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 242/513 (47%), Gaps = 54/513 (10%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           H +GR+ +L +     +++ L P  ++Y A+I+      DL  A  L+ KM   G   + 
Sbjct: 328 HNMGRALELLDEM---EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 384

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + YS +I       +I+ +  ++L   + C  +  D    N +I   +KAG   +A  +L
Sbjct: 385 VVYSTLIMGYASEGRIEEA--RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              QG GL P   T+ A I   S +G+  EA   F+E+ + GL P    Y  L+ G+ K 
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L +A  +   +   GVLPD  T S  I      GR + A  V  E++     P+ F Y
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S +++G+  +GE ++ F++  EM   G+ P+   YN ++D   K   +  A   FD M  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 469 EGIEPDTITWNTLIDCHFK--------------------------------C---GRYDR 493
           +G+EPD++T++T+ID + K                                C   G  ++
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF EM ++G F  T ++N +I+   +  + ++  +L   M A+ ++P+ VTYTT++D
Sbjct: 683 AMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + ++G+            ++A   F+ M+   L    +   SL+  + +  + +E FA+
Sbjct: 742 WHCKAGKM-----------EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + M   G+KPD VTY  ++ A  + D   + F
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 823



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 228/489 (46%), Gaps = 18/489 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNA---LISACARNDDLEKALNLMSKMR 220
           Y+I+   L R++++ EA L  +  + T L   YNA   LI    R  D+++ L +   M 
Sbjct: 212 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 271

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y+++I  L +  K++ +   ++ K +     + + +    +I G+ +  +
Sbjct: 272 SCGIPINLITYNVLIHGLCKFGKMEKA--AEILKGMITLGCKPNSRTFCLLIEGYCREHN 329

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +   L P   +Y A+I  L +      A  + E++  SGLKP    Y+ 
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +++A  ++  M  SGV PD   Y+ +I   + AG+ E A   L E++   
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP++  +   + GY   G+     +   EM   G+ P+   Y V+I+   K   L  A+
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F  + + G+ PD  T +  I    K GR   A ++F E++E+G  P   TY+ +I+  
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +Q   E    L   M  +G+ PN+  Y  LVD   +SG    A +  +G+ ++      
Sbjct: 570 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK------ 623

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                GL+P ++  +++I+ + + +  AEAF++   M   G++P    Y  L+    +  
Sbjct: 624 -----GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 641 KFHKVFSSY 649
              K  + +
Sbjct: 679 DMEKAMNLF 687



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 229/536 (42%), Gaps = 67/536 (12%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSK 218
           ++YS LI       ++ EA  L      + +      YNA+IS  ++   +E+A   + +
Sbjct: 385 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 444

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           ++  G   D + +   I   ++T K+  +   K + E+    +  +  L   +I G  KA
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEA--AKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+  +A+        +G+ P   T +A I  L  +GR  EA  VF ELKE GL P    Y
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+ G+ K G ++ A  +  EM   G+ P+   Y+ L+D    +G  + AR +   M  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P+S  YS ++ GY         F +  EM S GV+P +  YN ++    K   +  
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F  ML +G    T+++NTLID + K  +   A +LF+EM  +   P   TY  +I+
Sbjct: 683 AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------- 571
              +  + E+   L   M+ + L+ + VTYT+L+  Y + G+  +     E +       
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801

Query: 572 --------------SDQAVNAFRV------------------------------------ 581
                          D  V AF++                                    
Sbjct: 802 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 861

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             M   GLKPS  A ++L+ +F E  +  EA  V + +K  GL PD  T   L+  
Sbjct: 862 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 174/376 (46%), Gaps = 24/376 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P T TY  +   L  + R  EA+  FEE++++GLKP   A +AL+ G+++ G + + 
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M   G+  +  TY++LI      G+ E A  +LK M     KPNS  +  ++ G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y       R  ++L EM+   + P    Y  MI+       L  A    ++M   G++P+
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + ++TLI  +   GR + A  L + M   G  P    YN +I+ L +  + E+    L 
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--------------------- 573
            ++ +GL P+ VT+   +  Y ++G+  +A +  + + D                     
Sbjct: 444 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 503

Query: 574 ---QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
              +A++ FR +   G+ P     ++ I+   ++ R  EA  V   +KE GL PDV TY+
Sbjct: 504 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 563

Query: 631 TLMKALIRVDKFHKVF 646
           +L+    +  +  K F
Sbjct: 564 SLISGFCKQGEVEKAF 579



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 29/311 (9%)

Query: 337 AYNALLKGYVKMGYLKDAE--FVVSE----------------MERSGVLPDEHTYSLLID 378
            ++ L+  Y +MG L +A   F V++                M   G++P+ +TY+++  
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITA 217

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
               A R   A++  +EM+ +  KP+    S ++ G+   G+     ++   M S G+  
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   YNV+I    K+  +  A      M++ G +P++ T+  LI+ + +     RA EL 
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +EM++R   P   +Y  MIN L   +      +LL  M   GL PNVV Y+TL+  Y   
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           GR ++A   L+G+S             G+ P     N++I+   +  +  EA   L  ++
Sbjct: 398 GRIEEARRLLDGMS-----------CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 619 ENGLKPDVVTY 629
             GLKPD VT+
Sbjct: 447 GRGLKPDAVTF 457



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 136/343 (39%), Gaps = 78/343 (22%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           ++++L+  LC S   I  A  +   + +  L     + YS +I    +SE + EAF L  
Sbjct: 596 IYNALVDGLCKS-GDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 186 ---SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY------------HC---- 226
              S+  +     YNAL+  C +  D+EKA+NL  +M Q G+            +C    
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 713

Query: 227 ------------------DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
                             D + Y+ VI    +  K++ + L  L+KE++   + +D    
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL--LFKEMQERNLIVDTVTY 771

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI--------------------- 307
             ++ G+ K G +S+           G+ P   TY  VI                     
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831

Query: 308 --------------TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
                         TAL       EA  + +E+ E GLKP   A + L++ + + G + +
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           A  V   ++  G++PD  T   L++   N    E AR ++K++
Sbjct: 892 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 235/506 (46%), Gaps = 31/506 (6%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
           YS  I A G + +   A   L S   R TP   LTY++ I+ACA+    ++A+ L+  M+
Sbjct: 189 YSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMK 248

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I YS  I +  +  + ++++   L KE+    +  D    + VI   AK G 
Sbjct: 249 GQGVKPNVIVYSAAISACRKGGQWETAV--DLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A R L      G+     TY+ VI A +  G+  EA A+  E++E+G+ P    Y++
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +    K G  ++A  ++ EM   GV P+  +Y ++I A A  GRW  A  +L+EM+   
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS  +        W++   +L+EM ++G+ P+   YN  ID   K      A+
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M + G+ PD IT++ +I       +++ A +LF EMQ +G  P   + N  IN  
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINAC 546

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------ 568
            +   WE+   +LG M   GL+P+ ++Y T +D   +  R+ + I+ L            
Sbjct: 547 AQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDA 606

Query: 569 ------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                       +GL  +A+   R M   GL P  +  NS INA  +  R  EA  +L+ 
Sbjct: 607 ISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQ 666

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M   GL PDV ++   + A    D++
Sbjct: 667 MPTFGLAPDVNSFNAAIDACGNGDQW 692



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 215/484 (44%), Gaps = 62/484 (12%)

Query: 188 RQRLTPLTY-NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           RQ   P+++  A +    +  D  KAL+++ +M++ G   D  NYS  I +     + + 
Sbjct: 145 RQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWER 204

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++                 +LL            AS A R        G  P   TY++ 
Sbjct: 205 AV-----------------ELL------------ASMAAR--------GTPPDVLTYSSA 227

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I A +   R  EA  +   +K  G+KP    Y+A +    K G  + A  ++ EM   G+
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TYS +IDA A  G+WE A  +L EM       N   YS ++      G+W+    
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L+EM+ +GV PD   Y+  I    K      A+     M  EG+ P+ I++  +I    
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K GR+  A +L +EMQ  G  P    Y+  I+   +  RWE    LL  M A GL PNV+
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVI 467

Query: 547 TYTTLVDIYGQSGRFDDAIECLE-----GLS-------------------DQAVNAFRVM 582
           +Y + +D   ++GR   A+E L      GL+                   ++A++ FR M
Sbjct: 468 SYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +  G+ P  ++ N+ INA  +     EA  VL  M   GL PD ++Y T + A  + D++
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 643 HKVF 646
            ++ 
Sbjct: 588 KEII 591



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 229/515 (44%), Gaps = 53/515 (10%)

Query: 164 LLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L YS  I A  +  +  EA  L    + Q + P  + Y+A ISAC +    E A++L+ +
Sbjct: 222 LTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKE 281

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I YS VI +  +  + + +   +L  E+    +  +    + VI   AK 
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAF--RLLMEMPTKGVVANIITYSIVIGACAKW 339

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A+  L   Q  G++P   TY++ I+A +  G+  EA  +  E+   G+ P   +Y
Sbjct: 340 GQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISY 399

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             ++    K G  ++A  ++ EM+  GV PD   YS  IDA A A RWE A  +L+EM  
Sbjct: 400 GIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPA 459

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   PN   Y+  +      G  +   ++L+EM + G+ PD   Y+ +I +         
Sbjct: 460 TGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEE 519

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  F  M  +GI PD ++ NT I+   + G ++ A ++  EM   G  P   +Y   I+
Sbjct: 520 ALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID 579

Query: 519 LLGEQERWEDVKRLLG-----------------------------------NMRAQGLLP 543
              + +RW+++  LL                                    +M A GL P
Sbjct: 580 ACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSP 639

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +VVTY + ++   + GR+ +A   L           R M T GL P   + N+ I+A G 
Sbjct: 640 DVVTYNSAINACAKGGRWKEATVLL-----------RQMPTFGLAPDVNSFNAAIDACGN 688

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +   A  VL  M+  G+ P+  TY T M A  R
Sbjct: 689 GDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKR 723



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 189/408 (46%), Gaps = 7/408 (1%)

Query: 164 LLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YSI+I A  +  +  EA  L    Q   + P  +TY++ ISACA+    E+A+ L+ +
Sbjct: 327 ITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLRE 386

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +G   + I+Y +VI +  +  +   ++   L +E++   +  D    +  I   A+A
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAI--DLLQEMQAHGVPPDVINYSAAIDACAQA 444

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+  L      GL+P   +Y + I A + +GR+  A  +  E+   GL P    Y
Sbjct: 445 SRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITY 504

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           +A++         ++A  +  EM+R G+ PD  + +  I+A A  G WE A  VL EM  
Sbjct: 505 SAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPT 564

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P++  Y   +        W+    +L+EM + G+ PD   Y   +           
Sbjct: 565 MGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKE 624

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+     ML+ G+ PD +T+N+ I+   K GR+  A  L  +M   G  P   ++N  I+
Sbjct: 625 ALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAID 684

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
             G  ++W     +L  MRA G+ PN  TY T +    + G  DD ++
Sbjct: 685 ACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 229/525 (43%), Gaps = 36/525 (6%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEK 211
           NLC      YSILI    R   L   F     +L    R+  +  N L+        + +
Sbjct: 89  NLC-----TYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGE 143

Query: 212 ALN-LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLN 269
           A++ L+ +M + G   D ++Y+++++ L    + + +L L  +  +    +   +    +
Sbjct: 144 AMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYS 203

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            VI GF   G   K           G+ P   TY  VI  L  +     AE VF+++ ++
Sbjct: 204 IVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN 263

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP    YN L+ GY+ +G  K+   ++ EM   G+ PD +TY  L++     GR   A
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           R     M     KP    Y  ++ GY  +G        L  M  +G+ PD H +N+    
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  AM  F++M   G+ P+ + +  LID   K GR D AE  F +M   G  P 
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT----------------LVD 553
              +N ++  L   ++WE  + L+  M  QG+ PN V + T                L+D
Sbjct: 444 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 503

Query: 554 IYGQSGRFDDAIE--------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +    G   DA          CL G +D+A   F  M + GL P+ +  N+L++ +    
Sbjct: 504 LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 563

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           R  +A+ + + M   G+ P VVTY T++  L +  +F +    YL
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 608



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 219/478 (45%), Gaps = 22/478 (4%)

Query: 166 YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH   ++G+ +++ +       + L P   TY +L++   +N    +A      M 
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y ++I        + S +   L   +E + +  D  + N     +AK G 
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGAL-SEMHSFLDLMVE-NGLSPDHHIFNIFFSAYAKCGM 389

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KAM      +  GLSP    Y A+I AL   GR  +AE  F ++   G+ P    +N+
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G   +   + AE +V EM   G+ P+   ++ LI    N GR    R ++  ME   
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P++F Y+ +++GY   G      +V   M S G+ P    YN ++  +   + +  A 
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  ML +G+ P  +T+NT++   F+  R+  A+EL+  M   G      TYNI++N L
Sbjct: 570 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 629

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +    ++  ++  ++ ++GL  N++T+T ++    + GR +DA++            F 
Sbjct: 630 CKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD-----------LFA 678

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  +GL P+ +    +     E+    E  ++   M++NG  P+    + ++ AL+R
Sbjct: 679 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN----SQMLNALVR 732



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 174/424 (41%), Gaps = 72/424 (16%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTI---EAEAVFEELKESGLKPRTKAYNALLKGYV 346
           M++ VG +P        I A     R++   +A  +F+EL         +A+N LL    
Sbjct: 1   MSRRVGAAPARCLELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVS 60

Query: 347 KMGYLKDAEFVVSEMER------SGVLPDEHTYSLLIDAYANAGR--------------- 385
           +      +E  VS   R        V P+  TYS+LI  +   G                
Sbjct: 61  RARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTG 120

Query: 386 W---------------------ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           W                     E+  ++L+ M      P++  Y+ +L G  +    +  
Sbjct: 121 WRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEA 180

Query: 425 FQVLKEM---KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            ++L  M         P+   Y+++I+ F     +      F  M+  GI PD +T+ T+
Sbjct: 181 LELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTV 240

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K   +DRAE +F++M + G+ P   TYN +I+      +W++V ++L  M A+GL
Sbjct: 241 IDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGL 300

Query: 542 LPNVVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEGLSDQAVN 577
            P+  TY +L++   ++GR       FD  I                    +G   +  +
Sbjct: 301 KPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHS 360

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
              +M  +GL P +   N   +A+ +     +A  +   M+++GL P+VV Y  L+ AL 
Sbjct: 361 FLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALC 420

Query: 638 RVDK 641
           ++ +
Sbjct: 421 KLGR 424



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/395 (19%), Positives = 165/395 (41%), Gaps = 8/395 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           ID A  + + +++H L  +  + Y  LI AL   GR +     F     + +TP  + +N
Sbjct: 390 IDKAMDIFNKMRQHGLSPNV-VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           +L+      D  E+A  L+ +M   G   + + ++ +I +L    ++     ++L   +E
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG--RRLIDLME 506

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      +I G+   G   +A +       +GLSP   TY  ++    ++ R  
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F E+   G+ P    YN +L G  +     +A+ +   M  SG   D +TY++++
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 626

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +    +   + A  + + +     + N   ++ ++      G  +    +   + ++G+ 
Sbjct: 627 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 686

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y ++ +   +   L    + F  M   G  P++   N L+      G   RA   
Sbjct: 687 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 746

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
             ++ ER +    +T ++++++    E     K L
Sbjct: 747 LSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 261/554 (47%), Gaps = 38/554 (6%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++LL  LC  +    +++L + +     + N+     + ++ L++ L R  ++ EA  L
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV-----VTFTTLMNGLCREGRIVEAVAL 206

Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLT 239
             R      + T +TY  ++    +  D   ALNL+ KM +  +   + + YS +I SL 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  +   S  Q L+ E++   I  D    N +IVGF  +G  S A + L       +SP 
Sbjct: 267 KDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A+I A    G+  EAE +++E+   G+ P T  Y++++ G+ K   L  AE +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  P+  T++ LID Y  A R +    +L EM  +    ++  Y+ ++ G+   G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS----------- 468
           +      +L+EM SSG+ PD    + ++D       L  A+  F  M             
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+EPD  T+N LI      G++  AEEL+EEM  RG  P T TY+ MI+ L +Q R ++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++  +M ++   PNVVT+TTL++ Y ++GR DD +E            F  M   G+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE-----------LFCEMGRRGIV 613

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            + +   +LI  F +      A  + Q M  +G+ PD +T   ++  L   ++  +  + 
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 649 YLFFNIYKMLSYSG 662
                +   LS+ G
Sbjct: 674 LEKLQMSMDLSFGG 687



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 38/470 (8%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE A++L S M +       +++  ++  + R  + D  L+  LY+++E  +I  D    
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD--LVISLYQKMERKQIRCDIYSF 117

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I  F        A+   G    +GL P   T+  ++  L    R  EA  +F ++ E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P    +  L+ G  + G + +A  ++  M   G+ P + TY  ++D     G   S
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 389 ARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  +L++M EVSH  PN  IYS I+      G       +  EM+  G+ PD   YN MI
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F        A      ML   I PD +T+N LI+   K G++  AEEL++EM  RG  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T TY+ MI+   +Q R +  + +   M  +G  PN++T+ TL+D Y  + R DD +E 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 568 LEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           L  +++                         A++  + M + GL P  +  ++L++   +
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 604 DQ--RDA-EAFAVLQYMKE--------NGLKPDVVTYTTLMKALIRVDKF 642
           +   +DA E F V+Q  K+        NG++PDV TY  L+  LI   KF
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 193/444 (43%), Gaps = 24/444 (5%)

Query: 108 SSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S+LN +  K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y
Sbjct: 237 SALNLLR-KMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTY 293

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + +I     S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I YS +I    + N++D++  + ++  +       +    N +I G+  A   
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAA--EHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              M  L      GL   T TY  +I      G    A  + +E+  SGL P     + L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 342 LKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESAR 390
           L G    G LKDA  +   M++S           GV PD  TY++LI    N G++  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P++  YS ++ G   +       Q+   M S    P+   +  +I+ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPC 509
            K   +   +  F  M   GI  + IT+ TLI C F K G  + A ++F+EM   G +P 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLI-CGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 510 TTTYNIMINLLGEQERWEDVKRLL 533
           T T   M+  L  +E  +    +L
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAML 674



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 12/303 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +N ++      + +  A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            ++        LL  M     ++PNVV Y+ ++D   + GR  D           A N F
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-----------AQNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKF 642
            KF
Sbjct: 339 GKF 341


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 239/499 (47%), Gaps = 23/499 (4%)

Query: 145 LAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNA 198
           LA A   W       +S+    ++ L+  L R +K  EA  L + + L        +YN 
Sbjct: 58  LALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNI 117

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +IS      DL  AL L+ +M+  G+  D   ++ +I ++     +D ++     + + C
Sbjct: 118 VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH--LRSMGC 175

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
           D    +      +I  FA+A    +AM+ L   +  G  P   TY  ++ AL        
Sbjct: 176 DP---NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 232

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A+ V +++ E G  P    +N+L+ G+ K G + DA  ++  M   G+ P+  TYS LID
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
               + ++  A+ VL+EM+     P++F YS ++ G     + +   Q+L+ M  SG  P
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   Y+ +I  F K   L  A      M  +   PD +T+NT+ID   K G+   A+ + 
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412

Query: 499 EEMQERG-YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           E+MQE G   P   TY+ +IN L + +   + ++LL  M   G  P+VVTYTT++D   +
Sbjct: 413 EQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 472

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR ++A   L+G           M+  G  P+ +   +LI+   + ++  EA  V++ M
Sbjct: 473 CGRLEEAEYLLQG-----------MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521

Query: 618 KENGLKPDVVTYTTLMKAL 636
           +  G  P++VTY T++  L
Sbjct: 522 RNAGCPPNLVTYNTMVNGL 540



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 218/459 (47%), Gaps = 20/459 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  ++N+L+    R     +A +L           D  +Y++VI        + ++L  +
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAAL--E 133

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +E++      D      +I   A AGD   AM  L   + +G  P   TY A+I A +
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL---RSMGCDPNVVTYTALIAAFA 190

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + +  EA  + EE++E G  P    YN L+    K+  +  A+ VV +M   G  P+  
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T++ L+D +   G  + AR +L  M     +PN   YS ++ G     ++    +VL+EM
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K+ GV PD   Y+ +I    K + +  A     RM   G  PD + ++++I    K G+ 
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG-LLPNVVTYTT 550
             A++  +EM+++   P   TYN +I+ L +  +  + + +L  M+  G +LP+VVTY+T
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           +++   +S    +A    + L D+   A       G  P  +   ++I+   +  R  EA
Sbjct: 431 VINGLCKSDMLVEA----QKLLDRMCKA-------GCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
             +LQ MK  G  P+VVTYTTL+  L    +VD+  +V 
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 518



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 15/383 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N VI GF  AGD   A+  L   +  G +P   T+  +ITA++N+G   + +   + L+ 
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRS 172

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P    Y AL+  + +   L++A  ++ EM   G  P+  TY++L+DA        +
Sbjct: 173 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 232

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A+ V+K+M      PN   ++ ++ G+  RG      ++L  M + G+ P+   Y+ +ID
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K      A    + M + G+ PD  T++ LI    K  + + AE++   M   G  P
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               Y+ +I+   +  +  + ++ L  MR Q   P+VVTY T++D   + G+  +A   L
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 412

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E + +          +  + P  +  +++IN   +     EA  +L  M + G  PDVVT
Sbjct: 413 EQMQE----------SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT 462

Query: 629 YTTLMKALIRVDKFHKVFSSYLF 651
           YTT++  L +  +  +  + YL 
Sbjct: 463 YTTIIDGLCKCGRLEE--AEYLL 483



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 156/324 (48%), Gaps = 5/324 (1%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             ++++  R   +TY+ALI    ++    +A  ++ +M+  G   D   YS +I  L + 
Sbjct: 273 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKA 332

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +KI+ +  +++ + +       D  + + +I  F K+G   +A + L   +    SP   
Sbjct: 333 DKIEEA--EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 390

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           TY  VI  L   G+  EA+ + E+++ESG + P    Y+ ++ G  K   L +A+ ++  
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M ++G  PD  TY+ +ID     GR E A  +L+ M+ +   PN   Y+ +++G     +
Sbjct: 451 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 510

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITW 478
                +V++EM+++G  P+   YN M++       +  A     RM     E  PD  T+
Sbjct: 511 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQ 502
            T+++          AE+L E+M+
Sbjct: 571 RTIVNALMSSDLVQEAEQLLEQMK 594



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 97/208 (46%), Gaps = 10/208 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++  LC     I  A  ++  +Q+        + YS +I+ L +S+ L EA  L  R
Sbjct: 392 YNTVIDGLCKLGK-IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                  P  +TY  +I    +   LE+A  L+  M++ G   + + Y+ +I  L +  K
Sbjct: 451 MCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARK 510

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVG-LSPKTA 301
           +D +  +++ +E+       +    N ++ G   +G   +A + +  M  G    SP  A
Sbjct: 511 VDEA--ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAA 568

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKES 329
           TY  ++ AL +S    EAE + E++K +
Sbjct: 569 TYRTIVNALMSSDLVQEAEQLLEQMKST 596


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 261/554 (47%), Gaps = 38/554 (6%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++LL  LC  +    +++L + +     + N+     + ++ L++ L R  ++ EA  L
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV-----VTFTTLMNGLCREGRIVEAVAL 206

Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLT 239
             R      + T +TY  ++    +  D   ALNL+ KM +  +   + + YS +I SL 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  +   S  Q L+ E++   I  D    N +IVGF  +G  S A + L       +SP 
Sbjct: 267 KDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A+I A    G+  EAE +++E+   G+ P T  Y++++ G+ K   L  AE +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  P+  T++ LID Y  A R +    +L EM  +    ++  Y+ ++ G+   G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS----------- 468
           +      +L+EM SSG+ PD    + ++D       L  A+  F  M             
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+EPD  T+N LI      G++  AEEL+EEM  RG  P T TY+ MI+ L +Q R ++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++  +M ++   PNVVT+TTL++ Y ++GR DD +E            F  M   G+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE-----------LFCEMGRRGIV 613

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            + +   +LI  F +      A  + Q M  +G+ PD +T   ++  L   ++  +  + 
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 649 YLFFNIYKMLSYSG 662
                +   LS+ G
Sbjct: 674 LEKLQMSMDLSFGG 687



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 38/470 (8%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE A++L S M +       +++  ++  + R  + D  L+  LY+++E  +I  D    
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD--LVISLYQKMERKQIRCDIYSF 117

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I  F        A+   G    +GL P   T+  ++  L    R  EA  +F ++ E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P    +  L+ G  + G + +A  ++  M   G+ P + TY  ++D     G   S
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 389 ARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  +L++M EVSH  PN  IYS I+      G       +  EM+  G+ PD   YN MI
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F        A      ML   I PD +T+N LI+   K G++  AEEL++EM  RG  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T TY+ MI+   +Q R +  + +   M  +G  PN++T+ TL+D Y  + R DD +E 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 568 LEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           L  +++                         A++  + M + GL P  +  ++L++   +
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 604 DQ--RDA-EAFAVLQYMKE--------NGLKPDVVTYTTLMKALIRVDKF 642
           +   +DA E F V+Q  K+        NG++PDV TY  L+  LI   KF
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 193/444 (43%), Gaps = 24/444 (5%)

Query: 108 SSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S+LN +  K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y
Sbjct: 237 SALNLLR-KMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTY 293

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + +I     S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I YS +I    + N++D++  + ++  +       +    N +I G+  A   
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAA--EHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              M  L      GL   T TY  +I      G    A  + +E+  SGL P     + L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 342 LKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESAR 390
           L G    G LKDA  +   M++S           GV PD  TY++LI    N G++  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P++  YS ++ G   +       Q+   M S    P+   +  +I+ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPC 509
            K   +   +  F  M   GI  + IT+ TLI C F K G  + A ++F+EM   G +P 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLI-CGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 510 TTTYNIMINLLGEQERWEDVKRLL 533
           T T   M+  L  +E  +    +L
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAML 674



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 12/303 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +N ++      + +  A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            ++        LL  M     ++PNVV Y+ ++D   + GR  D           A N F
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-----------AQNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKF 642
            KF
Sbjct: 339 GKF 341


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 234/516 (45%), Gaps = 31/516 (6%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           YSILI    R   L   F     +L    R+  +  N L++       + +A++ L+ +M
Sbjct: 97  YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM 156

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   D ++Y+++++ L    + + +L L  +  + +      +    + VI GF   
Sbjct: 157 PELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTE 216

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   K           G+ P   TY  VI  L  +     AEAVF+++ ++G+KP    Y
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY+ +G  K+   ++ EM   G  P+  TY  L++     GR   AR     M  
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIG 336

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+   Y  +L GY  +G       +L  M ++G+ P+ H +N+    + K   +  
Sbjct: 337 KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDK 396

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F++M  +G+ PD +++  LID   K GR D AE  F +M   G  P    ++ ++ 
Sbjct: 397 AMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVY 456

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG------RFDDAIE------ 566
            L   ++WE V+ L   M   G+ PN+V + T++    + G      R  D+IE      
Sbjct: 457 GLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       CL G  D+A      M + GLKP + + N+L++ + +  R   A++  
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHF 576

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           + M  NG+ P VVTY T++  L +  +F +    YL
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 226/507 (44%), Gaps = 24/507 (4%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y I++H     G   ++++   L     ++P    +N   SA A+   ++KA+++ +KMR
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMR 405

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D ++Y  +I +L +  ++D + ++  + ++  + +  D  + + ++ G      
Sbjct: 406 QQGLSPDAVSYGALIDALCKLGRVDDAEVK--FNQMINEGVTPDIVVFSSLVYGLCTVDK 463

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             K          VG+ P    +  ++  L   GR +E + + + ++  G++P   +YN 
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+   G + +A  ++  M   G+ PD  +Y+ L+  Y  AGR +SA    ++M  + 
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P    Y+ IL G      +    ++   M +SG + D + YN++++   K NC+  A+
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  + S+G++ + IT+N +I    K GR + A +LF  +   G      TY +++  L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ--AVNA 578
            E+   E+   L   M   G  PN      LV      G    A   L  L ++  +V A
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763

Query: 579 ------FRVMRTDGLKPSNLALNSLINAFGEDQRDA---------EAFAVLQYMKENGLK 623
                   +  +D  +    +L        E    A         +A+++ + M   GL 
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYL 650
           PDVVTY T++  L +  +F +    YL
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYL 850



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/571 (22%), Positives = 240/571 (42%), Gaps = 94/571 (16%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLL------SQRQRLTP--LTYNALISACARNDDLE 210
           C    + Y+IL+  L   ++  EA  L       Q     P  ++Y+ +I+       ++
Sbjct: 161 CMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVD 220

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           K  NL  +M   G   D + Y+ VI  L +    D +  + +++++  + ++ +    N 
Sbjct: 221 KPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRA--EAVFQQMIDNGVKPNIDTYNC 278

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G+   G   + +R L      G  P   TY +++  L  +GR  EA   F+ +   G
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG 338

Query: 331 LKPRTKAYNALLKGYV-----------------------------------KMGYLKDAE 355
           +KP    Y  +L GY                                    K G +  A 
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAM 398

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            + ++M + G+ PD  +Y  LIDA    GR + A +   +M      P+  ++S ++ G 
Sbjct: 399 DIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGL 458

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK----------------------- 452
               +W++  ++  EM + G+ P+  F+N ++    K                       
Sbjct: 459 CTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDV 518

Query: 453 --YNCL--HHAMAA--------FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YN L   H +A          + M+S G++PD+ ++NTL+  + K GR D A   F +
Sbjct: 519 ISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRK 578

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M   G  P   TYN +++ L + +R+ + K L  NM   G   ++ TY  +++       
Sbjct: 579 MLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGL----- 633

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                 C     D+A+  F+ + + GL+ + +  N +I A  +  R  +A  +   +  N
Sbjct: 634 ------CKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687

Query: 621 GLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
           GL  +VVTY  +++ LI    +++F  +FS+
Sbjct: 688 GLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/541 (21%), Positives = 221/541 (40%), Gaps = 62/541 (11%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI AL   GR +     F     + +TP  + +++L+      D  EK   L  +M 
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G H + + ++ ++ +L +  ++     Q+L   IEC  +  D    N +I G   AG 
Sbjct: 476 NVGIHPNIVFFNTILCNLCKEGRVMEG--QRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A + L     VGL P + +Y  ++     +GR   A + F ++  +G+ P    YN 
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G  +     +A+ +   M  SG   D +TY+++++    +   + A  + + +    
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N   ++ ++      G  +    +   + ++G+  +   Y ++++   +   L    
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F  M   G  P++   N L+      G   RA     ++ ER +    +T +++I++ 
Sbjct: 714 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773

Query: 521 GEQE----------------------------RWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              E                            R +D   L   M  +GL P+VVTY T++
Sbjct: 774 SSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 833

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
               Q+GRF +A E                        C     D+A   F+ + + GL+
Sbjct: 834 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 893

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKV 645
            + +  N +I A  +  R  +A  +   +  NGL PDVVTY  + + LI    +++F  +
Sbjct: 894 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGL 953

Query: 646 F 646
           F
Sbjct: 954 F 954



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/483 (21%), Positives = 204/483 (42%), Gaps = 25/483 (5%)

Query: 166  YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+H     GR +  Y  F       +TP  +TYN ++    +     +A  L   M 
Sbjct: 556  YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
              G   D   Y++++  L ++N +D ++  K+++ +    ++L+    N +I    K G 
Sbjct: 616  NSGTKWDIYTYNIILNGLCKSNCVDEAI--KMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
               AM         GL     TY  V+  L   G   E +++F  ++++G  P ++  NA
Sbjct: 674  KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L++  +  G +  A   +S+++      +  T S+LI  +++      A+ + K+  + +
Sbjct: 734  LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
               +S       A  +        + + +EM   G+ PD   YN ++    +      A 
Sbjct: 794  EANSS-------ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              +  M++   + +  T+N +++   K    D A ++F+ +  +G      T+NIMI  L
Sbjct: 847  ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             +  R ED   L   + A GL+P+VVTY  + +   + G    ++E  +GL       F 
Sbjct: 907  LKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEG----SLEEFDGL-------FL 955

Query: 581  VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
             M   G    +  LN+L+    +    + A A L  + E     +  T + L+    R +
Sbjct: 956  TMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGE 1015

Query: 641  KFH 643
              H
Sbjct: 1016 YQH 1018



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 15/214 (7%)

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V P+   Y+++I  F +   L H  AAF  +L  G   D I  N L++      R   A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 496 E-LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM---RAQGLLPNVVTYTTL 551
           + L + M E G  P T +YNI++  L  ++R E+   LL  M   +     PNVV+Y+T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++     G F       EG  D+  N F  M   G+ P  +   ++I+   + Q    A 
Sbjct: 210 IN-----GFFT------EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAE 258

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           AV Q M +NG+KP++ TY  L+   + + K+ +V
Sbjct: 259 AVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEV 292



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/400 (19%), Positives = 163/400 (40%), Gaps = 35/400 (8%)

Query: 166  YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
            Y+I+++ L +S  + EA      L S+  +L  +T+N +I A  +    E A++L + + 
Sbjct: 626  YNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 685

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             +G   + + Y LV+++L     ++      L+  +E +    + Q+LN ++      GD
Sbjct: 686  ANGLVQNVVTYRLVVENLIEEGSLEE--FDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 743

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVIT---------------------------ALSNS 313
             S+A  +L        S + +T + +I+                           AL   
Sbjct: 744  ISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKK 803

Query: 314  GRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             R I+ A ++F E+   GL P    YN +L G  + G   +A+ +   M  S    + +T
Sbjct: 804  ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 863

Query: 373  YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            Y+++++    +   + A  + + +     + N   ++ ++      G  +    +   + 
Sbjct: 864  YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923

Query: 433  SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            ++G+ PD   Y ++ +   +   L      F  M   G   D+   N L+    + G   
Sbjct: 924  ANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDIS 983

Query: 493  RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            RA     ++ E+ +    +T + +I+L    E     K L
Sbjct: 984  RAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 245/521 (47%), Gaps = 30/521 (5%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKAL 213
           C    + ++ L++ L R  ++ EA  L  R      + T +TY  ++    +  D   AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 214 NLMSKMRQDGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           NL+ KM +  +   + + YS +I SL +  +   S  Q L+ E++   I  D    N +I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           VGF  +G  S A + L       +SP   TY A+I A    G+  EAE +++E+   G+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P T  Y++++ G+ K   L  AE +   M   G  P+  T++ LID Y  A R +    +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L EM  +    ++  Y+ ++ G+   G+      +L+EM SSG+ PD    + ++D    
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 453 YNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
              L  A+  F  M              G+EPD  T+N LI      G++  AEEL+EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
             RG  P T TY+ MI+ L +Q R ++  ++  +M ++   PNVVT+TTL++ Y ++GR 
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           DD +E            F  M   G+  + +   +LI  F +      A  + Q M  +G
Sbjct: 598 DDGLE-----------LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           + PD +T   ++  L   ++  +  +      +   LS+ G
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 217/470 (46%), Gaps = 38/470 (8%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE A++L S M +       +++  ++  + R  + D  L+  LY+++E  +I  D    
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD--LVISLYQKMERKQIRCDIYSF 117

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F        A+   G    +GL P   T+  ++  L    R  EA  +F ++ E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P    +  L+ G  + G + +A  ++  M   G+ P + TY  ++D     G   S
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 389 ARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  +L++M EVSH  PN  IYS I+      G       +  EM+  G+ PD   YN MI
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F        A      ML   I PD +T+N LI+   K G++  AEEL++EM  RG  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T TY+ MI+   +Q R +  + +   M  +G  PN++T+ TL+D Y  + R DD +E 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 568 LEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           L  +++                         A++  + M + GL P  +  ++L++   +
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 604 DQ--RDA-EAFAVLQYMKE--------NGLKPDVVTYTTLMKALIRVDKF 642
           +   +DA E F V+Q  K+        NG++PDV TY  L+  LI   KF
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 22/391 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQ 187
           ++S++   CSS    D    +   L++     S +++ Y+ LI+A  +  K +EA  L  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 188 R---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
               + + P  +TY+++I    + + L+ A ++   M   G   + I ++ +I       
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +ID  +  +L  E+    +  D    N +I GF   GD + A+  L      GL P   T
Sbjct: 410 RIDDGM--ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 303 YAAVITALSNSGRTIEAEAVFEELKES-----------GLKPRTKAYNALLKGYVKMGYL 351
              ++  L ++G+  +A  +F+ +++S           G++P  + YN L+ G +  G  
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +AE +  EM   G++PD  TYS +ID      R + A  +   M      PN   ++ +
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G      ++  EM   G+  +   Y  +I  F K   ++ A+  F  M+S G+
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            PDTIT   ++   +      RA  + E++Q
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 193/444 (43%), Gaps = 24/444 (5%)

Query: 108 SSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S+LN +  K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y
Sbjct: 237 SALNLLR-KMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTY 293

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + +I     S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I YS +I    + N++D++  + ++  +       +    N +I G+  A   
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAA--EHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              M  L      GL   T TY  +I      G    A  + +E+  SGL P     + L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 342 LKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESAR 390
           L G    G LKDA  +   M++S           GV PD  TY++LI    N G++  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P++  YS ++ G   +       Q+   M S    P+   +  +I+ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPC 509
            K   +   +  F  M   GI  + IT+ TLI C F K G  + A ++F+EM   G +P 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLI-CGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 510 TTTYNIMINLLGEQERWEDVKRLL 533
           T T   M+  L  +E  +    +L
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAML 674



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 12/303 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +  ++      + +  A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            ++        LL  M     ++PNVV Y+ ++D   + GR  D           A N F
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-----------AQNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKF 642
            KF
Sbjct: 339 GKF 341



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 134/320 (41%), Gaps = 16/320 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++   C  N  +D A  +  +L     C    + ++ LI     ++++ +   L   
Sbjct: 363 YSSMIDGFCKQNR-LDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              T L     TYN LI       DL  AL+L+ +M   G   D +    ++  L    K
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 244 IDSSL-----LQKLYKEIEC----DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +  +L     +QK  K+++     + +E D Q  N +I G    G   +A          
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P T TY+++I  L    R  EA  +F+ +      P    +  L+ GY K G + D 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM R G++ +  TY  LI  +   G    A  + +EM  S   P++     +L G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 415 YRDRGEWQRTFQVLKEMKSS 434
              + E +R   +L++++ S
Sbjct: 661 LWSKEELKRAVAMLEKLQMS 680


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 245/525 (46%), Gaps = 26/525 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 178

Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            L       R   +P   ++Y  +I+   +  D +KA +   +M   G   D + Y+ +I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  D    N ++ G+  +G   +A+ FL   + 
Sbjct: 239 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY+ ++  L  +GR +EA  +F+ + + GLKP    Y  LL+GY   G L +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD + +S+LI AYAN G+ + A +V  +M      PN+  Y  ++ 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +      ++M   G+ P    YN +I      N    A      ML  GI  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +TI +N++ID H K GR   +E+LFE M   G  P   TYN +IN      + ++  +LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M + GL PN VTY+TL++ Y +  R +DA+             F+ M + G+ P  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALV-----------LFKEMESSGVSPDIIT 583

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 223/485 (45%), Gaps = 18/485 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNL-MSKM 219
           Y ILI    R+ +L   F     ++ +  R+  + +  L+     +     A+++ + +M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   +  +Y+++++ L   N+   +L L  +  +        D      VI GF K 
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD+ KA          G+ P   TY ++I AL  +    +A  V   + ++G+ P    Y
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N++L GY   G  K+A   + +M   GV PD  TYSLL+D     GR   AR +   M  
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP    Y  +L GY  +G       +L  M  +G+ PD + ++++I  +     +  
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQ 389

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F +M  +G+ P+ +T+  +I    K GR + A   FE+M + G  P    YN +I+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    +WE  + L+  M  +G+  N + + +++D +           C EG   ++   
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEGRVIESEKL 498

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F +M   G+KP+ +  N+LIN +    +  EA  +L  M   GLKP+ VTY+TL+    +
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 639 VDKFH 643
           + +  
Sbjct: 559 ISRME 563



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 209/463 (45%), Gaps = 49/463 (10%)

Query: 166 YSILIHALGRSE---KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I AL +++   K  E      +  + P  +TYN+++     +   ++A+  + KMR
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293

Query: 221 QDGYHCDFINYSLVIQSLTRTNK-------IDSSLLQKLYKEIEC--------------- 258
            DG   D + YSL++  L +  +        DS   + L  EI                 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 259 -----------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                      + I  D  + + +I  +A  G   +AM      +  GL+P   TY AVI
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L  SGR  +A   FE++ + GL P    YN+L+ G       + AE ++ EM   G+ 
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            +   ++ +ID++   GR   +  + + M     KPN   Y+ ++ GY   G+     ++
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L  M S G++P+T  Y+ +I+ + K + +  A+  F  M S G+ PD IT+N ++   F+
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             R   A+EL+  + E G     +TYNI+++ L + +  +D  ++  N+    L     T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +  ++D   + GR           +D+A + F    ++GL P+
Sbjct: 654 FNIMIDALLKVGR-----------NDEAKDLFVAFSSNGLVPN 685



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 6/348 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ LI A A    +++A+ + SKMRQ G + + + Y  VI  L ++ +++ ++L   Y 
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML---YF 429

Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E   D+    G ++ N +I G        +A   +      G+   T  + ++I +    
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR IE+E +FE +   G+KP    YN L+ GY   G + +A  ++S M   G+ P+  TY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI+ Y    R E A ++ KEME S   P+   Y+ IL G           ++   +  
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG + +   YN+++    K      A+  F  +    ++ +  T+N +ID   K GR D 
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
           A++LF      G  P   TY +M  N++G Q   E++ +L  +M   G
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 716



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 174/407 (42%), Gaps = 30/407 (7%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVG--LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           LN  +   A+   A+   R+  MA+     ++P   TY  +I     +GR     A    
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           + + G +    A+  LLKG        DA + V+  M   G +P+  +Y++L+    +  
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDEN 172

Query: 385 RWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           R + A  +L  M       + P+   Y+ ++ G+   G+  + +    EM   G+ PD  
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +I    K   +  AM   + M+  G+ PD +T+N+++  +   G+   A    ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G  P   TY+++++ L +  R  + +++  +M  +GL P + TY TL+  Y   G  
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +    L                        +G  DQA+  F  MR  GL P+ +   ++
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           I    +  R  +A    + M + GL P  + Y +L+  L   +K+ +
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 15/335 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
           +++SL+  LC+ N   + A  ++  +    +C +     SI+      GR   SEKL+E 
Sbjct: 443 VYNSLIHGLCTCNKW-ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE- 500

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             L  R  + P  +TYN LI+       +++A+ L+S M   G   + + YS +I    +
Sbjct: 501 --LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            ++++ +L+  L+KE+E   +  D    N ++ G  +    + A          G   + 
Sbjct: 559 ISRMEDALV--LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY  ++  L  +  T +A  +F+ L    LK   + +N ++   +K+G   +A+ +   
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
              +G++P+  TY L+ +     G  E    +   ME +    +S + + I+     RGE
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 421 WQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             R  T+  + + K   +E  T    + + + GKY
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + + +T L+       R  DA++ 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M   G  P+  + N L+    ++ R  EA  +L  M ++   G  P
Sbjct: 145 V----------LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+YTT++    +     K +S+Y
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTY 219


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 245/521 (47%), Gaps = 30/521 (5%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKAL 213
           C    + ++ L++ L R  ++ EA  L  R      + T +TY  ++    +  D   AL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 214 NLMSKMRQDGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           NL+ KM +  +   + + YS +I SL +  +   S  Q L+ E++   I  D    N +I
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           VGF  +G  S A + L       +SP   TY A+I A    G+  EAE +++E+   G+ 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P T  Y++++ G+ K   L  AE +   M   G  P+  T++ LID Y  A R +    +
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L EM  +    ++  Y+ ++ G+   G+      +L+EM SSG+ PD    + ++D    
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 453 YNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
              L  A+  F  M              G+EPD  T+N LI      G++  AEEL+EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
             RG  P T TY+ MI+ L +Q R ++  ++  +M ++   PNVVT+TTL++ Y ++GR 
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           DD +E            F  M   G+  + +   +LI  F +      A  + Q M  +G
Sbjct: 598 DDGLE-----------LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           + PD +T   ++  L   ++  +  +      +   LS+ G
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 38/470 (8%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE A++L S M +       +++  ++  + R  + D  L+  LY+++E  +I  D    
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD--LVISLYQKMERKQIRCDIYSF 117

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F        A+   G    +GL P   T+  ++  L    R  EA   F ++ E
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P    +  L+ G  + G + +A  ++  M   G+ P + TY  ++D     G   S
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 389 ARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  +L++M EVSH  PN  IYS I+      G       +  EM+  G+ PD   YN MI
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F        A      ML   I PD +T+N LI+   K G++  AEEL++EM  RG  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T TY+ MI+   +Q R +  + +   M  +G  PN++T+ TL+D Y  + R DD +E 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 568 LEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           L  +++                         A++  + M + GL P  +  ++L++   +
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 604 DQ--RDA-EAFAVLQYMKE--------NGLKPDVVTYTTLMKALIRVDKF 642
           +   +DA E F V+Q  K+        NG++PDV TY  L+  LI   KF
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 22/391 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQ 187
           ++S++   CSS    D    +   L++     S +++ Y+ LI+A  +  K +EA  L  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 188 R---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
               + + P  +TY+++I    + + L+ A ++   M   G   + I ++ +I       
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAK 409

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +ID  +  +L  E+    +  D    N +I GF   GD + A+  L      GL P   T
Sbjct: 410 RIDDGM--ELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 303 YAAVITALSNSGRTIEAEAVFEELKES-----------GLKPRTKAYNALLKGYVKMGYL 351
              ++  L ++G+  +A  +F+ +++S           G++P  + YN L+ G +  G  
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +AE +  EM   G++PD  TYS +ID      R + A  +   M      PN   ++ +
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTL 587

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G      ++  EM   G+  +   Y  +I  F K   ++ A+  F  M+S G+
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            PDTIT   ++   +      RA  + E++Q
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 193/444 (43%), Gaps = 24/444 (5%)

Query: 108 SSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S+LN +  K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y
Sbjct: 237 SALNLLR-KMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTY 293

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + +I     S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I YS +I    + N++D++  + ++  +       +    N +I G+  A   
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAA--EHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              M  L      GL   T TY  +I      G    A  + +E+  SGL P     + L
Sbjct: 412 DDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTL 471

Query: 342 LKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESAR 390
           L G    G LKDA  +   M++S           GV PD  TY++LI    N G++  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 531

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P++  YS ++ G   +       Q+   M S    P+   +  +I+ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPC 509
            K   +   +  F  M   GI  + IT+ TLI C F K G  + A ++F+EM   G +P 
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLI-CGFRKVGNINGALDIFQEMISSGVYPD 650

Query: 510 TTTYNIMINLLGEQERWEDVKRLL 533
           T T   M+  L  +E  +    +L
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAML 674



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 133/303 (43%), Gaps = 12/303 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +  ++      + +  A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            ++        LL  M     ++PNVV Y+ ++D   + GR  D           A N F
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-----------AQNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKF 642
            KF
Sbjct: 339 GKF 341



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 134/320 (41%), Gaps = 16/320 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++   C  N  +D A  +  +L     C    + ++ LI     ++++ +   L   
Sbjct: 363 YSSMIDGFCKQNR-LDAAEHMF-YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              T L     TYN LI       DL  AL+L+ +M   G   D +    ++  L    K
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 244 IDSSL-----LQKLYKEIEC----DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +  +L     +QK  K+++     + +E D Q  N +I G    G   +A          
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P T TY+++I  L    R  EA  +F+ +      P    +  L+ GY K G + D 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM R G++ +  TY  LI  +   G    A  + +EM  S   P++     +L G
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 415 YRDRGEWQRTFQVLKEMKSS 434
              + E +R   +L++++ S
Sbjct: 661 LWSKEELKRAVAMLEKLQMS 680


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 167/662 (25%), Positives = 300/662 (45%), Gaps = 75/662 (11%)

Query: 18  SACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTEEEEEDDDDVLSL 77
           S+ PIT H +   P  S         +  S   +  S S        +E++ DD      
Sbjct: 56  SSVPITTHTLTLVPP-SHDNTKDFNNSVHSKHPTLGSGSII------DEDKFDDAK---- 104

Query: 78  QKQRYDFTPLLNFLSENSNSESASALASSPSSLN----RVEFKLAESYRAVPAPLWHSLL 133
                       FLS+      +S + S    LN     V+F+L E+        + SLL
Sbjct: 105 ----------FGFLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEAD-------FPSLL 147

Query: 134 KNL-CSSNSSIDLAYAVVSWLQ---KHNLCYSYELLYSILIHALGR------SEKLYEAF 183
           K L  S N    L      WL      NL    +++  +++  LGR      + KL++  
Sbjct: 148 KALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSIASKLFD-L 205

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  ++  L    Y  ++ + AR    ++A++L  KM++ G     + Y++++    +  +
Sbjct: 206 IPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGR 265

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
               +L+ L  E+    +ELD    + VI    + G   +A +FL   +  G  P T TY
Sbjct: 266 SWDRILE-LLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTY 324

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++     +G   EA ++ +E++++   P +  YN L   YV+ G+L +   V+  M  
Sbjct: 325 NSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTS 384

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV+P+  TY+ +IDAY  AGR + A  +   M+     PN + Y+ +LA    +   + 
Sbjct: 385 KGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTED 444

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +VL EMK +G  P+   +N M+      GK+N ++  +     M + G EPD  T+NT
Sbjct: 445 VIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR---EMKNCGFEPDKDTFNT 501

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI  + +CG    + +++ EM + G+ PC TTYN ++N L  +  W+  + ++ +MR +G
Sbjct: 502 LISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKG 561

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV------------------------ 576
             PN  +Y+ L+  Y ++G      +  + + D  V                        
Sbjct: 562 FKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGME 621

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            AF  ++  G KP  + +NS+++ F  ++  ++A  +L ++ E GL+P++ TY  LM   
Sbjct: 622 RAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLY 681

Query: 637 IR 638
           +R
Sbjct: 682 VR 683



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 209/453 (46%), Gaps = 17/453 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKL 252
           +TYN L +   R   L++ + ++  M   G   + I Y+ VI +  +  + D +L L  L
Sbjct: 357 VTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSL 416

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            K++ C     +    N V+    K       ++ L   +  G +P  AT+  ++   S 
Sbjct: 417 MKDLGCAP---NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSE 473

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G+      V  E+K  G +P    +N L+  Y + G   D+  +  EM +SG  P   T
Sbjct: 474 EGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTT 533

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L++A A  G W++A  V+++M     KPN   YS +L  Y   G  +   +V KE+ 
Sbjct: 534 YNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIY 593

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P       ++ T  K   L     AFD++   G +PD +  N+++    +   + 
Sbjct: 594 DGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFS 653

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINL-LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +A E+   + E G  P   TYN +++L + E E W+  + +L  ++  G  P+VV+Y T+
Sbjct: 654 KAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWK-AEEVLKGIQNSGPEPDVVSYNTV 712

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  +           C +GL  +A+     M T G++P+ +  N+ ++ +   +   EA 
Sbjct: 713 IKGF-----------CRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 761

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            V+++M E+  +P  +TY  L+    +  K+ +
Sbjct: 762 EVIRFMIEHNCRPSELTYKILVDGYCKAGKYEE 794



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 180/408 (44%), Gaps = 37/408 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  +I A  +    + AL L S M+  G   +   Y+ V+  L + ++ +  +  K+ 
Sbjct: 392 ITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVI--KVL 449

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++ +    +    N ++   ++ G  +   + L   +  G  P   T+  +I+A +  
Sbjct: 450 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARC 509

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  +++  ++ E+ +SG  P    YNALL    + G  K AE V+ +M   G  P+E++Y
Sbjct: 510 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSY 569

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHA-------------------------------- 401
           SLL+  Y+ AG  +    V KE+   H                                 
Sbjct: 570 SLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQK 629

Query: 402 ---KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  + + +L+ +     + +  ++L  +   G++P+   YN ++D + +      
Sbjct: 630 YGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWK 689

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      + + G EPD +++NT+I    + G    A  +  EM  +G  P   TYN  ++
Sbjct: 690 AEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLS 749

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                E +++   ++  M      P+ +TY  LVD Y ++G++++A++
Sbjct: 750 GYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMD 797



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 42/414 (10%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ +I A G++ +  +A   F L +     P   TYN++++   +    E  + ++ +
Sbjct: 392 ITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCE 451

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+ +G   +   ++ ++   +   K   + + K+ +E++    E D    N +I  +A+ 
Sbjct: 452 MKLNGCAPNRATWNTMLAVCSEEGK--HNYVNKVLREMKNCGFEPDKDTFNTLISAYARC 509

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    + +  G     G +P   TY A++ AL+  G    AE+V ++++  G KP   +Y
Sbjct: 510 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSY 569

Query: 339 NALLKGYVKMGYLKDAEFVVSE----------------------------MERS------ 364
           + LL  Y K G +K  E V  E                            MER+      
Sbjct: 570 SLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQK 629

Query: 365 -GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD    + ++  +A    +  AR +L  +     +PN F Y+ ++  Y   GE  +
Sbjct: 630 YGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWK 689

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +VLK +++SG EPD   YN +I  F +   +  A+     M ++GI+P  +T+NT + 
Sbjct: 690 AEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLS 749

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            +     +D A E+   M E    P   TY I+++   +  ++E+    +  ++
Sbjct: 750 GYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIK 803



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 145/346 (41%), Gaps = 48/346 (13%)

Query: 166 YSILIHALGR------SEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMS 217
           ++ LI A  R      S K+Y   +   +   TP   TYNAL++A AR  D + A +++ 
Sbjct: 499 FNTLISAYARCGSEVDSAKMYGEMV---KSGFTPCVTTYNALLNALARRGDWKAAESVIQ 555

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            MR  G+  +  +YSL++   ++   +    ++K+ KEI       DG +    I+    
Sbjct: 556 DMRTKGFKPNENSYSLLLHCYSKAGNVKG--IEKVEKEI------YDGHVFPSWILLRTL 607

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                K     GM                             E  F++L++ G KP    
Sbjct: 608 VLTNHKCRHLRGM-----------------------------ERAFDQLQKYGYKPDLVV 638

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            N++L  + +      A  ++  +   G+ P+  TY+ L+D Y   G    A  VLK ++
Sbjct: 639 INSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQ 698

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            S  +P+   Y+ ++ G+  +G  Q    VL EM + G++P    YN  +  +       
Sbjct: 699 NSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFD 758

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            A      M+     P  +T+  L+D + K G+Y+ A +   +++E
Sbjct: 759 EANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 44/246 (17%)

Query: 161 SYELLYSILI--HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLM 216
           S+ LL ++++  H       +  AF   Q+    P  +  N+++S  ARN    KA  ++
Sbjct: 600 SWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREML 659

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
             + + G   +   Y+ ++    R  +   +  +++ K I+    E D    N VI GF 
Sbjct: 660 HFIHECGLQPNLFTYNCLMDLYVREGECWKA--EEVLKGIQNSGPEPDVVSYNTVIKGFC 717

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G          M + +G+  +  T                           G++P   
Sbjct: 718 RKG---------LMQEAIGVLSEMTT--------------------------KGIQPTIV 742

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV---L 393
            YN  L GY  M    +A  V+  M      P E TY +L+D Y  AG++E A      +
Sbjct: 743 TYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKI 802

Query: 394 KEMEVS 399
           KE+++S
Sbjct: 803 KELDIS 808


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 230/484 (47%), Gaps = 18/484 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  +     L   +P  +TYN+LISA AR+  L++A+ L +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    R  K++S++   +++E+     + +    N  I  +  
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAM--NIFEEMRNAGCKPNICTFNAFIKMYGN 431

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G     M+        GLSP   T+  ++     +G   E   VF+E+K +G  P  + 
Sbjct: 432 RGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G  + A  V   M  +GV PD  TY+ ++ A A  G WE +  VL EME
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   Y  +L  Y +  E      + +E+ S  +EP       ++    K + L 
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  AF  +   G  PD  T N+++  + +     +A E+ + M+ERG+ P   TYN ++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLM 671

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +      +   + +L  + A+G+ P++++Y T++  Y ++ R  D           A  
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD-----------ASR 720

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  MR  G+ P  +  N+ I ++  D    EA  V++YM ++G +P+  TY +++    
Sbjct: 721 IFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780

Query: 638 RVDK 641
           ++++
Sbjct: 781 KLNR 784



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 237/537 (44%), Gaps = 40/537 (7%)

Query: 143 IDLAYAVVSWLQKHNLCYSY--ELLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLT 195
            DLA     W  K     S     + +I+I  LG+  ++  A  L +  Q     L   +
Sbjct: 151 FDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYS 210

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL----TRTNKIDSSLLQK 251
           Y +LISA A +    +A+N+  KM ++G     I Y++++       T  NKI S     
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITS----- 265

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L ++++ D I  D    N +I    +     +A +     +  G S    TY A++    
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYG 325

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            S R  EA  V  E++ +G  P    YN+L+  Y + G L +A  + ++M   G  PD  
Sbjct: 326 KSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L+  +  AG+ ESA  + +EM  +  KPN   ++  +  Y +RG++    ++  E+
Sbjct: 386 TYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEI 445

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ PD   +N ++  FG+          F  M   G  P+  T+NTLI  + +CG +
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           ++A  ++  M + G  P  +TYN ++  L     WE  +++L  M      PN +TY +L
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565

Query: 552 VDIYGQ---------------SGRFDDAIECLEGLS---------DQAVNAFRVMRTDGL 587
           +  Y                 SG  +     L+ L           +A  AF  ++  G 
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            P    LNS+++ +G  Q   +A  VL YMKE G  P + TY +LM    R   F K
Sbjct: 626 SPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 162/347 (46%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A VI+ L   GR   A  +F  L+E G      +Y +L+  +   G  ++A  V  +ME 
Sbjct: 177 AIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ +   G  W     ++++M+     P+++ Y+ ++   +     Q
Sbjct: 237 EGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              QV +EMK++G   D   YN ++D +GK +    AM   + M   G  P  +T+N+LI
Sbjct: 297 EAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLI 356

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  D A EL  +M E+G  P   TY  +++      + E    +   MR  G  
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCK 416

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+   + +YG  G+F D ++            F  +   GL P  +  N+L+  FG
Sbjct: 417 PNICTFNAFIKMYGNRGKFVDMMKI-----------FDEINVCGLSPDIVTWNTLLAVFG 465

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ A  R   F +  + Y
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 18/235 (7%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           ++  G   D + Y  +I  F        A+  F +M  EG +P  IT+N +++   K G 
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGT 258

Query: 491 -YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +++   L E+M+  G  P   TYN +I         ++  ++   M+A G   + VTY 
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYN 318

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+D+YG+S R  +A++ L             M  +G  PS +  NSLI+A+  D    E
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNE-----------MELNGFSPSIVTYNSLISAYARDGMLDE 367

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
           A  +   M E G KPDV TYTTL+    R  K           NI++ +  +G K
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA------MNIFEEMRNAGCK 416



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/446 (21%), Positives = 175/446 (39%), Gaps = 75/446 (16%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A  R   L EA  L  +      +    TY  L+S   R   +E A+N+  +MR
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR 411

Query: 221 QDGYHCDFINYSLVIQ----------------------------------SLTRTNKIDS 246
             G   +   ++  I+                                  ++   N +DS
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            +   ++KE++      + +  N +I  +++ G   +AM         G++P  +TY  V
Sbjct: 472 EV-SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV-------------------- 346
           + AL+  G   ++E V  E+++   KP    Y +LL  Y                     
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590

Query: 347 ---------------KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
                          K   L +AE   SE++  G  PD  T + ++  Y        A  
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANE 650

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           VL  M+     P+   Y+ ++  +    ++ ++ ++L+E+ + G++PD   YN +I  + 
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +   +  A   F  M   GI PD IT+NT I  +     ++ A  +   M + G  P   
Sbjct: 711 RNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMR 537
           TYN +++   +  R ++ K  + ++R
Sbjct: 771 TYNSIVDGYCKLNRKDEAKLFVEDLR 796


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 238/486 (48%), Gaps = 20/486 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQ----RQRLTP--LTYNALISACARNDDLEKALNLM 216
           + Y+  I A  +  +  EA  LL+Q     + +TP  +TYN+ I+AC+     ++A++L+
Sbjct: 146 VTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLL 205

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            +M   G   + I Y+  I +  +  + + ++   L +E+         +  N VI   A
Sbjct: 206 EQMVAQGVPPNLITYNSAIGACAKGRRWEEAM--DLLEEVIEQGFPPSTRTYNPVIDACA 263

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K G   +AM  LG      +     +Y++VI A     R  EA  + E+++  G+ P   
Sbjct: 264 KGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVI 323

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +YN+ +    K    K+A  ++ EM   G++P   +Y+    A A  GRW  A  +LKEM
Sbjct: 324 SYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEM 383

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 PN+  Y+  L      G+W++  ++L+ M + G +PD   +N  ID  G+    
Sbjct: 384 PAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQW 443

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+     M + G+ P+ IT+N+ I+   +  R+  A  LF EM  RG  P   TYN M
Sbjct: 444 ETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSM 503

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+   + E+WE   +LL  M A+G+ P+V++Y + ++  G+  +++ A++ L+G      
Sbjct: 504 IDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKG------ 557

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M T G KP  ++ NS + A  +  R  EA  +L+ M   GL P+ V+Y   + A 
Sbjct: 558 -----MPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHAC 612

Query: 637 IRVDKF 642
            + +++
Sbjct: 613 GKGEQW 618



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 18/480 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+  I A  +  +  EA  L +    Q   P   TYN +I ACA+     +A++L+ +
Sbjct: 218 ITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQ 277

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +    D I+YS VI +  R  +   ++   L +++    +  +    N  I   AK 
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAM--DLLEQMRTQGVSPNVISYNSAIDACAKG 335

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+  L     VGL P   +Y +   A + +GR +EA  + +E+   G+ P T +Y
Sbjct: 336 DRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISY 395

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+ L    K G  + A  ++  M   G  PD  +++  IDA     +WE+A  +L+EM  
Sbjct: 396 NSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPT 455

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   PN   Y+  +        WQ    + +EM + G+ P+   YN MID   K      
Sbjct: 456 AGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWEL 515

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+     M + G+ PD I++N+ I+   K  +++ A +L + M  RG  P   +YN  + 
Sbjct: 516 AVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVT 575

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  RW +   LL +M   GL PN V+Y   +   G+  ++D A+  L          
Sbjct: 576 ACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRIL---------- 625

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+T G  P+ +  ++ I+A  +  R  EA  +L  ++  GL PD  TY T++ A  R
Sbjct: 626 -KEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 225/524 (42%), Gaps = 55/524 (10%)

Query: 165 LYSILIHALGRSEKLYEA----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           L SIL+ A GR  +   A    F +S    L   +YN  I+AC+       A+ L+ +M 
Sbjct: 79  LKSILLEAKGRDWRTALAALDEFKISGGS-LDTTSYNIAIAACSNGRQWATAVRLLREMP 137

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +G   D + Y+  I + ++  +   +  LL ++    E   I  D    N  I   +  
Sbjct: 138 TEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTE--GITPDVVTYNSAIAACSNG 195

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +AM  L      G+ P   TY + I A +   R  EA  + EE+ E G  P T+ Y
Sbjct: 196 GRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTY 255

Query: 339 NALLKGYVKMGYL-----------------------------------KDAEFVVSEMER 363
           N ++    K G                                     K+A  ++ +M  
Sbjct: 256 NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRT 315

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P+  +Y+  IDA A   RW+ A  +L+EM      P    Y+   A     G W  
Sbjct: 316 QGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVE 375

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LKEM + G+ P+T  YN  +D   K      A+     M + G +PD I++N+ ID
Sbjct: 376 ALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAID 435

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              +  +++ A EL  EM   G  P   TYN  I   G   RW++   L   M  +GL P
Sbjct: 436 ACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSP 495

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTY +++D   +  +++ A++ L G           M   G+ P  ++ NS I A G+
Sbjct: 496 NVVTYNSMIDACAKGEQWELAVQLLTG-----------MPARGVAPDVISYNSAIEACGK 544

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            ++   A  +L+ M   G KPD+++Y + + A  +  ++ +   
Sbjct: 545 GEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALG 588



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 157/398 (39%), Gaps = 77/398 (19%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I A GR  +  EA  LL Q   Q ++P  ++YN+ I ACA+ D  ++AL+L+ +M 
Sbjct: 290 YSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMT 349

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     I+Y+    +     +   +L  +L KE+    I  +    N  +   AK G 
Sbjct: 350 TVGLVPTVISYNSATAACAVNGRWVEAL--ELLKEMPAQGIAPNTISYNSALDACAKGGQ 407

Query: 281 ASKAMRFL-GMAQ----------------------------------GVGLSPKTATYAA 305
             KA++ L GM+                                     GL+P   TY +
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
            I A   S R  EA  +F E+   GL P    YN+++    K    + A  +++ M   G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527

Query: 366 VLPDEHTYSLLIDAY-----------------------------------ANAGRWESAR 390
           V PD  +Y+  I+A                                    A +GRW  A 
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +LK+M      PN+  Y   +       +W    ++LKEM++ G  P+   Y+  ID  
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDAC 647

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            K      A+     +  +G+ PD  T+ T+I    +C
Sbjct: 648 AKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRC 685


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 44/495 (8%)

Query: 166  YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            ++  I+ L +   +  A  +  R     L P  +T+N LI+   +  + E+A  L  +M 
Sbjct: 535  FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL--------LNDVI 272
                  D + +  +I  L +  +++++           D ++L G L         N ++
Sbjct: 595  AKNLQPDVMTFGALIDGLCKAGQVEAAR----------DILDLMGNLGVPPNVVTYNALV 644

Query: 273  VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             G  K+G   +A +FL      G  P + TY +++ AL  + RT +A  +  ELK  G  
Sbjct: 645  HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704

Query: 333  PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
            P T  YN L+ G  K G  + A  V+ EM   G  PD  TY+ LID+   AG  E AR +
Sbjct: 705  PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764

Query: 393  LKEMEVSHAK---PNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVEPDTHFYNVMI 447
              +M    ++   PN   YS ++ G    G      ++++EM  KS  V P+   YN  +
Sbjct: 765  HGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFL 824

Query: 448  DTFGKYNCLHHAMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            D   K + +  A     R L +G   + PDT+T++TLID   KCG+ D A  +F++M   
Sbjct: 825  DGLCKQSMMAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG 883

Query: 505  GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            GY P   TYN+++N L + ++ E    ++ +M  +G+ P+V+TY+ LVD + ++   D+A
Sbjct: 884  GYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEA 943

Query: 565  IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK-ENGLK 623
            +E L G++ +           G  P+ +  NS+I+   +  +  EAF +   M  ++GL 
Sbjct: 944  LELLHGMASR-----------GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLA 992

Query: 624  PDVVTYTTLMKALIR 638
            PD +TY TL+  L R
Sbjct: 993  PDKITYCTLIDGLFR 1007



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 253/547 (46%), Gaps = 45/547 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           +++L+  LC ++  ++ A+A++  +    +     + YS+L+ A  ++ ++ EA  L   
Sbjct: 398 YNALVNGLCKADK-MERAHAMIESMVDKGVTPDV-ITYSVLVDAFCKASRVDEALELLHG 455

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMR-QDGYHCDFINYSLVIQSLTRTN 242
              +  TP  +T+N++I    ++D   +A  +   M  + G   D I Y  +I  L RT 
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +   +  + L   +     + D    N  I G +K GD S+A++       + L P   T
Sbjct: 516 RAGQA--EALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I     +G   +A A+FEE+    L+P    + AL+ G  K G ++ A  ++  M 
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV P+  TY+ L+     +GR E A   L+EM  S   P+S  Y  ++          
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              Q++ E+KS G +PDT  YN+++D   K      A+   + M+ +G  PD +T+NTLI
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 483 DCHFKCGRYDRAEELFEEMQ---ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM--R 537
           D   K G  + A  L  +M     R   P   TY+++IN L +  R ++ + L+  M  +
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------------------CLEGL 571
           +  +LPN++TY + +D   +     +A E                          C  G 
Sbjct: 810 SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           +D+A N F  M   G  P+ +  N L+N   +  +   A A+++ M + G+ PDV+TY+ 
Sbjct: 870 TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 632 LMKALIR 638
           L+ A  +
Sbjct: 930 LVDAFCK 936



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 228/487 (46%), Gaps = 29/487 (5%)

Query: 166 YSILIHALGRSEKL---YEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+ L +S +L    E F  L+ +      +TYN LI +  +  DLE+A  L   M 
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 278

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK- 277
                 + + YS++I  L +  +ID +  L+Q++ ++  CD +  +    N  + G  K 
Sbjct: 279 SRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK-SCDVLP-NIITYNSFLDGLCKQ 336

Query: 278 --AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
               +A + MR L     + +SP T T++ +I  L   G+  EA +VF+++   G  P  
Sbjct: 337 SMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 395

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YNAL+ G  K   ++ A  ++  M   GV PD  TYS+L+DA+  A R + A  +L  
Sbjct: 396 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 455

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK-SSGVEPDTHFYNVMIDTFGKYN 454
           M      PN   ++ I+ G          FQ+  +M    G+ PD   Y  +ID   +  
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
               A A  D M     +PDT  +N  I+   K G   RA +++  M E    P   T+N
Sbjct: 516 RAGQAEALLDAM----PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFN 571

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+I    +   +E    L   M A+ L P+V+T+  L+D   ++G+ + A + L+     
Sbjct: 572 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD----- 626

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                 +M   G+ P+ +  N+L++   +  R  EA   L+ M  +G  PD +TY +L+ 
Sbjct: 627 ------LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVY 680

Query: 635 ALIRVDK 641
           AL R  +
Sbjct: 681 ALCRASR 687



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 174/349 (49%), Gaps = 19/349 (5%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFE-ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
            A Y  V+ +L  +G T  A  +F  E+   G+ P    YN ++ G  K   L     + 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            E+   G  PD  TY+ LID+   AG  E AR +  +M      PN   YS ++ G    
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299

Query: 419 GEWQRTFQVLKEM--KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG---IEP 473
           G      ++++EM  KS  V P+   YN  +D   K +    A     R L +G   + P
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSP 358

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DT+T++TLID   KCG+ D A  +F++M   GY P   TYN ++N L + ++ E    ++
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M  +G+ P+V+TY+ LVD + ++ R D+A+E L G++ +           G  P+ + 
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-----------GCTPNVVT 467

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMK-ENGLKPDVVTYTTLMKALIRVDK 641
            NS+I+   +  R  EAF +   M  ++GL PD +TY TL+  L R  +
Sbjct: 468 FNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 216/478 (45%), Gaps = 27/478 (5%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            +TYNAL+    ++  +E+A   + +M   G   D I Y  ++ +L R ++ D +L  +L 
Sbjct: 638  VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL--QLV 695

Query: 254  KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             E++    + D    N ++ G  K+G   +A+  L    G G  P   TY  +I +L  +
Sbjct: 696  SELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKA 755

Query: 314  GRTIEAEAVFEELKESGLK---PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLP 368
            G   EA  +  ++     +   P    Y+ L+ G  K+G + +A  ++ EM R    VLP
Sbjct: 756  GDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLP 815

Query: 369  DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK--PNSFIYSRILAGYRDRGEWQRTFQ 426
            +  TY+  +D          A  +++ +     +  P++  +S ++ G    G+      
Sbjct: 816  NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 875

Query: 427  VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
            V  +M + G  P+   YNV+++   K + +  A A  + M+ +G+ PD IT++ L+D   
Sbjct: 876  VFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 935

Query: 487  KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ-GLLPNV 545
            K    D A EL   M  RG  P   T+N +I+ L + ++  +  ++  +M  + GL P+ 
Sbjct: 936  KASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDK 995

Query: 546  VTYTTLVDIY------GQSGRFDDAIE---------CLEGLS--DQAVNAFRVMRTDGLK 588
            +TY TL+D        GQ+    DA+          C+ GLS       A   M    L 
Sbjct: 996  ITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELV 1055

Query: 589  PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            P  +  N LI    +     +A A+ + M    L+PDV+T+  L+  L +  +    +
Sbjct: 1056 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 205/451 (45%), Gaps = 32/451 (7%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF-- 183
            + SL+  LC + S  D A  +VS L+     + ++   + Y+IL+  L +S +  +A   
Sbjct: 675  YGSLVYALCRA-SRTDDALQLVSELKS----FGWDPDTVTYNILVDGLWKSGQTEQAITV 729

Query: 184  ---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC---DFINYSLVIQS 237
               ++ +      +TYN LI +  +  DLE+A  L   M      C   + + YS++I  
Sbjct: 730  LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLING 789

Query: 238  LTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA---GDASKAMRFLGMAQ 292
            L +  +ID +  L+Q++ ++  CD +  +    N  + G  K     +A + MR L    
Sbjct: 790  LCKVGRIDEARELIQEMMRK-SCDVLP-NIITYNSFLDGLCKQSMMAEACELMRSL-RDG 846

Query: 293  GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             + +SP T T++ +I  L   G+T EA  VF+++   G  P    YN L+ G  K   ++
Sbjct: 847  SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906

Query: 353  DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             A  ++  M   GV PD  TYS+L+DA+  A   + A  +L  M      PN   ++ I+
Sbjct: 907  RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966

Query: 413  AGYRDRGEWQRTFQVLKEMK-SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
             G     +    FQ+  +M    G+ PD   Y  +ID   +      A    D M     
Sbjct: 967  DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM----P 1022

Query: 472  EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            +PDT  +N  I+   K G   RA      M E    P   T+NI+I    +   +E    
Sbjct: 1023 DPDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079

Query: 532  LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            L   M A+ L P+V+T+  L+D   ++G+ +
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 156/375 (41%), Gaps = 42/375 (11%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE----FVVSEMERSG 365
           L  SG   +A  +F        +P    Y+ LL+   K G   D E    F       S 
Sbjct: 121 LVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAG--GDVERTLGFFRRIRSSSR 178

Query: 366 VLPDEHTYSLLIDAYANAGRWESAR---IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            + D   Y++++ +   AG  E+AR   I   EM      P    Y+ I+ G     E  
Sbjct: 179 SVAD---YNIVLQSLCRAG--ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 233

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              ++ +E+   G  PD   YN +ID+  K   L  A      M S    P+ +T++ LI
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293

Query: 483 DCHFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +   K GR D A EL +EM  +     P   TYN  ++ L +Q    +   L+ ++R   
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353

Query: 541 LL--PNVVTYTTLVDIYGQSGRFDDAIECLE-------------------GLS-----DQ 574
           L   P+ VT++TL+D   + G+ D+A    +                   GL      ++
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A      M   G+ P  +  + L++AF +  R  EA  +L  M   G  P+VVT+ +++ 
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473

Query: 635 ALIRVDKFHKVFSSY 649
            L + D+  + F  +
Sbjct: 474 GLCKSDRSGEAFQMF 488



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 146/307 (47%), Gaps = 17/307 (5%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF---- 183
            ++S L  LC   S +  A  ++  L+  +L  S + + +S LI  L +  +  EA     
Sbjct: 820  YNSFLDGLCK-QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878

Query: 184  -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             +++       +TYN L++   + D +E+A  ++  M   G   D I YS+++ +  + +
Sbjct: 879  DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 938

Query: 243  KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTA 301
             +D +L  +L   +       +    N +I G  K+  + +A + F  M    GL+P   
Sbjct: 939  HVDEAL--ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKI 996

Query: 302  TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            TY  +I  L  +G   +AE + + + +    P T A+N  + G  K+G +  A   + E+
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALHRMLEL 1052

Query: 362  ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            E   ++PD+ T+++LI     AG +E A  + +EM   + +P+   +  ++ G    G+ 
Sbjct: 1053 E---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109

Query: 422  QRTFQVL 428
            + T+ ++
Sbjct: 1110 EATWDIM 1116


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 259/559 (46%), Gaps = 18/559 (3%)

Query: 95  SNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSS---NSSIDLAYAVVS 151
           +N  SA     +     RV  ++ E   +     ++ ++  LC +   + +I+L  ++V 
Sbjct: 219 TNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVD 278

Query: 152 WLQKHNLCYSYELLYS-ILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLE 210
                +L Y+Y++L +   +    R  KL    ++    +  P+TYNALI    R  D+E
Sbjct: 279 KGLVPDL-YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 337

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +A  +  +M   G   + I ++ ++  + +  K++ +L  ++ +E+    +E D Q  + 
Sbjct: 338 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL--EIMQEMMEKGVEPDSQTYSL 395

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G  +  + ++A   L   +   L+P   TY+ +I  L   G      A+  E+  +G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           LKP    Y  L+  + K G ++++  ++  M   G+LPD   Y+ LI  +  A R E AR
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
             L EM     +PN+  Y   + GY   GE +   +   EM S GV P+   Y  +I+  
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A + F  +LS  +  D  T++ LI    + G+   A  +F E+QE+G  P  
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN +I+   +Q   +   +LL  M  +G+ P++VTY  L+D   ++G  +        
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE-------- 687

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
              +A N F  +   GL P+ +   ++++ + + +    AF +L+ M   G+ PD   Y 
Sbjct: 688 ---RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744

Query: 631 TLMKALIRVDKFHKVFSSY 649
            ++    + +KF K    +
Sbjct: 745 VILNFCCKEEKFEKALDLF 763



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 256/542 (47%), Gaps = 38/542 (7%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           +W++LL  +C +   ++ A  ++  + +  +    +  YS+LI    R + +  AF L  
Sbjct: 357 IWNTLLNGVCKA-GKMEKALEIMQEMMEKGVEPDSQT-YSLLIEGHCRGQNMARAFELLD 414

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++++L P  LTY+ +I+   R  +L+    ++ +M  +G   + + Y+ ++ +  +  
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474

Query: 243 KIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +++ S  +L+++ ++     I  D    N +I+GF KA    +A  +L       L P  
Sbjct: 475 RVEESRMILERMREQ----GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY A I   S +G    A+  F E+   G+ P    Y AL++G+ K G + +A  V   
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           +    VL D  TYS+LI   +  G+   A  +  E++     PN+F Y+ +++G   +G 
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 650

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +  Q+L+EM   G+ PD   YN++ID   K   +  A   FD +   G+ P+ +T+  
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++D + K      A +L EEM  RG  P    YN+++N   ++E++E    L   M  +G
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDA-------IE-----------------CLEGLSDQAV 576
              + V++ TL++ Y +SG+  +A       IE                 C  G+  +A 
Sbjct: 771 F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +  M+   + P+     SL++ +      +E  A+ + M   G++PD +TY  ++ A 
Sbjct: 830 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 889

Query: 637 IR 638
            R
Sbjct: 890 CR 891



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 177/372 (47%), Gaps = 25/372 (6%)

Query: 267 LLNDVIVG-----FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           LL D++ G     F K  D   A + L         P   TY  +I+A    G   +A+ 
Sbjct: 186 LLGDLLKGNKVELFWKVFDGMCAHKVL---------PDVYTYTNMISAHCKVGNVKDAKR 236

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           V  E+ E G  P    YN ++ G  +   L +A  +   M   G++PD +TY +LI+ + 
Sbjct: 237 VLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 296

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R   A+++L EM     KP    Y+ ++ G+  +G+ ++ F++  EM + G+E +  
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            +N +++   K   +  A+     M+ +G+EPD+ T++ LI+ H +     RA EL +EM
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ++R   P   TY+++IN L      +    +L  M   GL PN V YTTL+  + + GR 
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           +++   LE            MR  G+ P     NSLI  F + +R  EA   L  M E  
Sbjct: 477 EESRMILER-----------MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525

Query: 622 LKPDVVTYTTLM 633
           L+P+  TY   +
Sbjct: 526 LRPNAHTYGAFI 537



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 208/455 (45%), Gaps = 48/455 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  +ISA  +  +++ A  ++ +M + G   + + Y+++I  L R   +D +       
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA------- 269

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                 IEL   +++                         GL P   TY  +I       
Sbjct: 270 ------IELKRSMVDK------------------------GLVPDLYTYDILINGFCMEK 299

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R+ EA+ +  E+ + GLKP    YNAL+ G+++ G ++ A  +  EM   G+  +   ++
Sbjct: 300 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++    AG+ E A  +++EM     +P+S  YS ++ G+       R F++L EMK  
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P    Y+V+I+   +   L    A    M+  G++P+ + + TL+  H K GR + +
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + E M+E+G  P    YN +I    + +R E+ +  L  M  + L PN  TY   +D 
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y ++G  +        ++D+  N    M + G+ P+     +LI    ++    EAF+V 
Sbjct: 540 YSKAGEME--------IADRYFNE---MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +++    +  DV TY+ L+  L R  K H+ F  +
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 189/393 (48%), Gaps = 8/393 (2%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+LIH L R+ K++EAF +    Q + L P   TYN+LIS   +  +++KA  L+ +M 
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G + D + Y+++I  L +  +I+ +  + L+ +IE   +  +      ++ G+ K+ +
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERA--KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A + L      G+ P    Y  ++       +  +A  +F+E+ E G    T ++N 
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNT 779

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++GY K G L++A  ++ EM     +P+  TY+ LID    AG    A+ +  EM+  +
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  Y+ +L GY + G       + +EM + G+EPD   Y VMID + +   +  A 
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D +L +G+      ++ LI    K   +    +L  E+ E G+     T +++    
Sbjct: 900 KLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGF 959

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
                 ++   +L +M   G + N  +   LVD
Sbjct: 960 QIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 125/548 (22%), Positives = 215/548 (39%), Gaps = 121/548 (22%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALI 200
           A+ ++  ++K  L  +  L YS++I+ L R   L     + +   +  L      Y  L+
Sbjct: 409 AFELLDEMKKRKLAPTV-LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIE 257
           +A A+   +E++  ++ +MR+ G   D   Y+ +I    +  +++ +   L++ L +   
Sbjct: 468 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER--- 524

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA---------------- 301
             ++  +       I G++KAG+   A R+       G+ P                   
Sbjct: 525 --RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582

Query: 302 -------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
                              TY+ +I  LS +G+  EA  +F EL+E GL P    YN+L+
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G  K G +  A  ++ EM   G+ PD  TY++LID    AG  E A+ +  ++E     
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ ++ GY         FQ+L+EM   GV PD   YNV+++   K      A+  
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762

Query: 463 FDRM------------------------------LSEGIE----PDTITWNTLIDCHFKC 488
           F  M                              L E IE    P+ +T+ +LID + K 
Sbjct: 763 FQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKA 822

Query: 489 GRYDRAEEL-----------------------------------FEEMQERGYFPCTTTY 513
           G    A+ L                                   FEEM  +G  P   TY
Sbjct: 823 GMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 882

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            +MI+    +    +  +L   +  +G+  +V  Y  L+    +   F    E L+ L++
Sbjct: 883 YVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEF---FEVLKLLNE 939

Query: 574 QAVNAFRV 581
              + FR+
Sbjct: 940 IGESGFRL 947


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 234/488 (47%), Gaps = 19/488 (3%)

Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKAL 213
           +SY+ + Y+ L+   G+S +  EA  +     L   +P  +TYN+LISA AR+  L++A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L ++M + G   D   Y+ ++    R  K++S++   +++E+     + +    N  I 
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM--SIFEEMRNAGCKPNICTFNAFIK 427

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +   G  ++ M+        GLSP   T+  ++     +G   E   VF+E+K +G  P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
             + +N L+  Y + G  + A  V   M  +GV PD  TY+ ++ A A  G WE +  VL
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EME    KPN   Y  +L  Y +  E      + +E+ S  +EP       ++    K 
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + L  A  AF  +   G  PD  T N+++  + +     +A  + + M+ERG+ P   TY
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N ++ +      +   + +L  + A+G+ P++++Y T++  Y ++ R  DA         
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI------ 721

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                F  MR  G+ P  +  N+ I ++  D    EA  V++YM ++G +P+  TY +++
Sbjct: 722 -----FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776

Query: 634 KALIRVDK 641
               ++++
Sbjct: 777 DGYCKLNR 784



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 248/572 (43%), Gaps = 42/572 (7%)

Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNL--CSSNSSIDLAYAVVSWLQKHNLCYSY--ELL 165
           L+ V  +L E ++  P      LL  L     +   DLA     W  K     S     +
Sbjct: 116 LDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV 175

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
            +I+I  LG+  ++  A      L      L   +Y +LISA A +    +A+N+  KM 
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235

Query: 221 QDGYHCDFINYSLVIQSL----TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +DG     I Y++++       T  NKI S     L ++++ D I  D    N +I    
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITS-----LVEKMKSDGIAPDAYTYNTLITCCK 290

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +     +A +     +  G S    TY A++     S R  EA  V  E+  +G  P   
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN+L+  Y + G L +A  + ++M   G  PD  TY+ L+  +  AG+ ESA  + +EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +  KPN   ++  +  Y +RG++    ++  E+   G+ PD   +N ++  FG+    
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
                 F  M   G  P+  T+NTLI  + +CG +++A  ++  M + G  P  +TYN +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ---------------SGRF 561
           +  L     WE  +++L  M      PN +TY +L+  Y                 SG  
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590

Query: 562 DDAIECLEGLS---------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           +     L+ L           +A  AF  ++  G  P    LNS+++ +G  Q  A+A  
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           VL YMKE G  P + TY +LM    R   F K
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I+ L   GR   A  +F  L+E G      +Y +L+  +   G  ++A  V  +ME 
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ +   G  W     ++++M+     P+++ Y+ ++   +     Q
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              QV +EMK++G   D   YN ++D +GK +    AM   + M+  G  P  +T+N+LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  D A EL  +M E+G  P   TY  +++      + E    +   MR  G  
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+   + +YG  G+F + ++            F  +   GL P  +  N+L+  FG
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKI-----------FDEINVCGLSPDIVTWNTLLAVFG 465

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ A  R   F +  + Y
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 141/287 (49%), Gaps = 12/287 (4%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D    +++I      GR  SA  +   ++      + + Y+ +++ + + G ++    V 
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFK 487
           K+M+  G +P    YNV+++ FGK     + + +  ++M S+GI PD  T+NTLI C  +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
              +  A ++FEEM+  G+     TYN ++++ G+  R ++  ++L  M   G  P++VT
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y +L+  Y + G  D+A+E    L +Q       M   G KP      +L++ F    + 
Sbjct: 352 YNSLISAYARDGMLDEAME----LKNQ-------MAEKGTKPDVFTYTTLLSGFERAGKV 400

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             A ++ + M+  G KP++ T+   +K      KF ++   +   N+
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/412 (21%), Positives = 172/412 (41%), Gaps = 42/412 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+    R+ K+  A  + +  R     P   T+NA I          + + +  ++ 
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + ++ ++    + N +DS +   ++KE++      + +  N +I  +++ G 
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQ-NGMDSEV-SGVFKEMKRAGFVPERETFNTLISAYSRCGS 504

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM         G++P  +TY  V+ AL+  G   ++E V  E+++   KP    Y +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564

Query: 341 LLKGYV-----------------------------------KMGYLKDAEFVVSEMERSG 365
           LL  Y                                    K   L +AE   SE++  G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PD  T + ++  Y        A  VL  M+     P+   Y+ ++  +    ++ ++ 
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L+E+ + G++PD   YN +I  + +   +  A   F  M + GI PD IT+NT I  +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
                ++ A  +   M + G  P   TYN +++   +  R ++ K  + ++R
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 167/668 (25%), Positives = 300/668 (44%), Gaps = 75/668 (11%)

Query: 18  SACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTEEEEEDDDDVLSL 77
           S+ PIT H +   P  S+        +  S   +  S          +E++ DD      
Sbjct: 57  SSVPITTHTLTIVPP-SLDNTKNFNKSVNSKHPTLGSDPII------DEDQFDDAK---- 105

Query: 78  QKQRYDFTPLLNFLSENS----NSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLL 133
                       FLS+      NS   S L       N V+F+L E+        + SLL
Sbjct: 106 ----------FRFLSDKGKLLLNSVVGSPLHELNDFFNSVKFELLEAD-------FPSLL 148

Query: 134 KNL-CSSNSSIDLAYAVVSWLQ---KHNLCYSYELLYSILIHALGR------SEKLYEAF 183
           K L  S N    L      WL      NL    +++  +++  LGR      + KL++  
Sbjct: 149 KALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSIASKLFD-L 206

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  ++  L    Y  ++ A AR+   ++A++L  KM   G     + Y++++    +  +
Sbjct: 207 IPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGR 266

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
               +L+ L  E+    +E D    + VI    + G   +A +FL   +  G  P T  Y
Sbjct: 267 SWGRILE-LLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMY 325

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++     +G   EA ++ +E++++   P +  YN L   YV+ G+L +   V+  M  
Sbjct: 326 NSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTS 385

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV+P+  TY+ +IDAY  AGR + A  +  +M+     PN + Y+ +LA    +   + 
Sbjct: 386 KGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTED 445

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +VL EMK +G  P+   +N M+      GK+N ++  +     M + G EPD  T+NT
Sbjct: 446 VIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLR---EMKNCGFEPDKDTFNT 502

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI  + +CG    + +++ EM + G+ PC TTYN ++N L  +  W+  + ++ +M+ +G
Sbjct: 503 LISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKG 562

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV------------------------ 576
             PN  +Y+ L+  Y ++G      +  + + D  V                        
Sbjct: 563 FKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGME 622

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            AF  ++  G KP  + +NS+++ F  ++  ++A  +L ++ E GL+P++ TY  LM   
Sbjct: 623 RAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLY 682

Query: 637 IRVDKFHK 644
           +R D+  K
Sbjct: 683 VREDECWK 690



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 221/484 (45%), Gaps = 20/484 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ ++   G++    EA   L        P   +TYN L +   R   L++ + ++  
Sbjct: 323 VMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDT 382

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   + I Y+ VI +  +  + D +L  +L+ +++      +    N V+    K 
Sbjct: 383 MTSKGVMPNAITYTTVIDAYGKAGREDDAL--RLFSKMKDLGCAPNVYTYNSVLAMLGKK 440

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                 ++ L   +  G +P  AT+  ++   S  G+      V  E+K  G +P    +
Sbjct: 441 SRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTF 500

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+  Y + G   D+  +  EM +SG  P   TY+ L++A A+ G W++A  V+++M+ 
Sbjct: 501 NTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQT 560

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN   YS +L  Y   G  +   +V KE+    V P       ++ +  K   L  
Sbjct: 561 KGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRG 620

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
              AFD++   G +PD +  N+++    +   + +A E+   + E G  P   TYN +++
Sbjct: 621 MERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMD 680

Query: 519 L-LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           L + E E W+  + +L  ++     P+VV+Y T++  +           C +GL  +A+ 
Sbjct: 681 LYVREDECWK-AEEVLKGIQNSVPEPDVVSYNTVIKGF-----------CRKGLMQEAIR 728

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M T G++P+ +  N+ ++ +   +   EA  V+++M E+  +P  +TY  L+    
Sbjct: 729 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYC 788

Query: 638 RVDK 641
           +  K
Sbjct: 789 KAGK 792



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/408 (20%), Positives = 186/408 (45%), Gaps = 7/408 (1%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ +I A G++ +  +A  L  + +     P   TYN++++   +    E  + ++ +
Sbjct: 393 ITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCE 452

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+ +G   +   ++ ++   +   K   + + K+ +E++    E D    N +I  +A+ 
Sbjct: 453 MKLNGCAPNRATWNTMLAVCSEEGK--HNYVNKVLREMKNCGFEPDKDTFNTLISSYARC 510

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    + +  G     G +P   TY A++ AL++ G    AE+V ++++  G KP   +Y
Sbjct: 511 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSY 570

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + LL  Y K G ++  E V  E+    V P       L+ +               +++ 
Sbjct: 571 SLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQK 630

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  + + +L+ +     + +  ++L  +   G++P+   YN ++D + + +    
Sbjct: 631 YGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWK 690

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      + +   EPD +++NT+I    + G    A  +  EM  +G  P   TYN  ++
Sbjct: 691 AEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLS 750

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                E +++   ++  M      P+ +TY  LVD Y ++G+ ++A++
Sbjct: 751 GYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMD 798



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYNAL++A A   D + A +++  M+  G+  +  +YSL++   ++   +    ++K+ K
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRG--IEKVEK 591

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           EI       DGQ+    I+         K     GM                        
Sbjct: 592 EI------YDGQVFPSWILLRTLVLSNHKCRHLRGM------------------------ 621

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                E  F++L++ G KP     N++L  + +      A  ++  +   G+ P+  TY+
Sbjct: 622 -----ERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYN 676

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+D Y        A  VLK ++ S  +P+   Y+ ++ G+  +G  Q   +VL EM + 
Sbjct: 677 CLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTK 736

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++P    YN  +  +        A      M+     P  +T+  L+D + K G+++ A
Sbjct: 737 GIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEA 796

Query: 495 EELFEEMQE 503
            +   +++E
Sbjct: 797 MDFVTKIKE 805



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 44/246 (17%)

Query: 161 SYELLYSILI--HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLM 216
           S+ LL ++++  H       +  AF   Q+    P  +  N+++S  +RN    KA  ++
Sbjct: 601 SWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREML 660

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
             + + G   +   Y+ ++    R ++   +  +++ K I+    E D    N VI GF 
Sbjct: 661 HFIHECGLQPNLFTYNCLMDLYVREDECWKA--EEVLKGIQNSVPEPDVVSYNTVIKGFC 718

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G   +A+R L      G+ P   T                                  
Sbjct: 719 RKGLMQEAIRVLSEMTTKGIQPTIVT---------------------------------- 744

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR---IVL 393
            YN  L GY  M    +A  V+  M      P E TY +L+D Y  AG+ E A      +
Sbjct: 745 -YNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKI 803

Query: 394 KEMEVS 399
           KE+++S
Sbjct: 804 KEIDIS 809


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 237/482 (49%), Gaps = 18/482 (3%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           +++ +LI A   L R +  +E F + + + + P   T+NA++S   + +  E    L ++
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +         ++++I  L +  K+  +  +     +E   ++ +    N VI G+   
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKA--KDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A   L + +  G+ P + TY ++I+ +   G+  EA  + E++KE GL P    Y
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY   G L  A     EM R  +LP   TY+LLI A    G+ + A  ++K+M  
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+S  Y+ ++ GY   G  ++ F +  EM S G++P    Y  +I    K N +  
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F++++ EG  PD I +N LID H   G  DRA  L +EM +R   P   TYN ++ 
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
               + + E+ + LL  M+ +G+ P+ ++Y TL+  Y + G  +DA      + D+    
Sbjct: 525 GRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT----IRDE---- 576

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M + G  P+ L  N+LI    ++Q+   A  +L+ M   G+ PD  TY +L++ + +
Sbjct: 577 ---MLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633

Query: 639 VD 640
           VD
Sbjct: 634 VD 635



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 161/346 (46%), Gaps = 11/346 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L   G+  +A+     ++  G+KP    YN ++ GY   G ++ A  V+  M
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  GV PD +TY  LI      G+ E A  +L++M+     P +  Y+ ++ GY ++G+ 
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            + F    EM    + P    YN++I        +  A      M   GI PD+IT+N L
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+ + +CG   +A  L +EM  +G  P   TY  +I +L ++ R +    L   +  +G 
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+++ +  L+D +           C  G  D+A    + M    + P  +  N+L+   
Sbjct: 478 SPDLIMFNALIDGH-----------CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             + +  EA  +L+ MK  G++PD ++Y TL+    +    +  F+
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT 572



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 11/189 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD M  +G+ P   T+N ++    K  + +    L+ EM          T+NIMIN
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +L ++ + +  K  +G+M   G+ PNVVTY T++  Y   GR + A   L+         
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD--------- 295

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +M+  G++P +    SLI+   +  +  EA  +L+ MKE GL P  VTY TL+     
Sbjct: 296 --IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCN 353

Query: 639 VDKFHKVFS 647
                K F 
Sbjct: 354 KGDLVKAFG 362



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 14/255 (5%)

Query: 385 RWESARIVLKEMEVSHAK---PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           R    + V  E+ ++  +    +S ++  ++    +       F+    MK  GV P   
Sbjct: 143 RVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIE 202

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            +N M+  F K N        +  M    I+    T+N +I+   K G+  +A++    M
Sbjct: 203 TFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM 262

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G  P   TYN +I+    + R E  + +L  M+ +G+ P+  TY +L+    + G+ 
Sbjct: 263 ENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           ++A   LE            M+  GL P+ +  N+LI+ +       +AF     M    
Sbjct: 323 EEASGILEK-----------MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 622 LKPDVVTYTTLMKAL 636
           + P V TY  L+ AL
Sbjct: 372 ILPTVSTYNLLIHAL 386



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 9/162 (5%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           ++++L+   C+ N ++D A+A++  + K N+    E+ Y+ L+    R  K+ EA  L  
Sbjct: 483 MFNALIDGHCA-NGNLDRAFALLKEMDKRNIVPD-EVTYNTLMQGRCREGKVEEARELLK 540

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             +R+ + P  ++YN LIS  ++  D+  A  +  +M   G++   + Y+ +IQ L +  
Sbjct: 541 EMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQ 600

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           + D  L ++L KE+    I  D      +I G  K  D+S+A
Sbjct: 601 QGD--LAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 245/528 (46%), Gaps = 38/528 (7%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           + +LL  LC  +    ++D  + +     + N+     + ++ L++ L R  ++ EA  L
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV-----VTFTTLMNGLCREGRIVEAVAL 206

Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLT 239
             R      + T +TY  ++    +  D   ALNL+ KM +  +   + + YS +I SL 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  +   S  Q L+ E++   I  D    N +IVGF  +G  S A + L       +SP 
Sbjct: 267 KDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A+I A    G+  EA  +++E+   G+ P T  YN+++ G+ K   L  AE +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFY 384

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  PD  T++ LID Y  A R +    +L EM       N+  Y+ ++ G+   G
Sbjct: 385 LMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS----------- 468
           +      + ++M SSGV PD    N ++D       L  A+  F  M             
Sbjct: 445 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 504

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+EPD +T+N LI      G++  AEEL+EEM  RG  P T TY+ MI+ L +Q R ++
Sbjct: 505 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++  +M ++   PNVVT+ TL++ Y ++GR DD +E            F  M   G+ 
Sbjct: 565 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE-----------LFCEMGRRGIV 613

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +   +LI  F +      A  + Q M  +G+ PD +T   ++   
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 221/471 (46%), Gaps = 25/471 (5%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L  R   + + +  L+    R +  +  ++L  KM +    CD  +++++I+     +K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSK 129

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +L    + +I    +  D      ++ G       S+A+ F          P   T+
Sbjct: 130 LPFAL--STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF 187

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   GR +EA A+ + + E GL+P    Y  ++ G  K G    A  ++ +ME 
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247

Query: 364 -SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            S ++P+   YS +ID+    GR   A+ +  EM+     P+ F Y+ ++ G+   G W 
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              Q+L+EM    + PD   YN +I+ F K      A   +D ML  GI P+TIT+N++I
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 367

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K  R D AE++F  M  +G  P   T+  +I+     +R +D   LL  M  +GL+
Sbjct: 368 DGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLV 427

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            N VTY TL+  +           CL G  + A++  + M + G+ P  +  N+L++   
Sbjct: 428 ANTVTYNTLIHGF-----------CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476

Query: 603 EDQRDAEAFAVLQYMKE-----------NGLKPDVVTYTTLMKALIRVDKF 642
           ++ +  +A  + + M++           NG++PDV+TY  L+  LI   KF
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 527



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 222/463 (47%), Gaps = 16/463 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKL 252
           ++N LI        L  AL+   K+ + G H D + ++ ++  L   +++  +L    ++
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           ++      +     L+N    G  + G   +A+  L      GL P   TY  ++  +  
Sbjct: 176 FETTCRPNVVTFTTLMN----GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 313 SGRTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            G T+ A  +  +++E S + P    Y+A++    K G   DA+ + +EM+  G+ PD  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ +I  + ++GRW  A  +L+EM      P+   Y+ ++  +   G++    ++  EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ P+T  YN MID F K + L  A   F  M ++G  PD  T+ TLID +    R 
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           D   EL  EM  RG    T TYN +I+   L+G+     D+ +    M + G+ P++VT 
Sbjct: 412 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ---QMISSGVCPDIVTC 468

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            TL+D    +G+  DA+E  + +    ++       +G++P  L  N LI     + +  
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL 528

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           EA  + + M   G+ PD +TY++++  L    R+D+  ++F S
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 247/546 (45%), Gaps = 37/546 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           ++ L+K  CS  S +  A +    + K  L +   + ++ L+H L   +++ EA      
Sbjct: 117 FNILIKCFCSC-SKLPFALSTFGKITKLGL-HPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +     R   +T+  L++   R   + +A+ L+ +M +DG     I Y  ++  + +   
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             S+L   L K  E   I  +  + + +I    K G  S A       Q  G+ P   TY
Sbjct: 235 TVSAL-NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I    +SGR  +AE + +E+ E  + P    YNAL+  +VK G   +A  +  EM  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++P+  TY+ +ID +    R ++A  +   M      P+ F ++ ++ GY        
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L EM   G+  +T  YN +I  F     L+ A+    +M+S G+ PD +T NTL+D
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 484 CHFKCGRYDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQERWEDVKRL 532
                G+   A E+F+ MQ+            G  P   TYNI+I  L  + ++ + + L
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G++P+ +TY++++D   +  R D+A +            F  M +    P+ +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ-----------MFVSMGSKSFSPNVV 582

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV-------DKFHKV 645
             N+LIN + +  R  +   +   M   G+  D + Y TL+    +V       D F ++
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642

Query: 646 FSSYLF 651
            SS ++
Sbjct: 643 ISSGVY 648



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 173/391 (44%), Gaps = 22/391 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQ 187
           ++S++   CSS    D    +   L++     S +++ Y+ LI+A  +  K +EA  L  
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 188 R---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
               + + P  +TYN++I    + D L+ A ++   M   G   D   ++ +I       
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +ID  +  +L  E+    +  +    N +I GF   GD + A+         G+ P   T
Sbjct: 410 RIDDGM--ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 467

Query: 303 YAAVITALSNSGRTIEAEAVFEELKES-----------GLKPRTKAYNALLKGYVKMGYL 351
              ++  L ++G+  +A  +F+ +++S           G++P    YN L+ G +  G  
Sbjct: 468 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 527

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +AE +  EM   G++PD  TYS +ID      R + A  +   M      PN   ++ +
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 587

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G      ++  EM   G+  D   Y  +I  F K   ++ A+  F  M+S G+
Sbjct: 588 INGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 647

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            PDTIT   ++   +     +RA  + E++Q
Sbjct: 648 YPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 192/447 (42%), Gaps = 22/447 (4%)

Query: 108 SSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S+LN +  K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y
Sbjct: 237 SALNLLR-KMEEVSHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTY 293

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + +I     S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I Y+ +I    + +++D++  + ++  +       D      +I G+  A   
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAA--EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              M  L      GL   T TY  +I      G    A  + +++  SG+ P     N L
Sbjct: 412 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 471

Query: 342 LKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESAR 390
           L G    G LKDA  +   M++S           GV PD  TY++LI    N G++  A 
Sbjct: 472 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 531

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P++  YS ++ G   +       Q+   M S    P+   +N +I+ +
Sbjct: 532 ELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +   +  F  M   GI  D I + TLI    K G  + A ++F+EM   G +P T
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDT 651

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMR 537
            T   M+     +E  E    +L +++
Sbjct: 652 ITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 12/310 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +  ++      + +  A+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            ++        LL  M     ++PNVV Y+ ++D   + GR  DA            N F
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDA-----------QNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKFHKVFSSY 649
            KF +    Y
Sbjct: 339 GKFFEAAELY 348



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 13/252 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI       DL  AL+L  +M   G   D +  + ++  L    K+  +L  +++
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL--EMF 488

Query: 254 KEIECDKIELDGQ-----------LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K ++  K++LD               N +I G    G   +A          G+ P T T
Sbjct: 489 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L    R  EA  +F  +      P    +N L+ GY K G + D   +  EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 608

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R G++ D   Y  LI  +   G    A  + +EM  S   P++     +L G+  + E +
Sbjct: 609 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 668

Query: 423 RTFQVLKEMKSS 434
           R   +L++++ S
Sbjct: 669 RAVAMLEDLQMS 680


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 259/525 (49%), Gaps = 17/525 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A   P ++++L  L  S++S+  A   +S + +H +  +    Y+IL+ AL    +L EA
Sbjct: 115 APSVPAYNAVLLAL--SDASLPSARRFLSSMLRHGVAPNV-YTYNILVRALCARGRLEEA 171

Query: 183 FLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQ 236
             +    R     P  +TYN L++A  R  +L+ A  ++S MR++G    + + ++ ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L +  +++ +  +K++ E+  + +  D    N ++ G+ K G   +++         GL
Sbjct: 232 GLCKAGRMEGA--RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   T+ ++I A   +G   +A A+  +++E GL+     + AL+ G+ K G+L DA  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
            V EM + G+ P    Y+ LI+ Y   GR + AR +++EME    KP+   YS I++GY 
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G     FQ+ ++M   GV PD   Y+ +I    +   L+ A   F+ ML  G++PD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ TLID H K G  ++A  L +EM  +G  P   TY+++IN L +  R ++  RLL  +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSN 591
             +  +P+ + Y  L+ +      F   +      C++GL  +A   ++ M     K   
Sbjct: 530 YHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              + LI+         +A +  + M  +G  P+  +  +L++ L
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 179/380 (47%), Gaps = 13/380 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N V++  + A   S A RFL      G++P   TY  ++ AL   GR  EA  V  +++ 
Sbjct: 122 NAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRG 180

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-VLPDEHTYSLLIDAYANAGRWE 387
           +G  P    YN L+  + + G L  AE VVS M   G   P+  T++ +++    AGR E
Sbjct: 181 AGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME 240

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            AR V  EM      P+   Y+ +L+GY   G    +  V  EM   G+ PD   +  +I
Sbjct: 241 GARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   L  A+A   +M   G+  + +T+  LID   K G  D A    EEM++ G  
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    YN +IN   +  R +  + L+  M A+ + P+VVTY+T++  Y + G  D A + 
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ- 419

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
              L+ +       M   G+ P  +  +SLI    E++R  +A  + + M + G++PD  
Sbjct: 420 ---LNQK-------MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 628 TYTTLMKALIRVDKFHKVFS 647
           TYTTL+    +     K  S
Sbjct: 470 TYTTLIDGHCKEGNVEKALS 489



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P   AYNA+L   +    L  A   +S M R GV P+ +TY++L+ A    GR E A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMID 448
             V+ +M  +   PN+  Y+ ++A +   GE     +V+  M+  G  +P+   +N M++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A   FD M+ EG+ PD +++NTL+  + K G    +  +F EM +RG  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+  +I+   +    E    L+  MR +GL  N VT+T L+D + + G  DDA+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E            MR  G++PS +  N+LIN + +  R   A  +++ M+   +KPDVVT
Sbjct: 352 EE-----------MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 629 YTTLMKALIRVDKFHKVF 646
           Y+T++    +V      F
Sbjct: 401 YSTIISGYCKVGNLDSAF 418



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 168/416 (40%), Gaps = 42/416 (10%)

Query: 84  FTPLLNFLSENSNSESASALASSPSS----LNRVEFKLAESYRAVPAPLWHSLLKNLCSS 139
           FT L++   +  N E A AL +        +N V F               +L+   C  
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT--------------ALIDGFCK- 340

Query: 140 NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--L 194
              +D A   V  ++K  +  S  + Y+ LI+    LGR +   E     + +R+ P  +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSV-VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ +IS   +  +L+ A  L  KM + G   D I YS +I+ L    +++ +   +L++
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC--ELFE 457

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    ++ D      +I G  K G+  KA+         G+ P   TY+ +I  LS S 
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 315 RTIEA----------EAVFEELKESGL-----KPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           RT EA          + V + +K   L     K   K+  ALLKG+   G +K+A+ V  
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M       D   YS+LI  +   G    A    K+M  S   PNS     ++ G  + G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                   ++++ +     D      +ID   K   +   +     M  +G+ P +
Sbjct: 638 MVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 259/525 (49%), Gaps = 17/525 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A   P ++++L  L  S++S+  A   +S + +H +  +    Y+IL+ AL    +L EA
Sbjct: 115 APSVPAYNAVLLAL--SDASLPSARRFLSSMLRHGVAPNV-YTYNILVRALCARGRLEEA 171

Query: 183 FLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQ 236
             +    R     P  +TYN L++A  R  +L+ A  ++S MR++G    + + ++ ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L +  +++ +  +K++ E+  + +  D    N ++ G+ K G   +++         GL
Sbjct: 232 GLCKAGRMEGA--RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   T+ ++I A   +G   +A A+  +++E GL+     + AL+ G+ K G+L DA  
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
            V EM + G+ P    Y+ LI+ Y   GR + AR +++EME    KP+   YS I++GY 
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G     FQ+ ++M   GV PD   Y+ +I    +   L+ A   F+ ML  G++PD  
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ TLID H K G  ++A  L +EM  +G  P   TY+++IN L +  R ++  RLL  +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSN 591
             +  +P+ + Y  L+ +      F   +      C++GL  +A   ++ M     K   
Sbjct: 530 YHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              + LI+         +A +  + M  +G  P+  +  +L++ L
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 179/380 (47%), Gaps = 13/380 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N V++  + A   S A RFL      G++P   TY  ++ AL   GR  EA  V  +++ 
Sbjct: 122 NAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRG 180

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-VLPDEHTYSLLIDAYANAGRWE 387
           +G  P    YN L+  + + G L  AE VVS M   G   P+  T++ +++    AGR E
Sbjct: 181 AGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME 240

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            AR V  EM      P+   Y+ +L+GY   G    +  V  EM   G+ PD   +  +I
Sbjct: 241 GARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI 300

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   L  A+A   +M   G+  + +T+  LID   K G  D A    EEM++ G  
Sbjct: 301 HATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQ 360

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    YN +IN   +  R +  + L+  M A+ + P+VVTY+T++  Y + G  D A + 
Sbjct: 361 PSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ- 419

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
              L+ +       M   G+ P  +  +SLI    E++R  +A  + + M + G++PD  
Sbjct: 420 ---LNQK-------MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469

Query: 628 TYTTLMKALIRVDKFHKVFS 647
           TYTTL+    +     K  S
Sbjct: 470 TYTTLIDGHCKEGNVEKALS 489



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 13/318 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P   AYNA+L   +    L  A   +S M R GV P+ +TY++L+ A    GR E A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMID 448
             V+ +M  +   PN+  Y+ ++A +   GE     +V+  M+  G  +P+   +N M++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A   FD M+ EG+ PD +++NTL+  + K G    +  +F EM +RG  P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+  +I+   +    E    L+  MR +GL  N VT+T L+D + + G  DDA+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E            MR  G++PS +  N+LIN + +  R   A  +++ M+   +KPDVVT
Sbjct: 352 EE-----------MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 629 YTTLMKALIRVDKFHKVF 646
           Y+T++    +V      F
Sbjct: 401 YSTIISGYCKVGNLDSAF 418



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 174/428 (40%), Gaps = 45/428 (10%)

Query: 84  FTPLLNFLSENSNSESASALASSPSS----LNRVEFKLAESYRAVPAPLWHSLLKNLCSS 139
           FT L++   +  N E A AL +        +N V F               +L+   C  
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT--------------ALIDGFCK- 340

Query: 140 NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--L 194
              +D A   V  ++K  +  S  + Y+ LI+    LGR +   E     + +R+ P  +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSV-VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ +IS   +  +L+ A  L  KM + G   D I YS +I+ L    +++ +   +L++
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC--ELFE 457

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    ++ D      +I G  K G+  KA+         G+ P   TY+ +I  LS S 
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 315 RTIEA----------EAVFEELKESGL-----KPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           RT EA          + V + +K   L     K   K+  ALLKG+   G +K+A+ V  
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQ 577

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M       D   YS+LI  +   G    A    K+M  S   PNS     ++ G  + G
Sbjct: 578 SMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                   ++++ +     D      +ID   +   + +  A  +   SE   P    WN
Sbjct: 638 MVVEADNAIQDLLTCCPLADAEASKALID-LNRKEGMDYFQAQGEIWYSES-SPSVEYWN 695

Query: 480 TLID-CHF 486
            ++  CHF
Sbjct: 696 YMMTICHF 703


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 231/491 (47%), Gaps = 14/491 (2%)

Query: 160 YSYELLYS-ILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           Y+Y++L +   +    R  KL    ++    +  P+TYNALI    R  D+E+A  +  +
Sbjct: 277 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   + I ++ ++  + +  K++ +L  ++ +E+    +E D Q  + +I G  + 
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKAL--EIMQEMMEKGVEPDSQTYSLLIEGHCRG 394

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            + ++A   L   +   L+P   TY+ +I  L   G      A+  E+  +GLKP    Y
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+  + K G ++++  ++  M   G+LPD   Y+ LI  +  A R E AR  L EM  
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +PN+  Y   + GY   GE +   +   EM S GV P+   Y  +I+   K   +  
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F  +LS  +  D  T++ LI    + G+   A  +F E+QE+G  P   TYN +I+
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +Q   +   +LL  M  +G+ P++VTY  L+D   ++G  +           +A N 
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE-----------RAKNL 683

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  +   GL P+ +   ++++ + + +    AF +L+ M   G+ PD   Y  ++    +
Sbjct: 684 FDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCK 743

Query: 639 VDKFHKVFSSY 649
            +KF K    +
Sbjct: 744 EEKFEKALDLF 754



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 256/542 (47%), Gaps = 38/542 (7%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           +W++LL  +C +   ++ A  ++  + +  +    +  YS+LI    R + +  AF L  
Sbjct: 348 IWNTLLNGVCKA-GKMEKALEIMQEMMEKGVEPDSQT-YSLLIEGHCRGQNMARAFELLD 405

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++++L P  LTY+ +I+   R  +L+    ++ +M  +G   + + Y+ ++ +  +  
Sbjct: 406 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465

Query: 243 KIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +++ S  +L+++ ++     I  D    N +I+GF KA    +A  +L       L P  
Sbjct: 466 RVEESRMILERMREQ----GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY A I   S +G    A+  F E+   G+ P    Y AL++G+ K G + +A  V   
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           +    VL D  TYS+LI   +  G+   A  +  E++     PN+F Y+ +++G   +G 
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +  Q+L+EM   G+ PD   YN++ID   K   +  A   FD +   G+ P+ +T+  
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++D + K      A +L EEM  RG  P    YN+++N   ++E++E    L   M  +G
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDA-------IE-----------------CLEGLSDQAV 576
              + V++ TL++ Y +SG+  +A       IE                 C  G+  +A 
Sbjct: 762 F-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +  M+   + P+     SL++ +      +E  A+ + M   G++PD +TY  ++ A 
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880

Query: 637 IR 638
            R
Sbjct: 881 CR 882



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 226/509 (44%), Gaps = 63/509 (12%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALI 200
           A+ ++  ++K  L  +  L YS++I+ L R   L     + +   +  L      Y  L+
Sbjct: 400 AFELLDEMKKRKLAPTV-LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIE 257
           +A A+   +E++  ++ +MR+ G   D   Y+ +I    +  +++ +   L++ L +   
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER--- 515

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA---------------- 301
             ++  +       I G++KAG+   A R+       G+ P                   
Sbjct: 516 --RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573

Query: 302 -------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
                              TY+ +I  LS +G+  EA  +F EL+E GL P    YN+L+
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G  K G +  A  ++ EM   G+ PD  TY++LID    AG  E A+ +  ++E     
Sbjct: 634 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 693

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ ++ GY         FQ+L+EM   GV PD   YNV+++   K      A+  
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 753

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  ML +G    T+++NTLI+ + K G+   A  L EEM E+ + P   TY  +I+   +
Sbjct: 754 FQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 812

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA-FRV 581
                + KRL   M+ + ++P   TYT+L+  Y   G   +            V+A F  
Sbjct: 813 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE------------VSALFEE 860

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           M   G++P  +    +I+A+  +    EA
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREGNVMEA 889



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 211/458 (46%), Gaps = 30/458 (6%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L +A+N+    +   +    ++ + ++  L + NK++  L  K++  +   K+  D    
Sbjct: 170 LVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVE--LFWKVFDGMCAHKVLPDVYTY 227

Query: 269 NDVIVGFAKAGDASKAMR-FLGMAQGV----------------GLSPKTATYAAVITALS 311
            ++I    K G+   A R  L M +                  GL P   TY  +I    
Sbjct: 228 TNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 287

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              R+ EA+ +  E+ + GLKP    YNAL+ G+++ G ++ A  +  EM   G+  +  
Sbjct: 288 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 347

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            ++ L++    AG+ E A  +++EM     +P+S  YS ++ G+       R F++L EM
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K   + P    Y+V+I+   +   L    A    M+  G++P+ + + TL+  H K GR 
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + +  + E M+E+G  P    YN +I    + +R E+ +  L  M  + L PN  TY   
Sbjct: 468 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 527

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D Y ++G  +        ++D+  N    M + G+ P+     +LI    ++    EAF
Sbjct: 528 IDGYSKAGEME--------IADRYFNE---MLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +V +++    +  DV TY+ L+  L R  K H+ F  +
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 72/443 (16%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN------SGRTIEA-EA 321
           N VI  F    D+ + M FL  A  V L PK   +   + + ++       G  +E    
Sbjct: 153 NSVI--FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-------------ERS---- 364
           VF+ +    + P    Y  ++  + K+G +KDA+ V+ EM             +RS    
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G++PD +TY +LI+ +    R   A+++L EM     KP    Y+ ++ G+  +G+ ++ 
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F++  EM + G+E +   +N +++   K   +  A+     M+ +G+EPD+ T++ LI+ 
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           H +     RA EL +EM++R   P   TY+++IN L      +    +L  M   GL PN
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            V YTTL+  + + GR +++   LE            MR  G+ P     NSLI  F + 
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILER-----------MREQGILPDVFCYNSLIIGFCKA 499

Query: 605 QRDAEAFAVLQYMKEN-----------------------------------GLKPDVVTY 629
           +R  EA   L  M E                                    G+ P+V  Y
Sbjct: 500 KRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIY 559

Query: 630 TTLMKALIRVDKFHKVFSSYLFF 652
           T L++   +     + FS + F 
Sbjct: 560 TALIEGHCKEGNVTEAFSVFRFI 582



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 176/389 (45%), Gaps = 63/389 (16%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA----LLKG-------- 344
           SP +  +  ++ +    G  +EA  VF   K    +P   + N+    LLKG        
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 345 -----------------------YVKMGYLKDAEFVVSEM-------------ERS---- 364
                                  + K+G +KDA+ V+ EM             +RS    
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G++PD +TY +LI+ +    R   A+++L EM     KP    Y+ ++ G+  +G+ ++ 
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F++  EM + G+E +   +N +++   K   +  A+     M+ +G+EPD+ T++ LI+ 
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           H +     RA EL +EM++R   P   TY+++IN L      +    +L  M   GL PN
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            V YTTL+  + + GR +++   LE            MR  G+ P     NSLI  F + 
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILER-----------MREQGILPDVFCYNSLIIGFCKA 499

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +R  EA   L  M E  L+P+  TY   +
Sbjct: 500 KRMEEARTYLMEMLERRLRPNAHTYGAFI 528



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 186/382 (48%), Gaps = 14/382 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+LIH L R+ K++EAF +    Q + L P   TYN+LIS   +  +++KA  L+ +M 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G + D + Y+++I  L +  +I+ +  + L+ +IE   +  +      ++ G+ K+ +
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERA--KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A + L      G+ P    Y  ++       +  +A  +F+E+ E G    T ++N 
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNT 770

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++GY K G L++A  ++ EM     +P+  TY+ LID    AG    A+ +  EM+  +
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  Y+ +L GY + G       + +EM + G+EPD   Y VMID + +   +  A 
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890

Query: 461 AAFDRMLSEGIEPDT-----ITWNTLIDCHFK-CGRYDRAEELFEEMQERGYFPCTTTYN 514
              D +L +G+   +     +   ++I   F+  G  D A E+   M + G+   TT+  
Sbjct: 891 KLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLG 950

Query: 515 IMINLLGEQERWEDVKRLLGNM 536
            +++        ED   LL  M
Sbjct: 951 DLVDGNQNGANSEDSDNLLKQM 972



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 112/293 (38%), Gaps = 41/293 (13%)

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           ++K     +  PNS I+  ++  YR  G       V    K+    P     N ++    
Sbjct: 141 IVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLL 200

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY-----------------DRA 494
           K N +      FD M +  + PD  T+  +I  H K G                   D A
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEA 260

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL   M ++G  P   TY+I+IN    ++R  + K +L  M   GL P  +TY  L+D 
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           + + G  + A                          C  G  ++A+   + M   G++P 
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           +   + LI      Q  A AF +L  MK+  L P V+TY+ ++  L R     
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 261/554 (47%), Gaps = 38/554 (6%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++LL  LC  +    +++L + +     + N+     + ++ L++ L R  ++ EA  L
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV-----VTFTTLMNGLCREGRIVEAVAL 206

Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLT 239
             R      + T +TY  ++    +  D   AL+L+ KM +  +   + + YS +I SL 
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC 266

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  +   S  Q L+ E++   I  D    N +IVGF  +G  S A + L       +SP 
Sbjct: 267 KDGR--HSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A+I A    G+  EAE +++E+   G+ P T  Y++++ G+ K   L  AE +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFY 384

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  P+  T++ LID Y  A R +    +L EM  +    ++  Y+ ++ G+   G
Sbjct: 385 LMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS----------- 468
           +      +L+EM SSG+ PD    + ++D       L  A+  F  M             
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+EPD  T+N LI      G++  AEEL+EEM  RG  P T TY+ MI+ L +Q R ++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++  +M ++   PNVVT+TTL++ Y ++GR DD +E            F  M   G+ 
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE-----------LFCEMGRRGIV 613

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            + +   +LI  F +      A  + Q M  +G+ PD +T   ++  L   ++  +  + 
Sbjct: 614 ANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAM 673

Query: 649 YLFFNIYKMLSYSG 662
                +   LS+ G
Sbjct: 674 LEKLQMSMDLSFGG 687



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 216/470 (45%), Gaps = 38/470 (8%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE A++L S M +       +++  ++  + R  + D  L+  LY+++E  +I  D    
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD--LVISLYQKMERKQIRCDIYSF 117

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I  F        A+   G    +GL P   T+  ++  L    R  EA  +F ++ E
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P    +  L+ G  + G + +A  ++  M   G+ P + TY  ++D     G   S
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237

Query: 389 ARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  +L++M E+SH  PN  IYS I+      G       +  EM+  G+ PD   YN MI
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F        A      ML   I PD +T+N LI+   K G++  AEEL++EM  RG  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T TY+ MI+   +Q R +  + +   M  +G  PN++T+ TL+D Y  + R DD +E 
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417

Query: 568 LEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           L  +++                         A++  + M + GL P  +  ++L++   +
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 604 DQ--RDA-EAFAVLQYMKE--------NGLKPDVVTYTTLMKALIRVDKF 642
           +   +DA E F V+Q  K+        NG++PDV TY  L+  LI   KF
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 188/436 (43%), Gaps = 23/436 (5%)

Query: 116 KLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           K+ E    +P   ++ +++ +LC      D A  + + +Q+  + +     Y+ +I    
Sbjct: 244 KMEEISHIIPNVVIYSAIIDSLCKDGRHSD-AQNLFTEMQEKGI-FPDLFTYNSMIVGFC 301

Query: 175 RSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            S +  +A  L Q    ++++P  +TYNALI+A  +     +A  L  +M   G   + I
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            YS +I    + N++D++  + ++  +       +    N +I G+  A      M  L 
Sbjct: 362 TYSSMIDGFCKQNRLDAA--EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                GL   T TY  +I      G    A  + +E+  SGL P     + LL G    G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 350 YLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            LKDA  +   M++S           GV PD  TY++LI    N G++  A  + +EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P++  YS ++ G   +       Q+   M S    P+   +  +I+ + K   +  
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            +  F  M   GI  + IT+ TLI C F K G  + A ++F+EM   G +P T T   M+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI-CGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658

Query: 518 NLLGEQERWEDVKRLL 533
             L  +E  +    +L
Sbjct: 659 TGLWSKEELKRAVAML 674



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 12/303 (3%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  + S+M RS  LP    +  L+       R +    + ++ME   
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + + + ++ ++  +    +         ++   G+ PD   +N ++      + +  A+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M      P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 521 GEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            +         LL  M     ++PNVV Y+ ++D   + GR  D           A N F
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD-----------AQNLF 278

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G+ P     NS+I  F    R ++A  +LQ M E  + PDVVTY  L+ A ++ 
Sbjct: 279 TEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338

Query: 640 DKF 642
            KF
Sbjct: 339 GKF 341


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 244/525 (46%), Gaps = 26/525 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 178

Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            L       R   +P   ++Y  +I+   +  D +KA +   +M   G   D + Y+ +I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  D    N ++ G+  +G   +A+ FL   + 
Sbjct: 239 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY+ ++  L  +GR +EA  +F+ + + GLKP    Y  LL+GY   G L +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD + +S+LI AYA  G+ + A +V  +M      PN+  Y  ++ 
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +      ++M   G+ P    YN +I      N    A      ML  GI  
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +TI +N++ID H K GR   +E+LFE M   G  P   TYN +IN      + ++  +LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M + GL PN VTY+TL++ Y +  R +DA+             F+ M + G+ P  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALV-----------LFKEMESSGVSPDIIT 583

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 224/485 (46%), Gaps = 18/485 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNL-MSKM 219
           Y ILI    R+ +L   F     ++ +  R+  + +  L+     +     A+++ + +M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   +  +Y+++++ L   N+   +L L  +  +        D      VI GF K 
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD+ KA          G+ P   TY ++I AL  +    +A  V   + ++G+ P    Y
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N++L GY   G  K+A   + +M   GV PD  TYSLL+D     GR   AR +   M  
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP    Y  +L GY  +G       +L  M  +G+ PD + ++++I  + K   +  
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F +M  +G+ P+ +T+  +I    K GR + A   FE+M + G  P    YN +I+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    +WE  + L+  M  +G+  N + + +++D +           C EG   ++   
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEGRVIESEKL 498

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F +M   G+KP+ +  N+LIN +    +  EA  +L  M   GLKP+ VTY+TL+    +
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 639 VDKFH 643
           + +  
Sbjct: 559 ISRME 563



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 210/463 (45%), Gaps = 49/463 (10%)

Query: 166 YSILIHALGRSE---KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I AL +++   K  E      +  + P  +TYN+++     +   ++A+  + KMR
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293

Query: 221 QDGYHCDFINYSLVIQSLTRTNK-------IDSSLLQKLYKEIEC--------------- 258
            DG   D + YSL++  L +  +        DS   + L  EI                 
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353

Query: 259 -----------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                      + I  D  + + +I  +AK G   +AM      +  GL+P   TY AVI
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L  SGR  +A   FE++ + GL P    YN+L+ G       + AE ++ EM   G+ 
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            +   ++ +ID++   GR   +  + + M     KPN   Y+ ++ GY   G+     ++
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L  M S G++P+T  Y+ +I+ + K + +  A+  F  M S G+ PD IT+N ++   F+
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             R   A+EL+  + E G     +TYNI+++ L + +  +D  ++  N+    L     T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +  ++D   + GR           +D+A + F    ++GL P+
Sbjct: 654 FNIMIDALLKVGR-----------NDEAKDLFVAFSSNGLVPN 685



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 6/348 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ LI A A+   +++A+ + SKMRQ G + + + Y  VI  L ++ +++ ++L   Y 
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML---YF 429

Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E   D+    G ++ N +I G        +A   +      G+   T  + ++I +    
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR IE+E +FE +   G+KP    YN L+ GY   G + +A  ++S M   G+ P+  TY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI+ Y    R E A ++ KEME S   P+   Y+ IL G           ++   +  
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG + +   YN+++    K      A+  F  +    ++ +  T+N +ID   K GR D 
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
           A++LF      G  P   TY +M  N++G Q   E++ +L  +M   G
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 716



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 174/407 (42%), Gaps = 30/407 (7%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVG--LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           LN  +   A+   A+   R+  MA+     ++P   TY  +I     +GR     A    
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           + + G +    A+  LLKG        DA + V+  M   G +P+  +Y++L+    +  
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDEN 172

Query: 385 RWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           R + A  +L  M       + P+   Y+ ++ G+   G+  + +    EM   G+ PD  
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +I    K   +  AM   + M+  G+ PD +T+N+++  +   G+   A    ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G  P   TY+++++ L +  R  + +++  +M  +GL P + TY TL+  Y   G  
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352

Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +    L                        +G  DQA+  F  MR  GL P+ +   ++
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           I    +  R  +A    + M + GL P  + Y +L+  L   +K+ +
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 15/335 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
           +++SL+  LC+ N   + A  ++  +    +C +     SI+      GR   SEKL+E 
Sbjct: 443 VYNSLIHGLCTCNKW-ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE- 500

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             L  R  + P  +TYN LI+       +++A+ L+S M   G   + + YS +I    +
Sbjct: 501 --LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            ++++ +L+  L+KE+E   +  D    N ++ G  +    + A          G   + 
Sbjct: 559 ISRMEDALV--LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY  ++  L  +  T +A  +F+ L    LK   + +N ++   +K+G   +A+ +   
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
              +G++P+  TY L+ +     G  E    +   ME +    +S + + I+     RGE
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736

Query: 421 WQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             R  T+  + + K   +E  T    + + + GKY
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + + +T L+       R  DA++ 
Sbjct: 85  PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M   G  P+  + N L+    ++ R  EA  +L  M ++   G  P
Sbjct: 145 V----------LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+YTT++    +     K +S+Y
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTY 219


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 259/569 (45%), Gaps = 53/569 (9%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEA 182
           P  + ++++ N   +   +D AY++   +       +Y  +   L  A  + R+E +++ 
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++ +  +   +TYN +I    +  +++ A  +  KM   G     + Y+ +I  L +  
Sbjct: 251 -MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQ 309

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D +  + +++++    ++ D    N +I G  KA    KA          G+ P   T
Sbjct: 310 AVDRA--EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L  +     AE VF+++ + G+KP    YN L+ GY+  G  ++    + EM 
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              + PD  TY LL+D     G+   AR +   M     KP+  IY  +L GY  +G   
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L  M ++G+ P+   +N +I  + K   +   M  F +M  +G+ P+ +T+ TLI
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547

Query: 483 DCHFKCGRYD-----------------------------------RAEELFEEMQERGYF 507
           D   K GR D                                   + EELF EM  +G  
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIR 607

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    +N ++  L ++ R  + +RL+ +M   GL P+V++Y TL+D +  + R D+A++ 
Sbjct: 608 PDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL 667

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+G           M + GLKP+ ++ N+L++ + +  R   A+ + + M   G+ P V 
Sbjct: 668 LDG-----------MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716

Query: 628 TYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           TY T++  L R  +F +  +  L+ N+ K
Sbjct: 717 TYNTILNGLFRSGRFSE--ARELYVNMIK 743



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 238/517 (46%), Gaps = 25/517 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---- 185
           + LLK LC +    +  + ++  + +   C    + Y+ L+  L    +  EA  L    
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVG-CRLGVVSYNTLLKGLCDRRRAEEARELLHMM 181

Query: 186 --SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
              Q    +P  ++YN +I+       ++KA +L  +M   G   D + Y+ +I  L + 
Sbjct: 182 VDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKA 238

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            ++D +  + +++++    ++ +    N +I G  KA +   A          G+ P   
Sbjct: 239 QEVDRA--EDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNV 296

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I  L  +     AE VF+++ + G+KP    YN ++ G  K   +  AE V  +M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              GV PD  TY+++ID    A   + A  V ++M     KPN+  Y+ ++ GY   G+W
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +   Q +KEM +  +EPD   Y +++D   K    + A + FD M+ +GI+P    +  +
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +  + K G      +L   M   G  P    +N +I    ++   ++V  +   M+ QGL
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNVVTY TL+D   + GR DD           AV  F  M  +G+ P+N+  NSL+   
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDD-----------AVLQFNQMINEGVTPNNVVFNSLVYGL 585

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               +  +   +   M   G++PD+V + T++  L +
Sbjct: 586 CTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 229/517 (44%), Gaps = 26/517 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYEA 182
           +++++  LC +  +ID A  V   +    +     L Y+I+I  L       R+E +++ 
Sbjct: 333 YNTIIDGLCKA-QAIDKAEGVFQQMIDKGV-KPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++ +  +    TYN LI         E+ +  + +M       D   Y L++  L +  
Sbjct: 391 -MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449

Query: 243 KIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           K +   SL   + ++     + + G +L+    G+ K G  S+    L +    G+SP  
Sbjct: 450 KCNEARSLFDSMIRKGIKPSVTIYGIMLH----GYGKKGALSEMHDLLNLMVANGISPNH 505

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             +  VI A +      E   +F ++K+ GL P    Y  L+    K+G + DA    ++
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   GV P+   ++ L+       +WE    +  EM     +P+   ++ +L      G 
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                +++  M   G++PD   YN +ID     + +  A+   D M+S G++P+ +++NT
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+  + K GR D A  LF EM  +G  P   TYN ++N L    R+ + + L  NM    
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            L ++ TY+ ++D + ++  FD+A +  + L               L+   +  N +I+ 
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM-----------DLQLDIITFNIMIDG 794

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             +  R  +A  +   +  NGL P VVTY  + + LI
Sbjct: 795 LFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLI 831



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 177/385 (45%), Gaps = 7/385 (1%)

Query: 165 LYSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y I++H  G+     ++++   L     ++P    +N +I A A+   +++ +++  KM
Sbjct: 472 IYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM 531

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +Q G   + + Y  +I +L +  ++D ++LQ  + ++  + +  +  + N ++ G     
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ--FNQMINEGVTPNNVVFNSLVYGLCTVD 589

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              K           G+ P    +  V+  L   GR +EA  + + +   GLKP   +YN
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+     + +A  ++  M  +G+ P+  +Y+ L+  Y  AGR ++A  + +EM   
Sbjct: 650 TLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ IL G    G +    ++   M  S        Y++++D F K NC   A
Sbjct: 710 GVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEA 769

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  + S  ++ D IT+N +ID  FK GR + A +LF  +   G  P   TY ++   
Sbjct: 770 FKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAEN 829

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPN 544
           L E+   E++  L   M   G  PN
Sbjct: 830 LIEEGSLEELDCLFSVMEKSGTAPN 854



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 216/514 (42%), Gaps = 55/514 (10%)

Query: 166 YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH   + G+ E++ +         L P   TY  L+    +N    +A +L   M 
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y +++    +   +  S +  L   +  + I  + ++ N VI  +AK   
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGAL--SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520

Query: 281 ASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + M  F+ M Q  GLSP   TY  +I AL   GR  +A   F ++   G+ P    +N
Sbjct: 521 IDEVMHIFIKMKQQ-GLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFN 579

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G   +   +  E +  EM   G+ PD   ++ ++      GR   AR ++  M   
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM 639

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   Y+ ++ G+          ++L  M S+G++P+   YN ++  + K   + +A
Sbjct: 640 GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNA 699

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM--QERGYFPCT------- 510
              F  ML +G+ P   T+NT+++  F+ GR+  A EL+  M    + +  CT       
Sbjct: 700 YCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759

Query: 511 --------------------------TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                                      T+NIMI+ L +  R ED   L   + A GL+P+
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           VVTY  + +   + G  ++ ++CL          F VM   G  P++  LN+LI    + 
Sbjct: 820 VVTYRLIAENLIEEGSLEE-LDCL----------FSVMEKSGTAPNSHMLNALIRKLLDR 868

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                A A L  + E     +  T + L+    R
Sbjct: 869 GEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 172/395 (43%), Gaps = 62/395 (15%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           AA+  A S +    +A  +F+EL         +A N LL    +      ++  VS   R
Sbjct: 12  AAIGRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNR 71

Query: 364 ------SGVLPDEHTYSLLIDAYANAGR---------------W---------------- 386
                 + V PD  TYS++I  +   GR               W                
Sbjct: 72  MLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCD 131

Query: 387 -----ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM---KSSGVEP 438
                E+  ++L++M     +     Y+ +L G  DR   +   ++L  M   + S   P
Sbjct: 132 TKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSP 191

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   YN++I+ F     +  A + F   L  G+ PD +T+NT+ID   K    DRAE++F
Sbjct: 192 DVVSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVF 248

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           ++M E+G  P   TYN +I+ L + +  +  + +   M  +G+ P+ VTY T++D     
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGL--- 305

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C     D+A   F+ M   G+KP ++  N++I+   + Q   +A  V Q M 
Sbjct: 306 --------CKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMI 357

Query: 619 ENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           + G+KPD +TYT ++  L +   VD+   VF   +
Sbjct: 358 DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI 392


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 245/535 (45%), Gaps = 37/535 (6%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFL 184
           SLLK L   +   + A A++ W  K     +  L   +++ ALGR  +      L +   
Sbjct: 109 SLLKAL-ELSGHWEWALALLRWAGKEGAADASAL--EMVVRALGREGQHDAVCALLDETP 165

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L    RL    Y  ++ A +R    E+AL L +++R+ G     + Y++V+    R  + 
Sbjct: 166 LPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRS 225

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
              ++  L  E+    +E DG   + VI    + G   +A+ F    +  G +P   TY 
Sbjct: 226 WPRIV-ALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 284

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A++     +G   EA  V  E++++G +P    YN L   Y + G+ ++A   +  M   
Sbjct: 285 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASK 344

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+LP+  TY+ ++ AY N G+ + A  +  +M+ +   PN   Y+ +L     +  +   
Sbjct: 345 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 404

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L EM  SG  P+   +N M+   GK     +     + M S G+E    T+NTLI  
Sbjct: 405 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 464

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + +CG    A +++ EM   G+ PC TTYN ++N+L  Q  W   + ++  MR +G  PN
Sbjct: 465 YGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 524

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEG--------------LSDQAVNAFRVMRTDGLK-- 588
             +Y+ L+  Y + G     I  +E               L    +  F+  R DG++  
Sbjct: 525 EQSYSLLLQCYAKGGNV-AGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETA 583

Query: 589 ----------PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                     P  +  NS+++ + ++   ++A  V   +K +GL PD++TY +LM
Sbjct: 584 FQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLM 638



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/579 (23%), Positives = 244/579 (42%), Gaps = 100/579 (17%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+  E F   +RQ + P  +TYN ++    R      + + L+ +M
Sbjct: 177 YTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEM 236

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQ-------- 250
           R  G   D    S VI +  R   +D                     ++LLQ        
Sbjct: 237 RAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNY 296

Query: 251 ----KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               ++  E+E +  + D    N++   +A+AG   +A R L      GL P   TY  V
Sbjct: 297 TEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTV 356

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +TA  N G+  EA A+F+++K++G  P    YN +L    K         ++ EM RSG 
Sbjct: 357 MTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGC 416

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  T++ ++      G  +    VL+ M     + +   Y+ ++A Y   G     F+
Sbjct: 417 TPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFK 476

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH- 485
           +  EM S+G  P    YN +++   +      A +   +M ++G +P+  +++ L+ C+ 
Sbjct: 477 MYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYA 536

Query: 486 -----------------------------------FKCGRYDRAEELFEEMQERGYFPCT 510
                                              FKC R D  E  F+E++ RGY P  
Sbjct: 537 KGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDL 596

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR---------- 560
             +N M+++  +   +     +  +++  GL P+++TY +L+D+Y +             
Sbjct: 597 VIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQ 656

Query: 561 -------------FDDAIE--CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                        ++  I   C +GL  +A      M  DG+ P  +  ++L+  +   +
Sbjct: 657 LKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLE 716

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             +EA  V+ YM ++GLKP  +TY  ++++  R  +F +
Sbjct: 717 MFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEE 755



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 188/406 (46%), Gaps = 9/406 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A G   K+ EA  L  + + T       TYN ++    +       L ++ +M 
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS 412

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + ++ ++    +    D   + ++ + +    +EL     N +I  + + G 
Sbjct: 413 RSGCTPNRVTWNTMLAVCGKRGMED--YVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGS 470

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A +        G +P   TY A++  LS  G    A+++  +++  G KP  ++Y+ 
Sbjct: 471 RTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSL 530

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSG-VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           LL+ Y K G +     + +E+  SG V P       L+ A     R +      +E++  
Sbjct: 531 LLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKAR 590

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+  I++ +L+ Y   G + +  +V   +K SG+ PD   YN ++D + K +    A
Sbjct: 591 GYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEA 650

Query: 460 MAAFDRM-LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               +++  S+ ++PD +++NT+I+   K G    A+ +  EM   G  PC  TY+ ++ 
Sbjct: 651 EKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVG 710

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
                E + + + ++G M   GL P  +TY  +V+ Y ++ RF++A
Sbjct: 711 GYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEA 756



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 16/229 (6%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF--DRMLSEGIEPDTI 476
           G W+    +L+     G   D     +++   G+    H A+ A   +  L  G   D  
Sbjct: 118 GHWEWALALLRWAGKEGAA-DASALEMVVRALGREG-QHDAVCALLDETPLPPGSRLDVR 175

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGN 535
            + T++    + GRY+RA ELF E++ +G  P   TYN+++++ G   R W  +  LL  
Sbjct: 176 AYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDE 235

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           MRA G+ P+  T +T++           A  C +GL D+AV  F  ++  G  P  +  N
Sbjct: 236 MRAAGVEPDGFTASTVI-----------AACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 284

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +L+  FG+     EA  VL  M++NG +PD VTY  L     R   F +
Sbjct: 285 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEE 333



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 177/421 (42%), Gaps = 67/421 (15%)

Query: 74  VLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLL 133
           VL +  ++  FT +L  L E S S        +P   NRV               W+++L
Sbjct: 391 VLGMLGKKSRFTVMLEMLGEMSRS------GCTP---NRVT--------------WNTML 427

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR--- 190
             +C      D    V+  ++   +  S +  Y+ LI A GR      AF +        
Sbjct: 428 A-VCGKRGMEDYVTRVLEGMRSCGVELSRDT-YNTLIAAYGRCGSRTNAFKMYNEMTSAG 485

Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS----------- 237
            TP   TYNAL++  +R  D   A +++SKMR  G+  +  +YSL++Q            
Sbjct: 486 FTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIA 545

Query: 238 -----------------LTRTNKIDSSLLQKL------YKEIECDKIELDGQLLNDVIVG 274
                            + RT  I +   ++L      ++E++      D  + N ++  
Sbjct: 546 AIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSI 605

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES-GLKP 333
           +AK G  SKA       +  GLSP   TY +++   +    + EAE +  +LK S  +KP
Sbjct: 606 YAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKP 665

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +YN ++ G+ K G +K+A+ V+SEM   G+ P   TY  L+  Y++   +  AR V+
Sbjct: 666 DVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVI 725

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID--TFG 451
             M     KP    Y R++  Y     ++     L E+  + ++ D       I+   FG
Sbjct: 726 GYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAYIEDAQFG 785

Query: 452 K 452
           +
Sbjct: 786 R 786


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 18/489 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L+Y+ +I+AL +   + +A  + ++     ++P   TY ++I    R  DL+ AL + ++
Sbjct: 216 LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L  + +++ +    L +E+    I          I+     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAF--DLIREMILHGILPTAHTCTGPIIALCDM 333

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R     +  G  P   TY A+I+ L  SG    A  +F  +   G+ P T  Y
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   V+   +K A  V++ M R+G  P+  TY+ +I  Y   G  + A +V+  M  
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N   Y+ I+ GY D G      ++L  M+  G +PD   Y  +I  F K + +  
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+ +G+ P+ +T+  LID + K  + D A  L E M+  G  P   TYN++I+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +Q  +   + L   M  +G+ PNVVTYT ++D             C  G +  A+  
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL-----------CKNGSTSLALEM 622

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P+ L  +SLI A G++ +  EA  +   ++ +GL PD +TY  +++A I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 639 VDKFHKVFS 647
             K    F+
Sbjct: 683 SGKVEHAFN 691



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 244/554 (44%), Gaps = 32/554 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEAFLLS 186
           + +L+  LC S   ++ A+ ++  +  H +  +       +I    +G  E  +  F+  
Sbjct: 288 YSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           + +   P   TY ALIS    +  L+ A+ L  +M +DG   + + Y+ +I  L    +I
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 245 DSS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             + ++  L     C     +    N++I G+   GD  KAM  +      G S    TY
Sbjct: 407 KYAFVVLNLMGRNGCSP---NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I    +SG T  A  + + +++ G KP   +Y  L+ G+ K+  ++ A  + +EM  
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+E TY+ LID Y    + ++A  +L+ M+ S  +PN   Y+ ++ G   +  +  
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ K M   G+ P+   Y  MID   K      A+  F++M+ +G  P+ +T+++LI 
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G+ + AE LF E++  G  P   TY  MI       + E     LG M   G  P
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDG------------LKP- 589
            + TY  L  I G    +  A + L  L D   N +F    TD             L P 
Sbjct: 704 TLWTYGVL--IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPG 761

Query: 590 -SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            S    N+L++      R  EA  +L  M   GL PD   Y +L+ +L+RV         
Sbjct: 762 LSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD----- 816

Query: 649 YLFFNIYKMLSYSG 662
            L   ++K +S  G
Sbjct: 817 -LAMGVFKHMSTQG 829



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 11/368 (2%)

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           ++ M FL M    GL      Y+A++  LS  G T      +  +   G++P    YNA+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    K G + DAE ++ ++  S + PD  TY+ +I  +      +SA  V  +M     
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN+  YS ++ G  D G     F +++EM   G+ P  H     I       C   A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M ++G EP+  T+  LI      G    A  LF  M   G FP T TYN +IN+L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           E  R +    +L  M   G  PN+VTY  ++  Y           C+ G   +A+     
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY-----------CILGDPKKAMLVMNN 450

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G   + +  N++I  + +      A  +L  M++ G KPD  +YT L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 642 FHKVFSSY 649
               F  +
Sbjct: 511 MESAFGLF 518



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 227/576 (39%), Gaps = 57/576 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL---L 185
           + +L+  LC S   + +A  +   + +  + +   + Y+ LI+ L  + ++  AF+   L
Sbjct: 358 YTALISGLCVS-GLLKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R   +P  +TYN +I       D +KA+ +M+ M Q G+  + + Y+ +I+    +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 244 IDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             S+L +  L ++  C   E       ++I GF K      A          GL P   T
Sbjct: 476 TTSALRILDLMRDGGCKPDEWS---YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I       +   A ++ E +K SG +P  + YN L+ G  K      AE +   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+  TY+ +ID     G    A  +  +M      PN   YS ++      G+ +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +  E++  G+ PD   Y  MI+ +     + HA     RM+  G +P   T+  LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 483 ----------------------DCHF--KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                 +C F  +    D    +  ++ E          N +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW +   LLG+M +QGL P+   Y +L+       R  +         D A+  
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL---CSLLRVRNV--------DLAMGV 821

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M T G +        LI A  +  R  EA    + M      PD V    L+  L+R
Sbjct: 822 FKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881

Query: 639 VDKFHKVFSSYLF----------FNIYKMLSYSGEK 664
            D +  +   +L           F+IY +L+    K
Sbjct: 882 -DGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 177/466 (37%), Gaps = 70/466 (15%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++K  C S ++   A  ++  L +   C   E  Y+ LI    +  K+  AF L   
Sbjct: 463 YNTIIKGYCDSGNTTS-ALRILD-LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 520

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L P  +TY ALI    +++ L+ A +L+  M++ G   +   Y+++I  LT+ N 
Sbjct: 521 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 580

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  ++L K +  + I  +      +I G  K G  S A+         G  P   TY
Sbjct: 581 FSGA--EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA--------- 354
           +++I AL   G+  EAE +F EL+  GL P    Y  +++ Y+  G ++ A         
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698

Query: 355 -------------------EFVVSEMERSGVLPDE------------------------- 370
                              E+++++ +R   LPD                          
Sbjct: 699 AGCQPTLWTYGVLIKGLKNEYLLAD-QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAE 757

Query: 371 -------HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                     + L+   + AGRW  A  +L  M      P+   Y+ +L           
Sbjct: 758 LDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V K M + G E   + Y  +I    + +    A   F+ ML     PD +    LID
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
              + G  D   E    M+ R Y P    Y I+     ++  W+ V
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHV 923



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 22/344 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLL 185
           + +++  LC  N S  LA  + + + +   C    L YS LI ALG+  K+ EA   F  
Sbjct: 603 YTAMIDGLCK-NGSTSLALEMFNKMIEQG-CLPNLLTYSSLIRALGQEGKVEEAENLFAE 660

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +R  L P  +TY  +I A   +  +E A N + +M + G       Y ++I+ L     
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG-DASKAMRFLGMAQGVGLSPKTAT 302
           +    L  L              ++ +   G+     DA   M         GLS +   
Sbjct: 721 LADQRLAAL------------PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
             A+++ LS +GR  EA  +   +   GL P  +AYN+LL   +++  +  A  V   M 
Sbjct: 769 --ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMS 826

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G     + Y  LI A     R + ARI  + M +    P+  + + ++ G    G   
Sbjct: 827 TQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKD 886

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
              + L  M++    P  H Y ++     K     H      ++
Sbjct: 887 LCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCITKV 930


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 18/489 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L+Y+ +I+AL +   + +A  + ++     ++P   TY ++I    R  DL+ AL + ++
Sbjct: 216 LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L  + +++ +    L +E+    I          I+     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAF--DLIREMILHGILPTAHTCTGPIIALCDM 333

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R     +  G  P   TY A+I+ L  SG    A  +F  +   G+ P T  Y
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   V+   +K A  V++ M R+G  P+  TY+ +I  Y   G  + A +V+  M  
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N   Y+ I+ GY D G      ++L  M+  G +PD   Y  +I  F K + +  
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+ +G+ P+ +T+  LID + K  + D A  L E M+  G  P   TYN++I+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +Q  +   + L   M  +G+ PNVVTYT ++D             C  G +  A+  
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL-----------CKNGSTSLALEM 622

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P+ L  +SLI A G++ +  EA  +   ++ +GL PD +TY  +++A I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 639 VDKFHKVFS 647
             K    F+
Sbjct: 683 SGKVEHAFN 691



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 244/554 (44%), Gaps = 32/554 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEAFLLS 186
           + +L+  LC S   ++ A+ ++  +  H +  +       +I    +G  E  +  F+  
Sbjct: 288 YSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           + +   P   TY ALIS    +  L+ A+ L  +M +DG   + + Y+ +I  L    +I
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 245 DSS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             + ++  L     C     +    N++I G+   GD  KAM  +      G S    TY
Sbjct: 407 KYAFVVLNLMGRNGCSP---NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I    +SG T  A  + + +++ G KP   +Y  L+ G+ K+  ++ A  + +EM  
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+E TY+ LID Y    + ++A  +L+ M+ S  +PN   Y+ ++ G   +  +  
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ K M   G+ P+   Y  MID   K      A+  F++M+ +G  P+ +T+++LI 
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G+ + AE LF E++  G  P   TY  MI       + E     LG M   G  P
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDG------------LKP- 589
            + TY  L  I G    +  A + L  L D   N +F    TD             L P 
Sbjct: 704 TLWTYGVL--IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPG 761

Query: 590 -SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            S    N+L++      R  EA  +L  M   GL PD   Y +L+ +L+RV         
Sbjct: 762 LSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD----- 816

Query: 649 YLFFNIYKMLSYSG 662
            L   ++K +S  G
Sbjct: 817 -LAMGVFKHMSTQG 829



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 11/368 (2%)

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           ++ M FL M    GL      Y+A++  LS  G T      +  +   G++P    YNA+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    K G + DAE ++ ++  S + PD  TY+ +I  +      +SA  V  +M     
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN+  YS ++ G  D G     F +++EM   G+ P  H     I       C   A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M ++G EP+  T+  LI      G    A  LF  M   G FP T TYN +IN+L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           E  R +    +L  M   G  PN+VTY  ++  Y           C+ G   +A+     
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY-----------CILGDPKKAMLVMNN 450

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G   + +  N++I  + +      A  +L  M++ G KPD  +YT L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 642 FHKVFSSY 649
               F  +
Sbjct: 511 MESAFGLF 518



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 226/576 (39%), Gaps = 57/576 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL---L 185
           + +L+  LC S   + +A  +   + +  + +   + Y+ LI+ L  + ++  AF+   L
Sbjct: 358 YTALISGLCVS-GLLKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R   +P  +TYN +I       D +KA+ +M+ M Q G+  + + Y+ +I+    +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 244 IDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             S+L +  L ++  C   E       ++I GF K      A          GL P   T
Sbjct: 476 TTSALRILDLMRDGGCKPDEWS---YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I       +   A ++ E +K SG +P  + YN L+ G  K      AE +   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+  TY+ +ID     G    A  +  +M      PN   YS ++      G+ +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +  E++  G+ PD   Y  MI+ +     + HA     RM+  G +P   T+  LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 483 ----------------------DCHF--KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                 +C F  +    D    +  ++ E          N +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW +   LLG+M +QGL P+   Y +L+    +    D            A+  
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD-----------LAMGV 821

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M T G +        LI A  +  R  EA    + M      PD V    L+  L+R
Sbjct: 822 FKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881

Query: 639 VDKFHKVFSSYLF----------FNIYKMLSYSGEK 664
            D +  +   +L           F+IY +L+    K
Sbjct: 882 -DGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 228/460 (49%), Gaps = 12/460 (2%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +++ ++P  +TYN LI A  +   +++A+ L+  M   G   + I+Y+ VI  L    ++
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM 293

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
             S + +L +E+    +  D    N ++ GF K G+  + +  L    G GLSP   TY 
Sbjct: 294 --SEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYT 351

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I  +  +G    A  +F++++  GL+P  + Y  L+ G+ + G + +A  V+SEM  S
Sbjct: 352 TLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS 411

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  P   TY+ L+  Y   GR + A  +L+ M      P+   YS ++AG+    E  + 
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           FQ+ +EM   GV PDT  Y+ +I        L  A   F  M+  G+ PD +T+ +LI+ 
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           +   G   +A  L +EM +RG+ P   TY+++IN L ++ R +  KRLL  +  +  +P+
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPD 591

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            VTY TL++    S     ++E      C++GL ++A   F+ M     KP+    N +I
Sbjct: 592 DVTYNTLIE--NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +         +A+ +   ++ +      V    L+KAL R
Sbjct: 650 HGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 194/384 (50%), Gaps = 16/384 (4%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL-----SNSGRTIEAEAVFEE 325
           V+   ++ G   KA+  L +A   G +P   +Y AV+ AL     SN     +AE VF +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +  +G+ P    YN +++G V  G L+     + +ME+ G+ P+  TY+ LIDA     +
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +L+ M V     N   Y+ ++ G   +G      ++++EM+  G+ PD   YN 
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +++ F K   LH  +     M+ +G+ P+ +T+ TLI+C  K G   RA E+F++M+ RG
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TY  +I+   ++    +  ++L  M   G  P+VVTY  LV  Y   GR  +A+
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             L G+ ++           GL P  ++ +++I  F  ++   +AF + + M E G+ PD
Sbjct: 438 GILRGMVER-----------GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPD 486

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
            VTY++L++ L    K  + F  +
Sbjct: 487 TVTYSSLIQGLCLQQKLVEAFDLF 510



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 162/341 (47%), Gaps = 29/341 (8%)

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY-----ANAGRWESA 389
           +  ++ ++K   ++G++  A  ++    R G  P   +Y+ ++DA      +N   ++ A
Sbjct: 132 SAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDA 191

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V ++M  +   PN + Y+ I+ G   +G+ ++    +++M+  G+ P+   YN +ID 
Sbjct: 192 ERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   +  AMA    M   G+  + I++N++I+     GR     EL EEM+ +G  P 
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TYN ++N   ++        LL  M  +GL PNVVTYTTL++   ++G    A+E   
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C +GL ++A      M   G  PS +  N+L++ +    
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           R  EA  +L+ M E GL PDVV+Y+T++    R  +  K F
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 162/402 (40%), Gaps = 28/402 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ + ++  L  A  +  + R+  L     TY  LI    +   + +A  ++S+M 
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 221 QDGYHCDFINYSLVIQS---LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             G+    + Y+ ++     L R  +    L   + + +  D +       + VI GF +
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY-----STVIAGFCR 464

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             +  KA +        G+ P T TY+++I  L    + +EA  +F E+   GL P    
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVT 524

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+  Y   G L  A  +  EM + G LPD  TYS+LI+      R + A+ +L ++ 
Sbjct: 525 YTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLF 584

Query: 398 VSHAKPNSFIYSRIL---------------AGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
              + P+   Y+ ++                G+  +G      +V K M     +P+   
Sbjct: 585 YEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAI 644

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN+MI    +   +H A   +  +        T+    L+    + G  D    L + + 
Sbjct: 645 YNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL 704

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                       +++ +  ++   + V  +L  M   GLLP+
Sbjct: 705 RSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 53/262 (20%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L   +KL EAF L +   R+ L P  +TY +LI+A   + +L KAL L  +M 
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549

Query: 221 QDGYHCDFINYSLVIQSLTRT--NKIDSSLLQKL-YKEIECDKIELDGQLLN-------- 269
           Q G+  D + YS++I  L +    K+   LL KL Y+E   D +  +  + N        
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609

Query: 270 --DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
              ++ GF   G  ++A R           P  A Y  +I   S  G   +A  ++ EL+
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669

Query: 328 ESGLKPRTKAYNALLKGYVKMGY----------------LKDAEF--------------- 356
            S     T A  AL+K   + G                 L DA+                
Sbjct: 670 HSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMD 729

Query: 357 ----VVSEMERSGVLPDEHTYS 374
               V++EM + G+LPD   +S
Sbjct: 730 AVLNVLTEMAKDGLLPDGGIHS 751


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 231/489 (47%), Gaps = 18/489 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L+Y+ +I+AL +   + +A  + ++     ++P   TY ++I    R  DL+ AL + ++
Sbjct: 216 LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L  + +++ +    L +E+    I          I+     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAF--DLIREMILHGILPTAHTCTGPIIALCDM 333

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R     +  G  P   TY A+I+ L  SG    A  +F  +   G+ P T  Y
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   V+   +K A  V++ M R+G  P+  TY+ +I  Y   G  + A +V+  M  
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N   Y+ I+ GY D G      ++L  M+  G +PD   Y  +I  F K + +  
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+ +G+ P+ +T+  LID + K  + D A  L E M+  G  P   TYN++I+
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +Q  +   + L   M  +G+ PNVVTYT ++D             C  G +  A+  
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL-----------CKNGSTSLALEM 622

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P+ L  +SLI A G++ +  EA  +   ++ +GL PD +TY  +++A I 
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682

Query: 639 VDKFHKVFS 647
             K    F+
Sbjct: 683 SGKVEHAFN 691



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 244/554 (44%), Gaps = 32/554 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEAFLLS 186
           + +L+  LC S   ++ A+ ++  +  H +  +       +I    +G  E  +  F+  
Sbjct: 288 YSTLINGLCDS-GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           + +   P   TY ALIS    +  L+ A+ L  +M +DG   + + Y+ +I  L    +I
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 245 DSS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             + ++  L     C     +    N++I G+   GD  KAM  +      G S    TY
Sbjct: 407 KYAFVVLNLMGRNGCSP---NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I    +SG T  A  + + +++ G KP   +Y  L+ G+ K+  ++ A  + +EM  
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+E TY+ LID Y    + ++A  +L+ M+ S  +PN   Y+ ++ G   +  +  
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ K M   G+ P+   Y  MID   K      A+  F++M+ +G  P+ +T+++LI 
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G+ + AE LF E++  G  P   TY  MI       + E     LG M   G  P
Sbjct: 644 ALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDG------------LKP- 589
            + TY  L  I G    +  A + L  L D   N +F    TD             L P 
Sbjct: 704 TLWTYGVL--IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPG 761

Query: 590 -SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            S    N+L++      R  EA  +L  M   GL PD   Y +L+ +L+RV         
Sbjct: 762 LSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD----- 816

Query: 649 YLFFNIYKMLSYSG 662
            L   ++K +S  G
Sbjct: 817 -LAMGVFKHMSTQG 829



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 11/368 (2%)

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           ++ M FL M    GL      Y+A++  LS  G T      +  +   G++P    YNA+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    K G + DAE ++ ++  S + PD  TY+ +I  +      +SA  V  +M     
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN+  YS ++ G  D G     F +++EM   G+ P  H     I       C   A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M ++G EP+  T+  LI      G    A  LF  M   G FP T TYN +IN+L 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           E  R +    +L  M   G  PN+VTY  ++  Y           C+ G   +A+     
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY-----------CILGDPKKAMLVMNN 450

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G   + +  N++I  + +      A  +L  M++ G KPD  +YT L+    ++ K
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 642 FHKVFSSY 649
               F  +
Sbjct: 511 MESAFGLF 518



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 226/576 (39%), Gaps = 57/576 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL---L 185
           + +L+  LC S   + +A  +   + +  + +   + Y+ LI+ L  + ++  AF+   L
Sbjct: 358 YTALISGLCVS-GILKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNL 415

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R   +P  +TYN +I       D +KA+ +M+ M Q G+  + + Y+ +I+    +  
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475

Query: 244 IDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             S+L +  L ++  C   E       ++I GF K      A          GL P   T
Sbjct: 476 TTSALRILDLMRDGGCKPDEWS---YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 532

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I       +   A ++ E +K SG +P  + YN L+ G  K      AE +   M 
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+  TY+ +ID     G    A  +  +M      PN   YS ++      G+ +
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +  E++  G+ PD   Y  MI+ +     + HA     RM+  G +P   T+  LI
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 483 ----------------------DCHF--KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                 +C F  +    D    +  ++ E          N +++
Sbjct: 713 KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 772

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW +   LLG+M +QGL P+   Y +L+    +    D            A+  
Sbjct: 773 NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD-----------LAMGV 821

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M T G +        LI A  +  R  EA    + M      PD V    L+  L+R
Sbjct: 822 FKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881

Query: 639 VDKFHKVFSSYLF----------FNIYKMLSYSGEK 664
            D +  +   +L           F+IY +L+    K
Sbjct: 882 -DGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 234/486 (48%), Gaps = 19/486 (3%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI     +G  +K    F   +R    P  +TYN LI A  +   +++A  L+  M 
Sbjct: 13  YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL-YKEIECDKIELDGQLLNDVIVGFAK 277
             G   + I+Y+++I  L R   +  +  +L+++ YK    D++       N ++ G+ K
Sbjct: 73  SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV-----TYNTLLNGYCK 127

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+  +A+         G+SP   TY A+I ++  +     A   F++++  GL+P  + 
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  L+ G+ + G L +A  +++EM  SG  P   TY+  I  +    R E A  V++EM 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+   YS I++G+  +GE  R FQ+ +EM   GV PD   Y+ +I    +   L 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A      ML  G+ PD  T+ TLI+ +   G  ++A  L +EM  +G+ P   TY+++I
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLS 572
           N L +Q R  + KRLL  +  +  +P+ VTY TL++       F   +      C++GL 
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI-EFKSVVALIKGFCMKGLM 426

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A   F  M     KP     N +I+         +AF + + M  +G  P  VT  TL
Sbjct: 427 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486

Query: 633 MKALIR 638
           +KAL +
Sbjct: 487 IKALFK 492



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 165/340 (48%), Gaps = 11/340 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           +SP   TY  +I    + G   +    F E++ +G  P    YN L+  Y KMG + +A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++  M   G+ P+  +Y+++I+     G  + A  +L+EM      P+   Y+ +L GY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G + +   +  EM  +GV P    Y  +I++  K   L+ AM  FD+M   G+ P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            T+ TLID   + G  + A  +  EM E G+ P   TYN  I+     ER E+   ++  
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M  +GL P+VV+Y+T++  +           C +G  D+A    + M   G+ P  +  +
Sbjct: 246 MVEKGLAPDVVSYSTIISGF-----------CRKGELDRAFQMKQEMVEKGVSPDAVTYS 294

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           SLI    E +R  EA  + Q M + GL PD  TYTTL+ A
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 334



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 11/314 (3%)

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           S + P    YN L++G+  +G L+       EMER+G LP+  TY+ LIDAY   GR + 
Sbjct: 4   SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 63

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK M     +PN   Y+ I+ G    G  +  +++L+EM   G  PD   YN +++
Sbjct: 64  AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 123

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + K    H A+     M+  G+ P  +T+  LI+   K    +RA E F++M+ RG  P
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +I+    Q    +  R+L  M   G  P+VVTY     I+G          C+
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF--IHGH---------CV 232

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               ++A+   + M   GL P  ++ +++I+ F        AF + Q M E G+ PD VT
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292

Query: 629 YTTLMKALIRVDKF 642
           Y++L++ L  + + 
Sbjct: 293 YSSLIQGLCEMRRL 306



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 11/286 (3%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M RS V P+ +TY++LI  + + G  +       EME +   PN   Y+ ++  Y   G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
               F +LK M S G++P+   YNV+I+   +   +  A    + M  +G  PD +T+NT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L++ + K G + +A  +  EM   G  P   TY  +IN + +             MR +G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L PN  TYTTL+D + +           +GL ++A      M   G  PS +  N+ I+ 
Sbjct: 181 LRPNERTYTTLIDGFSR-----------QGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
               +R  EA  V+Q M E GL PDVV+Y+T++    R  +  + F
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 275



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 151/358 (42%), Gaps = 29/358 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+++ ++  L  A     + R+  L     TY  LI   +R   L +A  ++++M 
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+    + Y+  I       +++ +L   + +E+    +  D    + +I GF + G+
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEAL--GVVQEMVEKGLAPDVVSYSTIISGFCRKGE 270

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +        G+SP   TY+++I  L    R  EA  + +E+ + GL P    Y  
Sbjct: 271 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTT 330

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y   G L  A  +  EM   G LPD  TYS+LI+      R   A+ +L ++    
Sbjct: 331 LINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEE 390

Query: 401 AKPNSFIYSRIL---------------AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           + P+   Y  ++                G+  +G      +V + M     +P    YNV
Sbjct: 391 SVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNV 450

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +I    +   L  A   +  M+  G  P T+T  TLI   FK       E + EEM E
Sbjct: 451 IIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK-------EGMNEEMSE 501



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+   + P+  T+N LI      G   +    F EM+  G  P   TYN +I+   +  R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            ++   LL +M ++G+ PN+++Y  +++   + G   +A E LE            M   
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILE-----------EMGYK 109

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G  P  +  N+L+N + ++    +A  +   M  NG+ P VVTYT L+ ++ +    ++ 
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169

Query: 646 FSSY 649
              +
Sbjct: 170 MEFF 173



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 95/238 (39%), Gaps = 33/238 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L    +L EA  LSQ      L P   TY  LI+A     DL KAL+L  +M 
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352

Query: 221 QDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             G+  D + YS++I  L    RT +    L + +Y+E     +  D  + N   + F  
Sbjct: 353 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK- 411

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                                   +  A+I      G   EA+ VFE + E   KP    
Sbjct: 412 ------------------------SVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 447

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           YN ++ G+ + G L  A  +  EM  SG +P   T   LI A    G  E    V+ +
Sbjct: 448 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 235/522 (45%), Gaps = 51/522 (9%)

Query: 170 IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           + A+ R        L ++  R    TY+ +I  C+R   L+ A   + ++ + G+    I
Sbjct: 73  LSAVARESPAVALSLFNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAI 132

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            +S +++ L   +K  S  +    + +       +    N ++ G      + +A+  L 
Sbjct: 133 TFSPLLKGLCH-DKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLH 191

Query: 290 --MAQGV--GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             MA     G  P   +Y  VI  L   G+  +A  +F+E+ + G+ P    YN LL GY
Sbjct: 192 TMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGY 251

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
              G  K+A  +  +M R GV PD  TY+ L+      GR   AR V   M     KP+S
Sbjct: 252 CSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDS 311

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--- 462
            IY  +L GY   G   +  Q+L  M  +G +PD + +N++I  + K+  +  AM A   
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK 371

Query: 463 --------------------------------FDRMLSEGIEPDTITWNTLIDCHFKCGR 490
                                           FDR++SEG+ P+ + + TLI     C +
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D+AEEL  EM  RG  P T  +N ++N L ++      K +   M    +  +V+TYTT
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D Y   G+ D+A + LEG           M  DG+KP+ +  N++IN + ++ R  +A
Sbjct: 492 LIDGYCLDGKVDEATKLLEG-----------MVLDGVKPNEVTYNTIINGYCKNGRIEDA 540

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            ++ + M   G+ P +V Y+T++  L +  +       YL+ 
Sbjct: 541 CSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 147/577 (25%), Positives = 255/577 (44%), Gaps = 72/577 (12%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ 189
           +S++   CS    +DLA+A +  + +     +  + +S L+  L   ++  +A  ++ R+
Sbjct: 99  YSIVIGCCSRAGHLDLAFAALGRVIRTGW-TAQAITFSPLLKGLCHDKRTSDAMDIALRR 157

Query: 190 R----LTP--LTYNALISACARNDDLEKALNLMSKMRQD----GYHCDFINYSLVIQSLT 239
                 TP   +YN L+      +  ++AL+L+  M  D    G   D ++Y+ VI  L 
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R  ++D +    L+ E+    +  +    N ++ G+  +G   +A+         G+ P 
Sbjct: 218 REGQLDKAYC--LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPD 275

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  ++  L  +GR++EA  VF+ + + G KP +  Y  LL GY   GYL     ++ 
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME--------VSHAK--------- 402
            M R+G  PD + +++LI AYA  G  + A +   +M         V++           
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 403 ------------------PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
                             PN  ++  ++ G     +W +  ++  EM   G+ P+T F+N
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +++   K   +  A   FD M+   ++ D IT+ TLID +   G+ D A +L E M   
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P   TYN +IN   +  R ED   L   M ++G+ P +V Y+T++    Q+ R   A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 565 -------IEC------------LEGL-----SDQAVNAFRVMRTDGLKPSNLALNSLINA 600
                  I+C            L+GL     +D A+  F  +        N   N +I+A
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             +  R  EA  +   +   GL P+VVTY  +MK+LI
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLI 672



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 129/554 (23%), Positives = 220/554 (39%), Gaps = 104/554 (18%)

Query: 80  QRYDFTPLLNFLSENSNSESA--------SALASSPSSLNRVEFKLAESYRAVPAPLWHS 131
           Q   F+PLL  L  +  +  A         AL  +P++ +                 ++ 
Sbjct: 130 QAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFS-----------------YNI 172

Query: 132 LLKNLCSSNSSIDLAYAVVSWL--QKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR- 188
           LLK LC  N S    + + + +       C    + Y+ +I+ L R  +L +A+ L    
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 189 --QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT--- 241
             Q ++P  +TYN L+     +   ++A+ +  KM +DG   D + Y+ ++  L +    
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 242 --------------NKIDSSL----------------LQKLYKEIECDKIELDGQLLNDV 271
                         +K DSS+                + +L   +  +  + D  + N +
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNIL 352

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I  +AK G   +AM      +  GL P   TY  V+ AL   G+  +A + F+ L   GL
Sbjct: 353 IGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGL 412

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP----------------------- 368
            P    +  L+ G         AE +  EM   G+ P                       
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKN 472

Query: 369 ------------DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
                       D  TY+ LID Y   G+ + A  +L+ M +   KPN   Y+ I+ GY 
Sbjct: 473 IFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYC 532

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G  +    + ++M S GV P    Y+ ++    +   +  A   +  M+  GI+    
Sbjct: 533 KNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIG 592

Query: 477 TWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           T+N ++   C   C   D A  +F  +    +     T+NIMI+ L +  R ++ K L  
Sbjct: 593 TYNIILQGLCQNNC--TDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFA 650

Query: 535 NMRAQGLLPNVVTY 548
           ++ A+GL+PNVVTY
Sbjct: 651 SLLARGLVPNVVTY 664


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 243/524 (46%), Gaps = 30/524 (5%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLE 210
           H +C    + ++ L++ L R  ++ EA  L  R     L P  +TY  ++    +  D  
Sbjct: 171 HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 211 KALNLMSKMRQDGY-HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            ALNL+ KM +  +   + + YS +I  L +  +   S    LY E++   I  D    N
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGR--HSDAHNLYTEMQEKGIFPDLFTYN 288

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I GF  +G  S+A R L       ++P   TY+A+I A     +  EAE +++E+   
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P T  YN+++ G+ K   L  AE +   M   G  PD  T++ LID Y  A R +  
Sbjct: 349 GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDG 408

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L EM  +    ++  Y+ ++ G+   G+      + ++M SSGV PD    N ++D 
Sbjct: 409 TELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 468

Query: 450 FGKYNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
                 L  A+  F  M              G+EPD  T+N LI      G++  AEEL+
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +EM  RG  P T TY+ MIN L +Q R ++  ++  +M ++   P+VVT+ TLV  Y ++
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           GR DD +E            F  M   G+    +   +LI+ F +      A  + Q M 
Sbjct: 589 GRVDDGLE-----------LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI 637

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            +G+ PD +T  +++  L   ++  +  +      +   LS+ G
Sbjct: 638 SSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMSMDLSFGG 681



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 226/461 (49%), Gaps = 16/461 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++N LI        L  AL+   K+ + G+  D + +S ++  L   +++  +L   L+ 
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL--DLFH 171

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +     L+N    G  + G   +A+  L      GL P   TY  ++  +   G
Sbjct: 172 QMCRPNVVTFTTLMN----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227

Query: 315 RTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            T+ A  +  +++E S +KP    Y+A++ G  K G   DA  + +EM+  G+ PD  TY
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +ID + ++GRW  A+ +L+EM      PN   YS ++  Y    ++    ++  EM  
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+T  YN MID F K N L  A   F  M ++G  PD  T+NTLID +    R D 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 494 AEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             EL  EM E G    TTTYN +I+   L+G+     D+ +    M + G+ P++VT  T
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ---QMISSGVCPDIVTCNT 464

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D    +G+  DA+E  + +    ++       +G++P     N LI+    + +  EA
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
             + + M   G+ P+ +TY++++  L    R+D+  ++F S
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 29/344 (8%)

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           +++++++   +     ++N L+K +     L  A     ++ + G  PD  T+S L+   
Sbjct: 98  SLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGL 157

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
               R   A  +  +M     +PN   ++ ++ G    G       +L  M   G++P+ 
Sbjct: 158 CVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQ 213

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
             Y  ++D   K      A+    +M     I+P+ + ++ +ID  +K GR+  A  L+ 
Sbjct: 214 ITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYT 273

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EMQE+G FP   TYN MI+      RW + +RLL  M  + + PNVVTY+ L++ Y +  
Sbjct: 274 EMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKER 333

Query: 560 RFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           +F +A E                        C +   D A + F VM T G  P     N
Sbjct: 334 KFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFN 393

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +LI+ +   +R  +   +L  M E GL  D  TY TL+     V
Sbjct: 394 TLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 33/283 (11%)

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           E A  +  +M  S   P+   +++++              + ++M+   +  D + +N++
Sbjct: 59  EDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNIL 118

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC--GRYDRAEELFEEMQER 504
           I  F   + L  A++ F ++   G +PD +T++TL+  H  C   R   A +LF +M   
Sbjct: 119 IKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLL--HGLCVEDRVSEALDLFHQMCR- 175

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   T+  ++N L  + R  +   LL  M   GL PN +TY T+VD   + G    A
Sbjct: 176 ---PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232

Query: 565 IECL-------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           +  L                         +G    A N +  M+  G+ P     N +I+
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            F    R +EA  +LQ M E  + P+VVTY+ L+ A ++  KF
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 17/191 (8%)

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F +   L  A+  F  M+     P  I +N L+    +  R D    L+++M ER   PC
Sbjct: 52  FHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKM-ERKQIPC 110

Query: 510 TT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              ++NI+I       +        G +   G  P+VVT++TL  ++G          C+
Sbjct: 111 DVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL--LHGL---------CV 159

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E    +A++ F  M     +P+ +   +L+N    + R  EA A+L  M E+GL+P+ +T
Sbjct: 160 EDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 215

Query: 629 YTTLMKALIRV 639
           Y T++  + ++
Sbjct: 216 YGTIVDGMCKI 226



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 105/228 (46%), Gaps = 16/228 (7%)

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
           ++ +G+ +    +    +  +M  S   P    +N ++    +       ++ + +M  +
Sbjct: 47  KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK 106

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
            I  D  ++N LI C   C +   A   F ++ + G+ P   T++ +++ L  ++R  + 
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             L   M      PNVVT+TTL++   + GR  +A+  L+            M  DGL+P
Sbjct: 167 LDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDR-----------MVEDGLQP 211

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKE-NGLKPDVVTYTTLMKAL 636
           + +   ++++   +      A  +L+ M+E + +KP+VV Y+ ++  L
Sbjct: 212 NQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL 259


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 255/575 (44%), Gaps = 96/575 (16%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P  + +S++ + CS    +DLA+A +  + +     +  + +S L+ AL   ++  EA  
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWT-AEAITFSPLLKALCDKKRTSEAMD 147

Query: 185 LSQRQR----LTP--LTYNALISACARNDDLEKALNLMSKM-----RQDGYHCDFINYSL 233
           ++ R+      TP   +Y  L+      +  ++AL+L+  M      + GY  D ++Y+ 
Sbjct: 148 IALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207

Query: 234 VIQSLTRTNK-IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           VI  L R  + +D++               L  Q+L+                       
Sbjct: 208 VINGLLREGRQLDTAY-------------HLFDQMLDQ---------------------- 232

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GLSP   TY ++I+ALS +    +A  V   + ++G  P    +N+LL GY   G   
Sbjct: 233 --GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPN 290

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  V   M R GV PD  TY+ L+      GR   AR +   M     KPNS  Y  +L
Sbjct: 291 DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            GY   G   +   +L  M  +G++PD + +N++I T+ K+  +  AM  F +M  +G+ 
Sbjct: 351 HGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLN 410

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PDT+T+  ++D     G+ D A   F  +   G  P    +  +I+ L  +++W+  + L
Sbjct: 411 PDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEEL 470

Query: 533 LGNMRAQGLLPN-----------------------------------VVTYTTLVDIYGQ 557
              M  +G+ PN                                   V+TY TL+D Y  
Sbjct: 471 AVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCL 530

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G+ D+A + LEG           M  DG+KP+ +  N++IN + ++ R  +AF++ + M
Sbjct: 531 HGKVDEAAKLLEG-----------MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM 579

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              G+ P +VTY+T+++ L +  +       YL+ 
Sbjct: 580 ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 246/550 (44%), Gaps = 57/550 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRS----EKLYEAFL 184
           LLK LC  N S    + + + +   +    Y    + Y+ +I+ L R     +  Y  F 
Sbjct: 168 LLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFD 227

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
               Q L+P  +TYN++ISA ++   ++KA  ++ +M ++G   + I ++ ++     + 
Sbjct: 228 QMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSG 287

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K + ++   ++K +  D +E D    N ++    K G + +A +        G  P +AT
Sbjct: 288 KPNDAI--GVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSAT 345

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++   +  G  ++   + + +  +G++P    +N L+  Y K G + DA  + S+M 
Sbjct: 346 YGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMR 405

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R G+ PD  TY +++DA    G+ + A      +      P++ ++  ++ G   R +W 
Sbjct: 406 RQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWD 465

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGK-------------------------YN--- 454
           +  ++  EM   G+ P+  F+N +++   K                         YN   
Sbjct: 466 KAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLI 525

Query: 455 ---CLH----HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
              CLH     A    + M+ +G++P+ +T+NT+I+ + K GR + A  LF +M  +G  
Sbjct: 526 DGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVN 585

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY+ ++  L +  R    K L   M   G+  ++ TY  +  + G          C
Sbjct: 586 PGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNII--LLGL---------C 634

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
               +D A+  F+ +        N   N +I+A  +  R  EA  +   +   GL P+VV
Sbjct: 635 QNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 694

Query: 628 TYTTLMKALI 637
           TY  +MK+LI
Sbjct: 695 TYWLMMKSLI 704



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 191/441 (43%), Gaps = 9/441 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +++L+  LC +  S++      S +++ +   S    Y  L+H     G   K++    +
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSAT--YGTLLHGYATEGSLVKMHHLLDM 368

Query: 186 SQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R  + P  Y  N LI    ++  ++ A+ L SKMR+ G + D + Y +V+ +L    K
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D ++ Q  +  +  + +  D  +  ++I G        KA        G G+ P    +
Sbjct: 429 VDDAMAQ--FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFF 486

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   G    A+ +F+ +    ++     YN L+ GY   G + +A  ++  M  
Sbjct: 487 NTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVL 546

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P+E TY+ +I+ Y   GR E A  + ++M      P    YS IL G         
Sbjct: 547 DGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAA 606

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++   M  SG++ D   YN+++    + NC   A+  F  +       +  T+N +ID
Sbjct: 607 AKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMID 666

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR+D A++LF  +  RG  P   TY +M+  L EQ   E++  L  ++   G   
Sbjct: 667 ALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTA 726

Query: 544 NVVTYTTLVDIYGQSGRFDDA 564
           N      LV    Q G    A
Sbjct: 727 NSRMLNALVGKLLQKGEVRKA 747



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 195/434 (44%), Gaps = 14/434 (3%)

Query: 123 AVPAPLWH-SLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEK 178
           A+P  + H SLL   CSS    D A  V   + +  +    ++Y  L   L    GRS +
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPND-AIGVFKRMCRDGVEPDVFTYNTLMGYLCKN-GRSME 326

Query: 179 LYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             + F  ++ +  +    TY  L+   A    L K  +L+  M ++G   D   ++++I 
Sbjct: 327 ARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIG 386

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           + T+  K+D ++L  L+ ++    +  D      V+      G    AM   G     GL
Sbjct: 387 TYTKHGKVDDAML--LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL 444

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P    +  +I  L    +  +AE +  E+   G+ P    +N LL    K G +  A+ 
Sbjct: 445 TPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKN 504

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +   M R  V  D  TY+ LID Y   G+ + A  +L+ M +   KPN   Y+ ++ GY 
Sbjct: 505 IFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYC 564

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G  +  F + ++M S GV P    Y+ ++    +      A   +  M+  GI+ D  
Sbjct: 565 KNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIG 624

Query: 477 TWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           T+N ++   C   C   D A  +F+ +    +     T+NIMI+ L +  R ++ K L  
Sbjct: 625 TYNIILLGLCQNNC--TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFA 682

Query: 535 NMRAQGLLPNVVTY 548
           ++ A+GL+PNVVTY
Sbjct: 683 SLLARGLVPNVVTY 696



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 166/388 (42%), Gaps = 36/388 (9%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAV--FEEL---KESGLKPRTKAYNALLKGYVKMGYLK 352
           P T++   +  ALS++ R   A A+  F  +       + P    Y+ ++    ++G+L 
Sbjct: 49  PTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHAKPNSFIYSRI 411
            A   +  + RSG   +  T+S L+ A  +  R  E+  I L+ M V    PN F Y+ +
Sbjct: 109 LAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTIL 168

Query: 412 LAGYRDRGEWQRTFQVLKEM-----KSSGVEPDTHFYNVMIDTFGKYN-CLHHAMAAFDR 465
           L G  D    Q+   +L  M        G  PD   YN +I+   +    L  A   FD+
Sbjct: 169 LKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQ 228

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ML +G+ PD +T+N++I    K    D+A  +   M + G  P   T+N +++      +
Sbjct: 229 MLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGK 288

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE------------ 566
             D   +   M   G+ P+V TY TL+    ++GR       FD  ++            
Sbjct: 289 PNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGT 348

Query: 567 -----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                  EG   +  +   +M  +G++P +   N LI  + +  +  +A  +   M+  G
Sbjct: 349 LLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG 408

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           L PD VTY  +M AL  V K     + +
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDAMAQF 436



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 3/222 (1%)

Query: 176 SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           + KL E  +L    +   +TYN +I+   +N  +E A +L  +M   G +   + YS ++
Sbjct: 537 AAKLLEGMVLDG-VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           Q L +  +  ++  ++LY  +    I+ D    N +++G  +      A+R       + 
Sbjct: 596 QGLFQARRTAAA--KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLID 653

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
              +  T+  +I AL   GR  EA+ +F  L   GL P    Y  ++K  ++ G L++ +
Sbjct: 654 FHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 713

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            +   +E++G   +    + L+      G    A + L +++
Sbjct: 714 DLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKID 755


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 218/450 (48%), Gaps = 15/450 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
            +YN L++     +  ++AL L+  M  DG  C  D ++YS VI    +   +D +    
Sbjct: 52  FSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKT--YS 109

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            Y E+   +I  +    N +I    KA    KAM  L      G+ P   TY +++    
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           +SG+  EA    ++++  G++P    YN+L+    K G   +A  +   M + G+ P+  
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY  L+  YA  G       +L  M  +   PN +++S ++  Y  + + +    V  +M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G+ P+   Y  +I    K   +  AM  F++M+ EG+ P  I +N+LI     C ++
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +RAEEL  EM +RG    T  +N +I+   ++ R  + ++L   M   G+ P+++TY+TL
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D Y           CL G  D+A      M + G+KP  +  ++LIN + +  R  +A 
Sbjct: 410 IDGY-----------CLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            + + M+ +G+ PD++TY  +++ L +  +
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRR 488



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 233/523 (44%), Gaps = 54/523 (10%)

Query: 122 RAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSE 177
           R +P    ++ LL  LC  N S +    +         C    + YS +I+     G  +
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           K Y  +     QR++P  +TYN++I+A  +   ++KA+ +++ M + G   D + Y    
Sbjct: 106 KTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY---- 161

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
                                            N ++ GF  +G   +A+ FL   +  G
Sbjct: 162 ---------------------------------NSIVHGFCSSGQPKEAIVFLKKMRSDG 188

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L +  
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 248

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++  M R+G+ P+ + +S+L+ AYA   + E A +V  +M      PN+  Y  ++   
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G  +      ++M   G+ P    YN +I      N    A      ML  GI  +T
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           I +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +LL +
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M + G+ P+ VTY+TL++ Y +  R  DA+             FR M + G+ P  +  N
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALV-----------LFREMESSGVSPDIITYN 477

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            ++    + +R A A  +   + ++G + ++ TY  ++  L +
Sbjct: 478 IILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK 520



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 218/470 (46%), Gaps = 26/470 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLL 185
           ++S++  LC + + +D A  V++ + K  +   C +Y    + ++H    S +  EA + 
Sbjct: 126 YNSIIAALCKAQT-VDKAMEVLTTMVKSGVMPDCMTY----NSIVHGFCSSGQPKEAIVF 180

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            ++ R   + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q    
Sbjct: 181 LKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYAT 240

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              +    +  L   +  + I  +  + + ++  +AK     +AM      +  GL+P  
Sbjct: 241 KGALVE--MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 298

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY AVI  L  SGR  +A   FE++ + GL P    YN+L+ G       + AE ++ E
Sbjct: 299 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 358

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+  +   ++ +ID++   GR   +  +   M     KP+   YS ++ GY   G+
Sbjct: 359 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 418

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M S G++PD   Y+ +I+ + K + +  A+  F  M S G+ PD IT+N 
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++   F+  R   A+EL+  + + G     +TYNI+++ L + +  +D  R+  N+    
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           L     T+  ++D   + GR           +D+A + F    ++GL P+
Sbjct: 539 LKLEARTFNIMIDALLKVGR-----------NDEAKDLFVAFSSNGLVPN 577



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 6/348 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ L+ A A+ + +E+A+ + SKMRQ G + + + Y  VI  L ++ +++ ++L   Y 
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML---YF 321

Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E   D+    G ++ N +I G        +A   +      G+   T  + ++I +    
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 381

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR IE+E +F+ +   G+KP    Y+ L+ GY   G + +A  +++ M   G+ PD  TY
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI+ Y    R + A ++ +EME S   P+   Y+ IL G           ++   +  
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITK 501

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG + +   YN+++    K      A+  F  +    ++ +  T+N +ID   K GR D 
Sbjct: 502 SGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 561

Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
           A++LF      G  P   TY +M  N++G Q   E++ +L  +M   G
Sbjct: 562 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 608



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 147/329 (44%), Gaps = 14/329 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLPDEHTYSL 375
           +A  VF+EL   G+ P   +YN LL G       ++A  ++  M   G    PD  +YS 
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+ +   G  +       EM      PN   Y+ I+A         +  +VL  M  SG
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V PD   YN ++  F        A+    +M S+G+EPD +T+N+L+D   K GR   A 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++F+ M +RG  P  TTY  ++     +    ++  LL  M   G+ PN   ++ LV  Y
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            +  + ++A+             F  MR  GL P+ +   ++I    +  R  +A    +
Sbjct: 274 AKQEKVEEAML-----------VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            M + GL P  + Y +L+  L   +K+ +
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWER 351



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 154/341 (45%), Gaps = 17/341 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
           +++SL+  LC+ N   + A  ++  +    +C +     SI+      GR   SEKL++ 
Sbjct: 335 VYNSLIHGLCTCNKW-ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD- 392

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             L  R  + P  +TY+ LI        +++A  L++ M   G   D + YS +I    +
Sbjct: 393 --LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCK 450

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG-FAKAGDASKAMRFLGMAQGVGLSPK 299
            +++  +L+  L++E+E   +  D    N ++ G F     A+    ++G+ +  G   +
Sbjct: 451 ISRMKDALV--LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKS-GRQLE 507

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            +TY  ++  L  +  T +A  +F+ L    LK   + +N ++   +K+G   +A+ +  
Sbjct: 508 LSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 567

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
               +G++P+  TY L+ +     G  E    +   ME +    +S + + I+     RG
Sbjct: 568 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627

Query: 420 EWQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           E  R  T+  + + K   +E  T    + + + GKY   H 
Sbjct: 628 EITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHR 668



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENG--LKPDVVTYTTLMKALIRVDKFHKVF 646
           P   + N L+N   ++ R  EA  +L  M ++G    PDVV+Y+T++    +     K +
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108

Query: 647 SSY 649
           S+Y
Sbjct: 109 STY 111


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 221/475 (46%), Gaps = 37/475 (7%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG----------------YHCDFI 229
           RQ  TP  + +N ++ +  ++      L+L  +M  +G                YH + I
Sbjct: 69  RQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTI 128

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            ++ +I+ L    +I  +LL   +  +     +LD      +I G  K G+   A+  L 
Sbjct: 129 TFTTLIKGLCLKGQIHQALL--FHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLR 186

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
              G  + P    Y+ +I  +       +A  ++ E+   G+ P    Y+AL+ G+  +G
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            LKDA  + ++M    + PD +T+++L+D +   G+ +  + V   M     KPN   Y 
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ GY    E  +   +L  M   GV PD   YN++ID F K   +  AM  F  M  +
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
            I PD +T+N+LID   K G+   A +L +EM +RG  P   TY+ +++ L +  + +  
Sbjct: 367 HIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             LL  ++ QG+ PN+ TYT L+D   + GR +DA    E L               +K 
Sbjct: 427 IALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL--------------VKG 472

Query: 590 SNLALNS---LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            N+ +N+   +I+ F       EA A+L  MK+N   PD VTY  ++++L   D+
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE 527



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 170/382 (44%), Gaps = 8/382 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LIH L +  +   A  L +R     + P  + Y+ +I    ++  +  A +L S+M 
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 224

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + YS +I       ++  ++   L+ ++  + I+ D    N ++ GF K G 
Sbjct: 225 SKGISPNVVTYSALISGFFTVGQLKDAI--DLFNKMILENIKPDVYTFNILVDGFCKDGK 282

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +      M    G+ P   TY +++          +A+++   + + G+ P  ++YN 
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+ K+  + +A  +  EM    ++PD  TY+ LID     G+   A  ++ EM    
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS IL       +  +   +L ++K  G+ P+ + Y ++ID   K   L  A 
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAH 462

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ +L +G      T+  +I      G +D A  L  +M++    P   TY I+I  L
Sbjct: 463 NIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522

Query: 521 GEQERWEDVKRLLGNMRAQGLL 542
            +++  +  ++ L  M  +GLL
Sbjct: 523 FDKDENDKAEK-LREMITRGLL 543



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 140/343 (40%), Gaps = 38/343 (11%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++ T   N+   ++A ++F  L      P    +N +L   VK  +      +  +ME
Sbjct: 44  YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA----KPNSFIYSRILAGYRDR 418
             G+ P                       VL   +  H      PN+  ++ ++ G   +
Sbjct: 104 FEGINP-----------------------VLFHFQHPHQLMGYHPNTITFTTLIKGLCLK 140

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  +       + + G + D   Y  +I    K      A+    R+    ++P+ + +
Sbjct: 141 GQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMY 200

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +T+ID   K    + A +L+ EM  +G  P   TY+ +I+      + +D   L   M  
Sbjct: 201 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 260

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + + P+V T+  LVD +           C +G   +    F +M   G+KP+ +   SL+
Sbjct: 261 ENIKPDVYTFNILVDGF-----------CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           + +   +   +A ++L  M + G+ PD+ +Y  L+    ++ K
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 122/292 (41%), Gaps = 30/292 (10%)

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  + S + R    P    ++ ++ +   +  + +   + ++ME     P  F      
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLF------ 112

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                   +Q   Q++      G  P+T  +  +I        +H A+   D +++ G +
Sbjct: 113 -------HFQHPHQLM------GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            D + + TLI    K G    A +L   +      P    Y+ +I+ + + +   D   L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M ++G+ PNVVTY+ L+  +   G+  DAI+            F  M  + +KP   
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAID-----------LFNKMILENIKPDVY 268

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             N L++ F +D +  E   V   M + G+KP+VVTY +LM     V + +K
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 231/484 (47%), Gaps = 18/484 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  + +    +      +TYN+LISA AR+  L++A+ L S
Sbjct: 326 KVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKS 385

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    +T K D ++  K+++E+     + +    N +I     
Sbjct: 386 QMVKKGIKPDVFTYTTLLSGFEKTGKDDYAM--KVFEEMRVAGCQPNICTFNALIKMHGN 443

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+  + M+     +     P   T+  ++     +G   E   VF+E+K +G  P    
Sbjct: 444 RGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 503

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G+   A  +   M  +GV PD  TY+ ++ A A  G WE +  VL EM+
Sbjct: 504 FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   Y  +L  Y +  E +R   + +E+ S  +EP       ++  + K + L 
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLT 623

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF  +  +G  PD  T N ++  + +     +  E+   +++ G+ P  TTYN ++
Sbjct: 624 ETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLM 683

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +    E +E  + +L  + A+G+ P+++++ T++  Y ++GR             +A  
Sbjct: 684 YMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRM-----------KEASR 732

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M+  GL P  +  N+ I ++  D    EA  V++YM +NG KP+  TY +L+    
Sbjct: 733 IFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFC 792

Query: 638 RVDK 641
           ++++
Sbjct: 793 KLNR 796



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 216/473 (45%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y +LI+A A N    +A+ +  K+ ++G     I Y++++    +   +  S +  L   
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG-MPWSKIAGLVDS 281

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   +  D    N +I    +     +A       +  G SP   TY A++     S R
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V +E++ SG  P    YN+L+  Y + G L +A  + S+M + G+ PD  TY+ 
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+  +   G+ + A  V +EM V+  +PN   ++ ++  + +RG +    +V +E+K   
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+NTLI  + +CG +D+A 
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            ++  M + G  P  +TYN ++  L     WE  +++L  M+     PN +TY +L+  Y
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 556 GQSGRFDD----AIECLEGLSD-QAV-------------------NAFRVMRTDGLKPSN 591
                 +     A E   G+ + QAV                    AF  +R  G  P  
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDI 641

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++++ +G  +  ++   +L ++K++G  P + TY +LM    R + F K
Sbjct: 642 TTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 14/378 (3%)

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
           L   ++  +I    K G AS A   L   +  G+      Y ++ITA +++GR  EA  V
Sbjct: 183 LSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMV 242

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMG--YLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           F++L+E G +P    YN +L  Y KMG  + K A  V S M+ SGV PD +TY+ LI + 
Sbjct: 243 FKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS-MKSSGVAPDLYTYNTLISSC 301

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
                +E A  V +EM+ +   P+   Y+ +L  Y      +   +VLKEM++SG  P  
Sbjct: 302 RRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YN +I  + +   L  AM    +M+ +GI+PD  T+ TL+    K G+ D A ++FEE
Sbjct: 362 VTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEE 421

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M+  G  P   T+N +I + G +  + ++ ++   ++    +P++VT+ TL+ ++GQ+  
Sbjct: 422 MRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN-- 479

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                    G+  +    F+ M+  G  P     N+LI+A+       +A A+ + M + 
Sbjct: 480 ---------GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530

Query: 621 GLKPDVVTYTTLMKALIR 638
           G+ PD+ TY  ++ AL R
Sbjct: 531 GVTPDLSTYNAVLAALAR 548



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 217/476 (45%), Gaps = 48/476 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LIS+C R    E+A  +  +M+  G+  D + Y+ ++    ++ +   ++  ++ K
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM--EVLK 350

Query: 255 EIEC------------------------DKIELDGQLLND-----------VIVGFAKAG 279
           E+E                         + +EL  Q++             ++ GF K G
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTG 410

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               AM+     +  G  P   T+ A+I    N G  +E   VFEE+K     P    +N
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  + + G   +   V  EM+R+G +P+  T++ LI AY+  G ++ A  + + M  +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   Y+ +LA     G W+++ +VL EMK    +P+   Y  ++  +     +   
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            A  + + S  IEP  +   TL+  + K       E  F E++E+G+ P  TT N M+++
Sbjct: 591 SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSI 650

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            G +        +L  ++  G  P++ TY +L+ +Y ++  F+ + + L           
Sbjct: 651 YGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL----------- 699

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           R +   G+KP  ++ N++I A+  + R  EA  +   MK+ GL PDV+TY T + +
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIAS 755



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 164/347 (47%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I+ L   GR   A ++  +L+  G+     AY +L+  Y   G  ++A  V  ++E 
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W     ++  M+ S   P+ + Y+ +++  R    ++
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              +V +EMK++G  PD   YN ++D +GK      AM     M + G  P  +T+N+LI
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  D A EL  +M ++G  P   TY  +++   +  + +   ++   MR  G  
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ 428

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  G F + ++  E +           +     P  +  N+L+  FG
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEI-----------KICECVPDIVTWNTLLAVFG 477

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ A  R   F +  + Y
Sbjct: 478 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/344 (20%), Positives = 151/344 (43%), Gaps = 2/344 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N L++   +N    +   +  +M++ G+  +   ++ +I + +R    D ++   +Y
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM--AIY 524

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + +    +  D    N V+   A+ G   ++ + L   +     P   TY +++ A +N 
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 584

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
                  A+ EE+    ++P+      L+  Y K   L + E    E+   G  PD  T 
Sbjct: 585 KEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTL 644

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++  Y           +L  ++ S   P+   Y+ ++  Y     ++++  +L+E+ +
Sbjct: 645 NAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIA 704

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   +N +I  + +   +  A   F  M   G+ PD IT+NT I  +     +  
Sbjct: 705 KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIE 764

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           A ++ + M + G  P   TYN +I+   +  R ++    + N+R
Sbjct: 765 AIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLR 808


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 231/489 (47%), Gaps = 18/489 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L+Y+ +I+AL +   + +A  + ++     ++P   TY ++I    R  DL+ AL + ++
Sbjct: 386 LIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 445

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L  + +++ +    L +E+    I          I+     
Sbjct: 446 MAKEGCEPNTVTYSTLINGLCDSGRVNEAF--DLIREMILHGILPTAHTCTGPIIALCDM 503

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R     +  G  P   TY A+I+ L  SG    A  +F  +   G+ P T  Y
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   V+   +K A  V++ M R+G+  +  TY+ +I  Y   G  + A +V+  M  
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N   Y+ I+ GY D G      ++L  M+  G +PD   Y  +I  F K + +  
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+ +G+ P+ +T+  LID + K  + D A  L E M+  G  P   TYN++I+
Sbjct: 684 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +Q  +   + L   M  +G+ PNVVTYT ++D             C  G +  A+  
Sbjct: 744 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL-----------CKNGSTSLALEM 792

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P+ L  +SLI A G++ +  EA  +   ++ +GL PD +TY  +++A I 
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852

Query: 639 VDKFHKVFS 647
             K    F+
Sbjct: 853 SGKVEHAFN 861



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 245/553 (44%), Gaps = 30/553 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEAFLLS 186
           + +L+  LC S   ++ A+ ++  +  H +  +       +I    +G  E  +  F+  
Sbjct: 458 YSTLINGLCDSGR-VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           + +   P   TY ALIS    +  L+ A+ L  +M +DG   + + Y+ +I  L    +I
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 576

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
             + +  +   +  + +  +    N++I G+   GD  KAM  +      G S    TY 
Sbjct: 577 KYAFV--VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 634

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I    +SG T  A  + + +++ G KP   +Y  L+ G+ K+  ++ A  + +EM   
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ P+E TY+ LID Y    + ++A  +L+ M+ S  +PN   Y+ ++ G   +  +   
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++ K M   G+ P+   Y  MID   K      A+  F++M+ +G  P+ +T+++LI  
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             + G+ + AE LF E++  G  P   TY  MI       + E     LG M   G  P 
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 874

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDG------------LKP-- 589
           + TY  L  I G    +  A + L  L D   N +F    TD             L P  
Sbjct: 875 LWTYGVL--IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 932

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           S    N+L++      R  EA  +L  M   GL PD   Y +L+ +L+RV          
Sbjct: 933 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD------ 986

Query: 650 LFFNIYKMLSYSG 662
           L   ++K +S  G
Sbjct: 987 LAMGVFKHMSTQG 999



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 11/368 (2%)

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           ++ M FL M    GL      Y+A++  LS  G T      +  +   G++P    YNA+
Sbjct: 332 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 391

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    K G + DAE ++ ++  S + PD  TY+ +I  +      +SA  V  +M     
Sbjct: 392 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN+  YS ++ G  D G     F +++EM   G+ P  H     I       C   A  
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M ++G EP+  T+  LI      G    A  LF  M   G FP T TYN +IN+L 
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           E  R +    +L  M   GL  N+VTY  ++  Y           C+ G   +A+     
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY-----------CILGDPKKAMLVMNN 620

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G   + +  N++I  + +      A  +L  M++ G KPD  +YT L+    ++ K
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 642 FHKVFSSY 649
               F  +
Sbjct: 681 MESAFGLF 688



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 225/576 (39%), Gaps = 57/576 (9%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL---L 185
            + +L+  LC S   + +A  +   + +  + +   + Y+ LI+ L  + ++  AF+   L
Sbjct: 528  YTALISGLCVSGL-LKVAIGLFHRMSRDGV-FPNTVTYNALINILVENRRIKYAFVVLNL 585

Query: 186  SQRQRL--TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              R  L    +TYN +I       D +KA+ +M+ M Q G+  + + Y+ +I+    +  
Sbjct: 586  MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 645

Query: 244  IDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
              S+L +  L ++  C   E       ++I GF K      A          GL P   T
Sbjct: 646  TTSALRILDLMRDGGCKPDEWS---YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVT 702

Query: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
            Y A+I       +   A ++ E +K SG +P  + YN L+ G  K      AE +   M 
Sbjct: 703  YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 762

Query: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              G+ P+  TY+ +ID     G    A  +  +M      PN   YS ++      G+ +
Sbjct: 763  EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822

Query: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
                +  E++  G+ PD   Y  MI+ +     + HA     RM+  G +P   T+  LI
Sbjct: 823  EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882

Query: 483  ----------------------DCHF--KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                  +C F  +    D    +  ++ E          N +++
Sbjct: 883  KGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVS 942

Query: 519  LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             L    RW +   LLG+M +QGL P+   Y +L+    +    D            A+  
Sbjct: 943  NLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD-----------LAMGV 991

Query: 579  FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            F+ M T G +        LI A  +  R  EA    + M      PD V    L+  L+R
Sbjct: 992  FKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 1051

Query: 639  VDKFHKVFSSYLF----------FNIYKMLSYSGEK 664
             D +  +   +L           F+IY +L+    K
Sbjct: 1052 -DGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 226/517 (43%), Gaps = 56/517 (10%)

Query: 176 SEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           SE++   F    R+   ++ P   TY+ LI    R   LE        + + G+  + I 
Sbjct: 68  SERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIV 127

Query: 231 YSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
            S +++ L    ++D  + +L     E  C     D    N VI GF + G   KA    
Sbjct: 128 ISQLLKGLCDAKRVDEATDILLLRMSEFGCPP---DVVAYNTVINGFFREGQVEKAYNLF 184

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 G+ P   TY  VI  L  +     A+ VF+++ + G+KP    YN L+ GY+  
Sbjct: 185 LEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLST 244

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+   ++ EM   G+ PD  TY+LL+D     GR   AR+    M     KP+  IY
Sbjct: 245 GKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIY 304

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + +L GY  +G        L  M  +GV P+   +N+M   + K   +  AM  F++M  
Sbjct: 305 AILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQ 364

Query: 469 EGIEPDTITWNTLIDCHFKCGRYD-----------------------------------R 493
           +G+ PD +++  LID   K GR D                                   +
Sbjct: 365 QGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           AEELF E+ ++G       +N ++  L  + R  + +RL+  M   G+ PNV++Y TLV 
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV- 483

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                     A  CL G  D+A     VM ++GLKP+      L+  + + +R  +A+++
Sbjct: 484 ----------AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSL 533

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            + M   G+ P V TY T++  L +  +F +    YL
Sbjct: 534 FREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/633 (23%), Positives = 264/633 (41%), Gaps = 76/633 (12%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           F  LL  +S    S ++  + S  + + R       S +  P    +S+L         +
Sbjct: 52  FNQLLTVVSRAGCSSASERVVSLFTRMAR-----ECSSKVAPNACTYSILIGCFCRMGRL 106

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP---LTYN 197
           +  +A    + K     +  ++ S L+  L  ++++ EA    LL   +   P   + YN
Sbjct: 107 EHGFAAFGLILKTGWRVNV-IVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            +I+   R   +EKA NL  +M   G   + + Y+ VI  L +   +D +  + +++++ 
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA--KGVFQQMI 223

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              ++ D    N +I G+   G   + ++ L      GL P   TYA ++  L  +GR  
Sbjct: 224 DRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCR 283

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL-------------------------- 351
           EA   F+ +   G+KP    Y  LL GY   G L                          
Sbjct: 284 EARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMF 343

Query: 352 ---------KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
                    ++A  + ++M + G+ PD  ++  LIDA    GR + A +   +M      
Sbjct: 344 CAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVT 403

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN F++S ++ G    G+W++  ++  E+   G+  D  F+N ++        +  A   
Sbjct: 404 PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M+  G+ P+ I++NTL+  H   GR D A +L + M   G  P   TY I++    +
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCK 523

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------- 566
             R +D   L   M  +G+ P V TY T++    Q+GRF +A E                
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT 583

Query: 567 --------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C     D+A   FR + +   +  ++  N +I A  +  R  +A  +   + 
Sbjct: 584 YNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATIS 643

Query: 619 ENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
             GL PDVVTY  + + LI    + +F  +FS+
Sbjct: 644 AYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSA 676



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 187/393 (47%), Gaps = 7/393 (1%)

Query: 165 LYSILIHALGRSEKLYE--AFL-LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+IL+H       L E  +FL L     ++P    +N +  A A+   +E+A+++ +KM
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ G   D +++  +I +L +  ++D ++LQ  + ++  + +  +  + + ++ G    G
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDAVLQ--FNQMINEGVTPNIFVFSSLVYGLCTVG 420

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              KA          G+      +  ++  L N GR +EA+ + + +   G++P   +YN
Sbjct: 421 KWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYN 480

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+   G + +A  ++  M  +G+ P+E TY++L+  Y  A R + A  + +EM + 
Sbjct: 481 TLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK 540

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ IL G    G +    ++   M +S  + D + YN++++   K N +  A
Sbjct: 541 GVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEA 600

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F R+ S+  + D++T+N +I    K GR + A +LF  +   G  P   TY ++   
Sbjct: 601 FKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAEN 660

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L E+    +   L   M   G  PN      LV
Sbjct: 661 LIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 34/367 (9%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER------SGVLPDEH 371
           EA  +F+EL         +A+N LL    + G    +E VVS   R      S V P+  
Sbjct: 32  EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW-QRTFQVLKE 430
           TYS+LI  +   GR E        +  +  + N  + S++L G  D     + T  +L  
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  PD   YN +I+ F +   +  A   F  M+ +GI P+ +T+ T+ID   K   
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            DRA+ +F++M +RG  P   TYN +I+      +W++V ++L  M   GL P+ +TY  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 551 LVDIYGQSGRFDDAIECLEGL------SDQAVNA------------------FRVMRTDG 586
           L+D   ++GR  +A    + +       D A+ A                    +M  +G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + P+    N +  A+ +     EA  +   M++ GL PDVV++  L+ AL    K  +V 
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC---KLGRVD 388

Query: 647 SSYLFFN 653
            + L FN
Sbjct: 389 DAVLQFN 395



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/372 (18%), Positives = 150/372 (40%), Gaps = 7/372 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +  LI AL +  ++ +A L   +   + +TP    +++L+         EKA  L  ++ 
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVL 433

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + ++ ++ +L    ++  +  Q+L   +    +  +    N ++ G    G 
Sbjct: 434 DQGICVDAVFFNTLMCNLCNEGRVMEA--QRLIDLMIRVGVRPNVISYNTLVAGHCLTGR 491

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A + L +    GL P   TY  ++     + R  +A ++F E+   G+ P    YN 
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G  + G   +A  +   M  S    D +TY+++++        + A  + + +    
Sbjct: 552 ILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKD 611

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + +S  ++ ++      G  +    +   + + G+ PD   Y ++ +   +   L    
Sbjct: 612 PQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFD 671

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M   G  P++   N L+      G   RA     ++ E+ +    +T +++I+L 
Sbjct: 672 GLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731

Query: 521 GEQERWEDVKRL 532
              E     K L
Sbjct: 732 SRGEYQPHAKSL 743


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 238/482 (49%), Gaps = 14/482 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+IL+ AL    +L EA  +    R     P  +TYN L++A  R  +L+ A  ++S MR
Sbjct: 13  YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 72

Query: 221 QDG-YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           ++G    + + ++ ++  L +  +++ +  +K++ E+  + +  D    N ++ G+ K G
Sbjct: 73  EEGNAKPNLVTFNSMVNGLCKAGRMEGA--RKVFDEMVREGLAPDVVSYNTLLSGYCKVG 130

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +++         GL P   T+ ++I A   +G   +A A+  +++E GL+     + 
Sbjct: 131 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 190

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ G+ K G+L DA   V EM + G+ P    Y+ LI+ Y   GR + AR +++EME  
Sbjct: 191 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 250

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   YS I++GY   G     FQ+ ++M   GV PD   Y+ +I    +   L+ A
Sbjct: 251 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 310

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+ ML  G++PD  T+ TLID H K G  ++A  L +EM  +G  P   TY+++IN 
Sbjct: 311 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLING 370

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQ 574
           L +  R ++  RLL  +  +  +P+ + Y  L+ +      F   +      C++GL  +
Sbjct: 371 LSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKE 429

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   ++ M     K      + LI+         +A +  + M  +G  P+  +  +L++
Sbjct: 430 ADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVR 489

Query: 635 AL 636
            L
Sbjct: 490 GL 491



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 168/354 (47%), Gaps = 12/354 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P   TY  ++ AL   GR  EA  V  +++ +G  P    YN L+  + + G L  A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 355 EFVVSEMERSG-VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           E VVS M   G   P+  T++ +++    AGR E AR V  EM      P+   Y+ +L+
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   G    +  V  EM   G+ PD   +  +I    K   L  A+A   +M   G+  
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + +T+  LID   K G  D A    EEM++ G  P    YN +IN   +  R +  + L+
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M A+ + P+VVTY+T++  Y + G  D A +    L+ +       M   G+ P  + 
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ----LNQK-------MLKKGVLPDAIT 293

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +SLI    E++R  +A  + + M + G++PD  TYTTL+    +     K  S
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 347



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 147/287 (51%), Gaps = 12/287 (4%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M R GV P+ +TY++L+ A    GR E A  V+ +M  +   PN+  Y+ ++A +   GE
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 421 WQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                +V+  M+  G  +P+   +N M++   K   +  A   FD M+ EG+ PD +++N
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+  + K G    +  +F EM +RG  P   T+  +I+   +    E    L+  MR +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL  N VT+T L+D + + G  DDA+  +E            MR  G++PS +  N+LIN
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEE-----------MRKCGIQPSVVCYNALIN 229

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + +  R   A  +++ M+   +KPDVVTY+T++    +V      F
Sbjct: 230 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 276



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 169/412 (41%), Gaps = 34/412 (8%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           FT L++   +  N E A AL +          ++ E    +    + +L+   C     +
Sbjct: 154 FTSLIHATCKAGNLEQAVALVA----------QMRERGLRMNEVTFTALIDGFCKK-GFL 202

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           D A   V  ++K  +  S  + Y+ LI+    LGR +   E     + +R+ P  +TY+ 
Sbjct: 203 DDALLAVEEMRKCGIQPSV-VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +IS   +  +L+ A  L  KM + G   D I YS +I+ L    +++ +   +L++ +  
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC--ELFENMLQ 319

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             ++ D      +I G  K G+  KA+         G+ P   TY+ +I  LS S RT E
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379

Query: 319 A----------EAVFEELKESGL-----KPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A          + V + +K   L     K   K+  ALLKG+   G +K+A+ V   M  
Sbjct: 380 AHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLD 439

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                D   YS+LI  +   G    A    K+M  S   PNS     ++ G  + G    
Sbjct: 440 RNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVE 499

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
               ++++ +     D      +ID   K   +   +     M  +G+ P +
Sbjct: 500 ADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 247/539 (45%), Gaps = 38/539 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + SL+   C  N  +D AY V   + +   C   E+ Y+ LIH L  + ++ EA  L   
Sbjct: 232 YTSLILGHCR-NKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEAGRINEALKLFAD 289

Query: 186 SQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                  P   TY  LI A + +    +ALNL ++M++ G   +   Y+++I  L + NK
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  +K+  E+    +       N +I G+ K G    A   L + +     P T TY
Sbjct: 350 MDEA--RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L    +  +A A+  ++ E  L P    YN+L+ G  K+  L+ A  ++S M  
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G++PD+ TYS+ ID     GR E A  +   ++    K N  IY+ ++ GY   G+   
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +L+ M +    P+++ YNV+I+   K   +  A +   +ML+ G++P  +T+  LI 
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G +D A ++F  M   GY P   TY   ++    Q   E+V  ++  M  +G+LP
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTYT L+D Y +            GL+ +A +  + M   G KPS   ++ LI     
Sbjct: 648 DLVTYTVLIDGYARL-----------GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 604 DQRDAE------------------AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + R  E                  A  + + M E+G   DV  Y  L+    + ++  +
Sbjct: 697 ENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEE 755



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 221/488 (45%), Gaps = 50/488 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLY 253
           T+NA+++   +  ++ +A    SK+ Q G H D   Y+ +I    R   +D++  +  + 
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +  C + E+      ++I G  +AG  ++A++           P   TY  +I ALS S
Sbjct: 256 PQKGCQRNEVS---YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR +EA  +F E+KE G +P    Y  L+ G  K   + +A  ++SEM   G++P   TY
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR--------------- 418
           + LID Y   G  + A  +L  ME +   PN+  Y+ ++ G   +               
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 419 --------------------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                                + +  +++L  M  +G+ PD   Y+V IDT  K   +  
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD + ++G++ + + +  LID + K G+ D A  L E M      P + TYN++I 
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L ++++ ++   L+  M   G+ P VVTYT L+    + G FD            A+  
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD-----------HALKV 601

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M + G +P      + ++A+       E   V+  M E G+ PD+VTYT L+    R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 639 VDKFHKVF 646
           +   H+ F
Sbjct: 662 LGLTHRAF 669



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 267/600 (44%), Gaps = 78/600 (13%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ- 154
           +SE     A   S L+R  ++   S R +   L  S + +L + N     A +  +W+  
Sbjct: 34  DSEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIAL 93

Query: 155 ----KHNLCYSYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDD 208
               KHN+ +SY  + +ILI A  LG +EK+          R++      +I +C   +D
Sbjct: 94  RPGFKHNV-HSYSSMLNILIRARLLGVAEKI----------RIS------MIKSCCSIED 136

Query: 209 LEKALNLMSKMRQDG---YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
           +   L +  KM  DG   +      Y+ ++ SL++   ID   ++ +Y E+  ++I  + 
Sbjct: 137 VLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE--MKTVYLELLNNQISPNI 194

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT----------------- 308
              N ++ G+ K G+  +A  +       GL P T TY ++I                  
Sbjct: 195 YTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254

Query: 309 ------------------ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                              L  +GR  EA  +F ++ E    P  + Y  L+      G 
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
             +A  + +EM+  G  P+ HTY++LID      + + AR +L EM      P+   Y+ 
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G     F++L  M+S+   P+T  YN +I    K   +H AMA  ++ML   
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P  IT+N+LI    K    + A  L   M E G  P   TY++ I+ L ++ R E+  
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L  +++A+G+  N V YT L+D Y + G+ D A   LE            M  D   P+
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER-----------MLNDACLPN 543

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH---KVFS 647
           +   N LI    ++++  EA +++  M   G+KP VVTYT L+  +++   F    KVF+
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 234/533 (43%), Gaps = 38/533 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L+   C     ID A+ ++  L + N C      Y+ LI  L +  K+++A  L  +
Sbjct: 372 YNALIDGYCKE-GMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              ++L+P  +TYN+LI    + +DLE A  L+S M ++G   D   YS+ I +L +  +
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ +    L+  ++   ++ +  +   +I G+ K G    A   L         P + TY
Sbjct: 490 VEEA--GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L    +  EA ++  ++   G+KP    Y  L+   +K G    A  V + M  
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD  TY+  + AY + G  E    V+ +M      P+   Y+ ++ GY   G   R
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH------------------AMAAFDR 465
            F  LK M  +G +P  +  +++I      N +                    A+  F++
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+  G   D   +  LI    +  R + A+ L   M+ERG  P    YN +++   +   
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 787

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           + +  RL+  M   GLLP + +Y  LV      G +      +EG +++A   F  + + 
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLV-----CGLY------IEGSNEKAKAVFHGLLSC 836

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           G     +A   LI+   +     E   ++  M+E G +P+ +TY+ L++ L R
Sbjct: 837 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 163/381 (42%), Gaps = 31/381 (8%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF---- 183
           ++ +L+   C     ID+AY+++  +  ++ C      Y++LI  L + +K+ EA     
Sbjct: 511 IYTALIDGYCKV-GKIDVAYSLLERML-NDACLPNSYTYNVLIEGLCKEKKMKEASSLVA 568

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +L+   + T +TY  LI    ++   + AL + + M   GY  D   Y+  + +     
Sbjct: 569 KMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 243 KIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            ++    ++ K+ +E     I  D      +I G+A+ G   +A  FL      G  P  
Sbjct: 629 MLEEVDDVIAKMNEE----GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 301 ATYAAVITALSNSGR---------------TIEAE---AVFEELKESGLKPRTKAYNALL 342
              + +I  LS+  R               T+E E    +FE++ E G       Y AL+
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALI 744

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ +   L++A+ +V  M+  G+ P E  Y+ L+D     G +  A  ++  M  +   
Sbjct: 745 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 804

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P    Y  ++ G    G  ++   V   + S G   D   + V+ID   K + +      
Sbjct: 805 PLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 864

Query: 463 FDRMLSEGIEPDTITWNTLID 483
            D M  +G +P+ +T++ LI+
Sbjct: 865 IDIMEEKGCQPNPLTYSLLIE 885


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 242/503 (48%), Gaps = 30/503 (5%)

Query: 165 LYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           L  +++  LGR  +   A  L      +   L    +  ++ A +R    E+A+ +  KM
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM 235

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+ G     + Y++++    +  +  + +L  L  E+  + +E D    + VI    + G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILG-LLDEMRSNGLEFDEFTCSTVISACGREG 294

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A +F    +  G    T TY +++     +G   EA ++ +E++++   P    YN
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  YV+ G+ ++    +  M R G++P+  TY+ +I+AY  AG+ + A    ++M+ S
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   Y+ IL     +   +    +L +M+S+G  P++  +N M+   G      + 
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M S G EP+  T+N LI  + +CG      +++EEM + G+ PC TTYN ++N 
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY--GQSGRFDDAIE----------- 566
           L  +  WE  + ++ +M+++G  PN  +Y+ +++ Y  G +GR  + IE           
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPS 594

Query: 567 -------CLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                   L     +A+     AF+     G KP  +  NS+++ F +++    A  +L+
Sbjct: 595 WILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLR 654

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            ++E+GL+PD+VTY +LM    R
Sbjct: 655 LIRESGLQPDLVTYNSLMDMYAR 677



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 14/379 (3%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           ++D QL+  ++    +    S A+R L        S     +  ++ A S  G+   A  
Sbjct: 171 KIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAIT 230

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF-VVSEMERSGVLPDEHTYSLLIDAY 380
           +FE+++++GL P    YN +L  Y KMG   +    ++ EM  +G+  DE T S +I A 
Sbjct: 231 MFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC 290

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G  + AR     ++       +F Y+ +L  +   G +     +LKEM+ +   PD 
Sbjct: 291 GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDL 350

Query: 441 HFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
             YN ++  + +    H   A F D M+ +GI P+ IT+ T+I+ + K G+ D+A   F 
Sbjct: 351 VTYNELVAAYVRAG-FHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFR 409

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           +M+E G  P   TYN ++ +LG++ R E++  +L +MR+ G  PN VT+ T++ + G   
Sbjct: 410 QMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN-- 467

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                    +G+       FR M++ G +P+    N+LI A+G      +   + + M +
Sbjct: 468 ---------KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518

Query: 620 NGLKPDVVTYTTLMKALIR 638
            G  P V TY  L+ AL R
Sbjct: 519 AGFTPCVTTYNALLNALAR 537



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 212/482 (43%), Gaps = 18/482 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA  +    ++    P  +TYN L++A  R    E+  + +  M 
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI 377

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + I Y+ VI +  +  K D +L    +++++      +    N ++    K   
Sbjct: 378 RKGIMPNAITYTTVINAYGKAGKEDKAL--SFFRQMKESGCVPNVCTYNAILGMLGKKSR 435

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             + +  L   +  G +P + T+  ++    N G       VF E+K  G +P    +NA
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   D   +  EM ++G  P   TY+ L++A A  G WE+A  V+ +M+   
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKG 555

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN   YS +L  Y   G  +   ++ +E+ +  + P       ++    K   L    
Sbjct: 556 FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGME 615

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF      G +PD + +N+++    K   YDRA E+   ++E G  P   TYN ++++ 
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMY 675

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                    + +L  ++  G  P++V+Y T++  +           C +GL  +A+    
Sbjct: 676 ARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGF-----------CRQGLMQEAIRTLS 724

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G++P  +  N+ +  +      +E   V+ YM ++  +P+ +TY  ++    +  
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGK 784

Query: 641 KF 642
           K+
Sbjct: 785 KY 786



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 186/428 (43%), Gaps = 49/428 (11%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           R+ + P  +TY  +I+A  +    +KAL+   +M++ G   +   Y+ ++  L + ++++
Sbjct: 378 RKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLE 437

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM-----RFLGMAQGVGLSPKT 300
             +      ++ CD +  +G   N V      A   +K M     R     +  G  P  
Sbjct: 438 EMI------DMLCD-MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNR 490

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T+ A+I A    G  I+   ++EE+ ++G  P    YNALL    + G  + AE V+ +
Sbjct: 491 DTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILD 550

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA------------------- 401
           M+  G  P+E +YSL+++ YA  G       + +E+   H                    
Sbjct: 551 MKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRA 610

Query: 402 ----------------KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
                           KP+  +++ +L+ +     + R  ++L+ ++ SG++PD   YN 
Sbjct: 611 LMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNS 670

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D + +             +   G +PD +++NT+I    + G    A     EM   G
Sbjct: 671 LMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC  TYN  +     +  + +V+ ++  M      PN +TY  +VD Y +  ++ +A+
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAM 790

Query: 566 ECLEGLSD 573
           + +  +++
Sbjct: 791 DFVSNITE 798



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/413 (21%), Positives = 181/413 (43%), Gaps = 42/413 (10%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ +I+A G++ K  +A    ++ +     P   TYNA++    +   LE+ ++++  
Sbjct: 386 ITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR +G   + + ++ ++      NK     + ++++E++    E +    N +I  + + 
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCG--NKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G     ++        G +P   TY A++ AL+  G    AE+V  ++K  G KP   +Y
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563

Query: 339 NALLKGYVKMGYLKDAEFVVSE----------------------------MERS------ 364
           + +L  Y K G  +  E +  E                            MER+      
Sbjct: 564 SLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK 623

Query: 365 -GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD   ++ ++  +A    ++ A  +L+ +  S  +P+   Y+ ++  Y   GE  +
Sbjct: 624 HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWK 683

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LK ++ SG +PD   YN +I  F +   +  A+     M   GI P  +T+NT + 
Sbjct: 684 GEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +   G +   EE+   M +    P   TY I+++   + +++++    + N+
Sbjct: 744 GYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 17/237 (7%)

Query: 419 GEWQRTFQVLK----EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           G W+R   + K     + S   + D     +M+   G+ +    A+   D +  E    D
Sbjct: 149 GNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLD 208

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLL 533
              W T++  + + G+Y+RA  +FE+M++ G  P   TYN+M+++ G+  R W  +  LL
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             MR+ GL  +  T +T++   G+           EGL D+A   F  ++++G       
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGR-----------EGLLDEARKFFARLKSEGYVAGTFT 317

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            NSL+  FG+    +EA ++L+ M++N   PD+VTY  L+ A +R   FH+  + ++
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAG-FHEEGADFI 373


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 239/542 (44%), Gaps = 58/542 (10%)

Query: 151 SWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLE 210
           S + +  L Y   L   I+   +  +  L+E+ ++  R   TP+ +N L SA AR    +
Sbjct: 58  SSITEAKLSYKERLRNGIVDIKVNDAIDLFES-MIQSRPLPTPIDFNRLCSAVARTKQYD 116

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYK-EIECDKIE----- 262
             L     M  +G   D    +++I    R  K+    S+L + +K   E D I      
Sbjct: 117 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 176

Query: 263 ----LDGQL---------------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
               L+G++                     ++ +I G    G  S+A+  +      G  
Sbjct: 177 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 236

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  V+  L  SG +  A  +F +++E  +K     Y+ ++    K G   DA  +
Sbjct: 237 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 296

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
            +EME  G+  D  TYS LI    N G+W+    +L+EM   +  P+   +S ++  +  
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+     ++  EM + G+ PDT  YN +ID F K NCLH A   FD M+S+G EPD +T
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++ LI+ + K  R D    LF E+  +G  P T TYN ++    +  +    K L   M 
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------D 573
           ++G+ P+VVTY  L+D    +G  + A+E  E +                         D
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A + F  +   G+KP  +  N +I    +    +EA  + + MKE+G  PD  TY  L+
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596

Query: 634 KA 635
           +A
Sbjct: 597 RA 598



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 8/399 (2%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S LI+ L    ++ EA +L  R      +   +TY  +++   ++ +   AL+L  KM +
Sbjct: 208 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 267

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                  + YS+VI SL +    D +L   L+ E+E   I+ D    + +I G    G  
Sbjct: 268 RNIKASVVQYSIVIDSLCKDGSFDDAL--SLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
               + L    G  + P   T++A+I      G+ +EA+ ++ E+   G+ P T  YN+L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G+ K   L +A  +   M   G  PD  TYS+LI++Y  A R +    + +E+     
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN+  Y+ ++ G+   G+     ++ +EM S GV P    Y +++D       L+ A+ 
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 505

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F++M    +      +N +I       + D A  LF  + ++G  P   TYN+MI  L 
Sbjct: 506 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 565

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY-GQSG 559
           ++    +   L   M+  G  P+  TY  L+  + G SG
Sbjct: 566 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 9/400 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +  +L  LC S +S  LA  +   +++ N+  S  + YSI+I +L +     +A  L   
Sbjct: 242 YGPVLNRLCKSGNSA-LALDLFRKMEERNIKASV-VQYSIVIDSLCKDGSFDDALSLFNE 299

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +  +     TY++LI     +   +    ++ +M       D + +S +I    +  K
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  ++LY E+    I  D    N +I GF K     +A +   +    G  P   TY
Sbjct: 360 LLEA--KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 417

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + +I +   + R  +   +F E+   GL P T  YN L+ G+ + G L  A+ +  EM  
Sbjct: 418 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P   TY +L+D   + G    A  + ++M+ S       IY+ I+ G  +  +   
Sbjct: 478 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 537

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+PD   YNVMI    K   L  A   F +M  +G  PD  T+N LI 
Sbjct: 538 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 597

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            H        + EL EEM+  G+   ++T  ++I++L ++
Sbjct: 598 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 637



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 14/359 (3%)

Query: 288 LGMAQGV---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           LG  +G+   G+     T   +I       + + A +V     + G +P T  ++ L+ G
Sbjct: 119 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 178

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           +   G + +A  +V  M      PD  T S LI+     GR   A +++  M     +P+
Sbjct: 179 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 238

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y  +L      G       + ++M+   ++     Y+++ID+  K      A++ F+
Sbjct: 239 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 298

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M  +GI+ D +T+++LI      G++D   ++  EM  R   P   T++ +I++  ++ 
Sbjct: 299 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 358

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           +  + K L   M  +G+ P+ +TY +L+D +           C E    +A   F +M +
Sbjct: 359 KLLEAKELYNEMITRGIAPDTITYNSLIDGF-----------CKENCLHEANQMFDLMVS 407

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            G +P  +  + LIN++ + +R  +   + + +   GL P+ +TY TL+    +  K +
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 466



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 11/292 (3%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + DA  +   M +S  LP    ++ L  A A   +++      K ME++  + + +  + 
Sbjct: 80  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++  Y  + +    F VL      G EPDT  ++ +++ F     +  A+A  DRM+   
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD +T +TLI+     GR   A  L + M E G+ P   TY  ++N L +        
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   M  + +  +VV Y+ ++D   + G FDDA+           + F  M   G+K  
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL-----------SLFNEMEMKGIKAD 308

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +  +SLI     D +  +   +L+ M    + PDVVT++ L+   ++  K 
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 360


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 260/544 (47%), Gaps = 26/544 (4%)

Query: 107 PSSLNRVEFKLAESYRA-VPAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL 164
           P  L+   + LA    A +P+P L   LLK +  +  + +        L +  L     +
Sbjct: 121 PHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSI 180

Query: 165 LYSILIHA---LGRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKM 219
           ++ +L+     L R+++ ++ F + + + + P   T N ++S   + + +E A  L ++M
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +         +++++  L +  K+  +  ++    +E    + +    N +I G++  G
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKA--REFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +   A R L   +  G+ P + TY ++I+ +   GR  EA  +F+++ E GL P    YN
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY   G L+ A     EM + G++P   TY+LL+ A    GR   A  ++KEM   
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P++  Y+ ++ GY   G  ++ F +  EM S G+EP    Y  +I    + N +  A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+++L +G+ PD I +N ++D H   G  +RA  L +EM  +   P   T+N ++  
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              + + E+ + LL  M+ +G+ P+ ++Y TL+  YG+ G   D              AF
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKD--------------AF 584

Query: 580 RV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           RV   M + G  P+ L  N+LI    ++Q    A  +L+ M   G+ PD  TY +L++ +
Sbjct: 585 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644

Query: 637 IRVD 640
             VD
Sbjct: 645 GNVD 648



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 174/351 (49%), Gaps = 24/351 (6%)

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA   F  +KE G+ P+ +  N +L  ++K+  ++ A  + +EM R  +    +T++
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           ++++     G+ + AR  +  ME    KPN   Y+ I+ GY  RG  +   ++L  M+  
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+EPD++ Y  +I    K   L  A   FD+M+  G+ P+ +T+NTLID +   G  +RA
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
               +EM ++G  P  +TYN++++ L  + R  +   ++  MR +G++P+ +TY  L++ 
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433

Query: 555 YGQSGR----FDDAIECL-EGLS-------------------DQAVNAFRVMRTDGLKPS 590
           Y + G     FD   E L +G+                     +A + F  +   G+ P 
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +  N++++    +     AF +L+ M    + PD VT+ TLM+   R  K
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 42/331 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI  + +  +L EA  L  +     L P  +TYN LI       DLE+A +   +M 
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y+L++ +L    ++  +    + KE+    I  D    N +I G+++ G+
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEA--DDMIKEMRKKGIIPDAITYNILINGYSRCGN 439

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A KA          G+ P   TY ++I  LS   R  EA+ +FE++ + G+ P    +NA
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+   G ++ A  ++ EM+R  V PDE T++ L+      G+ E AR++L EM+   
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQV--------------------------------- 427
            KP+   Y+ +++GY  RG+ +  F+V                                 
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619

Query: 428 --LKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             LKEM + G+ PD   Y  +I+  G  + L
Sbjct: 620 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM    +    + +N+M++   K   L  A      M   G +P+ +++NT+I  +   G
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             + A  + + M+ +G  P + TY  +I+ + ++ R E+   L   M   GL+PN VTY 
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+D Y           C +G  ++A +    M   G+ PS    N L++A   + R  E
Sbjct: 359 TLIDGY-----------CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 407

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A  +++ M++ G+ PD +TY  L+    R     K F
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M  +GI P   T N ++    K  R + A  L+ EM          T+NIM+N
Sbjct: 198 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 257

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +L ++ + +  +  +G M   G  PNVV+Y T++  Y   G  + A   L+         
Sbjct: 258 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA-------- 309

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              MR  G++P +    SLI+   ++ R  EA  +   M E GL P+ VTY TL+     
Sbjct: 310 ---MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 366

Query: 639 VDKFHKVFS 647
                + FS
Sbjct: 367 KGDLERAFS 375



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 42/196 (21%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L R  ++ EA  L ++   Q ++P  + +NA++     N ++E+A  L+ +M 
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + ++ ++Q   R  K++ +  + L  E++   I+ D    N +I G+ + GD
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEA--RMLLDEMKRRGIKPDHISYNTLISGYGRRGD 579

Query: 281 ASKAMR-----------------------------------FLGMAQGVGLSPKTATYAA 305
              A R                                    L      G+SP  +TY +
Sbjct: 580 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 639

Query: 306 VITALSNSGRTIEAEA 321
           +I  + N    +E  A
Sbjct: 640 LIEGMGNVDTLVEDNA 655


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 242/503 (48%), Gaps = 30/503 (5%)

Query: 165 LYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           L  +++  LGR  +   A  L      +   L    +  ++ A +R    E+A+ +  KM
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM 235

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+ G     + Y++++    +  +  + +L  L  E+  + +E D    + VI    + G
Sbjct: 236 RKTGLSPTLVTYNVMLDVYGKMGRSWNKILG-LLDEMRSNGLEFDEFTCSTVISACGREG 294

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A +F    +  G    T TY +++     +G   EA ++ +E++++   P    YN
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  YV+ G+ ++    +  M R G++P+  TY+ +I+AY  AG+ + A    ++M+ S
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   Y+ IL     +   +    +L +M+S+G  P++  +N M+   G      + 
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M S G EP+  T+N LI  + +CG      +++EEM + G+ PC TTYN ++N 
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA 534

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY--GQSGRFDDAIE----------- 566
           L  +  WE  + ++ +M+++G  PN  +Y+ +++ Y  G +GR  + IE           
Sbjct: 535 LARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPS 594

Query: 567 -------CLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                   L     +A+     AF+     G KP  +  NS+++ F +++    A  +L+
Sbjct: 595 WILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLR 654

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            ++E+GL+PD+VTY +LM    R
Sbjct: 655 LIRESGLQPDLVTYNSLMDMYAR 677



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 184/379 (48%), Gaps = 14/379 (3%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           ++D QL+  ++    +    S A+R L        S     +  ++ A S  G+   A  
Sbjct: 171 KIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAIT 230

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF-VVSEMERSGVLPDEHTYSLLIDAY 380
           +FE+++++GL P    YN +L  Y KMG   +    ++ EM  +G+  DE T S +I A 
Sbjct: 231 MFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC 290

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G  + AR     ++       +F Y+ +L  +   G +     +LKEM+ +   PD 
Sbjct: 291 GREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDL 350

Query: 441 HFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
             YN ++  + +    H   A F D M+ +GI P+ IT+ T+I+ + K G+ D+A   F 
Sbjct: 351 VTYNELVAAYVRAG-FHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFR 409

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           +M+E G  P   TYN ++ +LG++ R E++  +L +MR+ G  PN VT+ T++ + G   
Sbjct: 410 QMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGN-- 467

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                    +G+       FR M++ G +P+    N+LI A+G      +   + + M +
Sbjct: 468 ---------KGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIK 518

Query: 620 NGLKPDVVTYTTLMKALIR 638
            G  P V TY  L+ AL R
Sbjct: 519 AGFTPCVTTYNALLNALAR 537



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/482 (22%), Positives = 212/482 (43%), Gaps = 18/482 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA  +    ++    P  +TYN L++A  R    E+  + +  M 
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI 377

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + I Y+ VI +  +  K D +L    +++++      +    N ++    K   
Sbjct: 378 RKGIMPNAITYTTVINAYGKAGKEDKAL--SFFRQMKESGCVPNVCTYNAILGMLGKKSR 435

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             + +  L   +  G +P + T+  ++    N G       VF E+K  G +P    +NA
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNA 495

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   D   +  EM ++G  P   TY+ L++A A  G WE+A  V+ +M+   
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKG 555

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN   YS +L  Y   G  +   ++ +E+ +  + P       ++    K   L    
Sbjct: 556 FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGME 615

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF      G +PD + +N+++    K   YDRA E+   ++E G  P   TYN ++++ 
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMY 675

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                    + +L  ++  G  P++V+Y T++  +           C +GL  +A+    
Sbjct: 676 ARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGF-----------CRQGLMQEAIRTLS 724

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G++P  +  N+ +  +      +E   V+ YM ++  +P+ +TY  ++    +  
Sbjct: 725 EMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGK 784

Query: 641 KF 642
           K+
Sbjct: 785 KY 786



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 186/428 (43%), Gaps = 49/428 (11%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           R+ + P  +TY  +I+A  +    +KAL+   +M++ G   +   Y+ ++  L + ++++
Sbjct: 378 RKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLE 437

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM-----RFLGMAQGVGLSPKT 300
             +      ++ CD +  +G   N V      A   +K M     R     +  G  P  
Sbjct: 438 EMI------DMLCD-MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNR 490

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T+ A+I A    G  I+   ++EE+ ++G  P    YNALL    + G  + AE V+ +
Sbjct: 491 DTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILD 550

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA------------------- 401
           M+  G  P+E +YSL+++ YA  G       + +E+   H                    
Sbjct: 551 MKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRA 610

Query: 402 ----------------KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
                           KP+  +++ +L+ +     + R  ++L+ ++ SG++PD   YN 
Sbjct: 611 LMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNS 670

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D + +             +   G +PD +++NT+I    + G    A     EM   G
Sbjct: 671 LMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISG 730

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC  TYN  +     +  + +V+ ++  M      PN +TY  +VD Y +  ++ +A+
Sbjct: 731 IRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAM 790

Query: 566 ECLEGLSD 573
           + +  +++
Sbjct: 791 DFVSNITE 798



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/413 (21%), Positives = 181/413 (43%), Gaps = 42/413 (10%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ +I+A G++ K  +A    ++ +     P   TYNA++    +   LE+ ++++  
Sbjct: 386 ITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR +G   + + ++ ++      NK     + ++++E++    E +    N +I  + + 
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCG--NKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRC 503

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G     ++        G +P   TY A++ AL+  G    AE+V  ++K  G KP   +Y
Sbjct: 504 GSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSY 563

Query: 339 NALLKGYVKMGYLKDAEFVVSE----------------------------MERS------ 364
           + +L  Y K G  +  E +  E                            MER+      
Sbjct: 564 SLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK 623

Query: 365 -GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD   ++ ++  +A    ++ A  +L+ +  S  +P+   Y+ ++  Y   GE  +
Sbjct: 624 HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWK 683

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LK ++ SG +PD   YN +I  F +   +  A+     M   GI P  +T+NT + 
Sbjct: 684 GEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +   G +   EE+   M +    P   TY I+++   + +++++    + N+
Sbjct: 744 GYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNI 796



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 17/237 (7%)

Query: 419 GEWQRTFQVLK----EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           G W+R   + K     + S   + D     +M+   G+ +    A+   D +  E    D
Sbjct: 149 GNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLD 208

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLL 533
              W T++  + + G+Y+RA  +FE+M++ G  P   TYN+M+++ G+  R W  +  LL
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             MR+ GL  +  T +T++   G+           EGL D+A   F  ++++G       
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGR-----------EGLLDEARKFFARLKSEGYVAGTFT 317

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            NSL+  FG+    +EA ++L+ M++N   PD+VTY  L+ A +R   FH+  + ++
Sbjct: 318 YNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAG-FHEEGADFI 373


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 245/537 (45%), Gaps = 42/537 (7%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFL 184
           SLLK L   +   + A A++ W        +  L   +++ ALGR  +      L +   
Sbjct: 108 SLLKAL-ELSGHWEWALALLRWAGAEGAADASAL--EMVVRALGREGQHDAVCALLDEMP 164

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L    RL    Y  ++ A +R    E+A+ L +++R+ G     + Y++V+    R  + 
Sbjct: 165 LPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRS 224

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
              ++  L  E+    +E D    + VI    + G   +A+ F    +  G +P   TY 
Sbjct: 225 WPRIVA-LLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYN 283

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A++     +G   EA  V +E+++ G +P    YN L   Y + G+ ++A   +  M   
Sbjct: 284 ALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSK 343

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+LP+  TY+ ++ AY N G+ + A  +  +M+ S   PN   Y+ IL     +  +   
Sbjct: 344 GLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVM 403

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L EM  SG  P+   +N M+   GK     +     + M S G+E    T+NTLI  
Sbjct: 404 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAA 463

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + +CG    A +++ EM   G+ PC TTYN ++N+L  Q  W   + ++  MR +G  PN
Sbjct: 464 YGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 523

Query: 545 VVTYTTLVDIYGQSGRFD--DAIE------------------------C--LEGLSDQAV 576
             +Y+ L+  Y + G     DAIE                        C  L G+     
Sbjct: 524 DQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIE---- 579

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            AF+ ++  G  P  +  NS+++ + ++   ++   +   +K++GL PD++TY +LM
Sbjct: 580 KAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLM 636



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 135/580 (23%), Positives = 246/580 (42%), Gaps = 98/580 (16%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+  E F   +RQ + P  +TYN ++    R      + + L+ +M
Sbjct: 176 YTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEM 235

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQ-------- 250
           R  G   D    S VI +  R   +D                     ++LLQ        
Sbjct: 236 RAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNY 295

Query: 251 ----KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               ++ KE+E D  + D    N++   +A+AG   +A + L      GL P   TY  V
Sbjct: 296 TEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTV 355

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +TA  N G+  EA A+F+++K+SG  P    YN +L    K         ++ EM RSG 
Sbjct: 356 MTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGC 415

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  T++ ++      G  +    VL+ M+    + +   Y+ ++A Y   G     F+
Sbjct: 416 TPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFK 475

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH- 485
           +  EM S+G  P    YN +++   +      A +   +M ++G +P+  +++ L+ C+ 
Sbjct: 476 MYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYA 535

Query: 486 ----------------------------------FKCGRYDRAEELFEEMQERGYFPCTT 511
                                             FKC R    E+ F+E++ RGY P   
Sbjct: 536 KGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLV 595

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR----------- 560
            +N M+++  +   +  V  +  +++  GL P+++TY +L+D+Y +              
Sbjct: 596 IFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQL 655

Query: 561 -----------FDDAIE--CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                      ++  I   C +GL  +A      M  DG+ P  +  ++L+  +   +  
Sbjct: 656 KSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMF 715

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +EA  V+ YM ++ LKP  +TY  ++ +  +  +F +  S
Sbjct: 716 SEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARS 755



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 188/417 (45%), Gaps = 7/417 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A G   K+ EA  L  + + +       TYN ++    +       L ++ +M 
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS 411

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + ++ ++    +    D   + ++ + ++   +EL     N +I  + + G 
Sbjct: 412 RSGCTPNRVTWNTMLAVCGKRGMED--YVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGS 469

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A +        G +P   TY A++  LS  G    A+++  +++  G KP  ++Y+ 
Sbjct: 470 RTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSL 529

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+ Y K G +   + +  E+    V P       L+ A     R        +E++   
Sbjct: 530 LLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARG 589

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+  I++ +L+ Y   G + +  ++   +K SG+ PD   YN ++D + K +    A 
Sbjct: 590 YNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAE 649

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              +++ S  ++PD +++NT+I+   K G    A+ +  EM   G  PC  TY+ ++   
Sbjct: 650 KILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 709

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
              E + + + ++  M    L P  +TY  +VD Y ++ RF++A   L  +S+   N
Sbjct: 710 ASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPN 766



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 19/279 (6%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI----YSRILAGYRDRGEWQRT 424
           D     +++ A    G+ ++   +L EM +    P S +    Y+ +L      G ++R 
Sbjct: 136 DASALEMVVRALGREGQHDAVCALLDEMPLP---PGSRLDVRAYTTVLHALSRAGRYERA 192

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYN-CLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            ++  E++  GV P    YNV++D +G+        +A  D M + G+EPD  T +T+I 
Sbjct: 193 VELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIA 252

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G  D A   FE+++ RG+ PC  TYN ++ + G+   + +  R+L  M   G  P
Sbjct: 253 ACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQP 312

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           + VTY  L   Y ++G +++A +CL+            M + GL P+    N+++ A+G 
Sbjct: 313 DAVTYNELAGTYARAGFYEEAAKCLD-----------TMTSKGLLPNAFTYNTVMTAYGN 361

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +  EA A+   MK++G  P+V TY  ++  L +  +F
Sbjct: 362 IGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRF 400



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 49/268 (18%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTIT 477
           G W+    +L+   + G   D     +++   G+        A  D M L  G   D   
Sbjct: 117 GHWEWALALLRWAGAEGAA-DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRA 175

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGNM 536
           + T++    + GRY+RA ELF E++ +G  P   TYN+++++ G   R W  +  LL  M
Sbjct: 176 YTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEM 235

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           RA G+ P+  T +T++           A  C +GL D+AV  F  ++  G  P  +  N+
Sbjct: 236 RAAGVEPDDFTASTVI-----------AACCRDGLVDEAVAFFEDLKARGHTPCVVTYNA 284

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDV------------------------------ 626
           L+  FG+     EA  VL+ M+++G +PD                               
Sbjct: 285 LLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344

Query: 627 -----VTYTTLMKALIRVDKFHKVFSSY 649
                 TY T+M A   + K  +  + +
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALF 372


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 239/542 (44%), Gaps = 58/542 (10%)

Query: 151 SWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLE 210
           S + +  L Y   L   I+   +  +  L+E+ ++  R   TP+ +N L SA AR    +
Sbjct: 29  SSITEAKLSYKERLRNGIVDIKVNDAIDLFES-MIQSRPLPTPIDFNRLCSAVARTKQYD 87

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYK-EIECDKIE----- 262
             L     M  +G   D    +++I    R  K+    S+L + +K   E D I      
Sbjct: 88  LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147

Query: 263 ----LDGQL---------------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
               L+G++                     ++ +I G    G  S+A+  +      G  
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  V+  L  SG +  A  +F +++E  +K     Y+ ++    K G   DA  +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
            +EME  G+  D  TYS LI    N G+W+    +L+EM   +  P+   +S ++  +  
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+     ++  EM + G+ PDT  YN +ID F K NCLH A   FD M+S+G EPD +T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++ LI+ + K  R D    LF E+  +G  P T TYN ++    +  +    K L   M 
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------D 573
           ++G+ P+VVTY  L+D    +G  + A+E  E +                         D
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A + F  +   G+KP  +  N +I    +    +EA  + + MKE+G  PD  TY  L+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567

Query: 634 KA 635
           +A
Sbjct: 568 RA 569



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 8/399 (2%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S LI+ L    ++ EA +L  R      +   +TY  +++   ++ +   AL+L  KM +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                  + YS+VI SL +    D +L   L+ E+E   I+ D    + +I G    G  
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDAL--SLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
               + L    G  + P   T++A+I      G+ +EA+ ++ E+   G+ P T  YN+L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G+ K   L +A  +   M   G  PD  TYS+LI++Y  A R +    + +E+     
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN+  Y+ ++ G+   G+     ++ +EM S GV P    Y +++D       L+ A+ 
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F++M    +      +N +I       + D A  LF  + ++G  P   TYN+MI  L 
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY-GQSG 559
           ++    +   L   M+  G  P+  TY  L+  + G SG
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 9/400 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +  +L  LC S +S  LA  +   +++ N+  S  + YSI+I +L +     +A  L   
Sbjct: 213 YGPVLNRLCKSGNSA-LALDLFRKMEERNIKASV-VQYSIVIDSLCKDGSFDDALSLFNE 270

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +  +     TY++LI     +   +    ++ +M       D + +S +I    +  K
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  ++LY E+    I  D    N +I GF K     +A +   +    G  P   TY
Sbjct: 331 LLEA--KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + +I +   + R  +   +F E+   GL P T  YN L+ G+ + G L  A+ +  EM  
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P   TY +L+D   + G    A  + ++M+ S       IY+ I+ G  +  +   
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+PD   YNVMI    K   L  A   F +M  +G  PD  T+N LI 
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            H        + EL EEM+  G+   ++T  ++I++L ++
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 14/359 (3%)

Query: 288 LGMAQGV---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           LG  +G+   G+     T   +I       + + A +V     + G +P T  ++ L+ G
Sbjct: 90  LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           +   G + +A  +V  M      PD  T S LI+     GR   A +++  M     +P+
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y  +L      G       + ++M+   ++     Y+++ID+  K      A++ F+
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M  +GI+ D +T+++LI      G++D   ++  EM  R   P   T++ +I++  ++ 
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           +  + K L   M  +G+ P+ +TY +L+D +           C E    +A   F +M +
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGF-----------CKENCLHEANQMFDLMVS 378

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            G +P  +  + LIN++ + +R  +   + + +   GL P+ +TY TL+    +  K +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 24/318 (7%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + DA  +   M +S  LP    ++ L  A A   +++      K ME++  + + +  + 
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++  Y  + +    F VL      G EPDT  ++ +++ F     +  A+A  DRM+   
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD +T +TLI+     GR   A  L + M E G+ P   TY  ++N L +        
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            L   M  + +  +VV Y+ ++D   + G FDDA+                         
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C +G  D      R M    + P  +  ++LI+ F ++ +  EA  +   M   G+ PD 
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350

Query: 627 VTYTTLMKALIRVDKFHK 644
           +TY +L+    + +  H+
Sbjct: 351 ITYNSLIDGFCKENCLHE 368


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 260/544 (47%), Gaps = 26/544 (4%)

Query: 107 PSSLNRVEFKLAESYRA-VPAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL 164
           P  L+   + LA    A +P+P L   LLK +  +  + +        L +  L     +
Sbjct: 99  PHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKSSI 158

Query: 165 LYSILIHA---LGRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKM 219
           ++ +L+     L R+++ ++ F + + + + P   T N ++S   + + +E A  L ++M
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +         +++++  L +  K+  +  ++    +E    + +    N +I G++  G
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKA--REFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +   A R L   +  G+ P + TY ++I+ +   GR  EA  +F+++ E GL P    YN
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY   G L+ A     EM + G++P   TY+LL+ A    GR   A  ++KEM   
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P++  Y+ ++ GY   G  ++ F +  EM S G+EP    Y  +I    + N +  A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+++L +G+ PD I +N ++D H   G  +RA  L +EM  +   P   T+N ++  
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              + + E+ + LL  M+ +G+ P+ ++Y TL+  YG+ G   D              AF
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKD--------------AF 562

Query: 580 RV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           RV   M + G  P+ L  N+LI    ++Q    A  +L+ M   G+ PD  TY +L++ +
Sbjct: 563 RVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622

Query: 637 IRVD 640
             VD
Sbjct: 623 GNVD 626



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 174/351 (49%), Gaps = 24/351 (6%)

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA   F  +KE G+ P+ +  N +L  ++K+  ++ A  + +EM R  +    +T++
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           ++++     G+ + AR  +  ME    KPN   Y+ I+ GY  RG  +   ++L  M+  
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+EPD++ Y  +I    K   L  A   FD+M+  G+ P+ +T+NTLID +   G  +RA
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
               +EM ++G  P  +TYN++++ L  + R  +   ++  MR +G++P+ +TY  L++ 
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411

Query: 555 YGQSGR----FDDAIECL-EGLS-------------------DQAVNAFRVMRTDGLKPS 590
           Y + G     FD   E L +G+                     +A + F  +   G+ P 
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +  N++++    +     AF +L+ M    + PD VT+ TLM+   R  K
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 42/331 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI  + +  +L EA  L  +     L P  +TYN LI       DLE+A +   +M 
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y+L++ +L    ++  +    + KE+    I  D    N +I G+++ G+
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEA--DDMIKEMRKKGIIPDAITYNILINGYSRCGN 417

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A KA          G+ P   TY ++I  LS   R  EA+ +FE++ + G+ P    +NA
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+   G ++ A  ++ EM+R  V PDE T++ L+      G+ E AR++L EM+   
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQV--------------------------------- 427
            KP+   Y+ +++GY  RG+ +  F+V                                 
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597

Query: 428 --LKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             LKEM + G+ PD   Y  +I+  G  + L
Sbjct: 598 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM    +    + +N+M++   K   L  A      M   G +P+ +++NT+I  +   G
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             + A  + + M+ +G  P + TY  +I+ + ++ R E+   L   M   GL+PN VTY 
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+D Y           C +G  ++A +    M   G+ PS    N L++A   + R  E
Sbjct: 337 TLIDGY-----------CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 385

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A  +++ M++ G+ PD +TY  L+    R     K F
Sbjct: 386 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M  +GI P   T N ++    K  R + A  L+ EM          T+NIM+N
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 235

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +L ++ + +  +  +G M   G  PNVV+Y T++  Y   G  + A   L+         
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA-------- 287

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              MR  G++P +    SLI+   ++ R  EA  +   M E GL P+ VTY TL+     
Sbjct: 288 ---MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 344

Query: 639 VDKFHKVFS 647
                + FS
Sbjct: 345 KGDLERAFS 353



 Score = 45.4 bits (106), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 42/196 (21%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L R  ++ EA  L ++   Q ++P  + +NA++     N ++E+A  L+ +M 
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + ++ ++Q   R  K++ +  + L  E++   I+ D    N +I G+ + GD
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEA--RMLLDEMKRRGIKPDHISYNTLISGYGRRGD 557

Query: 281 ASKAMR-----------------------------------FLGMAQGVGLSPKTATYAA 305
              A R                                    L      G+SP  +TY +
Sbjct: 558 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 617

Query: 306 VITALSNSGRTIEAEA 321
           +I  + N    +E  A
Sbjct: 618 LIEGMGNVDTLVEDNA 633


>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
 gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
          Length = 384

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 191/363 (52%), Gaps = 14/363 (3%)

Query: 295 GLSPKTATYAAVITA-LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           G      TY  +I   L    +   A  + E +KESG KP    YN L+ G V  G L+ 
Sbjct: 12  GCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEA 71

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           AE ++ +M+R  V  +  TY+ LI  YAN GR +  R + +EM+     PNS+ Y+ ++ 
Sbjct: 72  AEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQ 131

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY  +G ++   ++  EM   G   D H YN+ I  +GK   L       D M ++G+ P
Sbjct: 132 GYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPP 191

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+NTL+D + K   + +A E+  EM E GY P   TYNIM++   +++   +  +L 
Sbjct: 192 DQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLF 251

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            N++++G++PN+VTY+ ++ +YG+ G + +A +    L D+ + A       G  P  +A
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK----LWDEMIEA-------GCIPCIIA 300

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + LI ++G      EA A  Q M+++G+ PD   YT LM A  +  +  +  +  L+F 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE--AELLYFE 358

Query: 654 IYK 656
           + K
Sbjct: 359 MTK 361



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 196/396 (49%), Gaps = 14/396 (3%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQS-LTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           A +L  +M +DG     + Y+++I   L + +K+D +L  +L + ++    + D  L N 
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHAL--RLLEVMKESGKKPDEILYNC 58

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           ++ G   +G    A + L   +   +S    TY  +I   +N+GR  +   +F+E+K+ G
Sbjct: 59  LVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKG 118

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P +  YNAL++GY + G  K+A  +  EM+  G   D HTY++ I  Y   G  E   
Sbjct: 119 ESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L EM+     P+   Y+ +L  Y  +  + +  ++L+EM  +G  P+   YN+M+ + 
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A   F+ + S+G+ P+ +T++ ++  + + G Y  A +L++EM E G  PC 
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             Y+ +I   G    +++      +MR  G++P+   YT L+D YG++GR  +A E L  
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREA-ELL-- 355

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
                   +  M  +G  P  +    L+ AF    R
Sbjct: 356 --------YFEMTKEGFVPDGITYGILVRAFANAGR 383



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 6/258 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKL 252
           TYNALI    R    ++AL L  +M  DG  C  D   Y++ I    +   ++   +++L
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEM--DGVGCAKDVHTYNIAIAMYGKRGLLED--MERL 180

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E++   +  D    N ++  +AK     KA   L      G  P   TY  ++++   
Sbjct: 181 LDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARK 240

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
                EA  +FE LK  G+ P    Y+A+L  Y + G   +A  +  EM  +G +P    
Sbjct: 241 EQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIA 300

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           YS LI++Y + G ++ A    ++M  S   P++ IY+ ++  Y   G  +    +  EM 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMT 360

Query: 433 SSGVEPDTHFYNVMIDTF 450
             G  PD   Y +++  F
Sbjct: 361 KEGFVPDGITYGILVRAF 378



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 2/192 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN L+   A+     KA  ++ +M + GY  +   Y++++ S  +   +  +   +L+
Sbjct: 194 VTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEA--TQLF 251

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++   +  +    + ++  + + G  ++A +        G  P    Y+ +I +  + 
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHH 311

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA A F+++++SG+ P TK Y AL+  Y K G  ++AE +  EM + G +PD  TY
Sbjct: 312 GMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITY 371

Query: 374 SLLIDAYANAGR 385
            +L+ A+ANAGR
Sbjct: 372 GILVRAFANAGR 383



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 4/158 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN ++S+  +   + +A  L   ++  G   + + YS ++    R      +   KL+ 
Sbjct: 230 TYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEA--AKLWD 287

Query: 255 E-IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E IE   I       + +I  +   G   +A+      +  G+ P T  Y A++ A   +
Sbjct: 288 EMIEAGCIPCI-IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKA 346

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           GR  EAE ++ E+ + G  P    Y  L++ +   G L
Sbjct: 347 GRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 217/443 (48%), Gaps = 17/443 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TY +LI    +N +L+ A  +  +M +DG   + + YS +I  L    +++ ++   + 
Sbjct: 238 FTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAM--DML 295

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    IE         IV    AG + +A++ LG  +  G  P   TY A+I+ LS  
Sbjct: 296 EEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRD 355

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   A  V+ ++   GL P    Y+AL+      G  + A  +   M     LP+  TY
Sbjct: 356 GKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++I  + + G  + A  +  +M  +   PN   Y+ I+  Y  +G      ++L+ MK 
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKG 475

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G++ DT  Y  +I  F +   L HA + F+ M+  GI P+ +T+N +I+ +    + D 
Sbjct: 476 NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD 535

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF +M E G  P + TYN+MI+   +  R  + +   G M  QGLLPNV+TYT+ +D
Sbjct: 536 ALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++GR           +  A   F  M+     P+    +SLI+   ++ +  +A  +
Sbjct: 596 GLCKNGR-----------TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
           L    ++G +P+V TYTTL++ L
Sbjct: 645 L----DDGCEPNVDTYTTLVRGL 663



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 163/347 (46%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T+ A+I  L N G+  EAE +   +   G  P T  Y +L+ G+ K G L  A
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLA 256

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M + G  P+  TYS LI+   + GR E A  +L+EM     +P    Y+  +  
Sbjct: 257 FEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVS 316

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             D G      ++L +MK  G  P+   Y  +I    +      A+  + +ML++G+ P 
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T++ LI+  +  GR++ A  +FE M      P T TYN++I         +    +  
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G  PNV+TY  ++ IY + G  ++A+  LE           +M+ +GLK      
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE-----------MMKGNGLKLDTWTY 485

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +LI+ F    +   AF++   M E+G+ P+VVTY  ++   + V K
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 207/465 (44%), Gaps = 27/465 (5%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID-SSLLQKLYKEIE 257
           +I +C    ++++ + ++S++    Y   +  YS     L +  K D   L + +Y E+ 
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTT-YDFGYTLYSFSTL-LIQLGKFDMDGLGRDVYIEML 194

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I  +    N +I      G   +A   +G     G  P T TY ++I     +G   
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A  +F+ + + G  P +  Y+AL+ G    G L++A  ++ EM   G+ P  H Y++ I
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPI 314

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            +  +AGR   A  +L +M+     PN   Y+ +++G    G+++    V  +M + G+ 
Sbjct: 315 VSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLV 374

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    Y+ +I+          A+  F+ MLS    P+T T+N +I      G   +A  +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F++M + G  P   TYNI+I++  +Q    +  RLL  M+  GL  +  TY  L+  + +
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSR 494

Query: 558 SGRFDDAIECL-----EGLS-------------------DQAVNAFRVMRTDGLKPSNLA 593
            G+ + A          G+S                   D A+  F  M   G  PS+  
Sbjct: 495 GGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGT 554

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N +I+ F +  R +EA      M + GL P+V+TYT+ +  L +
Sbjct: 555 YNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCK 599



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 14/364 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+I+IH   +   +  A  L +  +     L   TY  LIS  +R   LE A +L ++
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   + + Y+ +I       K+D +L    +K +E   +   G   N +I GF+K 
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDAL-ALFWKMVESGNVPSSGTY-NMMISGFSKT 565

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              S+A  F G     GL P   TY + I  L  +GRT  A  +F E+K+    P    Y
Sbjct: 566 NRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTY 625

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+ G  + G  +DAE ++ +    G  P+  TY+ L+      GR   A  +++ M+ 
Sbjct: 626 SSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKK 681

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P+  IY  +L G     E +   ++   M ++G +P    Y  +I    K N    
Sbjct: 682 KGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQK 741

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  ML +    D + W  L+D   K G  D + EL   M+ R    CT  +   + 
Sbjct: 742 AQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN---CTLNFQTRVM 798

Query: 519 LLGE 522
           L  E
Sbjct: 799 LARE 802



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 143/328 (43%), Gaps = 11/328 (3%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           V+ E+  SG++P    +NA++K     G +++AE ++  +   G  PD  TY+ LI  + 
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G  + A  +   M      PNS  YS ++ G    G  +    +L+EM   G+EP  H
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y + I +         A+    +M   G  P+  T+  LI    + G+++ A  ++ +M
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G  P   TY+ +IN L  + R+E    +   M +   LPN  TY  ++  +      
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF------ 422

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C  G   +A   F  M   G  P+ +  N +I+ + +      A  +L+ MK NG
Sbjct: 423 -----CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           LK D  TY  L+    R  K    FS +
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLF 505



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 17/245 (6%)

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           R+ GE +R  QVL E+ ++     T + ++ ++   GK++        +  ML+ GI P+
Sbjct: 142 RNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPN 201

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N +I      G+   AE +   +   G  P T TY  +I    +    +    +  
Sbjct: 202 LFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFD 261

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G  PN VTY+ L++     GR ++A++ LE + D+           G++P+  A 
Sbjct: 262 RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK-----------GIEPTVHAY 310

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
              I +  +  R  EA  +L  MK+ G  P+V TYT L+  L R  KF      Y     
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY----- 365

Query: 655 YKMLS 659
           +KML+
Sbjct: 366 HKMLA 370


>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
 gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
          Length = 384

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 192/363 (52%), Gaps = 14/363 (3%)

Query: 295 GLSPKTATYAAVITA-LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           G      TY  +I   L    +   A  + E +KESG KP    YN L+ G V  G L+ 
Sbjct: 12  GCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEA 71

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           AE ++ +M++  V  +  TY+ LI  YANAGR +  R + +EM+     PNS+ Y+ ++ 
Sbjct: 72  AEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQ 131

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY  +G ++   ++  EM   G   D H YN+ I  +GK   L       D M ++G+ P
Sbjct: 132 GYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPP 191

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+NTL+D + K   + +A E+  EM E GY P   TYNIM++   +++   +  +L 
Sbjct: 192 DQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLF 251

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            N++++G++PN+VTY+ ++ +YG+ G + +A +    L D+ + A       G  P  +A
Sbjct: 252 ENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAK----LWDEMIEA-------GCIPCIIA 300

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + LI ++G      EA A  Q M+++G+ PD   YT LM A  +  +  +  +  L+F 
Sbjct: 301 YSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCRE--AELLYFE 358

Query: 654 IYK 656
           + K
Sbjct: 359 MTK 361



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 196/396 (49%), Gaps = 14/396 (3%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQS-LTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           A +L  +M +DG     + Y+++I   L + +K+D +L  +L + ++    + D  L N 
Sbjct: 1   ACSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHAL--RLLEVMKESGKKPDEILYNC 58

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           ++ G   +G    A + L   +   +S    TY  +I   +N+GR  +   +F+E+K+ G
Sbjct: 59  LVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKG 118

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P +  YNAL++GY + G  K+A  +  EM+  G   D HTY++ I  Y   G  E   
Sbjct: 119 ESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDME 178

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L EM+     P+   Y+ +L  Y  +  + +  ++L+EM  +G  P+   YN+M+ + 
Sbjct: 179 RLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSA 238

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A   F+ + S+G+ P+ +T++ ++  + + G Y  A +L++EM E G  PC 
Sbjct: 239 RKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCI 298

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             Y+ +I   G    +++      +MR  G++P+   YT L+D YG++GR  +A E L  
Sbjct: 299 IAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREA-ELL-- 355

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
                   +  M  +G  P  +    L+ AF    R
Sbjct: 356 --------YFEMTKEGFVPDGITYGILVRAFANAGR 383



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 43/409 (10%)

Query: 159 CYSYELLYSILIHA-LGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKA 212
           C +  + Y+++IH  L +  KL  A  L        ++   + YN L++    +  LE A
Sbjct: 13  CEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAA 72

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
             ++  M+QD    + + Y+ +I+      ++     +KL++E++ DK            
Sbjct: 73  EKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDC--RKLFQEMK-DK------------ 117

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
                                 G SP + TY A+I      G   EA  +++E+   G  
Sbjct: 118 ----------------------GESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCA 155

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
                YN  +  Y K G L+D E ++ EM+  GV PD+ TY+ L+D YA    +  A  +
Sbjct: 156 KDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEI 215

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L+EM  +  +PN + Y+ +L+  R         Q+ + +KS GV P+   Y+ M+  +G+
Sbjct: 216 LREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGR 275

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +     A   +D M+  G  P  I ++ LI+ +   G Y  A   F++M++ G  P T  
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Y  +++  G+  R  + + L   M  +G +P+ +TY  LV  +  +GR 
Sbjct: 336 YTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 165/617 (26%), Positives = 284/617 (46%), Gaps = 75/617 (12%)

Query: 78  QKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLC 137
           ++Q    +PLL  L E   S+S S      S L++  +  + S +++ + +  S + +L 
Sbjct: 39  RRQFCSVSPLLRNLPEEE-SDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLF 97

Query: 138 SSNSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT 192
           S +     A     W+      KH++ YSY  L ++LI+  G    +++  LL       
Sbjct: 98  SLDLDPKTALNFSHWISQNPRYKHSV-YSYASLLTLLINN-GYVGVVFKIRLL------- 148

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQD-----GYHCDFINYSLVIQSLTRTNKIDSS 247
                 +I +C    D    L+L  KM +D      Y      Y+ ++ SL R   +D  
Sbjct: 149 ------MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDE- 201

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
            ++++Y E+  DK+  +    N ++ G+ K G+  +A +++      GL P   TY ++I
Sbjct: 202 -MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260

Query: 308 TA-----------------------------------LSNSGRTIEAEAVFEELKESGLK 332
                                                L  + R  EA  +F ++K+    
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  + Y  L+K         +A  +V EME +G+ P+ HTY++LID+  +  ++E AR +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L +M      PN   Y+ ++ GY  RG  +    V++ M+S  + P+T  YN +I  + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            N +H AM   ++ML   + PD +T+N+LID   + G +D A  L   M +RG  P   T
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y  MI+ L + +R E+   L  ++  +G+ PNVV YT L+D Y ++G+ D+A   LE   
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK-- 557

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                    M +    P++L  N+LI+    D +  EA  + + M + GL+P V T T L
Sbjct: 558 ---------MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608

Query: 633 MKALIRVDKFHKVFSSY 649
           +  L++   F   +S +
Sbjct: 609 IHRLLKDGDFDHAYSRF 625



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 212/470 (45%), Gaps = 27/470 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TY +LI    +  DL+ A  + ++M   G   + + Y+ +I  L    +ID ++   L+
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM--DLF 311

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +++ D+     +    +I     +   S+A+  +   +  G+ P   TY  +I +L + 
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  +A  +  ++ E GL P    YNAL+ GY K G ++DA  VV  ME   + P+  TY
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  Y  +     A  VL +M      P+   Y+ ++ G    G +   +++L  M  
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ PD   Y  MID+  K   +  A   FD +  +G+ P+ + +  LID + K G+ D 
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  + E+M  +   P + T+N +I+ L    + ++   L   M   GL P V T T L+ 
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610

Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
              + G FD A                          C EG    A +    MR +G+ P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                +SLI  +G+  +   AF VL+ M++ G +P   T+ +L+K L+ +
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 229/522 (43%), Gaps = 53/522 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SL+   C     +D A+ V + +     C   E+ Y+ LIH L  + ++ EA  L  +
Sbjct: 256 YTSLIMGYCQ-RKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +      T  TY  LI +   ++   +ALNL+ +M + G   +   Y+++I SL    K
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373

Query: 244 IDSSLLQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQ 292
            + +              EL GQ+L           N +I G+ K G    A+  + + +
Sbjct: 374 FEKAR-------------ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              LSP T TY  +I     S    +A  V  ++ E  + P    YN+L+ G  + G   
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  ++S M   G++PD+ TY+ +ID+   + R E A  +   +E     PN  +Y+ ++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            GY   G+      +L++M S    P++  +N +I        L  A    ++M+  G++
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P   T   LI    K G +D A   F++M   G  P   TY   I     + R  D + +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           +  MR  G+ P++ TY++L+  YG  G+           ++ A +  + MR  G +PS  
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQ-----------TNFAFDVLKRMRDTGCEPSQH 708

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
              SLI    E          ++Y K+ G +P++   + +M+
Sbjct: 709 TFLSLIKHLLE----------MKYGKQKGSEPELCAMSNMME 740



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 244/557 (43%), Gaps = 53/557 (9%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDL 209
           K + C+     Y++LI +L  SE+  EA  L +    T +     TY  LI +       
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           EKA  L+ +M + G   + I Y+ +I    +   I+ ++   + + +E  K+  + +  N
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV--DVVELMESRKLSPNTRTYN 432

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++I G+ K+ +  KAM  L       + P   TY ++I     SG    A  +   + + 
Sbjct: 433 ELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P    Y +++    K   +++A  +   +E+ GV P+   Y+ LID Y  AG+ + A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L++M   +  PNS  ++ ++ G    G+ +    + ++M   G++P      ++I  
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K     HA + F +MLS G +PD  T+ T I  + + GR   AE++  +M+E G  P 
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD-----IYG-QSG---- 559
             TY+ +I   G+  +      +L  MR  G  P+  T+ +L+       YG Q G    
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731

Query: 560 --------RFDDAIECLEGLSDQAVNA-----------------FRV--------MRTDG 586
                    FD  +E LE + + +V                    RV         R +G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + PS L  N+L++   + ++  EA  V+  M   G  P + +   L+  L +  K  K  
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK--KGEKER 849

Query: 647 SSYLFFNIYKMLSYSGE 663
            + +F N+ +   Y  E
Sbjct: 850 GTSVFQNLLQCGYYEDE 866



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 181/391 (46%), Gaps = 50/391 (12%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y  ++ +L+  G   E + V+ E+ E  + P    YN ++ GY K+G +++A   VS+
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RD 417
           +  +G+ PD  TY+ LI  Y      +SA  V  EM +   + N   Y+ ++ G    R 
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303

Query: 418 RGEWQ---------------RTFQVL-----------------KEMKSSGVEPDTHFYNV 445
             E                 RT+ VL                 KEM+ +G++P+ H Y V
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID+         A     +ML +G+ P+ IT+N LI+ + K G  + A ++ E M+ R 
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P T TYN +I    +    + +  +L  M  + +LP+VVTY +L+D   +SG FD A 
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             L  ++D+           GL P      S+I++  + +R  EA  +   +++ G+ P+
Sbjct: 483 RLLSLMNDR-----------GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531

Query: 626 VVTYTTLMKALI---RVDKFHKVFSSYLFFN 653
           VV YT L+       +VD+ H +    L  N
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 205/462 (44%), Gaps = 34/462 (7%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LI    R+ + + A  L+S M   G   D   Y+ +I SL ++ +++ +    L+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC--DLF 520

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +E   +  +  +   +I G+ KAG   +A   L         P + T+ A+I  L   
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  + E++ + GL+P       L+   +K G    A     +M  SG  PD HTY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +  I  Y   GR   A  ++ +M  +   P+ F YS ++ GY D G+    F VLK M+ 
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

Query: 434 SGVEPDTHFYNVMID-----TFGKYN------CLHHAMAAFD-------RMLSEGIEPDT 475
           +G EP  H +  +I       +GK        C    M  FD       +M+   + P+ 
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            ++  LI    + G    AE++F+ MQ   G  P    +N +++   + ++  +  +++ 
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M   G LP + +   L+      G +       +G  ++  + F+ +   G     LA 
Sbjct: 821 DMICVGHLPQLESCKVLI-----CGLYK------KGEKERGTSVFQNLLQCGYYEDELAW 869

Query: 595 NSLINAFGEDQRDAEAF-AVLQYMKENGLKPDVVTYTTLMKA 635
             +I+  G+ Q   EAF  +   M++NG K    TY+ L++ 
Sbjct: 870 KIIIDGVGK-QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 207/500 (41%), Gaps = 69/500 (13%)

Query: 116 KLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           +L ES +  P    ++ L+K  C SN  +  A  V++ + +  +     + Y+ LI    
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDV-VTYNSLIDGQC 473

Query: 175 RS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           RS   +  Y    L   + L P   TY ++I +  ++  +E+A +L   + Q G + + +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533

Query: 230 NYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            Y+ +I    +  K+D +  +L+K+  +  C    L     N +I G    G   +A   
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLT---FNALIHGLCADGKLKEATLL 589

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                 +GL P  +T   +I  L   G    A + F+++  SG KP    Y   ++ Y +
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G L DAE ++++M  +GV PD  TYS LI  Y + G+   A  VLK M  +  +P+   
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709

Query: 408 YSRI------------------LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           +  +                  L    +  E+    ++L++M    V P+   Y  +I  
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769

Query: 450 FGKYNCLHHAMAAFDRM-LSEGIEPDTITWNTLIDCHFK--------------------- 487
             +   L  A   FD M  +EGI P  + +N L+ C  K                     
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829

Query: 488 ---------CGRYDRAEE-----LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
                    CG Y + E+     +F+ + + GY+     + I+I+ +G+Q   E    L 
Sbjct: 830 QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889

Query: 534 GNMRAQGLLPNVVTYTTLVD 553
             M   G   +  TY+ L++
Sbjct: 890 NVMEKNGCKFSSQTYSLLIE 909


>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 196/381 (51%), Gaps = 12/381 (3%)

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           +L + +I    + G    A+     AQ  G       Y+A+++A   SGR  EA  VF+ 
Sbjct: 201 KLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQA 260

Query: 326 LKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           +K++G KP    YN ++    K G  LK A  +  EM++ GV PD  T++ LI   +  G
Sbjct: 261 MKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGG 320

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
            WE ++ V  EM+    + + F ++ ++      G+ +    ++  M+   + P+   Y+
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYS 380

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID +GK  C   A++ +  M   G+ PD +++NTLID + K GR+D A    ++M+  
Sbjct: 381 TMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV 440

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G      TYN +I+  G+Q +++D   L   M+ +GL+PNV+TY+ L+D Y ++G   D 
Sbjct: 441 GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQD- 499

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                       N F   +  GLKP  +  +SLI++  +     +A  +LQ M + G++P
Sbjct: 500 ----------VSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQP 549

Query: 625 DVVTYTTLMKALIRVDKFHKV 645
           ++VTY +L+ A  R  +  K+
Sbjct: 550 NIVTYNSLIDAYGRYGQADKL 570



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 202/416 (48%), Gaps = 14/416 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARND-DLEKALNLMSKM 219
           YS ++ A GRS +  EA  + Q  +        +TYN +I AC +   DL++AL++  +M
Sbjct: 238 YSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEM 297

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +++G   D I ++ +I   +R    + S  Q+++ E++   IE D    N +I    K G
Sbjct: 298 QKEGVEPDRITFNSLIAVCSRGGLWEDS--QRVFAEMQRRGIEQDIFTFNTLIDAVCKGG 355

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   +   +G  +SP   TY+ +I      G   EA +++ ++KESG++P   +YN
Sbjct: 356 QMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYN 415

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  Y K+G   DA     +MER G+  D  TY+ LIDAY   G+++ A  +  +M+  
Sbjct: 416 TLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGE 475

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   YS ++  Y   G  Q    V  E K +G++PD   Y+ +ID+  K   +  A
Sbjct: 476 GLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDA 535

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +     M   GI+P+ +T+N+LID + + G+ D+ E +   M          +  ++   
Sbjct: 536 VVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKP 595

Query: 520 LGEQERWEDVKRLLG------NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Q+   D   +L        M+  GL PNVVT++ +++   +     +A   LE
Sbjct: 596 PPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLE 651



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 211/449 (46%), Gaps = 55/449 (12%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S++I +L R  K++ +L   ++   +      +    + ++  + ++G   +A++     
Sbjct: 204 SIMISTLGRLGKVEIAL--DVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAM 261

Query: 292 QGVGLSPKTATYAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           +  G  P   TY  +I A    G  + +A  +F+E+++ G++P    +N+L+    + G 
Sbjct: 262 KKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGL 321

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            +D++ V +EM+R G+  D  T++ LIDA    G+ E A  ++  M   +  PN   YS 
Sbjct: 322 WEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYST 381

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G ++    +  +MK SGV PD   YN +ID + K      A+ A   M   G
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           ++ D +T+N LID + K G+Y  A  LF++M+  G  P   TY+ +I+   +    +DV 
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +    +  GL P+VV Y++L+D             C  GL + AV   + M   G++P+
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSC-----------CKCGLVEDAVVLLQEMTQAGIQPN 550

Query: 591 NLALNSLINAFGE----------------------------------DQRDAE------- 609
            +  NSLI+A+G                                    Q++A        
Sbjct: 551 IVTYNSLIDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLA 610

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A +V   M++ GLKP+VVT++ ++ A  R
Sbjct: 611 AVSVFHEMQQFGLKPNVVTFSAILNACSR 639



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 156/320 (48%), Gaps = 20/320 (6%)

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G ++ A  V +  +++G   + + YS ++ AY  +GR   A  V + M+ +  KPN  
Sbjct: 212 RLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLI 271

Query: 407 IYSRILAGYRDRG-EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            Y+ I+      G + ++   +  EM+  GVEPD   +N +I    +      +   F  
Sbjct: 272 TYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE 331

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M   GIE D  T+NTLID   K G+ + A  +   M+ +   P   TY+ MI+  G+   
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-IECLEGLSDQAVNAFRVMRT 584
           +E+   L  +M+  G+ P+ V+Y TL+DIY + GRFDDA I C +            M  
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKD------------MER 439

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            GLK   +  N+LI+A+G+  +  +A  +   MK  GL P+V+TY+ L      +D + K
Sbjct: 440 VGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSAL------IDSYSK 493

Query: 645 VFSSYLFFNIYKMLSYSGEK 664
                   N++     +G K
Sbjct: 494 AGMHQDVSNVFTEFKRAGLK 513



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 184/408 (45%), Gaps = 38/408 (9%)

Query: 166 YSILIHAL--GRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI A+  G   +L  + + + R + ++P  +TY+ +I    +    E+A++L   M+
Sbjct: 344 FNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D ++Y+ +I    +  + D +L+    K++E   ++ D    N +I  + K G 
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDALIA--CKDMERVGLKADVVTYNALIDAYGKQGK 461

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A       +G GL P   TY+A+I + S +G   +   VF E K +GLKP    Y++
Sbjct: 462 YKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSS 521

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K G ++DA  ++ EM ++G+ P+  TY+ LIDAY   G+ +    V   M    
Sbjct: 522 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANM---- 577

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PNS          +  GE  R+ +V+++   S      H              +  A+
Sbjct: 578 --PNSV---------QKIGE--RSMEVVRKPPPSQQNASDH------------TGVLAAV 612

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F  M   G++P+ +T++ +++   +C     A  L E+M+    +     + +++ L 
Sbjct: 613 SVFHEMQQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRFFDGWVYGIAHGLLMGL- 671

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             ++ W + +RL   +           Y  L D+    G+   A E +
Sbjct: 672 -REQVWVEAQRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEVV 718


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 247/537 (45%), Gaps = 42/537 (7%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFL 184
           SLLK L   +   + A A++ W        +  L   +++ ALGR  +      L +   
Sbjct: 115 SLLKAL-ELSGHWEWALALLRWASDEGAADAAAL--EMVVRALGREGQHDVVCDLLDEMP 171

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L    RL    Y  ++ A +R    E+AL L +++R+ G     + Y++V+    R  + 
Sbjct: 172 LPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRS 231

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
              ++  L +E+    +E D    + VI    + G   +A+ F    +  G  P   TY 
Sbjct: 232 WPRIV-ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYN 290

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A++     +G   EA  V +E+++SG +P    YN L   Y + G+ ++A   +  M   
Sbjct: 291 ALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK 350

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+LP+  TY+ ++ AYAN GR + A  +   M+ +   PN   Y+ I      +  +   
Sbjct: 351 GLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAM 410

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L+EM  SG  P+   +N M+   GK     +     + M S G+E    T+NTLI  
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + +CG    A ++++EM   G+ PC TTYN ++N+L  Q  W   + ++  M   G  PN
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530

Query: 545 VVTYTTLVDIYGQSGRFD--DAIE------------------------C--LEGLSDQAV 576
             +Y+ L+  Y + G     ++IE                        C  LEG+     
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVE---- 586

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            AF+ ++  G KP  +  NS++  + ++   ++A  +   +K++GL PD++TY +LM
Sbjct: 587 KAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 236/514 (45%), Gaps = 54/514 (10%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+  + F   +RQ + P  +TYN ++    R      + + L+ +M
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D    S VI +  R   +D ++    +++++           N ++  F KAG
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAV--AFFEDLKARGHVPCVVTYNALLQVFGKAG 300

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + ++A+R L   +  G  P   TY  +    + +G   EA    + +   GL P T  YN
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++  Y  +G + +A  +   M+++G +P+ +TY+L+        R+ +   +L+EM  S
Sbjct: 361 TVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRS 420

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   ++ +LA    RG      +VL  MKS GVE     YN +I  +G+     +A
Sbjct: 421 GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYA 480

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-- 517
              +D M+S G  P   T+N L++   + G +  A+ +  +M + G+ P   +Y++++  
Sbjct: 481 FKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 540

Query: 518 -----NLLG----EQE------------------------RWEDVKRLLGNMRAQGLLPN 544
                N  G    E+E                        R E V++    ++AQG  P+
Sbjct: 541 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 600

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           +V + +++ +Y ++G +  A E            F  ++  GL P  +  NSL++ + + 
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATE-----------MFDSIKQSGLSPDLITYNSLMDMYAKS 649

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               EA  +L+ +K + +KPDVV+Y T++    +
Sbjct: 650 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 37/419 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN +++A A    +++AL L  +M+++GY  +   Y+L+   L + ++  + L  ++ 
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAML--EML 414

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+       +    N ++    K G      R L   +  G+     TY  +I+A    
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +++E+  SG  P    YNALL    + G    A+ +VS+M ++G  P++ +Y
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534

Query: 374 SLLIDAYANAG-----------------------------------RWESARIVLKEMEV 398
           SLL+  YA  G                                   R E      +E++ 
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  I++ +LA Y   G + +  ++   +K SG+ PD   YN ++D + K N    
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A     ++ S  ++PD +++NT+I+   K G    A+ +  EM   G  PC  TY+ ++ 
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 714

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                E + + + ++  M    L P  +TY  +VD Y ++ R+D+A E L  +SD   N
Sbjct: 715 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQN 773


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 230/498 (46%), Gaps = 32/498 (6%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +   +  AF     + +++ +L   TY ALI    +  DLEKA +L S+M 
Sbjct: 340 YTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMT 399

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+ +I+   +   ++ +   +L  EI+ + +  +  +   ++ G    GD
Sbjct: 400 MMGIKPDIQTYNCLIEGYYKVQNMEKAY--ELLIEIKKENLTANAYMCGAIVNGLCHCGD 457

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A          GL P    Y  ++  L   GR  EA  +   +K+ GL P    YN 
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+ K G +++ +  + EM   G+ P+ +TY   I  Y  AG  ++A     EM  S 
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN  I + ++ GY   G   + F   + M   GV PD   ++V+I    K   L  AM
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  +L +G+ PD  T+ +LI    K G    A EL ++M ++G  P   TYN +IN L
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
            +       + L   +  +GL  N VTY+T++  Y +S    +A +              
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G +++A++ F  M  +G+  S  A N+LI+ F +  +  EA+ +++ 
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVED 816

Query: 617 MKENGLKPDVVTYTTLMK 634
           M +N + P+ VTYT L++
Sbjct: 817 MVDNHITPNHVTYTILIE 834



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 200/426 (46%), Gaps = 43/426 (10%)

Query: 166  YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
            +S+LIH L ++ KL EA      LL +       TY +LIS   +  DL+ A  L   M 
Sbjct: 620  HSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC 679

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            + G + + + Y+ +I  L +  +I  +  ++L+  I    +  +    + +I G+ K+ +
Sbjct: 680  KKGINPNIVTYNALINGLCKLGEIAKA--RELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             ++A +     + VG+ P +  Y A+I     +G T +A ++F  + E G+   T A+NA
Sbjct: 738  LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNA 796

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L+ G+ K+G L +A  +V +M  + + P+  TY++LI+ +   G  + A  +  EM+  +
Sbjct: 797  LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              PN   Y+ +L GY   G     F +                                 
Sbjct: 857  VMPNVLTYTSLLHGYNRIGRRSEMFSL--------------------------------- 883

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              FD M++ GI+PD + W+ ++D H K G + +A +L ++M   G   C   Y I+I+ L
Sbjct: 884  --FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             +     +V ++L  +  QG   ++ T  TLV  + ++GR D+A+  LE +    +N   
Sbjct: 942  CKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNLLE 1001

Query: 581  VMRTDG 586
                +G
Sbjct: 1002 FSVRNG 1007



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 231/537 (43%), Gaps = 57/537 (10%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNA 198
           +L   ++SW  K N+     ++Y+ ++  L   GR E+  +   + + Q L+P    YN 
Sbjct: 463 ELFQEMISWGLKPNI-----VIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +   +E+  + + +M   G   +   Y   I    R  ++ ++  ++ + E+  
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA--ERSFIEMLD 575

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I  +  +  D+I G+ K G+ +KA          G+ P   T++ +I  LS +G+  E
Sbjct: 576 SGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQE 635

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VF EL + GL P    Y +L+    K G LK A  +  +M + G+ P+  TY+ LI+
Sbjct: 636 AMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                G    AR +   +       NS  YS I+AGY         FQ+   MK  GV P
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE-------------------------- 472
           D+  Y  +ID   K      A++ F  M+ EGI                           
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVE 815

Query: 473 --------PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                   P+ +T+  LI+ H   G    AE+LF EMQ+R   P   TY  +++      
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R  ++  L   M A+G+ P+ + ++ +VD + + G +  A++ ++ +  + VN  + + T
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYT 935

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                       LI+A  +    +E   VL  +++ G K  + T  TL+    R  +
Sbjct: 936 -----------ILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 176/383 (45%), Gaps = 14/383 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           VI G  +AGD  +A+         GL P    YA +I       R+ E +++ +E+   G
Sbjct: 273 VIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG 332

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           LKP   AY AL+ G+VK   +  A  V  EM    +  +  TY  LI      G  E A 
Sbjct: 333 LKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAE 392

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +  EM +   KP+   Y+ ++ GY      ++ +++L E+K   +  + +    +++  
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                L  A   F  M+S G++P+ + + T++    K GR++ A ++   M+++G  P  
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             YN +I    +  + E+ K  L  M A+GL PNV TY   +  Y           C  G
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY-----------CRAG 561

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
               A  +F  M   G+ P+++    LI+ + +D    +AFA  + M + G+ PDV T++
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621

Query: 631 TLMKALIRVDKFHK---VFSSYL 650
            L+  L +  K  +   VFS  L
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELL 644



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 26/267 (9%)

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S+L     N+G + +A  VL+ M +    P+  I   I+  Y             KE+
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERM-IDTRNPHVKILDSIIKCY-------------KEI 154

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             S        + ++ID + K   L+ A++ F    +          N+L     K  R 
Sbjct: 155 NGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRV 214

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +   ++++ M      P   TY  +IN      + E+ K +L +M  +G +PN+VTY+ +
Sbjct: 215 ELFWKVYKGML-GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVV 273

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +    ++G  D+A+E             R M   GL P N    +LI+ F   +R  E  
Sbjct: 274 IAGLCRAGDVDEALE-----------LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGK 322

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++L  M   GLKPD V YT L+   ++
Sbjct: 323 SMLDEMYTMGLKPDHVAYTALINGFVK 349


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 247/537 (45%), Gaps = 42/537 (7%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFL 184
           SLLK L   +   + A A++ W        +  L   +++ ALGR  +      L +   
Sbjct: 115 SLLKAL-ELSGHWEWALALLRWASDEGAADAAAL--EMVVRALGREGQHDVVCDLLDEMP 171

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L    RL    Y  ++ A +R    E+AL L +++R+ G     + Y++V+    R  + 
Sbjct: 172 LPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRS 231

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
              ++  L +E+    +E D    + VI    + G   +A+ F    +  G  P   TY 
Sbjct: 232 WPRIV-ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYN 290

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A++     +G   EA  V +E+++SG +P    YN L   Y + G+ ++A   +  M   
Sbjct: 291 ALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK 350

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+LP+  TY+ ++ AYAN GR + A  +   M+ +   PN   Y+ I      +  +   
Sbjct: 351 GLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAM 410

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L+EM  SG  P+   +N M+   GK     +     + M S G+E    T+NTLI  
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + +CG    A ++++EM   G+ PC TTYN ++N+L  Q  W   + ++  M   G  PN
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530

Query: 545 VVTYTTLVDIYGQSGRFD--DAIE------------------------C--LEGLSDQAV 576
             +Y+ L+  Y + G     ++IE                        C  LEG+     
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVE---- 586

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            AF+ ++  G KP  +  NS++  + ++   ++A  +   +K++GL PD++TY +LM
Sbjct: 587 KAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 236/514 (45%), Gaps = 54/514 (10%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+  + F   +RQ + P  +TYN ++    R      + + L+ +M
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D    S VI +  R   +D ++    +++++           N ++  F KAG
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAV--AFFEDLKARGHVPCVVTYNALLQVFGKAG 300

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + ++A+R L   +  G  P   TY  +    + +G   EA    + +   GL P T  YN
Sbjct: 301 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 360

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++  Y  +G + +A  +   M+++G +P+ +TY+L+        R+ +   +L+EM  S
Sbjct: 361 TVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRS 420

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   ++ +LA    RG      +VL  MKS GVE     YN +I  +G+     +A
Sbjct: 421 GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYA 480

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-- 517
              +D M+S G  P   T+N L++   + G +  A+ +  +M + G+ P   +Y++++  
Sbjct: 481 FKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 540

Query: 518 -----NLLG----EQE------------------------RWEDVKRLLGNMRAQGLLPN 544
                N  G    E+E                        R E V++    ++AQG  P+
Sbjct: 541 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 600

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           +V + +++ +Y ++G +  A E            F  ++  GL P  +  NSL++ + + 
Sbjct: 601 LVIFNSMLAMYAKNGLYSKATE-----------MFDSIKQSGLSPDLITYNSLMDMYAKS 649

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               EA  +L+ +K + +KPDVV+Y T++    +
Sbjct: 650 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 37/419 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN +++A A    +++AL L  +M+++GY  +   Y+L+   L + ++  + L  ++ 
Sbjct: 357 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAML--EML 414

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+       +    N ++    K G      R L   +  G+     TY  +I+A    
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +++E+  SG  P    YNALL    + G    A+ +VS+M ++G  P++ +Y
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534

Query: 374 SLLIDAYANAG-----------------------------------RWESARIVLKEMEV 398
           SLL+  YA  G                                   R E      +E++ 
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  I++ +LA Y   G + +  ++   +K SG+ PD   YN ++D + K N    
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A     ++ S  ++PD +++NT+I+   K G    A+ +  EM   G  PC  TY+ ++ 
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 714

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                E + + + ++  M    L P  +TY  +VD Y ++ R+D+A E L  +SD   N
Sbjct: 715 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQN 773


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 230/484 (47%), Gaps = 18/484 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  + +    +      +TYN+LISA AR+  L++A+ L S
Sbjct: 326 KVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKS 385

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    +T K D ++  K+++E+     + +    N +I     
Sbjct: 386 QMVKKGIKPDVFTYTTLLSGFEKTGKDDYAM--KVFEEMRVAGCQPNICTFNALIKMHGN 443

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+  + M+     +     P   T+  ++     +G   E   VF+E+K +G  P    
Sbjct: 444 RGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 503

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G+   A  +   M  +GV PD  TY+ ++ A A  G WE +  VL EM+
Sbjct: 504 FNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMK 563

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   Y  +L  Y +  E +R   + +E+ S  +EP       ++  + K + L 
Sbjct: 564 DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLT 623

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF  +  +G  PD  T N ++  + +     +  E+   +++ G+ P  TTYN ++
Sbjct: 624 ETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLM 683

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +    E +E  + +L  + A+G+ P+++++ T++  Y ++GR             +A  
Sbjct: 684 YMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRM-----------KEASR 732

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M+  GL P  +  N+ I ++  D    EA  V++YM +N  KP+  TY +L+    
Sbjct: 733 IFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFC 792

Query: 638 RVDK 641
           ++++
Sbjct: 793 KLNR 796



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 216/473 (45%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y +LI+A A N    +A+ +  K+ ++G     I Y++++    +   +  S +  L   
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG-MPWSKIAGLVDS 281

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   +  D    N +I    +     +A       +  G SP   TY A++     S R
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V +E++ SG  P    YN+L+  Y + G L +A  + S+M + G+ PD  TY+ 
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+  +   G+ + A  V +EM V+  +PN   ++ ++  + +RG +    +V +E+K   
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+NTLI  + +CG +D+A 
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            ++  M + G  P  +TYN ++  L     WE  +++L  M+     PN +TY +L+  Y
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 556 GQSGRFDD----AIECLEGLSD-QAV-------------------NAFRVMRTDGLKPSN 591
                 +     A E   G+ + QAV                    AF  +R  G  P  
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDI 641

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++++ +G  +  ++   +L ++K++G  P + TY +LM    R + F K
Sbjct: 642 TTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEK 694



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 194/378 (51%), Gaps = 14/378 (3%)

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
           L   ++  +I    K G AS A   L   +  G+      Y ++ITA +++GR  EA  V
Sbjct: 183 LSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMV 242

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMG--YLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           F++L+E G +P    YN +L  Y KMG  + K A  V S M+ SGV PD +TY+ LI + 
Sbjct: 243 FKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS-MKSSGVAPDLYTYNTLISSC 301

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
                +E A  V +EM+ +   P+   Y+ +L  Y      +   +VLKEM++SG  P  
Sbjct: 302 RRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSI 361

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YN +I  + +   L  AM    +M+ +GI+PD  T+ TL+    K G+ D A ++FEE
Sbjct: 362 VTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEE 421

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M+  G  P   T+N +I + G +  + ++ ++   ++    +P++VT+ TL+ ++GQ+  
Sbjct: 422 MRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN-- 479

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                    G+  +    F+ M+  G  P     N+LI+A+       +A A+ + M + 
Sbjct: 480 ---------GMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530

Query: 621 GLKPDVVTYTTLMKALIR 638
           G+ PD+ TY  ++ AL R
Sbjct: 531 GVTPDLSTYNAVLAALAR 548



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 217/476 (45%), Gaps = 48/476 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LIS+C R    E+A  +  +M+  G+  D + Y+ ++    ++ +   ++  ++ K
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM--EVLK 350

Query: 255 EIEC------------------------DKIELDGQLLND-----------VIVGFAKAG 279
           E+E                         + +EL  Q++             ++ GF K G
Sbjct: 351 EMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTG 410

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               AM+     +  G  P   T+ A+I    N G  +E   VFEE+K     P    +N
Sbjct: 411 KDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWN 470

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  + + G   +   V  EM+R+G +P+  T++ LI AY+  G ++ A  + + M  +
Sbjct: 471 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDA 530

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   Y+ +LA     G W+++ +VL EMK    +P+   Y  ++  +     +   
Sbjct: 531 GVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERM 590

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            A  + + S  IEP  +   TL+  + K       E  F E++E+G+ P  TT N M+++
Sbjct: 591 SALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSI 650

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            G +        +L  ++  G  P++ TY +L+ +Y ++  F+ + + L           
Sbjct: 651 YGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL----------- 699

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           R +   G+KP  ++ N++I A+  + R  EA  +   MK+ GL PDV+TY T + +
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIAS 755



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 164/347 (47%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I+ L   GR   A ++  +L+  G+     AY +L+  Y   G  ++A  V  ++E 
Sbjct: 189 AVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEE 248

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W     ++  M+ S   P+ + Y+ +++  R    ++
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYE 308

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              +V +EMK++G  PD   YN ++D +GK      AM     M + G  P  +T+N+LI
Sbjct: 309 EAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLI 368

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  D A EL  +M ++G  P   TY  +++   +  + +   ++   MR  G  
Sbjct: 369 SAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQ 428

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  G F + ++  E +           +     P  +  N+L+  FG
Sbjct: 429 PNICTFNALIKMHGNRGNFVEMMKVFEEI-----------KICECVPDIVTWNTLLAVFG 477

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ A  R   F +  + Y
Sbjct: 478 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIY 524



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/344 (20%), Positives = 150/344 (43%), Gaps = 2/344 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N L++   +N    +   +  +M++ G+  +   ++ +I + +R    D ++   +Y
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM--AIY 524

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + +    +  D    N V+   A+ G   ++ + L   +     P   TY +++ A +N 
Sbjct: 525 RRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANG 584

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
                  A+ EE+    ++P+      L+  Y K   L + E    E+   G  PD  T 
Sbjct: 585 KEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTL 644

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++  Y           +L  ++ S   P+   Y+ ++  Y     ++++  +L+E+ +
Sbjct: 645 NAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIA 704

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   +N +I  + +   +  A   F  M   G+ PD IT+NT I  +     +  
Sbjct: 705 KGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIE 764

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           A ++ + M +    P   TYN +I+   +  R ++    + N+R
Sbjct: 765 AIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLR 808


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 247/513 (48%), Gaps = 21/513 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S + LA AV+  + K  L Y  +++  S L++    S+++ +A  L  +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMK--LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 175

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 +   +T+N LI     ++   +A+ L+ +M Q G   D + Y  V+  L +   
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +L   L K++E  KIE D  + N +I G  K      A       +  G+ P   TY
Sbjct: 236 IDLAL--SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I+ L N GR  +A  +   + E  + P    ++AL+  +VK G L +AE +  EM +
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TYS LI+ +    R + A+ + + M      PN   Y+ ++ G+      + 
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  +T  YN +I    +      A   F +M+S+G+ PD IT++ L+D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+ ++A  +FE +Q+    P   TYNIMI  + +  + ED   L  ++  +G+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV+ YTT++  +           C +GL ++A   FR M+ DG  P +   N+LI A   
Sbjct: 534 NVIIYTTMISGF-----------CRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 582

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           D   A +  +++ M+  G   D  T + ++  L
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 229/502 (45%), Gaps = 31/502 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTY-----NALISACARNDDLEKALNLMSKMR 220
           ++ L+ A+ + +K      L +R +   ++Y     N LI+   R   L  AL ++ KM 
Sbjct: 83  FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  D +  S ++     + +I  ++   L  ++     + D    N +I G      
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAV--ALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           AS+A+  +      G  P   TY AV+  L   G    A ++ +++++  ++     YN 
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K  ++ DA  + ++ME  G+ PD  TY+ LI    N GRW  A  +L  M    
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   +S ++  +   G+     ++  EM    ++PD   Y+ +I+ F  ++ L  A 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ M+S+   P+ +T+NTLI    K  R +   ELF EM +RG    T TYN +I  L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------- 565
            +    +  +++   M + G+ P+++TY+ L+D   + G+ + A+               
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 566 ---------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G  +   + F  +   G+KP+ +   ++I+ F       EA A+ + 
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 617 MKENGLKPDVVTYTTLMKALIR 638
           MKE+G  PD   Y TL++A +R
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLR 582



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 213/464 (45%), Gaps = 18/464 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L+ NAL+     N  L+ A+ L  +M Q       + ++ ++ ++ +  K D  L+  L 
Sbjct: 51  LSRNALL-----NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFD--LVISLG 103

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++  +I  D    N +I  F +      A+  LG    +G  P   T ++++    +S
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHS 163

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  +A A+ +++ E G KP T  +N L+ G        +A  +V +M + G  PD  TY
Sbjct: 164 KRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 223

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             +++     G  + A  +LK+ME    + +  IY+ I+ G          F +  +M++
Sbjct: 224 GAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET 283

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ PD   YN +I     Y     A      M+   I P+ +T++ LID   K G+   
Sbjct: 284 KGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVE 343

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           AE+L++EM +R   P   TY+ +IN     +R ++ K +   M ++   PNVVTY TL+ 
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + ++ R ++ +E            FR M   GL  + +  N+LI    +      A  +
Sbjct: 404 GFCKAKRVEEGME-----------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
            + M  +G+ PD++TY+ L+  L +  K  K    + +    KM
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 217/455 (47%), Gaps = 17/455 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +T+N L++      ++  A ++ +K+ + GYH   I ++ +I  +    K+  +L   
Sbjct: 93  TIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEAL--H 150

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            +  +      LD      +I G  K G+   A++ L   +G  ++     Y  +I +L 
Sbjct: 151 FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLC 210

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                 +A  ++ E+    + P    +N+L+ G+  +G LK+A  +  EM    + PD +
Sbjct: 211 KDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY 270

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S+L+DA    G    A+ +L  M      P+   YS ++ GY    E  +   V   M
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTM 330

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              GV P  H YN+MI+  GK   +  A++ F  M  +GI PDT+T+N+LID   K GR 
Sbjct: 331 SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI 390

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A +L +EM   G      TYN +I++L +    +    L+  ++ QG+ P++ TY  L
Sbjct: 391 SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNIL 450

Query: 552 VDIYGQSGRFDDAIECLEGL--SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +D   + GR  +A +  + L     +VNA+               N +IN   ++    E
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAW-------------TYNIMINGLCKEGLFNE 497

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           A  +L  M+ NG+ PD VTY T+++AL R D+  K
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + ++ ++ S+ + N    +    L  ++E   I       N ++  +   G+ + A   
Sbjct: 57  IVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSI 116

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                 +G  P T T+  +I  +  +G+  EA    + +   G      +Y  L+ G  K
Sbjct: 117 FAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCK 176

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  + A  ++ ++E   V  D   Y+++I++         A  +  EM      P+   
Sbjct: 177 IGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT 236

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           ++ ++ G+   G+ +  F +  EM    + PD + +++++D   K   +  A      M+
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G+ PD +T+++L+D +      ++A+ +F  M   G  P   +YNIMIN LG+ +  +
Sbjct: 297 KQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVD 356

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   L   M  +G+ P+ VTY +L+D   + GR   A +    L D+       M  +G+
Sbjct: 357 EALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ----LVDE-------MHNNGI 405

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               L  NSLI+   ++    +A A+++ +K+ G++P + TY  L+  L +
Sbjct: 406 PADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCK 456



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 123/544 (22%), Positives = 234/544 (43%), Gaps = 99/544 (18%)

Query: 57  FTSKQNDTEEEEEDDDDVLSLQKQR--------YDFTPLLNFLSENSNSESASALASSPS 108
           F  K ND +     ++DV S  +           +F  +L  + + +N+   +A++ S  
Sbjct: 29  FIPKSNDFDV----NNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLS-- 82

Query: 109 SLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSI 168
             +++E K        P  +  ++L N       +  A+++ + + K    +   + ++ 
Sbjct: 83  --HQLELK-----GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGY-HPTTITFNT 134

Query: 169 LIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LI+ +  + KL EA      +++    L  ++Y  LI+   +  +   AL ++ K+    
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA------- 276
            + D + Y+++I SL +   +  +   +LY E+   +I  D    N +I+GF        
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDA--YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252

Query: 277 ----------------------------KAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                                       K G+ ++A   L +    G+ P   TY++++ 
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                    +A+ VF  +   G+ P   +YN ++ G  K+  + +A  +  EM   G+ P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ LID     GR            +S+A                   W    Q++
Sbjct: 373 DTVTYNSLIDGLCKLGR------------ISYA-------------------W----QLV 397

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM ++G+  D   YN +ID   K + +  A+A   ++  +GI+P   T+N LID   K 
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR   A+++F+++  +GY     TYNIMIN L ++  + + + LL  M   G++P+ VTY
Sbjct: 458 GRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTY 517

Query: 549 TTLV 552
            T++
Sbjct: 518 ETII 521



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 170/353 (48%), Gaps = 11/353 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+I+I++L + + + +A+ L      +R++P  +T+N+LI        L++A  L  +
Sbjct: 200 VMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHE 259

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           M     + D   +S+++ +L +   I    ++L  + K+     +     L++    G+ 
Sbjct: 260 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD----GYC 315

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              + +KA         +G++P   +Y  +I  L       EA ++F+E+   G+ P T 
Sbjct: 316 LVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTV 375

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN+L+ G  K+G +  A  +V EM  +G+  D  TY+ LID        + A  ++K++
Sbjct: 376 TYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKI 435

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +    +P+ + Y+ ++ G    G  +    V +++   G   +   YN+MI+   K    
Sbjct: 436 KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLF 495

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + A     +M + GI PD +T+ T+I   F+    ++AE+L  EM  RG   C
Sbjct: 496 NEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLLC 548



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 13/214 (6%)

Query: 438 PDTHFYNVMIDTFGKYNCLHH--AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           P    +N ++ +  K N  H+  A++   ++  +GI P  +T+N L++C+   G    A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +F ++ + GY P T T+N +IN +    + ++      ++ A G   + V+Y TL++  
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + G    A++ L+ +  + VN   VM            N +IN+  +D+  ++A+ +  
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMY-----------NIIINSLCKDKAVSDAYQLYS 223

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M    + PDVVT+ +L+     V +  + F  +
Sbjct: 224 EMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 225/500 (45%), Gaps = 55/500 (11%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLTRTNKID--SSL 248
           +  TY  LI    R   L+        + + G+   D + +S +++ L    ++D  + +
Sbjct: 91  SSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---LSPKTATYAA 305
           L +   E  C        +L   + GF     A +A+  L M    G    +P   TY  
Sbjct: 151 LLRRMPEFGCTPDVFSYSIL---LKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTT 207

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           VI  L  +     A+ VF+ + + G++P    Y  L+ GY+ +G  K+   ++ EM   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD + Y++L+D     GR   AR +   +     KPN  IY  +L GY   G      
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
             L  M  +GV PD H +N+M   + K   +  AM  FD+M  + + P+ +T+  LID  
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 486 FKCGRYD-----------------------------------RAEELFEEMQERGYFPCT 510
            K GR D                                   +AEELF E+ ++G    T
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             +N ++  L  + R  + +RL+  M   G+ P+V++Y TLVD +  +GR D+A + L+ 
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLD- 506

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
                     V+ + GLKP  +  N+L++ + + +R  +A+++ + M   GL PDVVTY 
Sbjct: 507 ----------VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYN 556

Query: 631 TLMKALIRVDKFHKVFSSYL 650
           T++  L +  +F +    YL
Sbjct: 557 TILHGLFQTGRFSEAKELYL 576



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/641 (22%), Positives = 256/641 (39%), Gaps = 97/641 (15%)

Query: 90  FLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAV 149
            L+  S +  +SA     S  NR+  +   S +  P+   +++L         +   +A 
Sbjct: 57  LLTAVSRARCSSASELVVSLFNRMIREC--SIKVAPSSFTYTILIGCFCRMGRLKHGFAA 114

Query: 150 VSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR----LTP--LTYNALISAC 203
              + K     +  +++S L+  L  ++++ EA  +  R+      TP   +Y+ L+   
Sbjct: 115 FGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGF 174

Query: 204 ARNDDLEKALNLMSKMRQDG---YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
                 E+AL L+S M  DG   +  + + Y+ VI  L +   +D +  + +++ +    
Sbjct: 175 CNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA--KGVFQHMIDKG 232

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           +  +      +I G+   G   + ++ L      GL P    YA ++  L  +GR  EA 
Sbjct: 233 VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEAR 292

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH--------- 371
            +F+ +   G+KP    Y  LL GY   G L +    +  M  +GV PD H         
Sbjct: 293 NIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAY 352

Query: 372 --------------------------TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
                                     TY  LIDA    GR + A +   +M      P+ 
Sbjct: 353 AKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDI 412

Query: 406 FIYSRILAGYRDRGEWQRT----FQVLKE------------------------------- 430
           F++S ++ G     +W++     F+VL +                               
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL 472

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   GV PD   YN ++D       +  A    D ++S G++PD +T+NTL+  + K  R
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARR 532

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A  LF EM  +G  P   TYN +++ L +  R+ + K L  +M       N+ TY  
Sbjct: 533 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 592

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           +++             C     D+A   F  + +  L+      N +I A  +  R  +A
Sbjct: 593 IINGL-----------CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
             +   +   GL PDV TY  + + LI+   +++  ++FS+
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSA 682



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 7/399 (1%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +++I+  A  +   + EA   F   ++QRL+P  +TY ALI A  +   ++ A+   ++M
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             +G   D   +S ++  L   +K + +  ++L+ E+    I LD    N ++    + G
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKA--EELFFEVLDQGIRLDTVFFNTLMCNLCREG 461

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A R + +   VG+ P   +Y  ++     +GR  EA  + + +   GLKP    YN
Sbjct: 462 RVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYN 521

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL GY K   + DA  +  EM   G+ PD  TY+ ++      GR+  A+ +   M  S
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             + N + Y+ I+ G          F++   + S  ++ D    N+MI    K      A
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDA 641

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           M  F  + + G+ PD  T+  + +   K G  +  +ELF  M+E G  P +   N ++  
Sbjct: 642 MDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRW 701

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           L  +         L  +  +       T + L+ IY + 
Sbjct: 702 LLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRG 740



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/439 (22%), Positives = 188/439 (42%), Gaps = 53/439 (12%)

Query: 165 LYSILIHALGRSEKLYE--AFL-LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y IL+H       L E  +FL L     ++P    +N +  A A+   +++A+++  KM
Sbjct: 309 IYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKM 368

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ     + + Y  +I +L +  ++D                        D ++ F +  
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVD------------------------DAVLKFNQMI 404

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D              G++P    +++++  L    +  +AE +F E+ + G++  T  +N
Sbjct: 405 DE-------------GMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+    + G + +A+ ++  M R GV PD  +Y+ L+D +   GR + A  +L  +   
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   Y+ +L GY         + + +EM   G+ PD   YN ++    +      A
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +  M++   + +  T+N +I+   K    D A ++F  +  +       T NIMI  
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +  R ED   L   + A GL+P+V TY  + +   + G  ++  E            F
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE-----------LF 680

Query: 580 RVMRTDGLKPSNLALNSLI 598
             M  +G  P++  LN+L+
Sbjct: 681 SAMEENGTAPNSRMLNALV 699



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 147/350 (42%), Gaps = 11/350 (3%)

Query: 164 LLYSILIHAL---GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
            ++S L++ L    + EK  E F  +L Q  RL  + +N L+    R   + +A  L+  
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL 472

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   D I+Y+ ++     T +ID +   KL   I    ++ D    N ++ G+ KA
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEA--AKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A          GL+P   TY  ++  L  +GR  EA+ ++  +  S  +     Y
Sbjct: 531 RRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTY 590

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G  K  ++ +A  +   +    +  D  T +++I A    GR E A  +   +  
Sbjct: 591 NIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISA 650

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y  I       G  +   ++   M+ +G  P++   N ++        ++ 
Sbjct: 651 YGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINR 710

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           A A   ++  +    +  T + LI  + + G Y   ++L + + E+ +FP
Sbjct: 711 AGAYLSKLDEKNFSLEASTTSMLISIYSR-GEY---QQLAKSLPEKYHFP 756


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 205/411 (49%), Gaps = 11/411 (2%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YSL I       + D  + +KL  E+    ++ +    N  I G+ K  D       L +
Sbjct: 230 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 289

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  G++    TY  +I   SN G+  EA+ +FEE++E G++     Y +++    + G 
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +K A  +  EM   G++P  HTY  LI     AG+ E+A++++ EM+      N  I++ 
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY + G      ++   M+  G+E D   YN +     K N    A      M+  G
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P+T+++ TLID + K G +  A+ +F EM+E+G  P   TYN++I+   ++   ++  
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +L   +  +GL+P+V T T+L  I+G         EC++G  D A+  F  M   GL P+
Sbjct: 530 KLKDELENRGLIPDVYTCTSL--IHG---------ECIDGKVDMALKLFDEMPQRGLVPN 578

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +   ++I+   +D R  EAF +   MKE GL PD   Y++L+ +L   D+
Sbjct: 579 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADE 629



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 202/463 (43%), Gaps = 13/463 (2%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
            R +     ++ L    A N    +AL     M + G+H D  +  + + +L R  ++DS
Sbjct: 153 NRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDS 212

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            L  + ++ +    +E+    L  V+ G  K GD     + +      G+     TY A 
Sbjct: 213 CL--RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAF 270

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I              +   +++ G+      Y  L+ G+  +G +++A+ +  EM   G+
Sbjct: 271 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 330

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             D + Y+ +I     +G  + A ++  EM      P++  Y  ++ G    G+ +    
Sbjct: 331 EADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 390

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           ++ EM+  G++ +   +N +ID + +   +  A+     M  +G+E D   +N++     
Sbjct: 391 LVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLC 450

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K  R D A+ L   M ERG  P T ++  +I++  ++  + + KR+   M  +G +PN++
Sbjct: 451 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNII 510

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L+D Y + G   +A      L D+  N        GL P      SLI+    D +
Sbjct: 511 TYNVLIDGYSKRGNMKEA----HKLKDELENR-------GLIPDVYTCTSLIHGECIDGK 559

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              A  +   M + GL P+VVTYT ++  L +  +  + F  Y
Sbjct: 560 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY 602



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 40/279 (14%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  LIH + ++ ++  A +L    +     L P+ +N LI     +  +++AL L   M 
Sbjct: 372 YGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVME 431

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKE---I 256
           + G   D   Y+ +   L + N+ D                     ++L+    KE   +
Sbjct: 432 KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFV 491

Query: 257 ECDKI----ELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           E  ++    E  G + N +     I G++K G+  +A +     +  GL P   T  ++I
Sbjct: 492 EAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 551

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                 G+   A  +F+E+ + GL P    Y A++ G  K G  ++A  +  EM+ +G+ 
Sbjct: 552 HGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLT 611

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           PD+  YS L+ +  +A   ES  + ++  +V   K + F
Sbjct: 612 PDDTVYSSLVGSLHSAD--ESISMQIQGSQVKANKVDQF 648


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 231/486 (47%), Gaps = 20/486 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + SL+   C  N  +D AY V   + +   C   E+ Y+ LIH L  + ++ EA  L   
Sbjct: 232 YTSLILGHCR-NKGVDNAYEVFLIMPQKG-CQRNEVSYTNLIHGLCEAGRINEALKLFAD 289

Query: 186 SQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                  P   TY  LI A + +    +ALNL ++M++ G   +   Y+++I  L + NK
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  +K+  E+    +       N +I G+ K G    A   L + +     P T TY
Sbjct: 350 MDEA--RKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L    +  +A A+  ++ E  L P    YN+L+ G  K+  L+ A  ++S M  
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G++PD+ TYS+ ID     GR E A  +   ++    K N  IY+ ++ GY   G+   
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +L+ M +    P+++ YNV+I+   K   +  A +   +ML+ G++P  +T+  LI 
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G +D A ++F  M   GY P   TY   ++    Q   E+V  ++  M  +G+LP
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTYT L+D Y +            GL+ +A +  + M   G KPS   ++ LI     
Sbjct: 648 DLVTYTVLIDGYARL-----------GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 604 DQRDAE 609
           + R  E
Sbjct: 697 ENRMKE 702



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 222/488 (45%), Gaps = 50/488 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLY 253
           T+NA+++   +  ++ +A    SK+ Q G H D   Y+ +I    R   +D++  +  + 
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +  C + E+      ++I G  +AG  ++A++           P   TY  +I ALS S
Sbjct: 256 PQKGCQRNEVS---YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR +EA  +F E+KE G +P    Y  L+ G  K   + +A  ++SEM   G++P   TY
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR--------------- 418
           + LID Y   G  + A  +L  ME +   PN+  Y+ ++ G   +               
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 419 --------------------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                                + +  +++L  M  +G+ PD   Y+V IDT  K   +  
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD + ++G++ + + +  LID + K G+ D A  L E M      P + TYN++I 
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L ++++ ++   L+  M   G+ P VVTYT L+    + G FD A++            
Sbjct: 553 GLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK-----------V 601

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M + G +P      + ++A+       E   V+  M E G+ PD+VTYT L+    R
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661

Query: 639 VDKFHKVF 646
           +   H+ F
Sbjct: 662 LGLTHRAF 669



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 267/600 (44%), Gaps = 78/600 (13%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ- 154
           +SE     A   S L+R  ++   S R +   L  S + +L + N     A +  +W+  
Sbjct: 34  DSEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIAL 93

Query: 155 ----KHNLCYSYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDD 208
               KHN+ +SY  + +ILI A  LG +EK+          R++      +I +C   +D
Sbjct: 94  RPGFKHNV-HSYSSMLNILIRARLLGVAEKI----------RIS------MIKSCCSIED 136

Query: 209 LEKALNLMSKMRQDG---YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
           +   L +  KM  DG   +      Y+ ++ SL++   ID   ++ +Y E+  ++I  + 
Sbjct: 137 VLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE--MKTVYLELLNNQISPNI 194

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT----------------- 308
              N ++ G+ K G+  +A  +       GL P T TY ++I                  
Sbjct: 195 YTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254

Query: 309 ------------------ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                              L  +GR  EA  +F ++ E    P  + Y  L+      G 
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
             +A  + +EM+  G  P+ HTY++LID      + + AR +L EM      P+   Y+ 
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G     F++L  M+S+   P+T  YN +I    K   +H AMA  ++ML   
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P  IT+N+LI    K    + A  L   M E G  P   TY++ I+ L ++ R E+  
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L  +++A+G+  N V YT L+D Y + G+ D A   LE            M  D   P+
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER-----------MLNDACLPN 543

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH---KVFS 647
           +   N LI    ++++  EA +++  M   G+KP VVTYT L+  +++   F    KVF+
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 215/509 (42%), Gaps = 55/509 (10%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI  L +  K+ EA  +LS+   + L P  +TYNALI    +   ++ A  ++  M 
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLL--NDVIVGFA 276
            +    +   Y+ +I  L +  K+  +  LL K+ +       +L   L+  N +I G  
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER------KLSPSLITYNSLIHGQC 450

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K  D   A R L +    GL P   TY+  I  L   GR  EA  +F+ +K  G+K    
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y AL+ GY K+G +  A  ++  M     LP+ +TY++LI+      + + A  ++ +M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                KP    Y+ ++      G +    +V   M S G +PD   Y   +  +     L
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
                   +M  EGI PD +T+  LID + + G   RA +  + M + G  P     +I+
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690

Query: 517 INLLGEQERWEDVK-----------------------------RLLGNMRAQGLLPNVVT 547
           I  L  + R ++ +                             +L   M   G   +V  
Sbjct: 691 IKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSI 750

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+  + Q  R ++A    +GL          M+  G+ PS    NSL++   +    
Sbjct: 751 YGALIAGFCQQERLEEA----QGLVHH-------MKERGMSPSEDIYNSLLDCCCKLGVY 799

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           AEA  ++  M ENGL P + +Y  L+  L
Sbjct: 800 AEAVRLVDAMVENGLLPLLESYKLLVCGL 828



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 213/519 (41%), Gaps = 73/519 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L+   C     ID A+ ++  L + N C      Y+ LI  L +  K+++A  L  +
Sbjct: 372 YNALIDGYCKE-GMIDDAFEILD-LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              ++L+P  +TYN+LI    + +DLE A  L+S M ++G   D   YS+ I +L +  +
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 244 IDSSLLQKLYKEIECDKIE---------LDG---------------QLLND--------- 270
           ++ +    L+  ++   ++         +DG               ++LND         
Sbjct: 490 VEEA--GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTY 547

Query: 271 --VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G  K     +A   +     +G+ P   TY  +I  +   G    A  VF  +  
Sbjct: 548 NVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS 607

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P    Y A L  Y   G L++ + V+++M   G+LPD  TY++LID YA  G    
Sbjct: 608 LGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRG----------------------------- 419
           A   LK M  +  KP+ +I S ++                                    
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL 727

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           E++   ++ ++M   G   D   Y  +I  F +   L  A      M   G+ P    +N
Sbjct: 728 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 787

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +L+DC  K G Y  A  L + M E G  P   +Y +++  L  +   E  K +   + + 
Sbjct: 788 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 847

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           G   + V +  L+D   +    D+  E ++ + ++   A
Sbjct: 848 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATA 886


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 241/524 (45%), Gaps = 41/524 (7%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFLLSQRQRLTPLTYN 197
           + A A++ W        +  L   +++ ALGR  +      L +   L    RL    Y 
Sbjct: 36  EWALALLRWASDEGAADAAAL--EMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYT 93

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            ++ A +R    E+AL L +++R+ G     + Y++V+    R  +    ++  L +E+ 
Sbjct: 94  TVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVA-LLEEMR 152

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +E D    + VI    + G   +A+ F    +  G  P   TY A++     +G   
Sbjct: 153 AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYT 212

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  V +E+++SG +P    YN L   Y + G+ ++A   +  M   G+LP+  TY+ ++
Sbjct: 213 EALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVM 272

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            AYAN GR + A  +   M+ +   PN   Y+ I      +  +    ++L+EM  SG  
Sbjct: 273 TAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCT 332

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   +N M+   GK     +     + M S G+E    T+NTLI  + +CG    A ++
Sbjct: 333 PNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKM 392

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++EM   G+ PC TTYN ++N+L  Q  W   + ++  M   G  PN  +Y+ L+  Y +
Sbjct: 393 YDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAK 452

Query: 558 SGRFD--DAIE------------------------C--LEGLSDQAVNAFRVMRTDGLKP 589
            G     ++IE                        C  LEG+      AF+ ++  G KP
Sbjct: 453 GGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVE----KAFQEVKAQGYKP 508

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             +  NS++  + ++   ++A  +   +K++GL PD++TY +LM
Sbjct: 509 DLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 552



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 236/514 (45%), Gaps = 54/514 (10%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+  + F   +RQ + P  +TYN ++    R      + + L+ +M
Sbjct: 92  YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D    S VI +  R   +D ++    +++++           N ++  F KAG
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAV--AFFEDLKARGHVPCVVTYNALLQVFGKAG 209

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + ++A+R L   +  G  P   TY  +    + +G   EA    + +   GL P T  YN
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 269

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++  Y  +G + +A  +   M+++G +P+ +TY+L+        R+ +   +L+EM  S
Sbjct: 270 TVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRS 329

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   ++ +LA    RG      +VL  MKS GVE     YN +I  +G+     +A
Sbjct: 330 GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYA 389

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-- 517
              +D M+S G  P   T+N L++   + G +  A+ +  +M + G+ P   +Y++++  
Sbjct: 390 FKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQC 449

Query: 518 -----NLLG----EQE------------------------RWEDVKRLLGNMRAQGLLPN 544
                N  G    E+E                        R E V++    ++AQG  P+
Sbjct: 450 YAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD 509

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           +V + +++ +Y ++G +  A E            F  ++  GL P  +  NSL++ + + 
Sbjct: 510 LVIFNSMLAMYAKNGLYSKATE-----------MFDSIKQSGLSPDLITYNSLMDMYAKS 558

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               EA  +L+ +K + +KPDVV+Y T++    +
Sbjct: 559 NESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 592



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 37/419 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN +++A A    +++AL L  +M+++GY  +   Y+L+   L + ++  + L  ++ 
Sbjct: 266 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAML--EML 323

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+       +    N ++    K G      R L   +  G+     TY  +I+A    
Sbjct: 324 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 383

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +++E+  SG  P    YNALL    + G    A+ +VS+M ++G  P++ +Y
Sbjct: 384 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 443

Query: 374 SLLIDAYANAG-----------------------------------RWESARIVLKEMEV 398
           SLL+  YA  G                                   R E      +E++ 
Sbjct: 444 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 503

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  I++ +LA Y   G + +  ++   +K SG+ PD   YN ++D + K N    
Sbjct: 504 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 563

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A     ++ S  ++PD +++NT+I+   K G    A+ +  EM   G  PC  TY+ ++ 
Sbjct: 564 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVG 623

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                E + + + ++  M    L P  +TY  +VD Y ++ R+D+A E L  +SD   N
Sbjct: 624 GYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQN 682


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 250/540 (46%), Gaps = 40/540 (7%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSY--ELLYSILIHALGRSEKLYEAFLL-----SQRQRLT 192
           N+  DLA ++  +++  N   S     + ++++  LG++ ++  A  L     +    + 
Sbjct: 119 NNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVD 178

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
              Y +LI+A A N     AL +  KM++ G     I Y+ ++    +     + ++  L
Sbjct: 179 VYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIA-L 237

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            ++++C  +  D    N +I          +A+      +  G  P   TY A++     
Sbjct: 238 VQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGK 297

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           S R  EA  V ++++ +  +P    YN+L+  YV+ G L+DA  +  +M   G+ PD +T
Sbjct: 298 SRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYT 357

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+  + NAG+ E A  V +EM     KPN   ++ ++  Y DRG+++   +V KE+K
Sbjct: 358 YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
                PD   +N ++  FG+          F+ M      P+  T+NTLI  + +CG +D
Sbjct: 418 VCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFD 477

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A   ++ M E G  P  +TYN ++  L     WE  +++L  M+  G  PN VTY++L+
Sbjct: 478 QAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537

Query: 553 DIYGQSGRFDDAIECLEGLSDQA-----------------VN-----------AFRVMRT 584
             Y  +GR    +E +  L+++                  VN           AF   R 
Sbjct: 538 HAYA-NGR---EVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRK 593

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G+ P     N++++ +G  +   +A  +L +M E+GL   + +Y +LM    R + FHK
Sbjct: 594 RGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHK 653



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 229/545 (42%), Gaps = 63/545 (11%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL--------LYSILIHALGRSEKLYE 181
           H L  +LC+ N+ I    A   + +  +L    ++         Y+ L+   G+S +  E
Sbjct: 244 HGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKE 303

Query: 182 AF-LLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A  +L Q +    R + +TYN+L+SA  R   LE AL L  KM   G   D   Y+ ++ 
Sbjct: 304 AMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLS 363

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
                 K    L  ++++E+     + +    N +I  +   G   + ++     +    
Sbjct: 364 GFVNAGK--EELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKC 421

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP   T+  ++     +G   E   VFEE+K S   P    +N L+  Y + G    A  
Sbjct: 422 SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMA 481

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
               M  +GV PD  TY+ ++   A  G WE +  VL EM+    KPN   YS +L  Y 
Sbjct: 482 AYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA 541

Query: 417 DRGEWQR-----------------------------------TFQVLKEMKSSGVEPDTH 441
           +  E +R                                   T +   E +  G+ PD  
Sbjct: 542 NGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVT 601

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N M+  +G+   +  A    + M   G+     ++N+L+  + +   + ++E++F E+
Sbjct: 602 TSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREI 661

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ++G  P   +YNI+I      +  ++ KR++  M+    +P+VVTY T +  Y     F
Sbjct: 662 LDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMF 721

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            +AI+ +           R M   G KP++   NS+++ + + +   EA + +Q + +  
Sbjct: 722 VEAIDVI-----------RYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNLGD-- 768

Query: 622 LKPDV 626
           L P +
Sbjct: 769 LDPQI 773



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 207/468 (44%), Gaps = 26/468 (5%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   +TYNAL+    ++   ++A+ ++ +M  + +    + Y+ ++ +  R   ++ +L+
Sbjct: 282 RPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALV 341

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K  +++    I+ D      ++ GF  AG    AM      + VG  P   T+ A+I  
Sbjct: 342 LK--RKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKM 399

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
             + G+  E   VF+E+K     P    +N LL  + + G   +   V  EM+RS   P+
Sbjct: 400 YGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPE 459

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ LI AY   G ++ A    K M  +   P+   Y+ +LA     G W+++ +VL 
Sbjct: 460 RDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLA 519

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EMK  G +P+   Y+ ++  +     +    A  + + S  I+   +   TL+  + K  
Sbjct: 520 EMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVD 579

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
                E  F E ++RG  P  TT N M+++ G ++       +L  M   GL  ++ +Y 
Sbjct: 580 LLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYN 639

Query: 550 TLVDIYGQSGRF-----------DDAIE-------------CLEGLSDQAVNAFRVMRTD 585
           +L+ +Y ++  F           D  IE             C   + D+A      M+  
Sbjct: 640 SLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVP 699

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              P  +  N+ I A+  D    EA  V++YM + G KP+  TY +++
Sbjct: 700 APVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIV 747



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 50/419 (11%)

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIEL-DGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           +I+ L   NK D +L    +     D++ L +G ++  ++    K G  S+A   L   +
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             G       Y ++ITA +N+ +  +A  VF ++KE G +P    YNA+L  Y KMG + 
Sbjct: 172 ADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMG-MP 230

Query: 353 DAEFV--VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            A+ +  V +M+  G+ PD  TY+ LI        +E A  + +E++V+  +P++  Y+ 
Sbjct: 231 WAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNA 290

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +L  Y      +   +VLK+M+S+   P    YN ++  + +   L  A+    +M+ +G
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I+PD  T+ TL+      G+ + A E+FEEM                             
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEM----------------------------- 381

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
                 R  G  PN+ T+  L+ +YG  G+F+           + V  F+ ++     P 
Sbjct: 382 ------RKVGCKPNICTFNALIKMYGDRGKFE-----------EMVKVFKEIKVCKCSPD 424

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  N+L+  FG++  D+E   V + MK +   P+  T+ TL+ A  R   F +  ++Y
Sbjct: 425 IVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAY 483


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 232/486 (47%), Gaps = 22/486 (4%)

Query: 164 LLYSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ LI+ L +  K+ EA  +LSQ  +  L+P   TY +LI    RN +L+ A  +  +
Sbjct: 199 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M ++G   + + YS +I  L    ++D +L   + +E+    IE         I      
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEAL--DMLEEMIEKGIEPTVYTYTLPITALCAI 316

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+  +   +  G  P   TY A+I+ LS  G+   A  ++ ++ + GL P T  Y
Sbjct: 317 EHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTY 376

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G    A  +   ME  G L +  TY+ +I      G  E A ++ ++M  
Sbjct: 377 NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLK 436

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P    Y+ ++ GY  +G      ++L  MK +G EPD   YN ++  F K+  L  
Sbjct: 437 MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLES 496

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M+  G+ P+ +++  LID H K G+ D A  L + M+E G  P   +YN +IN
Sbjct: 497 ASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVIN 556

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L ++ R+ + +++   M  QGLLPNV+TYTTL+D   ++GR           +  A   
Sbjct: 557 GLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR-----------TQFAFKI 605

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M      P+    +SLI    ++ +  EA    + M E G +P + TY+TL+  L R
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCR 661

Query: 639 VDKFHK 644
             +F++
Sbjct: 662 KGRFYE 667



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 267/597 (44%), Gaps = 57/597 (9%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAP---LWHSL 132
            +Q     F  L+N LS+      A             E  L++ ++   +P    + SL
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREA-------------ELILSQIFQYDLSPDVFTYTSL 239

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQ 187
           +   C  N ++DLA+ V   + K   C    + YS LI+ L    ++ EA      ++ +
Sbjct: 240 ILGHCR-NRNLDLAFGVFDRMVKEG-CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
               T  TY   I+A    +  E+A+ L+++M++ G   +   Y+ +I  L+R  K++ +
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357

Query: 248 --LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             L  K+ KE           L+N++ VG    G  S A++     +G G    T TY  
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVG----GRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L   G   +A  +FE++ + G  P    YN L+ GY+  G + +A  ++  M+ +G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PDE TY+ L+  ++  G+ ESA    +EM      PN   Y+ ++ G+   G+     
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +LK M+  G  P+   YN +I+   K N    A    D+M+ +G+ P+ IT+ TLID  
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGL 593

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + GR   A ++F +M++R   P   TY+ +I  L ++ + ++ +R    M   G  P +
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTL 649

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLS------------------------DQAVNAFRV 581
            TY+TLV    + GRF +A + ++ +                         D A+  F  
Sbjct: 650 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS 709

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +   G +       +LI A  +  +  EA A+   M E     D + +T L+  L++
Sbjct: 710 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 766



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 206/464 (44%), Gaps = 26/464 (5%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I AC   +++ +  + ++++   G+     + + ++  L +   ++ +  + LYK++  
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGA--RNLYKQMLN 191

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I+      N +I   +K G   +A   L       LSP   TY ++I     +     
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VF+ + + G  P +  Y+ L+ G    G + +A  ++ EM   G+ P  +TY+L I 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A       E A  ++  M+    +PN   Y+ +++G    G+ +    +  +M   G+ P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +T  YN +I+          A+  F  M   G   +T T+N +I      G  ++A  LF
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E+M + G  P   TYN +IN    +    +  RLL  M+  G  P+  TY  LV  + + 
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491

Query: 559 GR-------FDDAIEC-----------------LEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           G+       F + +EC                  +G  D A++  + M   G  P+  + 
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           N++IN   ++ R +EA  +   M E GL P+V+TYTTL+  L R
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCR 595



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 204/480 (42%), Gaps = 46/480 (9%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVPAPL------WHSLLKNLCSSNSSIDLAYAV 149
           N ++ +AL S  S L ++E  +   ++ +   L      +++L+  LC        A  +
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVG-GRFSTALKI 395

Query: 150 VSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDL 209
             W++ H               +L  ++                 TYN +I       D+
Sbjct: 396 FHWMEGHG--------------SLANTQ-----------------TYNEIIKGLCLGGDI 424

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQS-LTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           EKA+ L  KM + G     + Y+ +I   LT+ N  +++ L  L KE  C   E D    
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC---EPDEWTY 481

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N+++ GF+K G    A  +       GL+P   +Y A+I   S  G+   A ++ + ++E
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P  ++YNA++ G  K     +AE +  +M   G+LP+  TY+ LID     GR + 
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  +ME     PN + YS ++ G    G+        + M   G EP    Y+ ++ 
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVS 657

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +    + A      M   G  PD   + +L+  H K    D A ++F  ++ +G+  
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 717

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             + Y  +I  L +  + E+ + L  NM  +    + + +T LVD   + G  D  ++ L
Sbjct: 718 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 777



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 20/258 (7%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P   I   ++   R+  E +R    L E+   G     +  N ++    K+  +  A   
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           + +ML+ GI+P  +T+NTLI+   K G+   AE +  ++ +    P   TY  +I  LG 
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI--LGH 243

Query: 523 -QERWEDVK-RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            + R  D+   +   M  +G  PN VTY+TL++     GR D+A++ LE + ++      
Sbjct: 244 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK------ 297

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                G++P+       I A    + + EA  ++  MK+ G +P+V TYT L+  L R+ 
Sbjct: 298 -----GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352

Query: 641 KFHKVFSSYLFFNIYKML 658
           K       Y     +KML
Sbjct: 353 KLEVAIGLY-----HKML 365



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 9/168 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP---LTYNALISACARNDDLEKALNLMSKM 219
           YS L+  L R  + YEA  L +  +     P   + Y+ LI+ C +N +++ AL +   +
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC-KNLEVDHALKIFHSI 710

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+      Y  +I +L +  +++ +  Q L+  +   +   D  +   ++ G  K G
Sbjct: 711 EAKGFQLHLSIYRALICALCKAGQVEEA--QALFDNMLEKEWNADEIVWTVLVDGLLKEG 768

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           +    M+ L + +    +P   TY  +   LS  G++IE+E + ++LK
Sbjct: 769 ELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 203/406 (50%), Gaps = 11/406 (2%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YSL I       + D  + +KL  E+    ++ +    N  I G+ K  D       L +
Sbjct: 226 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 285

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  G++    TY  +I   SN G+  EA+ +FEE++E G++     Y +++    + G 
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +K A  +  EM   G++P  HTY  LI     AG+ E+A++++ EM+      N  I++ 
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY + G      ++   M+  G+E D   YN +     K N    A      M+  G
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P+T+++ TLID + K G +  A+ +F EM+E+G  P   TYN++I+   ++   ++  
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +L   +  +GL+P+V T T+L  I+G         EC++G  D A+  F  M   GL P+
Sbjct: 526 KLKDELENRGLIPDVYTCTSL--IHG---------ECIDGKVDMALKLFDEMPQRGLVPN 574

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +   ++I+   +D R  EAF +   MKE GL PD   Y++L+ +L
Sbjct: 575 VVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 202/463 (43%), Gaps = 13/463 (2%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
            R +     ++ L    A N    +AL     M + G+H D  +  + + +L R  ++DS
Sbjct: 149 NRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDS 208

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            L  + ++ +    +E+    L  V+ G  K GD     + +      G+     TY A 
Sbjct: 209 CL--RFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAF 266

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I              +   +++ G+      Y  L+ G+  +G +++A+ +  EM   G+
Sbjct: 267 IEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGI 326

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             D + Y+ +I     +G  + A ++  EM      P++  Y  ++ G    G+ +    
Sbjct: 327 EADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 386

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           ++ EM+  G++ +   +N +ID + +   +  A+     M  +G+E D   +N++     
Sbjct: 387 LVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLC 446

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K  R D A+ L   M ERG  P T ++  +I++  ++  + + KR+   M  +G +PN++
Sbjct: 447 KLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNII 506

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L+D Y + G   +A      L D+  N        GL P      SLI+    D +
Sbjct: 507 TYNVLIDGYSKRGNMKEA----HKLKDELENR-------GLIPDVYTCTSLIHGECIDGK 555

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              A  +   M + GL P+VVTYT ++  L +  +  + F  Y
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY 598



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 37/366 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYNA I    +  DL     +++ M ++G  C+ + Y+L+I   +   KI+ +  Q+L+
Sbjct: 261 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEA--QRLF 318

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    IE D  +   +I    ++G+  +A+         GL P   TY A+I  +  +
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-------- 365
           G+   A+ +  E++  G+      +N L+ GY + G + +A  +   ME+ G        
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 366 ---------------------------VLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
                                      V P+  +++ LID Y   G +  A+ V +EME 
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ ++ GY  RG  +   ++  E+++ G+ PD +    +I        +  
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDM 558

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  FD M   G+ P+ +T+  +I    K GR + A +L++EM+E G  P  T Y+ ++ 
Sbjct: 559 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618

Query: 519 LLGEQE 524
            L   E
Sbjct: 619 SLHSAE 624


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 229/495 (46%), Gaps = 36/495 (7%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           H +GR+ +L +     +++ L P  ++Y A+I+      DL  A  L+ KM   G   + 
Sbjct: 129 HNMGRALELLDEM---EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 185

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + YS +I       +I+ +  ++L   + C  +  D    N +I   +KAG   +A  +L
Sbjct: 186 VVYSTLIMGYASEGRIEEA--RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              QG GL P   T+ A I   S +G+  EA   F+E+ + GL P    Y  L+ G+ K 
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 303

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L +A  +   +   GVLPD  T S  I      GR + A  V  E++     P+ F Y
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S +++G+  +GE ++ F++  EM   G+ P+   YN ++D   K   +  A   FD M  
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G+EPD++T++T+ID + K      A  LF EM  +G  P +  YN +++   ++   E 
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L   M  +G     +++ TL+D Y +S +  +A +            F+ M    + 
Sbjct: 484 AMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQ-----------LFQEMIAKQIM 531

Query: 589 PSNLALNSLINAFGEDQRDAEA-----------------FAVLQYMKENGLKPDVVTYTT 631
           P ++   ++I+   +  +  EA                 FA+ + M   G+KPD VTY  
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGL 591

Query: 632 LMKALIRVDKFHKVF 646
           ++ A  + D   + F
Sbjct: 592 VIYAHCKEDNLVEAF 606



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 228/489 (46%), Gaps = 18/489 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNA---LISACARNDDLEKALNLMSKMR 220
           Y+I+   L R++++ EA L  +  + T L   YNA   LI    R  D+++ L +   M 
Sbjct: 13  YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y+++I  L +  K++ +   ++ K +     + + +    +I G+ +  +
Sbjct: 73  SCGIPINLITYNVLIHGLCKFGKMEKA--AEILKGMITLGCKPNSRTFCLLIEGYCREHN 130

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +   L P   +Y A+I  L +      A  + E++  SGLKP    Y+ 
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +++A  ++  M  SGV PD   Y+ +I   + AG+ E A   L E++   
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP++  +   + GY   G+     +   EM   G+ P+   Y V+I+   K   L  A+
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 310

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F  + + G+ PD  T +  I    K GR   A ++F E++E+G  P   TY+ +I+  
Sbjct: 311 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 370

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +Q   E    L   M  +G+ PN+  Y  LVD   +SG    A +  +G+ ++      
Sbjct: 371 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK------ 424

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                GL+P ++  +++I+ + + +  AEAF++   M   G++P    Y  L+    +  
Sbjct: 425 -----GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 641 KFHKVFSSY 649
              K  + +
Sbjct: 480 DMEKAMNLF 488



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 174/376 (46%), Gaps = 24/376 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P T TY  +   L  + R  EA+  FEE++++GLKP   A +AL+ G+++ G + + 
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M   G+  +  TY++LI      G+ E A  +LK M     KPNS  +  ++ G
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y       R  ++L EM+   + P    Y  MI+       L  A    ++M   G++P+
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + ++TLI  +   GR + A  L + M   G  P    YN +I+ L +  + E+    L 
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--------------------- 573
            ++ +GL P+ VT+   +  Y ++G+  +A +  + + D                     
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 574 ---QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
              +A++ FR +   G+ P     ++ I+   ++ R  EA  V   +KE GL PDV TY+
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 631 TLMKALIRVDKFHKVF 646
           +L+    +  +  K F
Sbjct: 365 SLISGFCKQGEVEKAF 380



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 214/444 (48%), Gaps = 43/444 (9%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-------TYNALISACARNDDLEKALNLMS 217
           LY++LI+   ++  L EA  LS  + L  L       T +A I    +N  +++AL + S
Sbjct: 292 LYTVLINGHFKAGNLMEA--LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 349

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           ++++ G   D   YS +I    +  +++ +   +L+ E+    I  +  + N ++ G  K
Sbjct: 350 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAF--ELHDEMCLKGIAPNIFIYNALVDGLCK 407

Query: 278 AGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +GD  +A + F GM +  GL P + TY+ +I     S    EA ++F E+   G++P + 
Sbjct: 408 SGDIQRARKLFDGMPEK-GLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YNAL+ G  K G ++ A  +  EM + G      +++ LID Y  + + + A  + +EM
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEM 525

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   Y+ ++  +   G+ +    + KEM+           N+++DT       
Sbjct: 526 IAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER---------NLIVDT------- 569

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
               A F++M+++G++PD +T+  +I  H K      A +L +E+  +G     T ++++
Sbjct: 570 --VFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 627

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I  L ++E   +  +LL  M   GL P++   +TLV  + ++G+ D+A    EG+     
Sbjct: 628 ITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGV----- 682

Query: 577 NAFRVMRTDGLKPSNLALNSLINA 600
                 ++ GL P    L  L+N 
Sbjct: 683 ------KSLGLVPDTTTLIDLVNG 700



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 11/269 (4%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G++P+ +TY+++      A R   A++  +EM+ +  KP+    S ++ G+   G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++   M S G+  +   YNV+I    K+  +  A      M++ G +P++ T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI+ + +     RA EL +EM++R   P   +Y  MIN L   +      +LL  M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L PNVV Y+TL+  Y   GR ++A   L+G+S             G+ P     N++I+ 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMS-----------CSGVAPDIFCYNAIISC 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
             +  +  EA   L  ++  GLKPD VT+
Sbjct: 230 LSKAGKMEEASTYLLEIQGRGLKPDAVTF 258



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 56/323 (17%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           ++++L+  LC S   I  A  +   + +  L     + YS +I    +SE + EAF L  
Sbjct: 397 IYNALVDGLCKS-GDIQRARKLFDGMPEKGL-EPDSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 186 ---SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY------------HC---- 226
              S+  +     YNAL+  C +  D+EKA+NL  +M Q G+            +C    
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK 514

Query: 227 ------------------DFINYSLVIQSLTRTNKID-SSLLQK--------------LY 253
                             D + Y+ VI    +  K++ ++LL K              L+
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++    ++ D      VI    K  +  +A +      G G+  K   +  +ITAL   
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  + +E+ E GLKP   A + L++ + + G + +A  V   ++  G++PD  T 
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694

Query: 374 SLLIDAYANAGRWESARIVLKEM 396
             L++   N    E AR ++K++
Sbjct: 695 IDLVNGNLNDTDSEDARNLIKQL 717


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 226/485 (46%), Gaps = 24/485 (4%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L++ +L+ A   L +  +  E F L + +   P   T N ++S   + +  + A  L ++
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +         ++++I  L +  K+  +  ++    +E   ++ +    N +I G    
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKA--KEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A       +  GL P   TY + I+ L   GR  EA  +  ++ E GL P    Y
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+ GY   G L  A     EM   G++    TY+L I A    GR   A  ++KEM  
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P++  ++ ++ GY   G+ +R F +L EM   G++P    Y  +I   GK N +  
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A A F ++  EG+ PD I +N LID H   G  DRA +L +EM      P   TYN ++ 
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
               + + E+ ++LL  M+ +G+ P+ ++Y TL+  Y + G   D              A
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKD--------------A 550

Query: 579 FRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           FRV   M T G  P+ L  N+LI    ++Q    A  +L+ M   G+ PD  TY ++++A
Sbjct: 551 FRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610

Query: 636 LIRVD 640
           +  VD
Sbjct: 611 METVD 615



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 210/449 (46%), Gaps = 33/449 (7%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTR--TNKIDSSLLQKLYKEIEC----------- 258
            L+L+S ++   +  D    SL I  L R  + K   +L+Q+L     C           
Sbjct: 77  VLHLLSHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNRTIFDELAL 136

Query: 259 --DKIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
             D+++    L+ D++V  + +    ++A+    + +  G  P   T   +++      R
Sbjct: 137 ARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNR 196

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
           T  A  ++ E+    ++     +N ++    K G LK A+  +  ME  GV P+  TY+ 
Sbjct: 197 TQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNT 256

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I  +   G+++ AR++ + M+    +P+ + Y+  ++G    G  +    ++ +M   G
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   YN +ID +     L  A A  D M+S+GI    +T+N  I   F  GR   A+
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLV 552
            + +EM+E+G  P   T+NI+IN      R  D KR   LL  M  +G+ P +VTYT+L+
Sbjct: 377 NMIKEMREKGMMPDAVTHNILIN---GYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            + G+  R  +A    + L       F  ++ +GL P  +  N+LI+    +     AF 
Sbjct: 434 YVLGKRNRMKEA----DAL-------FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQ 482

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +L+ M    + PD +TY TLM+   R  K
Sbjct: 483 LLKEMDNMKVLPDEITYNTLMQGYCREGK 511



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 13/276 (4%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           + LL+ AY    +   A      ++     PN    +++L+ +      Q  + +  EM 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              +    + +N+MI+   K   L  A      M + G++P+ +T+NT+I  H   G++ 
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           RA  +F+ M+++G  P   TYN  I+ L ++ R E+   L+  M   GL+PN VTY  L+
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFR-VMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           D Y   G  D A             A+R  M + G+  S +  N  I+A   + R  +A 
Sbjct: 329 DGYCNKGDLDKAY------------AYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +++ M+E G+ PD VT+  L+    R     + F 
Sbjct: 377 NMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFG 412



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 11/208 (5%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  +++++  + +    + A+  F  +  +G  P+  T N ++    K  R   A  L+ 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM          T+NIMIN+L ++ + +  K  +G+M   G+ PNVVTY T+  I+G   
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTI--IHGH-- 261

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  CL G   +A   F+ M+  GL+P     NS I+   ++ R  EA  ++  M E
Sbjct: 262 -------CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLE 314

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            GL P+ VTY  L+          K ++
Sbjct: 315 GGLVPNAVTYNALIDGYCNKGDLDKAYA 342


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 252/524 (48%), Gaps = 27/524 (5%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           R +P  L+    ++K  C+ N  ID A +++  + KH  C    ++Y  LIH+L +  ++
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNE-IDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRV 268

Query: 180 YEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            EA  L +   L        T+N +I    + D + +A  ++++M   G+  D I Y  +
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQG 293
           +  L +  ++D++  + L+  I   +I     + N +I GF   G    A   L  M   
Sbjct: 329 MNGLCKIGRVDAA--KDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY ++I      G    A  V  +++  G KP   +Y  L+ G+ K+G + +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V++EM   G+ P+   ++ LI A+    R   A  + +EM     KP+ + ++ +++
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G  +  E +    +L++M S GV  +T  YN +I+ F +   +  A    + M+ +G   
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D IT+N+LI    + G  D+A  LFE+M   G+ P   + NI+IN L      E+     
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  +G  P++VT+ +L++   ++GR +D +             FR ++ +G+ P  + 
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL-----------TMFRKLQAEGIPPDTVT 671

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            N+L++   +     +A  +L    E+G  P+  T++ L++++I
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 232/485 (47%), Gaps = 23/485 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           SY ++  IL+   G   K+       +LS++   T  T+  ++ A    ++++ AL+L+ 
Sbjct: 184 SYNVVLEILVS--GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y  +I SL++ N+++ +L  +L +E+       D +  NDVI+G  K
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL--QLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
               ++A + +      G +P   TY  ++  L   GR   A+ +F  +     KP    
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +N L+ G+V  G L DA+ V+S+M  S G++PD  TY+ LI  Y   G    A  VL +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                KPN + Y+ ++ G+   G+    + VL EM + G++P+T  +N +I  F K + +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  F  M  +G +PD  T+N+LI    +      A  L  +M   G    T TYN +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN    +   ++ ++L+  M  QG   + +TY +L+              C  G  D+A 
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL-----------CRAGEVDKAR 584

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + F  M  DG  PSN++ N LIN         EA    + M   G  PD+VT+ +L+  L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644

Query: 637 IRVDK 641
            R  +
Sbjct: 645 CRAGR 649



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 181/398 (45%), Gaps = 31/398 (7%)

Query: 271 VIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           V++G   A    K + R L   +  G+  K + + +++     +G   +   +  E++  
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175

Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
              +P  K+YN +L+  V     K A  V  +M    + P   T+ +++ A+      +S
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L++M      PNS IY  ++             Q+L+EM   G  PD   +N +I 
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K++ ++ A    +RML  G  PD IT+  L++   K GR D A++LF  + +    P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
               +N +I+      R +D K +L +M  + G++P+V TY +L+  Y + G    A+E 
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C  G  D+A N    M  DGLKP+ +  N LI+AF +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           + R  EA  + + M   G KPDV T+ +L+  L  VD+
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 26/443 (5%)

Query: 215 LMSKMRQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           LM +MR + Y C+  F +Y++V++ L   N     +   ++ ++   KI         V+
Sbjct: 168 LMLEMR-NVYSCEPTFKSYNVVLEILVSGNC--HKVAANVFYDMLSRKIPPTLFTFGVVM 224

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             F    +   A+  L      G  P +  Y  +I +LS   R  EA  + EE+   G  
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  + +N ++ G  K   + +A  +V+ M   G  PD+ TY  L++     GR ++A   
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA--- 341

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFG 451
            K++     KP   I++ ++ G+   G       VL +M +S G+ PD   YN +I  + 
Sbjct: 342 -KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A+     M ++G +P+  ++  L+D   K G+ D A  +  EM   G  P T 
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-DAIECLEG 570
            +N +I+   ++ R  +   +   M  +G  P+V T+ +L+     SG  + D I+    
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI-----SGLCEVDEIK---- 511

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
               A+   R M ++G+  + +  N+LINAF       EA  ++  M   G   D +TY 
Sbjct: 512 ---HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568

Query: 631 TLMKALIR---VDKFHKVFSSYL 650
           +L+K L R   VDK   +F   L
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKML 591



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 2/330 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN+LI    +   +  AL ++  MR  G   +  +Y++++    +  KID +    +  
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA--YNVLN 448

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+  D ++ +    N +I  F K     +A+         G  P   T+ ++I+ L    
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  ++   G+   T  YN L+  +++ G +K+A  +V+EM   G   DE TY+
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI     AG  + AR + ++M      P++   + ++ G    G  +   +  KEM   
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD   +N +I+   +   +   +  F ++ +EGI PDT+T+NTL+    K G    A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQE 524
             L +E  E G+ P   T++I++  +  QE
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 149/347 (42%), Gaps = 15/347 (4%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  +I  L  +G     + +  ++K+ G+  +   + ++++ Y K G+      ++ EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172

Query: 362 ERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
                  P   +Y+++++   +    + A  V  +M      P  F +  ++  +    E
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L++M   G  P++  Y  +I +  K N ++ A+   + M   G  PD  T+N 
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K  R + A ++   M  RG+ P   TY  ++N L +  R +  K L   +    
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
             P +V + TL+  +   GR DDA   L   SD   +        G+ P     NSLI  
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVL---SDMVTSY-------GIVPDVCTYNSLIYG 398

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + ++     A  VL  M+  G KP+V +YT L+    ++ K  + ++
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 15/236 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAF-- 183
           ++SL+  LC  +   ++ +A+  WL +  +     +  + Y+ LI+A  R  ++ EA   
Sbjct: 497 FNSLISGLCEVD---EIKHAL--WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551

Query: 184 ---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              ++ Q   L  +TYN+LI    R  +++KA +L  KM +DG+    I+ +++I  L R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +  ++ ++  +  KE+       D    N +I G  +AG     +      Q  G+ P T
Sbjct: 612 SGMVEEAV--EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            T+  +++ L   G   +A  + +E  E G  P  + ++ LL+  +    L    F
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 188/372 (50%), Gaps = 11/372 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G++  G+   A R L   +  G+ P + TY ++I+ +   GR  EA  +F+++ E
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P    YN L+ GY   G L+ A     EM + G++P   TY+LL+ A    GR   
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++KEM      P++  Y+ ++ GY   G  +R F +  EM S G+EP    Y  +I 
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              + N +  A   F+++L +G+ PD I +N +ID H   G  +RA  L +EM  +   P
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+N ++     + + E+ + LL  M+ +G+ P+ ++Y TL+  YG+ G   DA    
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFX-- 509

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             + D+       M + G  P+ L  N+LI    ++Q    A  +L+ M   G+ PD  T
Sbjct: 510 --VRDE-------MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 560

Query: 629 YTTLMKALIRVD 640
           Y +L++ +  VD
Sbjct: 561 YLSLIEGMGNVD 572



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 24/333 (7%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP   +YN ++ GY   G ++ A  ++  M   G+ PD +TY  LI      GR E A
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  +M      PN+  Y+ ++ GY ++G+ +R F    EM   G+ P    YN+++  
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 +  A      M  +GI PD IT+N LI+ + +CG   RA +L  EM  +G  P 
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI---- 565
             TY  +I +L  + R ++   L   +  QG+ P+V+ +  ++D +  +G  + A     
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 566 --------------------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C EG  ++A      M+  G+KP +++ N+LI+ +G   
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +AF V   M   G  P ++TY  L+K L +
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 17/296 (5%)

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G LK A   +  ME  G  P+  +Y+ +I  Y++ G  E AR +L  M V   +P+S+ Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
             +++G    G  +    +  +M   G+ P+   YN +ID +     L  A +  D M+ 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +GI P   T+N L+   F  GR   A+++ +EM+++G  P   TYNI+IN      R  +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN---GYSRCGN 363

Query: 529 VKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            KR   L   M ++G+ P  VTYT+L+ +  +  R  +A +  E + DQ           
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ----------- 412

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           G+ P  +  N++I+    +     AF +L+ M    + PD VT+ TLM+   R  K
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 149/331 (45%), Gaps = 42/331 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI  + +  +L EA  L  +     L P  +TYN LI       DLE+A +   +M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y+L++ +L    ++  +    + KE+    I  D    N +I G+++ G+
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEA--DDMIKEMRKKGIIPDAITYNILINGYSRCGN 363

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A +A          G+ P   TY ++I  LS   R  EA+ +FE++ + G+ P    +NA
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+   G ++ A  ++ EM+R  V PDE T++ L+      G+ E AR++L EM+   
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQV--------------------------------- 427
            KP+   Y+ +++GY  RG+ +  F V                                 
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543

Query: 428 --LKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             LKEM + G+ PD   Y  +I+  G  + L
Sbjct: 544 ELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 11/177 (6%)

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G +P+ +++NT+I  +   G  + A  + + M+ +G  P + TY  +I+ + ++ R E+ 
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             L   M   GL+PN VTY TL+D Y           C +G  ++A +    M   G+ P
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGY-----------CNKGDLERAFSYRDEMVKKGIMP 311

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           S    N L++A   + R  EA  +++ M++ G+ PD +TY  L+    R     + F
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 20/155 (12%)

Query: 496 ELFEEM---QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           ELF+E+   ++R     +   +I+ +LL  + + +  +  +G M   G  PNVV+Y T++
Sbjct: 162 ELFDELTLSRDR----LSVKSSIVFDLL--EGKLKKAREFIGFMEGLGFKPNVVSYNTII 215

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             Y   G  + A   L+            MR  G++P +    SLI+   ++ R  EA  
Sbjct: 216 HGYSSRGNIEGARRILDA-----------MRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +   M E GL P+ VTY TL+          + FS
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 299



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 42/196 (21%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L R  ++ EA  L ++   Q ++P  + +NA+I     N ++E+A  L+ +M 
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + ++ ++Q   R  K++ +  + L  E++   I+ D    N +I G+ + GD
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEA--RMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503

Query: 281 ASKA------MRFLGMAQGV-----------------------------GLSPKTATYAA 305
              A      M  +G    +                             G+SP  +TY +
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 563

Query: 306 VITALSNSGRTIEAEA 321
           +I  + N    +E  A
Sbjct: 564 LIEGMGNVDTLVEDNA 579


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 231/484 (47%), Gaps = 18/484 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S ++ EA  + +   +     + +TYN+LISA AR+  LE+A+ L +
Sbjct: 139 KVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKN 198

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    RT K +S++  ++++E+     + +    N +I     
Sbjct: 199 QMVERGIKLDVFTYTAMLSGFVRTGKDESAM--RVFEEMRTAGCKPNICTFNALIKMHGN 256

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M+     +     P   T+  ++     +G   E   VF+E+K  G  P    
Sbjct: 257 RGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDT 316

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  G WE +  +L EM+
Sbjct: 317 YNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQ 376

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   +  +L  Y +  E  R   + +E+ S  +EP       ++    K + L 
Sbjct: 377 DGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLL 436

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  AF  +  +G  PD  T N +I  + +     +  E+   M+E G+ P   TYN ++
Sbjct: 437 EAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLM 496

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +  + E +E  + +L  + A+G+ P++++Y T++  Y ++GR             +A +
Sbjct: 497 YMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMK-----------EASH 545

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  MR  GL P  +  N+ + ++  D    EA  V+ YM ++G KP+  TY +++    
Sbjct: 546 IFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYC 605

Query: 638 RVDK 641
           ++++
Sbjct: 606 KLNR 609



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 223/500 (44%), Gaps = 38/500 (7%)

Query: 167 SILIHALGRSEKL-YEAFLLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           +++I+ LG+  K+   A LL+   +    P    Y +LI+AC  N    +A+ +  KM +
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 222 DGYHCDFINYSLVIQSLTRT----NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +G     I Y++++    +     NKI       L++ ++   I  D    N +I    +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITG-----LFEGMKNAGILPDEYTYNTLITCCRR 116

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A       + +G  P   TY  ++     S R  EA  V  E++ +G  P    
Sbjct: 117 GSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVT 176

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN+L+  Y + G L++A  + ++M   G+  D  TY+ ++  +   G+ ESA  V +EM 
Sbjct: 177 YNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR 236

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +  KPN   ++ ++  + +RG++    +V +E+K     PD   +N ++  FG+     
Sbjct: 237 TAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDS 296

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                F  M   G  P+  T+NTLI  + +CG +D+A  +++ M + G  P  +TYN ++
Sbjct: 297 EVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVL 356

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD---- 573
             L     WE  +++L  M+     PN +T+ +L+  Y         +   E +      
Sbjct: 357 AALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIE 416

Query: 574 --------------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                               +A  AF  ++  G  P    LN++I  +G  Q   +   +
Sbjct: 417 PHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEI 476

Query: 614 LQYMKENGLKPDVVTYTTLM 633
           L +MKE+G  P + TY +LM
Sbjct: 477 LNFMKESGFTPSLATYNSLM 496



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 159/347 (45%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I  L   G+   A ++   L + G +P   AY +L+   V  G  ++A  V  +ME 
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W     + + M+ +   P+ + Y+ ++   R    ++
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               V ++MKS G  PD   YN ++D +GK   +  A+     M   G  P  +T+N+LI
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  + A EL  +M ERG      TY  M++      + E   R+   MR  G  
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  G+F + ++            F  ++     P  +  N+L+  FG
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMK-----------VFEEIKICCCVPDIVTWNTLLAVFG 290

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  TY TL+ A  R   F +  + Y
Sbjct: 291 QNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMY 337



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 14/315 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LISA +R    ++A+ +  +M   G   D   Y+ V+ +L R    + S  +K+  
Sbjct: 316 TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQS--EKILA 373

Query: 255 EIE---CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---LSPKTATYAAVIT 308
           E++   C   EL    L        + G      R L +A+ +    + P       ++ 
Sbjct: 374 EMQDGMCKPNELTHCSLLHAYANGKEIG------RMLALAEEICSGVIEPHAVLLKTLVL 427

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
             S     +EAE  F ELK  G  P     NA++  Y +   +     +++ M+ SG  P
Sbjct: 428 VNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTP 487

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
              TY+ L+  ++ +  +E +  VLKE+     KP+   Y+ ++  Y   G  +    + 
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIF 547

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM+ SG+ PD   YN  + ++   +    A+     M+  G +P+  T+N++ID + K 
Sbjct: 548 SEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKL 607

Query: 489 GRYDRAEELFEEMQE 503
            R D A +    + E
Sbjct: 608 NRRDDAIKFISSLHE 622



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 113/530 (21%), Positives = 210/530 (39%), Gaps = 89/530 (16%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y +  L+      S  E A+A+           F+  +S   VP  + ++ L ++   + 
Sbjct: 105 YTYNTLITCCRRGSLYEEAAAV-----------FEDMKSMGFVPDKVTYNTLLDVYGKSR 153

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
            I  A  V+  ++  N C    + Y+ LI A  R   L EA  L  +      +L   TY
Sbjct: 154 RIKEAIEVLREMEV-NGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTY 212

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            A++S   R    E A+ +  +MR  G   +   ++ +I+     N+   + + K+++EI
Sbjct: 213 TAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIK--MHGNRGKFAEMMKVFEEI 270

Query: 257 E-CDKI--------------------ELDGQL--------------LNDVIVGFAKAGDA 281
           + C  +                    E+ G                 N +I  +++ G  
Sbjct: 271 KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSF 330

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +AM         G++P  +TY AV+ AL+  G   ++E +  E+++   KP    + +L
Sbjct: 331 DQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSL 390

Query: 342 LKGYV-----------------------------------KMGYLKDAEFVVSEMERSGV 366
           L  Y                                    K   L +AE    E++R G 
Sbjct: 391 LHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGF 450

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  T + +I  Y           +L  M+ S   P+   Y+ ++  +     ++R+ +
Sbjct: 451 SPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEE 510

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           VLKE+ + G++PD   YN +I  + +   +  A   F  M   G+ PD IT+NT +  + 
Sbjct: 511 VLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYA 570

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
               ++ A ++   M + G  P   TYN +I+   +  R +D  + + ++
Sbjct: 571 ADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSL 620


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 230/490 (46%), Gaps = 32/490 (6%)

Query: 166 YSILIHALGRSEKLYEAFL-LSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           ++ L+ A+ R  + Y+A + LS++  L  L     T N LI+       ++   ++++K+
Sbjct: 93  FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G     I ++ +I  L +  +   +L  +L+ ++     + D      +I G  K G
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQAL--ELFDDMVARGCQPDVYTYTTIINGLCKMG 210

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + + A   +     VG  P   TY+ +I +L       EA  +F  +K  G+ P   +Y 
Sbjct: 211 ETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYT 270

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G       K+A  +++EM    ++PD  T+SLLID +   G    A+ VLK M   
Sbjct: 271 SLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM 330

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +PN   Y+ ++ GY  + E     ++   M + G +PD   Y+++I+ +     +  A
Sbjct: 331 GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEA 390

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+ M+ +G+ P+T+++ TLI    + G+   A ELF++M   GY P   TY++++  
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
             +Q       RL   M+   L PN+V YT L+D   +SG  + A +             
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EGL D+A+ AFR M  DG  P+  + N +I  F + + ++ A  ++ 
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 570

Query: 616 YMKENGLKPD 625
            M++ G   D
Sbjct: 571 EMRDKGFVAD 580



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 191/435 (43%), Gaps = 25/435 (5%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I ++ ++ ++ R  +   +++  L K++E   +  +   LN +I  F            
Sbjct: 90  IIQFNKLLSAIVRMRQYYDAVIS-LSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSV 148

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L     +GL P   T+  +I  L  +G   +A  +F+++   G +P    Y  ++ G  K
Sbjct: 149 LAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCK 208

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           MG    A  ++ +M   G  PD  TYS LID+         A  +   M+     P    
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G      W+    +L EM S  + PD   ++++ID F K   +  A      M 
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+EP+ IT+N+L+  +        A +LF+ M  RG  P   +Y+I+IN     +R +
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRID 388

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------------- 566
           + K+L   M  QGL PN V+YTTL+  + Q G+  +A E                     
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLL 448

Query: 567 ---CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
              C +G   +A   FR M+   LKP+ +    LI++  +      A  +   +  +GL+
Sbjct: 449 EGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQ 508

Query: 624 PDVVTYTTLMKALIR 638
           PDV  YTT++  L +
Sbjct: 509 PDVQIYTTIINGLCK 523



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 212/457 (46%), Gaps = 48/457 (10%)

Query: 135 NLCSSN---------SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-- 183
           N C+ N           +DL ++V++ + K  L  +  + ++ LI+ L ++ +  +A   
Sbjct: 125 NTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTI-ITFTTLINGLCKAGEFAQALEL 183

Query: 184 ---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              ++++  +    TY  +I+   +  +   A  L+ KM + G   D + YS +I SL +
Sbjct: 184 FDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK 243

Query: 241 TNKID---------------------SSLLQKL-----YKEIECDKIELDG-QLLNDVIV 273
              ++                     +SL+Q L     +KE      E+    ++ D++ 
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303

Query: 274 G------FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
                  F K G+  +A   L     +G+ P   TY +++   S     +EA  +F+ + 
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMI 363

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
             G KP   +Y+ L+ GY  +  + +A+ + +EM   G+ P+  +Y+ LI A+   G+  
Sbjct: 364 TRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR 423

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            AR + K+M  +   P+   YS +L G+  +G   + F++ + M+ + ++P+   Y ++I
Sbjct: 424 EARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILI 483

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D+  K   L+HA   F  +   G++PD   + T+I+   K G  D A E F +M+E G  
Sbjct: 484 DSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP 543

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           P   +YN++I    + +      +L+G MR +G + +
Sbjct: 544 PNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 11/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLSP T T   +I             +V  ++ + GL+P    +  L+ G  K G    A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  +M   G  PD +TY+ +I+     G   +A  ++K+M     +P+   YS ++  
Sbjct: 181 LELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDS 240

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                       +   MK+ G+ P    Y  +I     ++    A A  + M S  I PD
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPD 300

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T++ LID   K G    A+ + + M E G  P   TYN +++    Q    + ++L  
Sbjct: 301 IVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFD 360

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  P+V +Y+ L++ Y    R D+A +            F  M   GL P+ ++ 
Sbjct: 361 VMITRGCKPDVFSYSILINGYCMVKRIDEAKQ-----------LFNEMIHQGLTPNTVSY 409

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            +LI+AF +  +  EA  + + M  NG  PD+ TY+ L++   +     K F
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 25/203 (12%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY-DRAEELFEEMQERGYFPCTTTYNIMI 517
           A+A+F+ ML     P  I +N L+    +  +Y D    L ++M+  G  P T T NI+I
Sbjct: 74  ALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILI 133

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------- 566
           N     +  +    +L  +   GL P ++T+TTL++   ++G F  A+E           
Sbjct: 134 NCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQ 193

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C  G +  A    + M   G +P  +  ++LI++  +D+   EA  +
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
             YMK  G+ P VV+YT+L++ L
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGL 276



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 7/212 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YSILI+     +++ EA  L      Q LTP  ++Y  LI A  +   L +A  L   M 
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +GY  D   YS++++   +   +  +   +L++ ++   ++ +  +   +I    K+G+
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAF--RLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A +        GL P    Y  +I  L   G   EA   F +++E G  P   +YN 
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +++G+++      A  ++ EM   G + DE T
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           LP ++ +  L+    +  ++ DA+          ++  + M   GL P+   LN LIN F
Sbjct: 87  LPCIIQFNKLLSAIVRMRQYYDAV----------ISLSKQMELAGLSPNTCTLNILINCF 136

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              Q     F+VL  + + GL+P ++T+TTL+  L +  +F
Sbjct: 137 CLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEF 177


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 246/512 (48%), Gaps = 27/512 (5%)

Query: 139 SNSSIDLAYAVVSWLQKHNLCY-SYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP- 193
           SN+ +D A ++ + L + N    ++E  ++ ++ +L +S+  +    LSQ+     + P 
Sbjct: 62  SNNDVDDAVSLFNRLLRRNTTPPAFE--FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +  N LI+   +   +  A ++ +K+ + GY  D I ++ +I+ L    +I  + L   
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFL--F 177

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           + ++       D      +I G  K G+   A+  L    G  + P    Y  +I ++  
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
                EA  +F E+   G+ P    Y+AL+ G+  +G L DA  + ++M    + PD +T
Sbjct: 238 VKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           +++L++A+   G+ +  + V   M     KPN   Y+ ++ GY    E  +   +   M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV PD   Y++MI+ F K      AM  F  M  + I PD +T+++LID   K GR  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +L ++M +RG  P   TYN +++ L +  + +    LL  ++ +G+ PN+ TY+ L+
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS---LINAFGEDQRDAE 609
               QSG+ +DA +  EGL               +K  NL +++   +I  F  +    E
Sbjct: 478 KGLCQSGKLEDARKVFEGLL--------------VKGHNLNVDTYTIMIQGFCVEGLFNE 523

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A A+L  M++NG  PD  TY  ++ +L + D+
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 196/425 (46%), Gaps = 13/425 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y  LIH L +  +   A  L QR     + P  + YN +I +  +   + +A +L S
Sbjct: 190 QISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + YS +I       K++ ++   L+ ++  + I+ D    N ++  F K
Sbjct: 250 EMISKGISPDVVTYSALISGFCILGKLNDAI--DLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +      M    G+ P   TY +++          +A+++F  + + G+ P  ++
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ ++ G+ K+    +A  +  EM R  ++PD  TYS LID  + +GR   A  ++ +M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P    Y+ IL       +  +   +L ++K  G++P+ + Y+++I    +   L 
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ +L +G   +  T+  +I      G ++ A  L  +M++ G  P   TY I+I
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L +++  +  ++LL  M A+G+ P  +       I+ Q  +  D     + L++Q+V 
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGVRPRQIA------IWFQKKKEYDVSSEPKTLTEQSVP 601

Query: 578 AFRVM 582
            F+ M
Sbjct: 602 KFKAM 606



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 162/353 (45%), Gaps = 11/353 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P       +I      G    A +VF ++ + G  P T  +  L+KG    G ++ A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                ++   G   D+ +Y  LI      G   +A  +L+ ++ +  +PN  +Y+ I+  
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     F +  EM S G+ PD   Y+ +I  F     L+ A+  F++M+ E I+PD
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N L++   K G+    + +F+ M ++G  P   TYN +++     +     K +  
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G+ P++ +Y+ +++ + +  +FD           +A+N F+ M    + P  +  
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFD-----------EAMNLFKEMHRKNIIPDVVTY 403

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +SLI+   +  R + A  ++  M + G+ P + TY +++ AL ++ +  K  +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIA 456



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 151/341 (44%), Gaps = 11/341 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y++  T   ++    +A ++F  L      P    +N +L   VK  +     ++  +M
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E  G+ P+    ++LI+ +   G    A  V  ++      P++  ++ ++ G   +G+ 
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q+ F    ++ + G   D   Y  +I    K      A+    R+    ++P+ + +NT+
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K    + A +LF EM  +G  P   TY+ +I+      +  D   L   M  + +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENI 291

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+V T+  LV+ +           C +G   +    F +M   G+KP+ +  NSL++ +
Sbjct: 292 KPDVYTFNILVNAF-----------CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              +   +A ++   M + G+ PD+ +Y+ ++    ++ KF
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 117/314 (37%), Gaps = 67/314 (21%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S +K N   YS     +    +      +   +      P    +N ++ +  K    H 
Sbjct: 44  SSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHT 103

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +    +M   GI+P+ +  N LI+C  + G    A  +F ++ + GY P T T+  +I 
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIK 163

Query: 519 LL--------------------------------------GEQERWED-VKRLLGNMRAQ 539
            L                                      GE     D ++R+ GN+   
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL--- 220

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQA 575
            + PNVV Y T++D   +    ++A +                        C+ G  + A
Sbjct: 221 -VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           ++ F  M  + +KP     N L+NAF +D +  E   V   M + G+KP+ VTY +LM  
Sbjct: 280 IDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDG 339

Query: 636 LIRVDKFHKVFSSY 649
              V + +K  S +
Sbjct: 340 YCLVKEVNKAKSIF 353


>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 805

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 272/587 (46%), Gaps = 51/587 (8%)

Query: 85  TPLLNFLSENSNSE----SASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSN 140
           TP  +FLS  + +     S++ L + PS L      L    RA   P   SLLK L   +
Sbjct: 73  TPSTSFLSPAAQALVLDLSSTPLPALPSFLASRRDDL---LRAADLP---SLLKAL-ELS 125

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK------LYEAFLLSQRQRLTPL 194
              + A A++ W +           + +++ ALGR  +      L +   L    RL   
Sbjct: 126 GHWEWALALLRWARAEGAA-DGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVR 184

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            Y  ++ A +R    E+AL L  ++R++G     + Y++V+    R  +    ++  L  
Sbjct: 185 AYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVA-LLA 243

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +E DG   + VI    + G   +A+ F    +  G +P   TY A++     +G
Sbjct: 244 DMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAG 303

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  V  E++++G KP    YN L   Y + G+ ++A   +  M   G+LP+  TY+
Sbjct: 304 NYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYN 363

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            ++ AY NAG+ + A  +   M+ +   P +  Y+ +L     +  +    ++L EM  S
Sbjct: 364 TIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRS 423

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   +N ++   GK     +     + M S  +E    T+NTLI  + +CG    A
Sbjct: 424 GCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANA 483

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ++++EM   G+ PC TTYN ++N+L  Q  W   + ++  M+++G  PN ++Y+ L+  
Sbjct: 484 FKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQC 543

Query: 555 YGQSGRFD--DAIE------------------------C--LEGLSDQAVNAFRVMRTDG 586
           + + G     +AIE                        C  LEG+      AF+ ++  G
Sbjct: 544 HAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIE----RAFQEVKARG 599

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            KP  + LNS+++ + ++   ++A  + + +++ GL PD++TY +LM
Sbjct: 600 HKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLM 646



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 245/597 (41%), Gaps = 131/597 (21%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HAL   GR E+    F   +R+ + P  +TYN ++    R      + + L++ M
Sbjct: 186 YTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADM 245

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQ-------- 250
           R  G   D    S VI +  R   +D                     ++LLQ        
Sbjct: 246 RAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNY 305

Query: 251 ----KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               ++ +E+E    + D    N++   +A+AG   +A + +    G GL P T TY  +
Sbjct: 306 TEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTI 365

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +TA  N+G+  EA A+F+ +K++G  P T  YN +L    K         ++ EM RSG 
Sbjct: 366 MTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGC 425

Query: 367 LPDE-----------------------------------HTYSLLIDAYANAGRWESARI 391
            P+                                     TY+ LI AY   G   +A  
Sbjct: 426 TPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFK 485

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  EM  +   P    Y+ +L     +G+W     ++ +MKS G +P+   Y++++    
Sbjct: 486 MYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHA 545

Query: 452 K---------------------------------YNC--LHHAMAAFDRMLSEGIEPDTI 476
           K                                 + C  L     AF  + + G +PD +
Sbjct: 546 KGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLV 605

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-QERWEDVKRLLGN 535
             N+++  + K G Y +A E+FE +++ G  P   TYN ++++  +  E WE  +++L  
Sbjct: 606 ILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWE-AEKILNR 664

Query: 536 MR---------AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           +R          Q L P+VV+Y T+++ +           C EGL  +A      M  DG
Sbjct: 665 LRSSQSQQQQQQQQLKPDVVSYNTVINGF-----------CKEGLIKEAQRVLSEMIADG 713

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           + P  +  ++L+  +   +  AEA  V+ YM +  LKP  +TY  ++ +  R  ++ 
Sbjct: 714 VAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYE 770



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/427 (22%), Positives = 193/427 (45%), Gaps = 16/427 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A G + K+ EA  L  R +         TYN ++    +       L ++ +M 
Sbjct: 362 YNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMS 421

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + ++ ++    +      S + ++ + ++  K+EL     N +I  + + G 
Sbjct: 422 RSGCTPNRVTWNTLLAVCGKRGM--ESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGS 479

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A +        G +P   TY A++  LS  G    A ++  ++K  G KP   +Y+ 
Sbjct: 480 RANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSL 539

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+ + K G     E +  E+ +  + P       L+ A     R E      +E++   
Sbjct: 540 LLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARG 599

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  I + +L+ Y   G + +  ++ + ++  G+ PD   YN ++D + K N    A 
Sbjct: 600 HKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAE 659

Query: 461 AAFDRM---------LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
              +R+           + ++PD +++NT+I+   K G    A+ +  EM   G  PC  
Sbjct: 660 KILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVI 719

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY+ ++     +E + + + ++G M  + L P  +TY  +VD Y ++ R++DA + L  +
Sbjct: 720 TYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFLAVV 779

Query: 572 SDQAVNA 578
           ++   N+
Sbjct: 780 AEADTNS 786



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 13/368 (3%)

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALL 342
           A+  L  A+  G +   A +  V+ AL   GR     A+ +E+    G +   +AY  +L
Sbjct: 131 ALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRAYTTVL 190

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHA 401
               + G  + A  +  E+ R GV P   TY++++D Y   GR W     +L +M  +  
Sbjct: 191 HALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGV 250

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P+ F  S ++A     G         +++K+ G  P    YN ++  FGK      A+ 
Sbjct: 251 EPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALR 310

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
               M   G +PD +T+N L   + + G Y  A +  + M  +G  P T TYN ++   G
Sbjct: 311 VLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYG 370

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
              + ++   L   M+  G +P   TY  ++ + G+  RF   +E L  +S         
Sbjct: 371 NAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMS--------- 421

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               G  P+ +  N+L+   G+   ++    VL+ MK   ++    TY TL+ A  R   
Sbjct: 422 --RSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGS 479

Query: 642 FHKVFSSY 649
               F  Y
Sbjct: 480 RANAFKMY 487



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 13/228 (5%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTIT 477
           G W+    +L+  ++ G       + +++   G+        A  D M L  G   D   
Sbjct: 126 GHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEMPLPPGARLDVRA 185

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGNM 536
           + T++    + GRY+RA  LF+E++  G  P   TYN+++++ G   R W  V  LL +M
Sbjct: 186 YTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRSWPRVVALLADM 245

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           RA G+ P+  T +T++   G+           +GL D+AV  F  ++  G  P  +  N+
Sbjct: 246 RAAGVEPDGFTASTVIAAAGR-----------DGLVDEAVAFFEDLKARGHAPCVVTYNA 294

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           L+  FG+     EA  VL+ M++ G KPD VTY  L  +  R   + +
Sbjct: 295 LLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQE 342



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 59/333 (17%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           +  LLN LS   +  +A ++ S   S         E ++  P  + +SLL    +   + 
Sbjct: 502 YNALLNVLSRQGDWTAARSIVSKMKS---------EGFK--PNDMSYSLLLQCHAKGGNA 550

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALG--RSEKLYEAFLLSQRQRLTP--LTYNAL 199
               A+   + + N+  S+ +L +++I      R E +  AF   + +   P  +  N++
Sbjct: 551 AGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSM 610

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKL----- 252
           +S  A+N    KA+ +   + Q G   D I Y+ ++    ++N+      +L +L     
Sbjct: 611 LSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQS 670

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            ++ +  +++ D    N VI GF K G   +A R                          
Sbjct: 671 QQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQR-------------------------- 704

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
                    V  E+   G+ P    Y+ L+ GY       +A  VV  M +  + P E T
Sbjct: 705 ---------VLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELT 755

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           Y  ++D+Y  A R+E AR  L    V+ A  NS
Sbjct: 756 YRRVVDSYCRAKRYEDARDFLA--VVAEADTNS 786


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 228/487 (46%), Gaps = 18/487 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y + I A GR  +  +A  L +    +   P    Y+A+I ACA+    + A+  + +M 
Sbjct: 36  YCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMP 95

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D  +Y   I +  R  +   +L   L +E+    +  +  + N  I   AKAG 
Sbjct: 96  TKGIAPDARSYGAAINACARGGRWKIAL--DLLREMLARDVTPNVIIYNSAINSCAKAGQ 153

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+  +     VGL+P   +Y++ I+A    GR  EA  +FE+++ SG+ P    Y +
Sbjct: 154 WEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGS 213

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +      G  K+A  ++ ++   G+ P+  +YS +I A A  G+W+ A  +L+EM+   
Sbjct: 214 AIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMR 273

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+  +      G W+    +L+EM + G+ PD   Y+ +ID   K +    A+
Sbjct: 274 LAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAI 333

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M + G+ P+ I++N+ ID   K G++  A+ L  EM   G       YN  I   
Sbjct: 334 DILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAAC 393

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            + E+W++   LL  M   GL   V +Y++ +D  G+   +  A E L           R
Sbjct: 394 AKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELL-----------R 442

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M T GL P+ +  NS I+A G   +  EA  +L+ M   GL PDV +Y++ + A  + D
Sbjct: 443 EMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGD 502

Query: 641 KFHKVFS 647
           ++ +  +
Sbjct: 503 QWKEALA 509



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 232/504 (46%), Gaps = 31/504 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y   I+A  R  +   A  L +    + +TP  + YN+ I++CA+    E A++L+ +M 
Sbjct: 106 YGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMA 165

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I+YS  I +  R  + + +L  +L++++    +  D       I   A  G 
Sbjct: 166 TVGLAPDVISYSSAISACGRGGRWEEAL--ELFEDMRTSGVAPDVITYGSAIAACANGGR 223

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L     VGL+P   +Y++VITA +  G+   A  +  E+K   L P    YNA
Sbjct: 224 WKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNA 283

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +    K G  K+A  ++ EM   G+ PD  +YS +IDA +   RW+ A  +L+EM    
Sbjct: 284 AIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVG 343

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  Y+  +      G+W+    +L+EM ++GV      YN  I    K      A+
Sbjct: 344 LSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEAL 403

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A    M + G+     ++++ ID   K   + +A+EL  EM   G  P    YN  I+  
Sbjct: 404 ALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDAC 463

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
           G  ++WE+   LL  M   GL P+V +Y++ +    +  ++ +A+  L+ +S        
Sbjct: 464 GRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDL 523

Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                             AV     MR  GL P+ ++ +S I+A     +  E  A+L+ 
Sbjct: 524 ICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEE 583

Query: 617 MKENGLKPDVVTYTTLMKALIRVD 640
           M+ +G+ PDV+TY  LM    + D
Sbjct: 584 MRGSGVVPDVITYHALMVTCAKYD 607



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 12/370 (3%)

Query: 276 AKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           +++GD  KA+R + GM +  G      +Y   ITA    G+  +A  +  E+   G  P 
Sbjct: 8   SRSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPD 67

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
             AY+A++    K G  K A F + EM   G+ PD  +Y   I+A A  GRW+ A  +L+
Sbjct: 68  LSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLR 127

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM      PN  IY+  +      G+W+    ++KEM + G+ PD   Y+  I   G+  
Sbjct: 128 EMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGG 187

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
               A+  F+ M + G+ PD IT+ + I      GR+  A  L  ++   G  P   +Y+
Sbjct: 188 RWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYS 247

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I    ++ +W+    LL  M+A  L PN++TY   +D   + GR+ +AI+ L      
Sbjct: 248 SVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLL------ 301

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                R M T GL P  ++ +S+I+A  +  R  EA  +L+ M   GL P+ ++Y + + 
Sbjct: 302 -----REMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAID 356

Query: 635 ALIRVDKFHK 644
           A  +  ++ +
Sbjct: 357 ACAKGGQWKE 366



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 218/483 (45%), Gaps = 18/483 (3%)

Query: 166 YSILIHAL--GRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I A   G   K+   FL+    + + P   +Y A I+ACAR    + AL+L+ +M 
Sbjct: 71  YSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREML 130

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 + I Y+  I S  +  + + ++   L KE+    +  D    +  I    + G 
Sbjct: 131 ARDVTPNVIIYNSAINSCAKAGQWEIAV--SLVKEMATVGLAPDVISYSSAISACGRGGR 188

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+      +  G++P   TY + I A +N GR  EA ++  ++   GL P   +Y++
Sbjct: 189 WEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSS 248

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K G  K A  ++ EM+   + P+  TY+  IDA A  GRW+ A  +L+EM    
Sbjct: 249 VITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVG 308

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS ++        W+    +L+EM + G+ P+   YN  ID   K      A 
Sbjct: 309 LPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAK 368

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M + G+    I +N+ I    K  ++  A  L  EM   G      +Y+  I+  
Sbjct: 369 GLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDAC 428

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+   W   K LL  M   GL PN V Y + +D  G+  ++++A++ L           R
Sbjct: 429 GKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLL-----------R 477

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M T GL P   + +S I A  +  +  EA AVL+ M   GL PD++ Y + + A  +  
Sbjct: 478 EMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGG 537

Query: 641 KFH 643
           ++ 
Sbjct: 538 RWK 540



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 218/469 (46%), Gaps = 19/469 (4%)

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---L 191
           N C+     ++A ++V  +    L     + YS  I A GR  +  EA  L +  R   +
Sbjct: 146 NSCAKAGQWEIAVSLVKEMATVGLAPDV-ISYSSAISACGRGGRWEEALELFEDMRTSGV 204

Query: 192 TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
            P  +TY + I+ACA     ++A++L+ K+   G   + I+YS VI +  +  +   +L 
Sbjct: 205 APDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIAL- 263

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L +E++  ++  +    N  I   AK G   +A+  L     VGL P   +Y++VI A
Sbjct: 264 -DLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDA 322

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
            S   R  EA  +  E+   GL P   +YN+ +    K G  K+A+ ++ EM  +GV   
Sbjct: 323 CSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQR 382

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y+  I A A   +W+ A  +L+EM         F YS  +        W +  ++L+
Sbjct: 383 VIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLR 442

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM + G+ P+   YN  ID  G+ +    A+     M + G+ PD  ++++ I    K  
Sbjct: 443 EMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGD 502

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           ++  A  + +EM   G  P    YN  I+   +  RW+    LLG MRA GL PN+++Y+
Sbjct: 503 QWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYS 562

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +D   + G++ + I  LE            MR  G+ P  +  ++L+
Sbjct: 563 SAIDACVRGGQWKEGIALLE-----------EMRGSGVVPDVITYHALM 600



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 14/433 (3%)

Query: 204 ARNDDLEKALNLMSKMRQ-DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           +R+ D  KAL  +  M++  G+  D  +Y + I +  R  + + ++  +L +E+  +   
Sbjct: 8   SRSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAV--RLLREMPTEGAA 65

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D    + VI   AK G    A+ FL      G++P   +Y A I A +  GR   A  +
Sbjct: 66  PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
             E+    + P    YN+ +    K G  + A  +V EM   G+ PD  +YS  I A   
Sbjct: 126 LREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR 185

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            GRWE A  + ++M  S   P+   Y   +A   + G W+    +L+++ + G+ P+   
Sbjct: 186 GGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVIS 245

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +I    K      A+     M +  + P+ IT+N  ID   K GR+  A +L  EM 
Sbjct: 246 YSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMP 305

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   +Y+ +I+   + +RW++   +L  M   GL PN ++Y + +D   + G++ 
Sbjct: 306 TVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWK 365

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A    +GL        R M T G+    +  NS I A  + ++  EA A+L+ M   GL
Sbjct: 366 EA----KGL-------LREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGL 414

Query: 623 KPDVVTYTTLMKA 635
              V +Y++ + A
Sbjct: 415 HTTVFSYSSAIDA 427



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 29/343 (8%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL--------YSILIHALGRSEKLYEAF 183
           L  N+ + N++ID       W +  +L      +        YS +I A  + ++  EA 
Sbjct: 274 LAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAI 333

Query: 184 LLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
            + +      L+P  ++YN+ I ACA+    ++A  L+ +M   G     I Y+  I + 
Sbjct: 334 DILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAAC 393

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS-------KAMRFLGMA 291
            +  +         +KE      E+    L+  +  ++ A DA        KA   L   
Sbjct: 394 AKGEQ---------WKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREM 444

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
             VGL+P    Y + I A     +  EA  +  E+   GL P   +Y++ +    K    
Sbjct: 445 ATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQW 504

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           K+A  V+ EM  +G+ PD   Y+  IDA +  GRW+ A  +L EM  +   PN   YS  
Sbjct: 505 KEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSA 564

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +      G+W+    +L+EM+ SGV PD   Y+ ++ T  KY+
Sbjct: 565 IDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTCAKYD 607


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 230/493 (46%), Gaps = 32/493 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR----LTPLTY--NALISACARNDDLEKALNLMSKM 219
           ++ L+ A+ +    ++A +   +Q     L+P TY  + LI+   +   ++   ++++K+
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G     + ++ +I  L +  K   ++  +L+ ++     + D      +I G  K G
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAV--ELFDDMVARGYQPDVHTYTTIINGLCKIG 241

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +   A          G  P   TY+ +I +L    R  EA  +F  +K  G+ P    YN
Sbjct: 242 ETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYN 301

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G       ++A  +++EM    ++P+  T+SLLI+ +   G    AR VLK M   
Sbjct: 302 SLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM 361

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +PN   YS ++ GY  + E     ++   M + G +PD   YN++I+ + K   +  A
Sbjct: 362 GVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+ M+ +G+ PD +++NTLID   + GR   A +LF+ M   G  P   TY+I+++ 
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
             +Q       RL   M++  L PN+V Y  L+D   +S    +A +             
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 541

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EGL D+A+ AFR M  DG  P+  + N +I  F + + ++ A  ++ 
Sbjct: 542 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 601

Query: 616 YMKENGLKPDVVT 628
            M+E G   DV T
Sbjct: 602 EMREKGFVADVAT 614



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 215/462 (46%), Gaps = 18/462 (3%)

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSL 238
           Y   +L ++ R   + +N L+SA  +      A+  +SK M   G   D     ++I   
Sbjct: 108 YFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCF 167

Query: 239 TRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            +  ++D   S+L K+ K      ++L     N +I G  K G   +A+         G 
Sbjct: 168 FQLQRVDLGFSVLAKIIKL----GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGY 223

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   TY  +I  L   G T+ A  +F ++ E+G +P    Y+ ++    K   + +A  
Sbjct: 224 QPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 283

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + S M+  G+ P+  TY+ LI    N  RW  A  +L EM   +  PN   +S ++  + 
Sbjct: 284 IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 343

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G       VLK M   GVEP+   Y+ +++ +     +  A   FD M+++G +PD  
Sbjct: 344 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVF 403

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           ++N LI+ + K  R   A++LF EM  +G  P   +YN +I+ L +  R  +   L  NM
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
              G LP++ TY+ L+D +           C +G   +A   FR M++  LKP+ +  N 
Sbjct: 464 LTNGNLPDLCTYSILLDGF-----------CKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           LI+A  + +   EA  +   +   GL+P+V  YTT++  L +
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCK 554



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 29/369 (7%)

Query: 311 SNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS-EMERSGVLP 368
           ++S R I+ A A F  +     +P    +N LL   VKM +  DA   +S +ME +G+ P
Sbjct: 96  ASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSP 155

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D +T  +LI+ +    R +    VL ++     +     ++ ++ G    G++ +  ++ 
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELF 215

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M + G +PD H Y  +I+   K      A   F +M   G +PD +T++T+ID   K 
Sbjct: 216 DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKD 275

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            R + A ++F  M+ +G  P   TYN +I  L    RW +   +L  M +  ++PN+VT+
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FRVMRT 584
           + L++I+ + G   +A   L+ +++  V                          F VM T
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT 395

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF-- 642
            G KP   + N LIN + + +R  EA  +   M   GL PD+V+Y TL+  L ++ +   
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455

Query: 643 -HKVFSSYL 650
            H +F + L
Sbjct: 456 AHDLFKNML 464



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 154/352 (43%), Gaps = 11/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLSP T T   +I       R     +V  ++ + GL+     +N L+ G  K+G    A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  +M   G  PD HTY+ +I+     G   +A  + ++M  +  +P+   YS I+  
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                       +   MK+ G+ P+   YN +I     ++    A A  + M+S  I P+
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T++ LI+   K G    A  + + M E G  P   TY+ ++N    Q    + ++L  
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFD 391

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  P+V +Y  L++ Y ++ R  +A +            F  M   GL P  ++ 
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQ-----------LFNEMIHQGLTPDIVSY 440

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N+LI+   +  R  EA  + + M  NG  PD+ TY+ L+    +     K F
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/568 (26%), Positives = 269/568 (47%), Gaps = 43/568 (7%)

Query: 99  SASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL 158
           S++ LAS P+ L+  +  L    RA   P   SLLK L   +   + A A+V W++    
Sbjct: 93  SSTPLASLPAFLSSRKDDL---LRAADVP---SLLKAL-ELSGHWEWALALVRWVRAEGG 145

Query: 159 CYSYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLT-------YNALISACARNDDL 209
                 L  +++  L R E  ++A   LL +   L P +       Y  ++ A +     
Sbjct: 146 AADAAAL-EMVVRTLAR-EGQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRY 203

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+AL L ++++++G     + Y++++    R  +    ++  L +E+    +E DG   +
Sbjct: 204 ERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAML-EEMRAAGVEPDGFTAS 262

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            VI    + G   +A+ F    +  G  P   TY A++     +G  +EA  V +E++ES
Sbjct: 263 TVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEES 322

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP    YN L   Y + G+ ++A   +  M   G+LP+  TY+ ++ AY NAG+ + A
Sbjct: 323 GCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEA 382

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M+ +   P    Y+ IL     +  +    ++L EM  SG  P+   +N M+  
Sbjct: 383 LALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAV 442

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            GK     +     +RM S G+E    T+NTLI  + +CG    A ++++EM   G+ PC
Sbjct: 443 CGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPC 502

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD--DAI-- 565
            TTYN ++++L  Q  W   + ++  M+ +G  PN ++Y+ L+  + + G     +AI  
Sbjct: 503 LTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEK 562

Query: 566 ECLEG--------LSDQAVNAFRVMRTDGL------------KPSNLALNSLINAFGEDQ 605
           E  EG        L    ++ F+  R +G+            KP  +  NS+++ + ++ 
Sbjct: 563 EVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNG 622

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              +A  +   +K+ GL PD++TY ++M
Sbjct: 623 MYRKAGEMFDSIKQGGLSPDLITYNSMM 650



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/544 (21%), Positives = 237/544 (43%), Gaps = 67/544 (12%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMS 217
           ++Y++++     +GRS     A L   R   + P   T + +I+AC R+  +++A+    
Sbjct: 223 VMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFE 282

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            ++  G+    + Y+ ++Q   +      +L  ++ KE+E    + D    N++   +A+
Sbjct: 283 DLKSRGHVPCVVTYNALLQVFGKAGNYMEAL--RVLKEMEESGCKPDAVTYNELAGSYAR 340

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A + L      G+ P   TY  ++TA  N+G+  EA A+F+ +K++G  P    
Sbjct: 341 AGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNT 400

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN +L    K         ++ EM RSG  P+  T++ ++      G       VL+ M+
Sbjct: 401 YNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMK 460

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +     ++ +++ Y   G     F++  EM ++G  P    YN ++    +     
Sbjct: 461 SCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWT 520

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCH-------------------------------- 485
            A +  ++M +EG +P+ ++++ L+ CH                                
Sbjct: 521 AAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLV 580

Query: 486 ---FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              FKC R +  E  F+E+  RG+ P    +N M+++  +   +     +  +++  GL 
Sbjct: 581 ISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLS 640

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNA 578
           P+++TY +++D+Y +S    +A +                        C +GL  +A   
Sbjct: 641 PDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRI 700

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M  DG++P  +  ++L+  +   +  +EA  V+ YM +  L P  +TY  ++ +  +
Sbjct: 701 LSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCK 760

Query: 639 VDKF 642
             +F
Sbjct: 761 AKRF 764



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/404 (23%), Positives = 186/404 (46%), Gaps = 7/404 (1%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A G + K+ EA  L    ++    P   TYN ++    +       L ++ +M 
Sbjct: 366 YNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS 425

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + ++ ++ ++     ++  + + L +   C  +EL     N +I  + + G 
Sbjct: 426 RSGCTPNRVTWNTML-AVCGKRGMEGYVTRVLERMKSCG-VELCRDTFNTLISAYGRCGS 483

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A +        G +P   TY A+++ LS  G    A+++  ++K  G KP   +Y+ 
Sbjct: 484 RANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSL 543

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+ + K G     E +  E+    V P       L+ +     R E      +E+    
Sbjct: 544 LLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARG 603

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  I++ +L+ Y   G +++  ++   +K  G+ PD   YN M+D + K N    A 
Sbjct: 604 HKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAE 663

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               R+ +  ++PD +++NT+++   K G    A+ +  EM   G  PC  TY+ ++   
Sbjct: 664 KILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGY 723

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             +E + + + ++  M  + L P  +TY  +VD Y ++ RFD+A
Sbjct: 724 ASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEA 767



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 12/237 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN-CLHHAMAAFDRM 466
           Y+ +L      G ++R  ++  E+K  GV P    YNVM+D +G+        +A  + M
Sbjct: 190 YTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEM 249

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            + G+EPD  T +T+I    + G  D A   FE+++ RG+ PC  TYN ++ + G+   +
Sbjct: 250 RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNY 309

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            +  R+L  M   G  P+ VTY  L   Y ++G +++A +CL+            M + G
Sbjct: 310 MEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLD-----------TMVSKG 358

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           + P+    N+++ A+G   +  EA A+  +MK+NG  P V TY  ++  L +  +F+
Sbjct: 359 ILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFN 415



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 203/442 (45%), Gaps = 19/442 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN +++A      +++AL L   M+++G+      Y+L++  L + ++ +  ++ ++ 
Sbjct: 364 FTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFN--VMLEML 421

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+       +    N ++    K G      R L   +  G+     T+  +I+A    
Sbjct: 422 GEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRC 481

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +++E+  +G  P    YNALL    + G    A+ ++++M+  G  P++ +Y
Sbjct: 482 GSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSY 541

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY-SRILAGYRDRG--EWQRTFQVLKE 430
           SLL+  +A  G       + KE+      P+  I  + +++ ++ R     +R FQ   E
Sbjct: 542 SLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQ---E 598

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           + + G +PD   +N M+  + K      A   FD +   G+ PD IT+N+++D + K   
Sbjct: 599 VMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNE 658

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              AE++ + ++     P   +YN ++N   +Q   ++ +R+L  M A G+ P VVTY T
Sbjct: 659 SWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHT 718

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           LV  Y     F +A E         V ++ + R   L P  L    +++++ + +R  EA
Sbjct: 719 LVGGYASREMFSEARE---------VVSYMIQRN--LSPMELTYRRVVDSYCKAKRFDEA 767

Query: 611 FAVLQYMKENGLKPDVVTYTTL 632
              L  + E     D    +TL
Sbjct: 768 RGFLYEIAETDRNSDQKLLSTL 789



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-----SEGIEP 473
           G W+    +++ +++ G   D     +++ T  +           D ML     S G+  
Sbjct: 128 GHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQHDAVCDLLDEMLPLPPGSPGL-- 185

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRL 532
           D   + T++      GRY+RA ELF E++  G  P    YN+M+++ G   R W  +  +
Sbjct: 186 DVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAM 245

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  MRA G+ P+  T +T++   G+           +GL D+AV  F  +++ G  P  +
Sbjct: 246 LEEMRAAGVEPDGFTASTVIAACGR-----------DGLVDEAVAFFEDLKSRGHVPCVV 294

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             N+L+  FG+     EA  VL+ M+E+G KPD VTY  L  +  R
Sbjct: 295 TYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYAR 340



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 77/306 (25%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMR 220
           ++ LI A GR      AF +         TP   TYNAL+S  +R  D   A ++++KM+
Sbjct: 471 FNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMK 530

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI--------------------ECDK 260
            +G+  + ++YSL++Q   +    +++ ++ + KE+                    +C +
Sbjct: 531 NEGFKPNDMSYSLLLQCHAKGG--NAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRR 588

Query: 261 IE---------------LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
           +E                D  + N ++  +AK G   KA       +  GLSP   TY +
Sbjct: 589 LEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNS 648

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++   + S  + EAE + + LK S LKP   +YN ++ G+ K G +K+A+ ++SEM   G
Sbjct: 649 MMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADG 708

Query: 366 VLPD-----------------------------------EHTYSLLIDAYANAGRWESAR 390
           V P                                    E TY  ++D+Y  A R++ AR
Sbjct: 709 VRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEAR 768

Query: 391 IVLKEM 396
             L E+
Sbjct: 769 GFLYEI 774


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 211/452 (46%), Gaps = 14/452 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY   I    R+  +++A  +M +M  DG   D + Y+++I +L    K+D ++   L+ 
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC--LFT 323

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++    + D      ++  F+  G   K  +     +  G +P   T+  ++ AL  +G
Sbjct: 324 KMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  + + +++ G+ P    YN L+ G ++   L DA  + S ME  GV P  +TY 
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           LLID +  +G    A    ++M+     PN    +  L    + G       +  E+KSS
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD+  YN+M+  + K   +  A+     M     EPD I  N+LID  +K GR + A
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ++F  M+E    P   TYNI++  LG++ + +   +L  +M   G  PN +T+ TL+D 
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C     D A+  F  M T   +P  L  N++I+ F +  +   A  + 
Sbjct: 624 L-----------CKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             MK+  L+PD VT  TL+  +I+  +    F
Sbjct: 673 HQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAF 703



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 214/472 (45%), Gaps = 15/472 (3%)

Query: 175 RSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           R E +   F L QRQ  R    TY  +  +      L +A + + KMR+ G+  +  +Y+
Sbjct: 139 RVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L ++     +L  ++Y+ +  + ++   +  + ++V   K  +    M  L   +
Sbjct: 199 GLIHFLLQSGFCKEAL--EVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
            +GL P   TY   I  L   G+  EA  + + + + G  P    Y  L+        L 
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLD 316

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  + ++M+ S   PD+ TY  L+D +++ G  +    +  EME     P+   ++ ++
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G     F +L  M+  GV P+ H YN +I    + N L  A+  F  M S G+E
Sbjct: 377 NALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P   T+  LID H K G   +A E FE+M+ RG  P     N  +  L E  R  + K +
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAM 496

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              +++ GL P+ VTY  ++  Y + G+ D+AI+ L  +S               +P  +
Sbjct: 497 FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC-----------EPDVI 545

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +NSLI+   +  R  EA+ +   M+E  L P VVTY  L+  L +  +  K
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 243/561 (43%), Gaps = 57/561 (10%)

Query: 115  FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL- 173
            F   +S    P  + ++++    S    +D A  ++S + K   C    ++ + LI  L 
Sbjct: 497  FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ-CEPDVIVINSLIDTLY 555

Query: 174  --GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
              GR E+ ++ F   +   L P  +TYN L++   +   ++KA+ L   M   G   + I
Sbjct: 556  KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615

Query: 230  NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
             ++ ++  L + +++D +L  K++ ++       D    N +I GF K      A+    
Sbjct: 616  TFNTLLDCLCKNDEVDLAL--KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673

Query: 290  MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL---------------KESGLKPR 334
              + + L P   T   ++  +  SG+  +A  + E+                   G+   
Sbjct: 674  QMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTE 732

Query: 335  TKAYNALLKG--YVKMGYLKDAEFVV-----------SEMERS---------GVLPDEHT 372
                 A+L G   V     KD   ++           + + R+         GV P    
Sbjct: 733  AGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV 792

Query: 373  YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            Y+LLID +      E A  + +EM+ +   P++F Y+ ++  +   G+    F +  EM 
Sbjct: 793  YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEML 852

Query: 433  SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            + G +P+T  YN++I    K N L  AM  +  ++S    P   T+  LID   K GR D
Sbjct: 853  TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLD 912

Query: 493  RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             A E+F+ M   G  P +  YNI++N  G+    +        M  +G+ P++ +YT LV
Sbjct: 913  DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILV 972

Query: 553  DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            DI   +GR DDA+   E L           +  GL P  +A N +IN  G  QR  EA +
Sbjct: 973  DILCIAGRVDDALHYFEKL-----------KQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 613  VLQYMKENGLKPDVVTYTTLM 633
            +   M+  G+ PD+ TY +L+
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLI 1042



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/564 (23%), Positives = 243/564 (43%), Gaps = 86/564 (15%)

Query: 143  IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYN 197
            ++ A+ +   +++ NL  +  + Y+IL+  LG+  ++ +A  L +       +P  +T+N
Sbjct: 560  VEEAWQMFCRMEEMNLAPTV-VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618

Query: 198  ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-----LQKL 252
             L+    +ND+++ AL +  KM       D + ++ +I    + N+I +++     ++KL
Sbjct: 619  TLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL 678

Query: 253  YKE------------IECDKIE----------------LDGQLLNDVIVGFAKAGDASKA 284
             +             I+  +IE                +D     DV+ G        KA
Sbjct: 679  LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKA 738

Query: 285  MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLK 343
            + F        +    +    +I  L    +T  A  VF +  KE G+KP  K YN L+ 
Sbjct: 739  ILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLID 798

Query: 344  GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            G++++  ++ A  +  EM+ +G  PD  TY+ LIDA+  +G+      +  EM     KP
Sbjct: 799  GFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKP 858

Query: 404  NSFIYSRILA-----------------------------------GYRDRGEWQRTFQVL 428
            N+  Y+ +++                                   G    G      ++ 
Sbjct: 859  NTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF 918

Query: 429  KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
              M   G  P++  YN++++ +GK   +  A   F RM+ EGI PD  ++  L+D     
Sbjct: 919  DGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIA 978

Query: 489  GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            GR D A   FE++++ G  P    YN+MIN LG  +R E+   L   M+ +G++P++ TY
Sbjct: 979  GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038

Query: 549  TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             +L+   G           + G+ ++A   +  ++  GLKP+    N+LI  +       
Sbjct: 1039 NSLILNLG-----------IVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSE 1087

Query: 609  EAFAVLQYMKENGLKPDVVTYTTL 632
             A+ + + M   G  P+  T+  L
Sbjct: 1088 LAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 257/599 (42%), Gaps = 74/599 (12%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           ES    P    +++   +   +  ID AY ++  +     C    + Y++LI AL  + K
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG-CGPDVVTYTVLIDALCTARK 314

Query: 179 LYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           L +A  L     S   +   +TY  L+   +    L+K   + ++M  DGY  D + +++
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 234 VIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           ++ +L +  +I+ +  LL  + K+     +  +    N +I G  +A     A+      
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQ----GVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           + +G+ P   TY  +I     SG   +A   FE++K  G+ P   A NA L    +MG L
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A+ + +E++ SG+ PD  TY++++  Y+  G+ + A  +L EM     +P+  + + +
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G  +  +Q+   M+   + P    YN+++   GK   +  A+  F+ M   G 
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+TIT+NTL+DC  K    D A ++F +M      P   T+N +I+   +Q + ++   
Sbjct: 611 SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 532 LLGNMRAQGLLPNVVTYTTLV-----------------DIYGQSGR-------------- 560
           L   M+ + L P+ VT  TL+                 D + Q G               
Sbjct: 671 LFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGI 729

Query: 561 -----------FDDAIECLEGLSDQAV------------------NAF-RVMRTDGLKPS 590
                      F + + C     D +V                  N F +  +  G+KP+
Sbjct: 730 LTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPT 789

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
               N LI+ F E      A+ + + MK  G  PD  TY +L+ A  +  K +++F  Y
Sbjct: 790 LKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLY 848



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 217/528 (41%), Gaps = 86/528 (16%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+  L++A  +   + +A +L+  MR+ G   +   Y+ +I  L R N++D +L   L+
Sbjct: 370 VTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL--DLF 427

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +E   +E        +I    K+G   KA+      +  G++P      A + +L+  
Sbjct: 428 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM 487

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA+A+F ELK SGL P +  YN ++K Y K+G + +A  ++SEM +    PD    
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LID    AGR E A  +   ME  +  P    Y+ +LAG    G+ Q+  Q+ + M  
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607

Query: 434 SGVEPDTHFYNVMIDT-----------------------------------FGKYNCLHH 458
            G  P+T  +N ++D                                    F K N + +
Sbjct: 608 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA----EELF---------------- 498
           A+  F +M  + + PD +T  TL+    K G+ + A    E+ F                
Sbjct: 668 AIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 499 ----------------EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ-GL 541
                           E +  R      +    +I +L + ++    + +      + G+
Sbjct: 727 GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P +  Y  L+D + +    +            A N F  M++ G  P     NSLI+A 
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVE-----------VAWNLFEEMKSAGCAPDTFTYNSLIDAH 835

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           G+  +  E F +   M   G KP+ +TY  ++  L++ ++  K    Y
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 167/387 (43%), Gaps = 60/387 (15%)

Query: 315 RTIEAEA-VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R +E  A VF+ ++   ++     Y  + K     G L+ A   + +M  +G + + ++Y
Sbjct: 138 RRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI     +G  + A  V + M     KP+   +S ++     R   +    +L+EM+S
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID---------- 483
            G+ P+ + Y + I   G+   +  A     RM  +G  PD +T+  LID          
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317

Query: 484 --CHFK-----------------------CGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             C F                        CG  D+ E+++ EM+  GY P   T+ I++N
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVN 377

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL---------- 568
            L +  R  +   LL  MR QG+LPN+ TY TL+    ++ R DDA++            
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437

Query: 569 --------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                          G   +A+  F  M+  G+ P+ +A N+ + +  E  R  EA A+ 
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
             +K +GL PD VTY  +MK   +V +
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQ 524



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 147/334 (44%), Gaps = 11/334 (3%)

Query: 266  QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
            ++ N +I GF +  +   A       +  G +P T TY ++I A   SG+  E   +++E
Sbjct: 791  KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDE 850

Query: 326  LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
            +   G KP T  YN ++   VK   L  A  +   +      P   T+  LID    +GR
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 386  WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             + A  +   M     +PNS IY+ ++ GY   G      +  K M   G+ PD   Y +
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970

Query: 446  MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            ++D       +  A+  F+++   G++PD + +N +I+   +  R + A  LF EMQ RG
Sbjct: 971  LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030

Query: 506  YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
              P   TYN +I  LG     E+  ++   ++  GL PNV TY  L+  Y  SG      
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN----- 1085

Query: 566  ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
                  S+ A   ++ M   G  P+      L N
Sbjct: 1086 ------SELAYGIYKKMMVGGCDPNTGTFAQLPN 1113


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 261/554 (47%), Gaps = 28/554 (5%)

Query: 101 SALASSPSSLNR--VEFKLAESYRAVPAPLWH---SLLKNLCSSNSSIDLAYAVVSWLQK 155
           S L S+ + +N+  V   L E  + +  P  H   S+L N     S + LA AV+  + K
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144

Query: 156 HNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
             L Y   ++  S L++    S+++ EA  L  +  +T      +T+N LI     ++  
Sbjct: 145 --LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            +A+ L+ +M   G   D + Y +V+  L +    D+ L   L  ++E  K+E    + N
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTDLAFNLLNKMEQGKLEPGVLIYN 260

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K      A+      +  G+ P   TY+++I+ L N GR  +A  +  ++ E 
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            + P    ++AL+  +VK G L +AE +  EM +  + P   TYS LI+ +    R + A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           + + + M   H  P+   Y+ ++ G+      +   +V +EM   G+  +T  YN++I  
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +      A   F  M+S+G+ P+ +T+NTL+D   K G+ ++A  +FE +Q     P 
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNIMI  + +  + ED   L  N+  +G+ P+VV Y T++  +           C +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF-----------CRK 549

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  ++A   F+ M+ DG  P++   N+LI A   D     +  +++ M+  G   D  T 
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609

Query: 630 TTLMKAL--IRVDK 641
             +   L   R+DK
Sbjct: 610 GLVTNMLHDGRLDK 623



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 218/460 (47%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + ++ L+SA A+ +  +  ++L  +M+  G   +   YS++I    R ++
Sbjct: 72  MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +L  L K+ K      I     LLN    G+  +   S+A+  +      G  P T 
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLN----GYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + +   G +P    Y  ++ G  K G    A  ++++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+  + P    Y+ +ID        + A  + KEME    +PN   YS +++   + G W
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++L +M    + PD   ++ +ID F K   L  A   +D M+   I+P  +T+++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+      R D A+++FE M  +  FP   TYN +I    + +R E+   +   M  +GL
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + N VTY  L+    Q+G      +C     D A   F+ M +DG+ P+ +  N+L++  
Sbjct: 428 VGNTVTYNILIQGLFQAG------DC-----DMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            ++ +  +A  V +Y++ + ++P + TY  +++ + +  K
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 203/449 (45%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A+ L  +M +       I +S ++ ++ + NK D  ++  L ++++   I  +    
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQNLGIPHNHYTY 119

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           + +I  F +      A+  LG    +G  P   T ++++    +S R  EA A+ +++  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G +P T  +N L+ G        +A  ++  M   G  PD  TY ++++     G  + 
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +ME    +P   IY+ I+ G            + KEM++ G+ P+   Y+ +I 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I PD  T++ LID   K G+   AE+L++EM +R   P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ +IN     +R ++ K++   M ++   P+VVTY TL+  + +  R ++ +E  
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME-- 417

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +  N LI    +      A  + + M  +G+ P+++T
Sbjct: 418 ---------VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y TL+  L +  K  K    + +    KM
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 245/525 (46%), Gaps = 27/525 (5%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG-CIPNVFSYNILLKGLCDENRSQEAL 182

Query: 184 LLSQRQRLTP----------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            L Q   + P          ++Y  +I+   +  DL+KA     +M   G   + + YS 
Sbjct: 183 ELLQ---MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I +L +   +D ++  ++   +  + +  + +  N ++ G+  +G   +A+ FL     
Sbjct: 240 IIAALCKAQAMDKAM--EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L +
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ P+ + +S+LI AYA  G+ + A +V  +M      P++  Y  ++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +   +  ++M    + P    YN +I +   ++    A      ML  GI  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DTI +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M + G+ P+ VTY TL++ Y +  R +DA+             FR M + G+ P  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALV-----------LFREMESSGVSPDIIT 586

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 233/529 (44%), Gaps = 21/529 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC + + +D A  V++ + K+ +  +    Y+ ++H    S +  EA    ++
Sbjct: 237 YSSIIAALCKAQA-MDKAMEVLTSMVKNGVMPNCRT-YNSIVHGYCSSGQPKEAIGFLKK 294

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q       
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L   +  + I  +  + + +I  +AK G   +AM      +  GL+P T TY
Sbjct: 355 LVE--MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L  SGR  +A   FE++ +  L P    YN+L+           A+ ++ EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+  D   ++ +ID++   GR   +  +   M     KP+   YS ++ GY   G+   
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M S G++PD   YN +I+ + K + +  A+  F  M S G+ PD IT+N ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             F+  R   A+EL+  + E G     +TYNI+++ L +    ++  R+  N+    L  
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              T+  ++    + GR           +D+A + F  +  +GL P     + +     E
Sbjct: 653 ETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
                E   +   M+ENG   +     ++++ L++     +   +YLF 
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLFM 749



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 16/199 (8%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P+  T+  LI      GR D        + ++G+      +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +PNV +Y  L+       R  +A+E L+ + D 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             +           P  ++  ++IN F ++    +A+     M + G+ P+VVTY++++ 
Sbjct: 192 GGDC---------PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 635 ALIR---VDKFHKVFSSYL 650
           AL +   +DK  +V +S +
Sbjct: 243 ALCKAQAMDKAMEVLTSMV 261



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 42/227 (18%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +  ++ +A +L +      ++P  +TYN ++    +      A  L   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y++++  L + N  D +L  ++++ +    ++L+ +  N +I    K G 
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEAL--RMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY+ +   L   G   E + +F  ++E+G    ++  N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +++  ++ G +  A   +  ++      +  T SL +D  +  G+++
Sbjct: 730 IVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS-GGKYQ 775


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 252/524 (48%), Gaps = 27/524 (5%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           R +P  L+    ++K LC+ N  +D A +V+  + KH  C    ++Y  LIH+L +  ++
Sbjct: 205 RKIPPTLFTFGVVMKALCAVNE-VDSALSVLRDMTKHG-CVPNSVIYQTLIHSLSKCNRV 262

Query: 180 YEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            EA  L +   L        T+N +I    + D + +A  ++++M   G+  D I Y  +
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQG 293
           +  L +  ++D++  + L+  I     +    + N +I GF   G    A   L  M   
Sbjct: 323 MNGLCKIGRVDAA--KDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 376

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY ++I      G    A  V  +++  G KP   +Y  L+ G+ K+G + +
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +++EM   G+ P+   ++ LI A+    R   A  + +EM     KP+ + ++ +++
Sbjct: 437 AYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 496

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G  +  E +    +L++M S GV  +T  YN +I+ F +   +  A    + M+ +G   
Sbjct: 497 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL 556

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D IT+N+LI    + G  D+A  LFE+M   G  P + + NI+IN L      E+     
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  +G  P++VT+ +L++   ++GR +D +             FR ++ +G+ P  + 
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL-----------TMFRKLQAEGIPPDTVT 665

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            N+L++   +     +A  +L    E+G  P+  T++ L+++L+
Sbjct: 666 YNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 236/486 (48%), Gaps = 23/486 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           SY ++  IL+   G   K+       +LS++   T  T+  ++ A    ++++ AL+++ 
Sbjct: 178 SYNVVLEILVS--GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLR 235

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y  +I SL++ N+++ +L  +L +E+       D +  NDVI+G  K
Sbjct: 236 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL--QLLEEMFLMGCVPDAETFNDVILGLCK 293

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
               ++A + +      G +P   TY  ++  L   GR   A+ +F  +     KP +  
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVI 349

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +N L+ G+V  G L DA+ V+S+M  S G++PD  TY+ LI  Y   G    A  VL++M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                KPN + Y+ ++ G+   G+    + +L EM + G++P+T  +N +I  F K + +
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  F  M  +G +PD  T+N+LI    +      A  L  +M   G    T TYN +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN    +   ++ ++L+  M  QG L + +TY +L+              C  G  D+A 
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL-----------CRAGEVDKAR 578

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + F  M  DGL PS+++ N LIN         EA    + M   G  PD+VT+ +L+  L
Sbjct: 579 SLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638

Query: 637 IRVDKF 642
            R  + 
Sbjct: 639 CRAGRI 644



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 180/399 (45%), Gaps = 31/399 (7%)

Query: 271 VIVG-FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           V++G     G+     R L   +  G+  K + + +++     +G   +   +  E++  
Sbjct: 110 VLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 169

Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
              +P  K+YN +L+  V     K A  V  +M    + P   T+ +++ A       +S
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  VL++M      PNS IY  ++             Q+L+EM   G  PD   +N +I 
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K++ ++ A    +RML  G  PD IT+  L++   K GR D A++LF  + +    P
Sbjct: 290 GLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 345

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
            +  +N +I+      R +D K +L +M  + G++P+V TY +L+  Y + G    A+E 
Sbjct: 346 TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEV 405

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C  G  D+A N    M  DGLKP+ +  N LI+AF +
Sbjct: 406 LRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCK 465

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           + R  EA  + + M   G KPDV T+ +L+  L  VD+ 
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 504



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 200/443 (45%), Gaps = 26/443 (5%)

Query: 215 LMSKMRQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           LM +MR + Y C+  F +Y++V++ L   N     +   ++ ++   KI         V+
Sbjct: 162 LMLEMR-NVYSCEPTFKSYNVVLEILVSGNC--HKVAANVFYDMLSRKIPPTLFTFGVVM 218

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
                  +   A+  L      G  P +  Y  +I +LS   R  EA  + EE+   G  
Sbjct: 219 KALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 278

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  + +N ++ G  K   + +A  +V+ M   G  PD+ TY  L++     GR ++A   
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA--- 335

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFG 451
            K++     KP S I++ ++ G+   G       VL +M +S G+ PD   YN +I  + 
Sbjct: 336 -KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 394

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A+     M ++G +P+  ++  L+D   K G+ D A  L  EM   G  P T 
Sbjct: 395 KKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTV 454

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-DAIECLEG 570
            +N +I+   ++ R  +   +   M  +G  P+V T+ +L+     SG  + D I+    
Sbjct: 455 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI-----SGLCEVDEIK---- 505

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
               A+   R M ++G+  + +  N+LINAF       EA  ++  M   G   D +TY 
Sbjct: 506 ---HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYN 562

Query: 631 TLMKALIR---VDKFHKVFSSYL 650
           +L+K L R   VDK   +F   L
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKML 585



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 2/330 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN+LI    +   +  AL ++  MR  G   +  +Y++++    +  KID +    L  
Sbjct: 385 TYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA--YNLLN 442

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+  D ++ +    N +I  F K     +A+         G  P   T+ ++I+ L    
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  ++   G+   T  YN L+  +++ G +K+A  +V+EM   G L DE TY+
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYN 562

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI     AG  + AR + ++M      P+S   + ++ G    G  +   +  KEM   
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLR 622

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD   +N +I+   +   +   +  F ++ +EGI PDT+T+NTL+    K G    A
Sbjct: 623 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQE 524
             L +E  E G+ P   T++I++  L  QE
Sbjct: 683 CLLLDEGIEDGFVPNDRTWSILLQSLVPQE 712



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 15/347 (4%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  +I  L ++G     + +  ++K+ G+  +   + ++++ Y K G+      ++ EM
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 166

Query: 362 ERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
                  P   +Y+++++   +    + A  V  +M      P  F +  ++       E
Sbjct: 167 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNE 226

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 VL++M   G  P++  Y  +I +  K N ++ A+   + M   G  PD  T+N 
Sbjct: 227 VDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 286

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K  R + A ++   M  RG+ P   TY  ++N L +  R +  K L   +    
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 344

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
             P  V + TL+  +   GR DDA   L   SD   +        G+ P     NSLI  
Sbjct: 345 --PTSVIFNTLIHGFVTHGRLDDAKAVL---SDMVTSY-------GIVPDVCTYNSLIYG 392

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + +      A  VL+ M+  G KP+V +YT L+    ++ K  + ++
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 439


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 235/497 (47%), Gaps = 48/497 (9%)

Query: 166 YSILIHAL-GRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKM 219
           Y+IL+ AL GR  +  EA  + +  R        +TYN L++A  R  ++++A  L+  M
Sbjct: 160 YNILVRALCGRGHR-KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM 218

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+ G   + + ++ V+  + +  +++ +  +K++ E+  + +  DG   N ++ G+ K G
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDA--RKVFDEMVKEGLAPDGVSYNTLVGGYCKVG 276

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
            + +A+         G+ P   T+ ++I  +  +G    A  +  E++E GL+     + 
Sbjct: 277 CSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFT 336

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ G+ K G+L DA   V EM +  + P    Y+ LI+ Y   GR + AR +++EME  
Sbjct: 337 ALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   YS IL+ Y   G+    FQ+ ++M  +GV PD   Y+ +I    +   L  A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M+S G++PD +T+ +LID H K G  +RA  L +EM + G  P   TY+++IN 
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV--------------------------- 552
           L +  R ++ +RLL  +  +  +P  + Y  L+                           
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576

Query: 553 -----DIYGQSGRFDDAI-------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
                 I  ++   D ++        C EG   +A++  + M   G  P++ +  SLI  
Sbjct: 577 DKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636

Query: 601 FGEDQRDAEAFAVLQYM 617
             E     EA  V+Q +
Sbjct: 637 LFEKGMVVEADQVIQQL 653



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 220/443 (49%), Gaps = 16/443 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT-RTNKIDSSLLQKL 252
           L YNA++ A + +  L  A      M  DG   +   Y++++++L  R ++ ++  + + 
Sbjct: 124 LAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRD 182

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +   CD    +    N ++  F +AG+  +A R + M +  GL P   T+ +V+  +  
Sbjct: 183 MRGAGCDP---NAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR  +A  VF+E+ + GL P   +YN L+ GY K+G   +A  V +EM R G++PD  T
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ LI     AG  E A  +++EM     + N   ++ ++ G+  +G        ++EM+
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              ++P    YN +I+ +     +  A      M ++G++PD +T++T++  + K G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +L ++M E G  P   TY+ +I +L E++R  D   L  NM + GL P+ VTYT+L+
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D + + G  + A+     L D+ V A       G+ P  +  + LIN   +  R  EA  
Sbjct: 480 DGHCKEGNVERALS----LHDEMVKA-------GVLPDVVTYSVLINGLSKSARTKEAQR 528

Query: 613 VLQYMKENGLKPDVVTYTTLMKA 635
           +L  +      P  + Y  LM+ 
Sbjct: 529 LLFKLYHEEPVPANIKYDALMRC 551



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 178/363 (49%), Gaps = 15/363 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P    Y AV+ ALS++     A   F+ +   G+ P    YN L++     G+ K+A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             V+ +M  +G  P+  TY+ L+ A+  AG  + A  ++  M     KPN   ++ ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G  +   +V  EM   G+ PD   YN ++  + K  C H A++ F  M  +GI PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+ +LI    K G  +RA  L  EM+ERG      T+  +I+   ++   +D    + 
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            MR   + P+VV Y  L++ Y   GR D+A E +           R M   G+KP  +  
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELV-----------REMEAKGVKPDVVTY 405

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYLF 651
           +++++A+ ++     AF + Q M ENG+ PD +TY++L++ L    R+   H +F + + 
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465

Query: 652 FNI 654
             +
Sbjct: 466 LGL 468



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 201/435 (46%), Gaps = 20/435 (4%)

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           GY    + Y+ V+ +L+     D+SL   ++ +  +  D +  +    N ++      G 
Sbjct: 118 GYAPSVLAYNAVLLALS-----DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGH 172

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +G G  P   TY  ++ A   +G    AE + + ++E GLKP    +N+
Sbjct: 173 RKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNS 232

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G ++DA  V  EM + G+ PD  +Y+ L+  Y   G    A  V  EM    
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++      G  +R   +++EM+  G++ +   +  +ID F K   L  A+
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            A   M    I+P  + +N LI+ +   GR D A EL  EM+ +G  P   TY+ +++  
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +        +L   M   G+LP+ +TY++L+ +  +  R  DA              F+
Sbjct: 413 CKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHV-----------LFK 461

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M + GL+P  +   SLI+   ++     A ++   M + G+ PDVVTY+ L+  L +  
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 641 KFHKVFSSYLFFNIY 655
           +  +  +  L F +Y
Sbjct: 522 RTKE--AQRLLFKLY 534



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/511 (21%), Positives = 211/511 (41%), Gaps = 52/511 (10%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYEAF 183
           A  +++L+   C +   +D A  +V  +++  L  +     S++  I   GR E   + F
Sbjct: 192 AVTYNTLVAAFCRA-GEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVF 250

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
               ++ L P  ++YN L+    +     +AL++ ++M + G   D + ++ +I  + + 
Sbjct: 251 DEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKA 310

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             ++ ++   L +E+    ++++      +I GF K G    A+  +   +   + P   
Sbjct: 311 GNLERAV--GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVV 368

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y A+I      GR  EA  +  E++  G+KP    Y+ +L  Y K G    A  +  +M
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +GVLPD  TYS LI       R   A ++ K M     +P+   Y+ ++ G+   G  
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +R   +  EM  +GV PD   Y+V+I+   K      A     ++  E   P  I ++ L
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548

Query: 482 IDCHFKC---------------GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           + C                   G  + A+++++ + +R +    + Y+++I+      R 
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIH---GHCRE 605

Query: 527 EDVKRLLG---NMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-------IECL-------- 568
            +V + L     M   G  PN  +  +L+    + G   +A       + C         
Sbjct: 606 GNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEAS 665

Query: 569 ---------EGLSDQAVNAFRVMRTDGLKPS 590
                    EG  D  ++    M  DGL PS
Sbjct: 666 KALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 224/490 (45%), Gaps = 18/490 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  + Q         T +TYN+LISA A+   LE+AL+L +
Sbjct: 299 KVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKT 358

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D   Y+ ++    +  K D ++  +++ E+     + +    N +I     
Sbjct: 359 QMVHKGIKPDVFTYTTLLSGFEKAGKDDFAI--QVFLEMRAVGCKPNICTFNALIKMHGN 416

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M+     +    SP   T+  ++     +G   +   +F+E+K +G       
Sbjct: 417 RGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDT 476

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G    A  V   M  +GV+PD  TY+ ++ A A  G WE +  VL EME
Sbjct: 477 FNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEME 536

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   YS +L  Y +  E +R     +E+ S  VE        ++    K + L 
Sbjct: 537 DGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLI 596

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF  +   GI PD  T N ++  + +     +A E+   M E  + P  TTYN ++
Sbjct: 597 ETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLM 656

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +    E ++  + +L  +  +G+ P+ ++Y T++  Y ++GR  +A      + D A  
Sbjct: 657 YMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSA-- 714

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                    L P  +  N+ I  +  D   AEA  V++YM + G KPD  TY +++    
Sbjct: 715 ---------LVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYC 765

Query: 638 RVDKFHKVFS 647
           ++D+ H+  S
Sbjct: 766 KLDQRHEANS 775



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 252/554 (45%), Gaps = 39/554 (7%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-----ILIHALGRSEKL 179
           PA     ++K L  SN   DLA AV  W++ +N   S   L+S     ++I  LG++ ++
Sbjct: 119 PASDILGIIKALGFSNKC-DLALAVFHWVRTNN---SNTNLFSSSAIPVIIKILGKAGRV 174

Query: 180 YEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
             A  L    +     +    Y  LI+A + +     A+NL +KM+QDG +   I Y++V
Sbjct: 175 SSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVV 234

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +    +   +  S +  L + +    +  D    N +I    +     +A+      +  
Sbjct: 235 LNVYGKMG-MPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLE 293

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P   TY A++     S R  EA  V +E++ +G  P +  YN+L+  Y K G L++A
Sbjct: 294 GFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEA 353

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + ++M   G+ PD  TY+ L+  +  AG+ + A  V  EM     KPN   ++ ++  
Sbjct: 354 LDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKM 413

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           + +RG++    +V  ++K     PD   +N ++  FG+          F  M   G   +
Sbjct: 414 HGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAE 473

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+NTLI  + +CG +D+A  +++ M E G  P  +TYN ++  L     WE  +++L 
Sbjct: 474 RDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLA 533

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQ---------------SGRFDDAIECLEGL------SD 573
            M      PN ++Y++L+  Y                 SG  +     L+ L      SD
Sbjct: 534 EMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSD 593

Query: 574 QAV---NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             +    AF  +R  G+ P    LN++++ +G  Q  A+A  +L +M E    P + TY 
Sbjct: 594 LLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYN 653

Query: 631 TLMKALIRVDKFHK 644
           +LM    R + F K
Sbjct: 654 SLMYMYSRSENFQK 667



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 12/345 (3%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L  +GR   A ++   L+  G+     AY  L+  Y   G  +DA  + ++M++ G
Sbjct: 164 IIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDG 223

Query: 366 VLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
             P   TY+++++ Y   G  W +   +++ M      P+ + Y+ +++  R    ++  
Sbjct: 224 CNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEA 283

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             + ++MK  G  PD   YN ++D FGK      AM     M + G  P ++T+N+LI  
Sbjct: 284 VHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISA 343

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G  + A +L  +M  +G  P   TY  +++   +  + +   ++   MRA G  PN
Sbjct: 344 YAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPN 403

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           + T+  L+ ++G  G+F + ++            F  ++     P  +  N+L+  FG++
Sbjct: 404 ICTFNALIKMHGNRGKFAEMMK-----------VFDDIKLCNCSPDIVTWNTLLAVFGQN 452

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             D++   + + MK  G   +  T+ TL+ A  R   F +  + Y
Sbjct: 453 GMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVY 497



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 10/311 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LISA +R    ++A+ +   M + G   D   Y+ V+ +L R    + S  +K+  
Sbjct: 476 TFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQS--EKVLA 533

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL---- 310
           E+E  + + +    + ++  +A   +  +   F   A+ +  S    T+A ++  L    
Sbjct: 534 EMEDGRCKPNELSYSSLLHAYANGKEIERMNAF---AEEI-YSGSVETHAVLLKTLVLVN 589

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           S S   IE E  F EL+  G+ P     NA+L  Y +   +  A  +++ M  +   P  
Sbjct: 590 SKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSL 649

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ L+  Y+ +  ++ +  +L+E+     KP+   Y+ ++  Y   G  +   ++  E
Sbjct: 650 TTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSE 709

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           MK S + PD   YN  I T+   +    A+     M+ +G +PD  T+N+++D + K  +
Sbjct: 710 MKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQ 769

Query: 491 YDRAEELFEEM 501
              A    + +
Sbjct: 770 RHEANSFVKNL 780



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/377 (20%), Positives = 155/377 (41%), Gaps = 37/377 (9%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+NALI          + + +   ++      D + ++ ++    + N +DS +   ++K
Sbjct: 406 TFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQ-NGMDSQV-SGIFK 463

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E++      +    N +I  +++ G   +AM         G+ P  +TY AV+ AL+  G
Sbjct: 464 EMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGG 523

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYV---------------------------- 346
              ++E V  E+++   KP   +Y++LL  Y                             
Sbjct: 524 LWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLK 583

Query: 347 -------KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
                  K   L + E    E+ R G+ PD  T + ++  Y        A  +L  M  +
Sbjct: 584 TLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHET 643

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   Y+ ++  Y     +Q++ ++L+E+   G++PD   YN +I  + +   +  A
Sbjct: 644 RFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEA 703

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M    + PD +T+NT I  +     +  A ++   M ++G  P   TYN +++ 
Sbjct: 704 SRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDW 763

Query: 520 LGEQERWEDVKRLLGNM 536
             + ++  +    + N+
Sbjct: 764 YCKLDQRHEANSFVKNL 780


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 257/547 (46%), Gaps = 26/547 (4%)

Query: 101 SALASSPSSLNR--VEFKLAESYRAVPAPLWH---SLLKNLCSSNSSIDLAYAVVSWLQK 155
           S L S+ + +N+  V   L E  + +  P  H   S+L N     S + LA AV+  + K
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMK 144

Query: 156 HNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDL 209
             L Y  +++  S L++     +++ EA  L  +      +   +T+N LI     ++  
Sbjct: 145 --LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 202

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            +A+ L+ +M   G   D   Y  V+  L +   ID +L   L K++E  KIE +  + N
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL--SLLKKMEKGKIEANVVIYN 260

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K      A       +  G+ P   TY ++I+ L N GR  +A  +  ++ E 
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIER 320

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            + P    +N+L+  + K G L +AE +  EM +  + P+  TY+ LI+ +    R + A
Sbjct: 321 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 380

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           + +   M      P+   Y+ ++ G+      +   ++ +EM   G+  +T  YN +I  
Sbjct: 381 QQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 440

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +      A   F +M+S+G+ PD IT++ L+D   K G+ ++A  +FE +Q+    P 
Sbjct: 441 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNIMI  + +  + ED   L  ++  +G+ PNV+ YTT++  +           C +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF-----------CRK 549

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           GL ++A   FR M+ DG  P +   N+LI A   D   A +  +++ M+  G   D  T 
Sbjct: 550 GLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 609

Query: 630 TTLMKAL 636
           + ++  L
Sbjct: 610 SMVINML 616



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 213/468 (45%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ L++   R   L  AL ++ KM + GY  D +  S ++       +I  ++   L  
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV--ALVD 175

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     + D    N +I G      AS+A+  +      G  P   TY  V+  L   G
Sbjct: 176 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++ +++++  ++     YN ++ G  K  ++ DA  + ++ME  G+ PD  TY+
Sbjct: 236 DIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 295

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    N GRW  A  +L +M      PN   ++ ++  +   G+     ++  EM   
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            ++P+   YN +I+ F  ++ L  A   F  M+S+   PD +T+NTLI    K  R +  
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF EM +RG    T TYN +I  L +    +  +++   M + G+ P+++TY+ L+D 
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475

Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
             + G+ + A+                         C  G  +   + F  +   G+KP+
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +   ++I+ F       EA A+ + MKE+G  PD   Y TL++A +R
Sbjct: 536 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 583



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A+ L  +M +       I +S ++ ++ + NK D  ++  L ++++   I  +    
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQNLGIPHNHYTY 119

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           + ++  F +      A+  LG    +G  P   T ++++    +  R  EA A+ +++ E
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G KP T  +N L+ G        +A  ++  M   G  PD  TY  +++     G  + 
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+ME    + N  IY+ I+ G          F +  +M++ G++PD   YN +I 
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I P+ +T+N+LID   K G+   AE+LF+EM +R   P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN +IN     +R ++ +++   M ++  LP+VVTY TL+  + ++ R ++ +E  
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME-- 417

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +  N+LI    +      A  + + M  +G+ PD++T
Sbjct: 418 ---------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 468

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y+ L+  L +  K  K    + +    KM
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKM 497


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 245/527 (46%), Gaps = 31/527 (5%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG-CIPNVFSYNILLKGLCDENRSQEAL 182

Query: 184 LLSQRQRLTP----------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            L Q   + P          ++Y  +I+   +  DL+KA     +M   G   + + YS 
Sbjct: 183 ELLQ---MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 234 VIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +I +L +   +D ++  L  + K    + +  + +  N ++ G+  +G   +A+ FL   
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVK----NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G+ P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +   ++  M R+G+ P+ + +S+LI AYA  G+ + A +V  +M      P++  Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G  +   +  ++M    + P    YN +I +   ++    A      ML  GI
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             DTI +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           LL +M + G+ P+ VTY TL++ Y +  R +DA+             FR M + G+ P  
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV-----------LFREMESSGVSPDI 584

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 234/532 (43%), Gaps = 27/532 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLL 185
           + S++  LC + + +D A  V++ + K+ +   C +Y    + ++H    S +  EA   
Sbjct: 237 YSSIIAALCKAQA-MDKAMEVLTSMVKNGVMPNCRTY----NSIVHGYCSSGQPKEAIGF 291

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            ++     + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q    
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              +    +  L   +  + I  +  + + +I  +AK G   +AM      +  GL+P T
Sbjct: 352 KGALVE--MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI  L  SGR  +A   FE++ +  L P    YN+L+           A+ ++ E
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+  D   ++ +ID++   GR   +  +   M     KP+   YS ++ GY   G+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M S G++PD   YN +I+ + K + +  A+  F  M S G+ PD IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++   F+  R   A+EL+  + E G     +TYNI+++ L +    ++  R+  N+    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L     T+  ++    + GR           +D+A + F  +  +GL P     + +   
Sbjct: 650 LQLETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
             E     E   +   M+ENG   +     ++++ L++     +   +YLF 
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLFM 749



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 14/282 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + YS LI     + K+ EA      ++S   +   +TYN LI+   +   +E AL L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I Y++++Q L +T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAA--KELYVGITESGTQLELSTYNIILHGLCKN 632

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F  L  +GL P  + Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG---RWESARIVLKE 395
           + + +  ++ G L++ + +   ME +G   +    + ++      G   R  +   ++ E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              S     + ++  +L+G    G++Q   + L E   S +E
Sbjct: 753 KHFSLEASTASLFLDLLSG----GKYQEYHRFLPEKYKSFIE 790



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 16/197 (8%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P+  T+  LI      GR D        + ++G+      +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +PNV +Y  L+       R  +A+E L+ + D 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             +           P  ++  ++IN F ++    +A+     M + G+ P+VVTY++++ 
Sbjct: 192 GGDC---------PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 635 ALIR---VDKFHKVFSS 648
           AL +   +DK  +V +S
Sbjct: 243 ALCKAQAMDKAMEVLTS 259



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + + +T L+       R  DA++ 
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG--LKPD 625
           +           R M   G  P+  + N L+    ++ R  EA  +LQ M ++G    PD
Sbjct: 149 V----------LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VV+YTT++    +     K + +Y
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTY 222


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 215/448 (47%), Gaps = 8/448 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN +I    +    ++A   +  M   G   + I ++++I  L R  ++  +   ++ 
Sbjct: 19  VTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKET--SEVL 76

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+       D    N ++ G+ K G+  +A+         GLSP   TY ++I ++  +
Sbjct: 77  VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A   F+++   GL P  + Y  ++ G+ + G L +A  V++EM RSG +P   TY
Sbjct: 137 GNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTY 196

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+ +   GR E A  +L++M      P+   YS I++G+    E  R FQ+  EM  
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             V PD   Y+ +I    +   L  A   F  ML+  + PD  T+ TLI+ + K G  ++
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L +EM ++G+ P   TYN++IN L +Q R ++ +RLL  +     +P+ VTY TL++
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376

Query: 554 IYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                  F  A+      C++GL D+A   F  M     KP+    N +I+         
Sbjct: 377 NCCNI-EFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVL 435

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +A+ + + M      P  VT   L+KAL
Sbjct: 436 KAYKLYKEMVHVDFVPHTVTVLALVKAL 463



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 174/390 (44%), Gaps = 11/390 (2%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           + +KE+E +    +    N +I G+ K     +A  FL      GL P   T+  +I  L
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR  E   V  E+   G  P    YN L+ GY K G    A  + +EM R+G+ P+ 
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI++   AG    A     +M V    PN   Y+ I+ G+  +G     ++VL E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M  SG  P    YN +I+       +  A+     M+ +G+ PD ++++T+I    +   
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            DRA ++  EM  +   P   TY+ +I  L EQ R  +   +   M    L P+  TYTT
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L++ Y           C EG  ++A++    M   G  P  +  N LIN   +  R  EA
Sbjct: 304 LINAY-----------CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
             +L  +  +   P  VTY TL++    ++
Sbjct: 353 RRLLLKLFYDDSIPSAVTYNTLIENCCNIE 382



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 156/353 (44%), Gaps = 11/353 (3%)

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
            +RF    +  G  P   TY  +I       RT EA      +   GL+P    +N ++ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  + G LK+   V+ EM R G +PDE TY+ L++ Y   G +  A ++  EM  +   P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++      G   R  +   +M   G+ P+   Y  +I+ F +   L  A    
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M   G  P  +T+N LI+ H   GR + A  L ++M  +G  P   +Y+ +I+     
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
           +  +   ++   M  + +LP+ VTY++L+    +  R             +A + F+ M 
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL-----------TEACDMFQEML 290

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           T  L P      +LINA+ ++    +A  +   M + G  PD VTY  L+  L
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 204/515 (39%), Gaps = 81/515 (15%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDL 209
           + N C    + Y+ +I    + ++  EAF   +   L  L     T+N +I+   R+  L
Sbjct: 10  ERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRL 69

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++   ++ +M + GY  D + Y+ ++    +      +L+  L+ E+  + +  +     
Sbjct: 70  KETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALV--LHAEMVRNGLSPNVVTYT 127

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I    KAG+ ++AM F       GL P   TY  +I   +  G   EA  V  E+  S
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P    YNAL+ G+  +G +++A  ++ +M   GVLPD  +YS +I  +A     + A
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  EM      P++  YS ++ G  ++        + +EM +  + PD   Y  +I+ 
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-------------------------- 483
           + K   L+ A+   D M+ +G  PD +T+N LI+                          
Sbjct: 308 YCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPS 367

Query: 484 -----------CHFK-----------C--GRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                      C+ +           C  G  D A+++FE M  + + P    YN++I+ 
Sbjct: 368 AVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG 427

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY---GQSGRFDDAIECL-------- 568
                      +L   M     +P+ VT   LV      G  G  ++ I  +        
Sbjct: 428 HCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTD 487

Query: 569 -------------EGLSDQAVNAFRVMRTDGLKPS 590
                        EG  D   N    M  DGL PS
Sbjct: 488 AELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPS 522



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 115/254 (45%), Gaps = 11/254 (4%)

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            KEME +   PN   Y+ ++ GY         F  L+ M   G+EP+   +N++I+   +
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              L         M  +G  PD +T+NTL++ + K G + +A  L  EM   G  P   T
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y  +IN + +             M  +GL PN  TYTT+++ + Q           +GL 
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ-----------QGLL 174

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+A      M   G  PS +  N+LIN      R  EA  +LQ M   G+ PDVV+Y+T+
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 633 MKALIRVDKFHKVF 646
           +    R  +  + F
Sbjct: 235 ISGFARNQELDRAF 248



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 180/444 (40%), Gaps = 59/444 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + SL+ ++C +  +++ A      +    LC + E  Y+ +I+   +   L EA+ +L++
Sbjct: 126 YTSLINSMCKA-GNLNRAMEFFDQMHVRGLCPN-ERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 188 RQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R    P  +TYNALI+       +E+A+ L+  M   G   D ++YS +I    R  +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   K         +E+ G+                             + P   TY
Sbjct: 244 LDRAFQMK---------VEMIGK----------------------------SVLPDAVTY 266

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I  L    R  EA  +F+E+    L P    Y  L+  Y K G L  A  +  EM +
Sbjct: 267 SSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQ 326

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL----------- 412
            G LPD  TY++LI+      R + AR +L ++    + P++  Y+ ++           
Sbjct: 327 KGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSA 386

Query: 413 ----AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
                G+  +G      QV + M +   +P+   YNV+I    +   +  A   +  M+ 
Sbjct: 387 VALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVH 446

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
               P T+T   L+   F  G      E+  ++             +++ +  ++   + 
Sbjct: 447 VDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDM 506

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLV 552
           V  LL  M   GL+P+  T T  +
Sbjct: 507 VFNLLTEMAKDGLIPSTGTPTNAI 530



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 11/153 (7%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
            F+EM+  G  P   TYN MI+   + +R ++    L +M  +GL PN++T+  +++   
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + GR  +  E L  +S +           G  P  +  N+L+N + ++    +A  +   
Sbjct: 65  RDGRLKETSEVLVEMSRK-----------GYVPDEVTYNTLVNGYCKEGNFHQALVLHAE 113

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           M  NGL P+VVTYT+L+ ++ +    ++    +
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 11/116 (9%)

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           R    M   G LPNVVTY T++D Y +  R           +D+A    R M   GL+P+
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKR-----------TDEAFGFLRSMGLKGLEPN 52

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            +  N +IN    D R  E   VL  M   G  PD VTY TL+    +   FH+  
Sbjct: 53  LITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQAL 108


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 246/551 (44%), Gaps = 67/551 (12%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSY----------ELLYSILIHA--LGRSEKLYEAFLLSQ 187
           NS +++   +  +   H L Y+Y          ++ + +L+    L  + KL +  LLS 
Sbjct: 163 NSKLEIGVKMTQF--THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDK-LLSY 219

Query: 188 RQRLTPLTYNALISACARNDD-LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              +T  + NA +S  A N + +E A+ +  +    G   +  +Y+++I SL R  K+  
Sbjct: 220 GLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKE 276

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   +L  +++      D    + VI G+   G+  KA++ +   Q  GL P   TY ++
Sbjct: 277 A--HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI 334

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA------------ 354
           I  L   G++ EAE V  E+    + P    Y  L+ G+ K+G+++ A            
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394

Query: 355 -----------------------EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
                                  + +  EM   G+ PDE TY+ LID Y  AG   +A  
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS 454

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  EM      PN   Y  ++ G    GE     ++L EM+  G++ +   YN M++   
Sbjct: 455 LHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A+     M   GI+PD IT+ T+ID + + G  D+A +L +EM +RG  P   
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+N+++N        ED  RLLG M  +G++P+ +TY TL+  +           C+   
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH-----------CIRNS 623

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            +     ++ MR  G+ P +   N LI    + +   EA+ + + M E G  P V +Y  
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 632 LMKALIRVDKF 642
           L+K   +  KF
Sbjct: 684 LIKRFYKKRKF 694



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 182/380 (47%), Gaps = 18/380 (4%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKP 333
             + G  S+A + L      GL     +  A ++ ++N+   IE A  VF    E G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISW 256

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T +YN ++    ++G +K+A  ++ +M+     PD  +YS +ID Y + G  + A  ++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M++   KPN + Y+ I+      G+     +VL+EM S  + PD   Y  +I  F K 
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A   FD MLS+ I PD IT+ TLI    + G+    + LF EM  RG  P   TY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +I++  +     +   L   M   G+ PN+VTY  L+D   + G  D A E L+    
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE--- 493

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   MR  GL+ +    NS++N   +     +A  +++ M+  G+ PD +TYTT++
Sbjct: 494 --------MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 634 KALIR---VDKFHKVFSSYL 650
            A  R   +DK HK+    L
Sbjct: 546 DAYCRLGDIDKAHKLLQEML 565



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 193/411 (46%), Gaps = 8/411 (1%)

Query: 168 ILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           +L+  +G+S +  +       Q++ P  + Y  LI    +   +  A     +M      
Sbjct: 336 LLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            D+I Y+ +IQ   +  K+     Q L+ E+    ++ D      +I  + KAG+   A 
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEP--QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                   +G++P   TY A+I  L   G    A  + +E+++ GL+     YN+++ G 
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K G ++ A  ++ EME +G+ PD  TY+ +IDAY   G  + A  +L+EM     +P  
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             ++ ++ G+   G  +   ++L  M   G+ PD   YN ++      N ++     + R
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M ++G+ PD+ T+N LI  H K      A  L++EM E+GY P  T+YN +I    ++ +
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           + + + L   MR  GL+ +   Y   VD+  + G     +E    L D+A+
Sbjct: 694 FXEARELFEEMRGHGLVADGEIYNFFVDMCYEEG----DVEITLNLCDEAI 740



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 158/344 (45%), Gaps = 7/344 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI   G+  K+ E       ++S+  +   +TY  LI    +  ++  A +L ++M 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y  +I  L +  ++D++   +L  E+    ++L+  + N ++ G  KAG+
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTA--NELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A++ +   +  G+ P   TY  VI A    G   +A  + +E+ + GL+P    +N 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+  +G L+D + ++  M   G++PD  TY+ L+  +       +   + K M    
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+S  Y+ ++ G+      +  + + KEM   G  P    YN +I  F K      A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
             F+ M   G+  D   +N  +D  ++ G  +    L +E  E+
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 245/525 (46%), Gaps = 27/525 (5%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG-CIPNVFSYNILLKGLCDENRSQEAL 182

Query: 184 LLSQRQRLTP----------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            L Q   + P          ++Y  +I+   +  DL+KA     +M   G   + + YS 
Sbjct: 183 ELLQ---MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I +L +   +D ++  ++   +  + +  + +  N ++ G+  +G   +A+ FL     
Sbjct: 240 IIAALCKAQAMDKAM--EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L +
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ P+ + +S+LI AYA  G+ + A +V  +M      P++  Y  ++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +   +  ++M    + P    YN +I +   ++    A      ML  GI  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DTI +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M + G+ P+ VTY TL++ Y +  R +DA+             FR M + G+ P  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALV-----------LFREMESSGVSPDIIT 586

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/529 (23%), Positives = 233/529 (44%), Gaps = 21/529 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC + + +D A  V++ + K+ +  +    Y+ ++H    S +  EA    ++
Sbjct: 237 YSSIIAALCKAQA-MDKAMEVLTSMVKNGVMPNCRT-YNSIVHGYCSSGQPKEAIGFLKK 294

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q       
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L   +  + I  +  + + +I  +AK G   +AM      +  GL+P T TY
Sbjct: 355 LVE--MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L  SGR  +A   FE++ +  L P    YN+L+           A+ ++ EM  
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+  D   ++ +ID++   GR   +  +   M     KP+   YS ++ GY   G+   
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M S G++PD   YN +I+ + K + +  A+  F  M S G+ PD IT+N ++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             F+  R   A+EL+  + E G     +TYNI+++ L +    ++  R+  N+    L  
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 652

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              T+  ++    + GR           +D+A + F  +  +GL P     + +     E
Sbjct: 653 ETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
                E   +   M+ENG   +     ++++ L++     +   +YLF 
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLFM 749



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 16/199 (8%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P+  T+  LI      GR D        + ++G+      +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +PNV +Y  L+       R  +A+E L+ + D 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             +           P  ++  ++IN F ++    +A+     M + G+ P+VVTY++++ 
Sbjct: 192 GGDC---------PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 635 ALIR---VDKFHKVFSSYL 650
           AL +   +DK  +V +S +
Sbjct: 243 ALCKAQAMDKAMEVLTSMV 261



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/227 (18%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +  ++ +A +L +      ++P  +TYN ++    +      A  L   + 
Sbjct: 552 YNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 611

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y++++  L + N  D +L  ++++ +    ++L+ +  N +I    K G 
Sbjct: 612 ESGTQLELSTYNIILHGLCKNNLTDEAL--RMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY+ +   L   G   E + +F  ++E+G    ++  N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +++  ++ G +  A   +  ++      +  T SL +D  +  G+++
Sbjct: 730 IVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLS-GGKYQ 775


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 216/455 (47%), Gaps = 16/455 (3%)

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
           R +L    +N LI      + +EKAL  ++   ++G       YS +IQ   +   + + 
Sbjct: 25  RTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNG 84

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           LL  +YK++   K   D    N +I   AKA    +A    G    + +SP   TY  +I
Sbjct: 85  LL--MYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILI 142

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            +L   GR      +FE +   G +P    Y++++  +   G + +A  +  +M + G+ 
Sbjct: 143 RSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQ 202

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD  TY++LIDA+   G+ E A   + +   S +  N   Y+ +L+    +G+ Q   ++
Sbjct: 203 PDAVTYNILIDAFGKTGQLERAFDFVGK---SRSFTNEVTYNSLLSSLGRKGDIQGLMEL 259

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             +MK+ G+  +   Y ++I+  G    +      +  M+   I+ D +T N ++DC  K
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSK 319

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            GR + A ELF++M+ +G    T TYNI+IN LG   + +    LL  M   G  PN++T
Sbjct: 320 AGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIIT 379

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y TL+  YG+                 A   F  M+  G+ P+ ++ +SLI  FG+  R 
Sbjct: 380 YNTLISSYGKWSNLS-----------AATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRT 428

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             A ++ + MK  G  P+ VTY  L+  LIR  +F
Sbjct: 429 DAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRF 463



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 199/424 (46%), Gaps = 10/424 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I    +   +    L+ +   + +  P   T+N LI + A+ D +E+A N+   M 
Sbjct: 68  YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D   Y+++I+SL    +ID+ +  KL++ +     + +    + V+  F  AG 
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVM--KLFESMTAQGCQPNLFTYHSVMHAFGSAGR 185

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY  +I A    G+T + E  F+ + +S        YN+
Sbjct: 186 VDEACDIFQQMVQKGLQPDAVTYNILIDAF---GKTGQLERAFDFVGKSRSFTNEVTYNS 242

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    + G ++    +  +M+  G++ +E TY++LI+    AGR E    +  EM  + 
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND 302

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +    + +L      G  +  F++ ++MK  G+  DT  YN++I+  G+   L  A 
Sbjct: 303 IKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAG 362

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A    M   G  P+ IT+NTLI  + K      A  LF EM+ERG  P   +Y+ +I   
Sbjct: 363 ALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGF 422

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  R +    L   M+A+G  PN VTY  L+D   ++GRF  A+E L  + D      +
Sbjct: 423 GKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGK 482

Query: 581 VMRT 584
           V ++
Sbjct: 483 VTKS 486



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 176/362 (48%), Gaps = 16/362 (4%)

Query: 166 YSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI +LG   R + + + F     Q   P   TY++++ A      +++A ++  +M 
Sbjct: 138 YTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMV 197

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D + Y+++I +  +T +     L++ +  +   +   +    N ++    + GD
Sbjct: 198 QKGLQPDAVTYNILIDAFGKTGQ-----LERAFDFVGKSRSFTNEVTYNSLLSSLGRKGD 252

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
               M   G  +  GL     TYA +I  L  +GR  +   ++ E+ ++ +K      N 
Sbjct: 253 IQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINN 312

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L    K G ++ A  +  +M+  G+  D  TY++LI+    AG+ ++A  +L EME + 
Sbjct: 313 VLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENG 372

Query: 401 AKPNSFIYSRILAGYRDRGEWQR---TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
             PN   Y+ +++ Y   G+W       ++  EMK  GV P+   Y+ +I+ FGK     
Sbjct: 373 CAPNIITYNTLISSY---GKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTD 429

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A++ F  M +EG  P+ +T+N LIDC  + GR+  A E   EM++ G      T ++++
Sbjct: 430 AAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489

Query: 518 NL 519
            +
Sbjct: 490 RI 491



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 174/386 (45%), Gaps = 56/386 (14%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++T L  + R  + + + E +++   K  T+ +N L+  Y +   ++ A   ++   + G
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P  +TYS +I  +   G  ++  ++ K+M  +   P+   ++ ++       + +   
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            V  +M    V PD + Y ++I + G    +   M  F+ M ++G +P+  T+++++   
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE------------------ 527
              GR D A ++F++M ++G  P   TYNI+I+  G+  + E                  
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240

Query: 528 -----------DVKRLL---GNMRAQGLLPNVVTYTTLVDIYGQSGRFDD---------- 563
                      D++ L+   G M+A+GL+ N +TY  L++  G +GR +D          
Sbjct: 241 NSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVD 300

Query: 564 ------------AIECLE--GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                        ++CL   G  + A   F+ M+  GL    +  N LIN  G   +   
Sbjct: 301 NDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDA 360

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKA 635
           A A+L  M+ENG  P+++TY TL+ +
Sbjct: 361 AGALLLEMEENGCAPNIITYNTLISS 386


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 255/539 (47%), Gaps = 26/539 (4%)

Query: 101  SALASSPSSLNR--VEFKLAESYRAVPAPLWH---SLLKNLCSSNSSIDLAYAVVSWLQK 155
            S L S+ + +N+  V   L E  + +  P  H   S+L N     S + LA AV+  + K
Sbjct: 699  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 156  HNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
              L Y   ++  S L++    S+++ EA  L  +  +T      +T+N LI     ++  
Sbjct: 759  --LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816

Query: 210  EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
             +A+ L+ +M   G   D + Y +V+  L +    D+ L   L  ++E  K+E    + N
Sbjct: 817  SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTDLAFNLLNKMEQGKLEPGVLIYN 874

Query: 270  DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
             +I G  K      A+      +  G+ P   TY+++I+ L N GR  +A  +  ++ E 
Sbjct: 875  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 330  GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
             + P    ++AL+  +VK G L +AE +  EM +  + P   TYS LI+ +    R + A
Sbjct: 935  KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 994

Query: 390  RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            + + + M   H  P+   Y+ ++ G+      +   +V +EM   G+  +T  YN++I  
Sbjct: 995  KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054

Query: 450  FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
              +      A   F  M+S+G+ P+ +T+NTL+D   K G+ ++A  +FE +Q     P 
Sbjct: 1055 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114

Query: 510  TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              TYNIMI  + +  + ED   L  N+  +G+ P+VV Y T++  +           C +
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF-----------CRK 1163

Query: 570  GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
            G  ++A   F+ M+ DG  P++   N+LI A   D     +  +++ M+  G   D  T
Sbjct: 1164 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 1222



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 216/468 (46%), Gaps = 26/468 (5%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            TY+ LI+   R   L  AL ++ KM + GY  + +  S ++     + +I  ++   L  
Sbjct: 732  TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV--ALVD 789

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++     + +    N +I G      AS+AM  +      G  P   TY  V+  L   G
Sbjct: 790  QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             T  A  +  ++++  L+P    YN ++ G  K  ++ DA  +  EME  G+ P+  TYS
Sbjct: 850  DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             LI    N GRW  A  +L +M      P+ F +S ++  +   G+     ++  EM   
Sbjct: 910  SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
             ++P    Y+ +I+ F  ++ L  A   F+ M+S+   PD +T+NTLI    K  R +  
Sbjct: 970  SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             E+F EM +RG    T TYNI+I  L +    +  + +   M + G+ PN++TY TL+D 
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089

Query: 555  YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
              ++G+ + A+                         C  G  +   + F  +   G+KP 
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149

Query: 591  NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +A N++I+ F       EA A+ + MKE+G  P+   Y TL++A +R
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 1197



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 13/445 (2%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           R+  L  A++L S M +       ++++ ++ ++ +  K D  ++  L K++E   I  D
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRND 222

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N VI  F      S A+  LG    +G  P   T  +++       R  +A ++ +
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ E G KP   AYNA++    K   + DA     E+ER G+ P+  TY+ L++   N+ 
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           RW  A  +L +M      PN   YS +L  +   G+     ++ +EM    ++PD   Y+
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 402

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I+    ++ +  A   FD M+S+G   D +++NTLI+   K  R +   +LF EM +R
Sbjct: 403 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G    T TYN +I    +    +  +     M   G+ P++ TY  L+     +G  + A
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 522

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +   E +  + ++   V  T           ++I    +  +  EA+++   +   GLKP
Sbjct: 523 LVIFEDMQKREMDLDIVTYT-----------TVIRGMCKTGKVEEAWSLFCSLSLKGLKP 571

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           D+VTYTT+M  L      H+V + Y
Sbjct: 572 DIVTYTTMMSGLCTKGLLHEVEALY 596



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 214/450 (47%), Gaps = 17/450 (3%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQK 251
            + ++ L+SA A+ +  +  ++L  +M+  G   +   YS++I    R +++  +L  L K
Sbjct: 696  IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 755

Query: 252  LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            + K      I     LLN    G+  +   S+A+  +      G  P T T+  +I  L 
Sbjct: 756  MMKLGYEPNIVTLSSLLN----GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 811

Query: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
               +  EA A+ + +   G +P    Y  ++ G  K G    A  ++++ME+  + P   
Sbjct: 812  LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 871

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
             Y+ +ID        + A  + KEME    +PN   YS +++   + G W    ++L +M
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                + PD   ++ +ID F K   L  A   +D M+   I+P  +T+++LI+      R 
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 492  DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
            D A+++FE M  +  FP   TYN +I    + +R E+   +   M  +GL+ N VTY  L
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 552  VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
            +    Q+G      +C     D A   F+ M +DG+ P+ +  N+L++   ++ +  +A 
Sbjct: 1052 IQGLFQAG------DC-----DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100

Query: 612  AVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             V +Y++ + ++P + TY  +++ + +  K
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 203/449 (45%), Gaps = 13/449 (2%)

Query: 209  LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            L+ A+ L  +M +       I +S ++ ++ + NK D  ++  L ++++   I  +    
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQNLGIPHNHYTY 733

Query: 269  NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            + +I  F +      A+  LG    +G  P   T ++++    +S R  EA A+ +++  
Sbjct: 734  SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793

Query: 329  SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            +G +P T  +N L+ G        +A  ++  M   G  PD  TY ++++     G  + 
Sbjct: 794  TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 389  ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
            A  +L +ME    +P   IY+ I+ G            + KEM++ G+ P+   Y+ +I 
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 449  TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                Y     A      M+   I PD  T++ LID   K G+   AE+L++EM +R   P
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 509  CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               TY+ +IN     +R ++ K++   M ++   P+VVTY TL+  + +  R ++ +E  
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME-- 1031

Query: 569  EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                      FR M   GL  + +  N LI    +      A  + + M  +G+ P+++T
Sbjct: 1032 ---------VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 1082

Query: 629  YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
            Y TL+  L +  K  K    + +    KM
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 226/532 (42%), Gaps = 83/532 (15%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--------- 245
            TYN L+     N +LEKAL +   M++     D + Y+ VI+ + +T K++         
Sbjct: 505  TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564

Query: 246  ----------------SSLLQK-LYKEIEC--DKIELDGQLLNDVIVGFAKAGDASKAMR 286
                            S L  K L  E+E    K++ +G + ND  +     GD + +  
Sbjct: 565  SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS---DGDITLSAE 621

Query: 287  FLGMAQGVGLSP------KTATYAAVITAL-SNSGRTI------------------EAEA 321
             +      G +P      K+      ++ L + SG+T                   +A A
Sbjct: 622  LIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVA 681

Query: 322  VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
            +F E+ +S   P    ++ LL    KM        +  +M+  G+  + +TYS+LI+ + 
Sbjct: 682  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 741

Query: 382  NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
               +   A  VL +M     +PN    S +L GY           ++ +M  +G +P+T 
Sbjct: 742  RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 442  FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             +N +I     +N    AMA  DRM+++G +PD +T+  +++   K G  D A  L  +M
Sbjct: 802  TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 502  QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ++    P    YN +I+ L + +  +D   L   M  +G+ PNVVTY++L+      GR+
Sbjct: 862  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 562  DDAIECLEGLSDQAVNA------------------------FRVMRTDGLKPSNLALNSL 597
             DA   L  + ++ +N                         +  M    + PS +  +SL
Sbjct: 922  SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 598  INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
            IN F    R  EA  + ++M      PDVVTY TL+K      RV++  +VF
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/513 (23%), Positives = 225/513 (43%), Gaps = 52/513 (10%)

Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C+      S+ +  LG+  KL YE            +T  +L++   R + +  A++L+ 
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM + GY  D + Y+ +I SL +T +++ +     +KEIE   I  +      ++ G   
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF--DFFKEIERKGIRPNVVTYTALVNGLCN 340

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +   S A R L       ++P   TY+A++ A   +G+ +EA+ +FEE+    + P    
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y++L+ G      + +A  +   M   G L D  +Y+ LI+ +  A R E    + +EM 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 N+  Y+ ++ G+   G+  +  +   +M   G+ PD   YN+++        L 
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  F+ M    ++ D +T+ T+I    K G+ + A  LF  +  +G  P   TY  M+
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT----------------------LVDIY 555
           + L  +    +V+ L   M+ +GL+ N  T +                       L DI 
Sbjct: 581 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDI- 639

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFR-VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
            +SG    A+  L   S +    +R  +  +GL  S L L+  +  FGE           
Sbjct: 640 -KSGVCKKALSLLRAFSGKTSYDYREKLSRNGL--SELKLDDAVALFGE----------- 685

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             M ++   P ++ ++ L+ A+ +++KF  V S
Sbjct: 686 --MVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 716



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 195/439 (44%), Gaps = 43/439 (9%)

Query: 166  YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            ++ LIH L    K  EA  L  R   +   P  +TY  +++   +  D + A NL++KM 
Sbjct: 803  FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            Q       + Y+ +I  L +   +D +L   L+KE+E   I  +    + +I      G 
Sbjct: 863  QGKLEPGVLIYNTIIDGLCKYKHMDDAL--NLFKEMETKGIRPNVVTYSSLISCLCNYGR 920

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             S A R L       ++P   T++A+I A    G+ +EAE +++E+ +  + P    Y++
Sbjct: 921  WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980

Query: 341  LLKGYVKMGYLKDA----EFVVS-------------------------------EMERSG 365
            L+ G+     L +A    EF+VS                               EM + G
Sbjct: 981  LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040

Query: 366  VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            ++ +  TY++LI     AG  + A+ + KEM      PN   Y+ +L G    G+ ++  
Sbjct: 1041 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100

Query: 426  QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
             V + ++ S +EP  + YN+MI+   K   +      F  +  +G++PD + +NT+I   
Sbjct: 1101 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 1160

Query: 486  FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
             + G  + A+ LF+EM+E G  P +  YN +I         E    L+  MR+ G   + 
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 1220

Query: 546  VTYTTLVDIYGQSGRFDDA 564
             T   + ++    GR D +
Sbjct: 1221 STIGLVTNML-HDGRLDKS 1238


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 17/459 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YN +I    +  D+ KA +L  +M Q G   D + Y+ V+ +L +   +D +  +   
Sbjct: 223 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA--EAFL 280

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++   ++  +    N++I G++  G   +A+R     +   + P   T + ++ +L   
Sbjct: 281 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 340

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  VF+ +   G  P   +YN +L GY   G L D   +   M   G+ PD +T+
Sbjct: 341 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI AYAN G  + A I+  EM     KP+   Y  ++A     G+     +   +M  
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD + YN +I  F  +  L  A      +++ G+  D + ++++I+   K GR   
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 520

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +F+     G  P    YN++++      + E   R+   M + G+ PNVV Y TLV+
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y + GR D      EGLS      FR M   G+KPS +  + +I+   E  R   A   
Sbjct: 581 GYCKIGRID------EGLS-----LFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMK 629

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              M E+G+  D+ TY  +++ L +    ++ F   +F 
Sbjct: 630 FHEMTESGIAMDICTYNIVLRGLFK----NRCFDEAIFL 664



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 202/485 (41%), Gaps = 29/485 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY  L+  C R    E AL    ++ + G   + I  + +++      + D +L   
Sbjct: 113 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 172

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL-SPKTATYAAVIT 308
           L++  E+ C        +L   +    K+G A   +R   MA+G  + SP    Y  VI 
Sbjct: 173 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM--MAEGGAVCSPNVVAYNTVID 230

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G   +A  +F+E+ + G+ P    YN+++    K   +  AE  + +M    VLP
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ LI  Y++ G+W+ A  V KEM      P+    S ++      G+ +    V 
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   G  PD   YN+M++ +    CL      FD ML +GI PD  T+N LI  +  C
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 410

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D+A  +F EM++ G  P   TY  +I  L    + +D       M  QG+ P+   Y
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470

Query: 549 TTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRT 584
             L+  +   G    A E                        C  G    A N F +   
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            GL P  +  N L++ +    +  +A  V   M   G++P+VV Y TL+    ++ +  +
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 590

Query: 645 VFSSY 649
             S +
Sbjct: 591 GLSLF 595



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 167/350 (47%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G   D + Y  VI +L R  K+D ++ +K  +
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-EKFNQ 457

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    N +I GF   G   KA   +      G+      ++++I  L   G
Sbjct: 458 MID-QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 516

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    YN L+ GY  +G ++ A  V   M  +G+ P+   Y 
Sbjct: 517 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 576

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +YS I+ G  + G          EM  S
Sbjct: 577 TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTES 636

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D   YN+++    K  C   A+  F  + +  ++ + IT NT+ID  F+  R + A
Sbjct: 637 GIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEA 696

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +      P   TY+IMI  L ++   E+ + +  +M+  G  PN
Sbjct: 697 KDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 135/571 (23%), Positives = 251/571 (43%), Gaps = 79/571 (13%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQK----------HNLCYSYELLYSIL 169
           R +P  L  ++S++  LC + + +D A A +  +            +NL Y Y       
Sbjct: 251 RGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS------ 303

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
             + G+ ++    F   +R  + P  +T + L+ +  +   +++A ++   M   G + D
Sbjct: 304 --STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361

Query: 228 FINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             +Y++++    T+   +D   +  L+  +  D I  D    N +I  +A  G   KAM 
Sbjct: 362 VFSYNIMLNGYATKGCLVD---MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +  G+ P   TY  VI AL   G+  +A   F ++ + G+ P   AYN L++G+ 
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L  A+ ++SE+  +G+  D   +S +I+     GR   A+ +          P++ 
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +Y+ ++ GY   G+ ++  +V   M S+G+EP+   Y  +++ + K   +   ++ F  M
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI----------- 515
           L  GI+P TI ++ +ID  F+ GR   A+  F EM E G      TYNI           
Sbjct: 599 LQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCF 658

Query: 516 ------------------------MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
                                   MI+ + +  R E+ K L  ++    L+P+VVTY+ +
Sbjct: 659 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIM 718

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +          + I+  EGL ++A + F  M+  G +P++  LN ++    +      A 
Sbjct: 719 I---------TNLIK--EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 767

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A L  + E     + +T      A++ VD F
Sbjct: 768 AYLSKIDERNFSLEHLT------AMLLVDLF 792



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      N LL+G+ +     +A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIYSRIL 412
           + ++      G +PD  +YS+L+ +  + G+   A  +L+ M    A   PN   Y+ ++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   YN ++    K   +  A A   +M+++ + 
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LI  +   G++  A  +F+EM+     P   T ++++  L +  + ++ + +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +Y  +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPDFY 398

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KPDVVTY T++ AL R+ K       +
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 455



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 155/373 (41%), Gaps = 7/373 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I AL R  K+ +A      ++ Q        YN LI     +  L KA  L+S++ 
Sbjct: 435 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 494

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G H D + +S +I +L +  ++  +  Q ++       +  D  + N ++ G+   G 
Sbjct: 495 NNGMHLDIVFFSSIINNLCKLGRVMDA--QNIFDLTVNVGLHPDAVVYNMLMDGYCLVGK 552

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+R        G+ P    Y  ++      GR  E  ++F E+ + G+KP T  Y+ 
Sbjct: 553 MEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 612

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  + G    A+    EM  SG+  D  TY++++        ++ A  + KE+   +
Sbjct: 613 IIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 672

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K N    + ++ G       +    +   +  S + P    Y++MI    K   +  A 
Sbjct: 673 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 732

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M + G EP++   N ++    K     RA     ++ ER +     T  ++++L 
Sbjct: 733 DMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 792

Query: 521 GEQERWEDVKRLL 533
             +    +  R L
Sbjct: 793 SSKGTCREQIRFL 805


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 234/528 (44%), Gaps = 57/528 (10%)

Query: 118 AESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
           A S +  P  + +++L + C     ++LA+A +  + K  L  +  + ++ ++  L   +
Sbjct: 4   AGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGL-RANAISFTPILRTLCAEK 62

Query: 178 KLYEAFLL----SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFI 229
           +  +A  +    + +   TP   +Y  L+         E+A++L+  M +DG HC  + +
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV 122

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +Y+ VI                                      GF K  +  KA     
Sbjct: 123 SYTTVIH-------------------------------------GFFKEDEVGKAYTLFC 145

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G+ P   T  ++I  L       +AE V  ++ +  + P    YN+L+ GY+  G
Sbjct: 146 EMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSG 205

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            LK+A  ++ +M R G  P+  TYS+LID     G    AR +L  M  S   PN   Y 
Sbjct: 206 QLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYG 265

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +L GY  +G+      ++  M  +GV PD H +N+ I  + K   L  AM  F++M  +
Sbjct: 266 GLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQ 325

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G+ PD I++ T+ID   K GR D A   F +M + G  P    +  +I+      +WE  
Sbjct: 326 GLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKA 385

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           + L   M  +G+ P VV +TT++D   + G+             +A   F +M    +KP
Sbjct: 386 EELFYEMMDRGIRPTVVVFTTMIDKLFKEGKV-----------TEAKTLFDLMPIASVKP 434

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           + ++ N++I+ +    +  E   +L  M   GLKP+ VT+ TL+  ++
Sbjct: 435 NVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDML 482



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 213/507 (42%), Gaps = 37/507 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----L 184
           +  +L+ LC+   + D    V+ W  K   C      Y++L+  L   +K  EA     +
Sbjct: 51  FTPILRTLCAEKRTSDAMNIVIRWTPKLG-CTPDVFSYTVLLKGLCDEKKCEEAVDLIHM 109

Query: 185 LSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +++     P   ++Y  +I    + D++ KA  L  +M   G   D +  + +I  L + 
Sbjct: 110 MAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKV 169

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             +D +  +++ +++    I  D    N ++ G+  +G   +A+R L      G  P   
Sbjct: 170 QAMDKA--EEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGV 227

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY+ +I  L   G   EA  +   + +S   P    Y  LL GY   G L +   ++  M
Sbjct: 228 TYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLM 287

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            ++GV PD H +++ I AY   GR + A +   +M      P+   Y  ++ G    G  
Sbjct: 288 VQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRL 347

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                   +M   G+ PD   +  +I  F  Y     A   F  M+  GI P  + + T+
Sbjct: 348 DAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTM 407

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID  FK G+   A+ LF+ M      P   +YN +I+      + ++V +LL +M + GL
Sbjct: 408 IDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGL 467

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VT+ TL+D                            M + GLKP     N+LI++ 
Sbjct: 468 KPNAVTFNTLLD---------------------------DMLSMGLKPDVATCNTLIDSC 500

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVT 628
            ED R  +   + + M     K D VT
Sbjct: 501 CEDGRIEDVLTLFREMLSKAAKTDTVT 527



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 191/458 (41%), Gaps = 49/458 (10%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S++   T +TY  LIS C     L  A   + ++ + G   + I+++ ++++L    +  
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTS 65

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            ++                    N VI    K                +G +P   +Y  
Sbjct: 66  DAM--------------------NIVIRWTPK----------------LGCTPDVFSYTV 89

Query: 306 VITALSNSGRTIEAEAVFEELKESG--LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           ++  L +  +  EA  +   + E G    P   +Y  ++ G+ K   +  A  +  EM  
Sbjct: 90  LLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLD 149

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ PD  T + +ID        + A  VL++M   H  P+   Y+ ++ GY   G+ + 
Sbjct: 150 RGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKE 209

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LK+M   G  P+   Y+++ID   K+     A    + M+     P+  T+  L+ 
Sbjct: 210 AVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLH 269

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            +   G       L + M + G  P    +NI I    +  R ++       MR QGL+P
Sbjct: 270 GYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMP 329

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++++Y T++D   + GR D            A++ F  M  DGL P  +   +LI+ F  
Sbjct: 330 DIISYGTMIDGLCKIGRLD-----------AAMSQFCQMIDDGLSPDIVVFTNLIHGFSM 378

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +  +A  +   M + G++P VV +TT++  L +  K
Sbjct: 379 YGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGK 416



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 158/357 (44%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           ++P T TY  +I+     G    A A   ++ ++GL+    ++  +L+         DA 
Sbjct: 9   VAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM 68

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRIL 412
             V+    + G  PD  +Y++L+    +  + E A  ++  M  +  H  PN   Y+ ++
Sbjct: 69  NIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVI 128

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+    E  + + +  EM   G+ PD    N +ID   K   +  A     +M  + I 
Sbjct: 129 HGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIM 188

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD  T+N+L+  +   G+   A  + ++M   G  P   TY+++I+ L +     + + +
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREI 248

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M      PNV TY  L+  Y   G   D +E          N   +M  +G++P + 
Sbjct: 249 LNSMIQSRGNPNVATYGGLLHGYATKG---DLVE--------MNNLIDLMVQNGVRPDHH 297

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N  I A+ +  R  EA      M++ GL PD+++Y T++  L ++ +     S +
Sbjct: 298 IFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQF 354


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 230/513 (44%), Gaps = 58/513 (11%)

Query: 165 LYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           ++++LIH L   G  ++  + F   +  R+ P  +TYN +IS   ++ +LEKA  L+ +M
Sbjct: 99  IFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEM 158

Query: 220 RQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + G     D + Y+ +I +  R ++I  +      ++++   I  D    N ++ G  K
Sbjct: 159 IRKGGKSAPDIVTYNTLINAFYRASRIREAC--AFREKMKAAGINPDVLTCNILVSGICK 216

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD  +A+  L   +  G  P   TY ++I AL  +G+ +EA    E LK     P    
Sbjct: 217 DGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA---EILKTMSCSPDLVT 273

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI-------------------- 377
           +N LL G+ K G L  A  V+ EM R  +LPD  TY++L+                    
Sbjct: 274 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333

Query: 378 ---------------DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
                          D    +G  E A  ++KEM V   +    +YS +++GY   G   
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++L EM S  + P    YN+++    K   +  A++    +++ G  PD +T+NTLI
Sbjct: 394 KAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLI 453

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K  R   A +L +EM  RG FP   T   ++  L    R +D   L+  M  +   
Sbjct: 454 DGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PNVV YT+L+D   +S R DDA   L+            MR  G+   + A   LI +  
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDA-----------MRGQGVALDDFAYRKLIVSMS 562

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              R AEA A+   M   G  PD  T  TL +A
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 249/549 (45%), Gaps = 66/549 (12%)

Query: 140 NSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHALG--RSEKLYEAFLLSQRQRLT 192
           +S  DLA     W       KH++ +SY  L  IL+ +    R+ K+Y+  L S     +
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDV-HSYNHLLDILVKSGHHFRTGKVYKDLLHSG---CS 59

Query: 193 P--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           P  +T+  LI    +     +AL  +  + +     D   ++++I  L +    D ++  
Sbjct: 60  PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAV-- 117

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG--MAQGVGLSPKTATYAAVIT 308
           KL++ +E  +++ +    N VI G  K+G+  KA   L   + +G   +P   TY  +I 
Sbjct: 118 KLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN 177

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A   + R  EA A  E++K +G+ P     N L+ G  K G +++A  ++  M+ +G +P
Sbjct: 178 AFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVP 237

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ +I A   AG+   A  +LK M  S   P+   ++ +L G+   G   R  +VL
Sbjct: 238 DVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVL 294

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +EM    + PD   Y ++++   +   +  A    + ++ +G  PD I + +L+D   K 
Sbjct: 295 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 354

Query: 489 GRYDRAEELFEEMQERG-----------------------------------YFPCTTTY 513
           G  + A +L +EM  RG                                     P   TY
Sbjct: 355 GEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTY 414

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           NI++  L +         L+ ++ A+G +P+VVTY TL+D   ++ R  +A +    L+D
Sbjct: 415 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD----LAD 470

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +       M + G  P+++ L S++       R  +A++++  M      P+VV YT+L+
Sbjct: 471 E-------MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523

Query: 634 KALIRVDKF 642
             L + D+ 
Sbjct: 524 DGLCKSDRM 532



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 19/349 (5%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  ++  L  SG       V+++L  SG  P    +  L++G  K G    A   +  +
Sbjct: 29  SYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRAL 88

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +   V PD + +++LI      G  + A  + + ME S  KP    Y+ +++G    G  
Sbjct: 89  DEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNL 148

Query: 422 QRTFQVLKEMKSSGVE--PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           ++  ++L+EM   G +  PD   YN +I+ F + + +  A A  ++M + GI PD +T N
Sbjct: 149 EKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCN 208

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            L+    K G  + A E+ + M+  G  P   TYN +I+ L    +  +   +L  M   
Sbjct: 209 ILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS 268

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
              P++VT+ TL+D + ++G    A+E LE            M  + + P  +    L+N
Sbjct: 269 ---PDLVTFNTLLDGFCKAGMLPRALEVLEE-----------MCRENILPDVITYTILVN 314

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKV 645
                 +   AF +L+ +   G  PDV+ YT+L+  L +   +++ HK+
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 143/318 (44%), Gaps = 25/318 (7%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+ G   D H+Y+ L+D    +G       V K++  S   PN   +  ++ G    G+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            R  + L+ +    V PD + +NV+I    K      A+  F+ M S  ++P+ +T+NT+
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 482 IDCHFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           I    K G  ++A EL EEM  +G    P   TYN +IN      R  +       M+A 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL---------------------SDQAVNA 578
           G+ P+V+T   LV    + G  ++A+E L+G+                     + + V A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +++T    P  +  N+L++ F +      A  VL+ M    + PDV+TYT L+  L R
Sbjct: 259 AEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 639 VDKFHKVFSSYLFFNIYK 656
           V +    F  YL   I +
Sbjct: 319 VGQVQVAF--YLLEEIVR 334


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 241/506 (47%), Gaps = 42/506 (8%)

Query: 168 ILIHALGRSEKLYEAFLLSQRQRLTPL-TYNALISAC-------ARNDDLEKALNLMSKM 219
           ++I  LGR  K   A  L  +    P+  Y+  + AC       +RN   ++A+ +  +M
Sbjct: 202 LMIRILGRESKYSIALKLLDK---IPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERM 258

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G     + Y++++    +  +    +L  L  E+  + ++ D    + VI    + G
Sbjct: 259 KDCGLSPSLVTYNVMLDVYGKMGRSWDKILD-LLDEMRNEGLQFDEFTCSTVISACGREG 317

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             ++A  F    +  G  P T TY A++     +G   EA  + +E++++     +  YN
Sbjct: 318 LINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYN 377

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  YV+ G+ ++   V+  M R GV+P+  TY+ +I+AY  AG+   A  +  +M+ S
Sbjct: 378 ELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKS 437

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV---MIDTFGKYNCL 456
              PN   Y+ ILA    +   +   ++L +M+ +G  P+   +N    M    GK+  +
Sbjct: 438 GCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFV 497

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           +H    F  M + G EP   T+NTLI  + +CG    A ++++EM + G+ PC TTYN +
Sbjct: 498 NHV---FREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNAL 554

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-----------FDDAI 565
           +N L  +  W+  + +L +MR +G  PN  +++ ++  Y + G            +D  I
Sbjct: 555 LNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQI 614

Query: 566 ---------ECLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                      L     +AV     AF  +  +G KP  +  NS+++ F ++     A  
Sbjct: 615 FPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQK 674

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
           +L  ++E+GL+PD+VTY +LM    R
Sbjct: 675 MLDLIRESGLQPDLVTYNSLMNMYAR 700



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/483 (22%), Positives = 214/483 (44%), Gaps = 18/483 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA  + +        L  +TYN L++A  R    E+   ++  M 
Sbjct: 341 YNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMT 400

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + Y+ VI +  R  K   +L  +L+ +++      +    N ++    K   
Sbjct: 401 RKGVMPNAVTYTTVINAYGRAGKEVKAL--QLFNQMKKSGCVPNVCTYNSILALLGKKSR 458

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + + ++ L   +  G  P   T+  ++    + G+      VF E+K  G +P    +N 
Sbjct: 459 SEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNT 518

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   DA  +  EM ++G  P   TY+ L++A A  G W++A  VL +M    
Sbjct: 519 LISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKG 578

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN   +S +L  Y   G  +   ++ K++    + P       +I    K   +    
Sbjct: 579 FKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGME 638

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF+ ++  G +PD + +N+++    K   Y+RA+++ + ++E G  P   TYN ++N+ 
Sbjct: 639 RAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMY 698

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             +      + +L  +   G  P++V+Y T++  +           C +GL  +A+    
Sbjct: 699 ARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGF-----------CRQGLMQEAIRVMS 747

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M T G+ P     N+ ++ +      AE   V+ YM +   KP+ +TY  ++    +  
Sbjct: 748 EMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKAR 807

Query: 641 KFH 643
           K+ 
Sbjct: 808 KYQ 810



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 192/413 (46%), Gaps = 7/413 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+A GR+ K  +A  L +Q ++    P   TYN++++   +    E+ + ++S MR
Sbjct: 411 YTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR 470

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + I ++ ++       K     +  +++E++    E      N +I  + + G 
Sbjct: 471 INGCPPNRITWNTLLAMCGDKGK--HKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGS 528

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A +        G +P   TY A++ AL+  G    AE+V  +++  G KP   +++ 
Sbjct: 529 ELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSL 588

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L  Y K G ++  E +  ++    + P       LI A              +E+  + 
Sbjct: 589 MLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNG 648

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  I++ +L+ +     ++R  ++L  ++ SG++PD   YN +++ + +      A 
Sbjct: 649 YKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAE 708

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                ++  G  PD +++NT+I    + G    A  +  EM  RG  PC  TYN  ++  
Sbjct: 709 EILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGY 768

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +  + +V  ++  M  +   PN +TY  +VD Y ++ ++ DA++ + G+ +
Sbjct: 769 AGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKN 821



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 44/317 (13%)

Query: 166 YSILIHALGR------SEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMS 217
           ++ LI A GR      + K+Y+  +   +   TP   TYNAL++A AR  D + A +++ 
Sbjct: 516 FNTLISAYGRCGSELDAAKMYDEMM---KAGFTPCATTYNALLNALARRGDWKAAESVLL 572

Query: 218 KMRQDGYHCDFINYSLV---------IQSLTRTNK--IDSSL------------------ 248
            MR  G+  +  ++SL+         ++ L R  K   D  +                  
Sbjct: 573 DMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCR 632

Query: 249 ----LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
               +++ ++E+  +  + D  + N ++  FAK     +A + L + +  GL P   TY 
Sbjct: 633 AVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYN 692

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++   +  G   +AE + + L +SG  P   +YN ++KG+ + G +++A  V+SEM   
Sbjct: 693 SLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ P   TY+  +  YA  G +     V+  M   + KPN   Y  I+ GY    ++Q  
Sbjct: 753 GICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812

Query: 425 FQVLKEMKSSGVEPDTH 441
              +  +K+     D H
Sbjct: 813 MDFIFGIKNIDDSFDNH 829


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 245/525 (46%), Gaps = 27/525 (5%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  +LK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 124 VDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLG-CIPNVFSYNILLKGLCDDNRSQEAL 182

Query: 184 LLSQRQRLTP----------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            L Q   + P          ++Y  +I+   +  DL+KA     +M   G   + + YS 
Sbjct: 183 ELLQ---MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSS 239

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I +L +   +D ++  ++   +  + +  + +  N ++ G+  +G   +A+ FL     
Sbjct: 240 IIAALCKAQAMDKAM--EVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L +
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVE 357

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ P+ + +S+LI AYA  G+ + A +V  +M      P++  Y  ++ 
Sbjct: 358 MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIG 417

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +   +  ++M    + P    YN +I +   ++    A      ML  GI  
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICL 477

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DTI +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +LL
Sbjct: 478 DTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M + G+ P+ VTY TL++ Y +  R +DA+             FR M + G+ P  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALV-----------LFREMESSGVSPDIIT 586

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 234/532 (43%), Gaps = 27/532 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLL 185
           + S++  LC + + +D A  V++ + K+ +   C +Y    + ++H    S +  EA   
Sbjct: 237 YSSIIAALCKAQA-MDKAMEVLTSMVKNGVMPNCRTY----NSIVHGYCSSGQPKEAIGF 291

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            ++     + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q    
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              +    +  L   +  + I  +  + + +I  +AK G   +AM      +  GL+P T
Sbjct: 352 KGALVE--MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI  L  SGR  +A   FE++ +  L P    YN+L+           A+ ++ E
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+  D   ++ +ID++   GR   +  +   M     KP+   YS ++ GY   G+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M S G++PD   YN +I+ + K + +  A+  F  M S G+ PD IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++   F+  R   A+EL+  + E G     +TYNI+++ L +    ++  R+  N+    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L     T+  ++    + GR           +D+A + F  +  +GL P     + +   
Sbjct: 650 LQLETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
             E     E   +   M+ENG   +     ++++ L++     +   +YLF 
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLFM 749



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 14/282 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + YS LI     + K+ EA      ++S   +   +TYN LI+   +   +E AL L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I Y++++Q L +T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAA--KELYVGITESGTQLELSTYNIILHGLCKN 632

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F  L  +GL P  + Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG---RWESARIVLKE 395
           + + +  ++ G L++ + +   ME +G   +    + ++      G   R  +   ++ E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              S     + ++  +L+G    G++Q   + L E   S +E
Sbjct: 753 KHFSLEASTASLFLDLLSG----GKYQEYHRFLPEKYKSFIE 790



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 16/197 (8%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P+  T+  L+      GR D        + ++G+      +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           M+  L   +R  D   + L  M   G +PNV +Y  L+       R  +A+E L+ + D 
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             +           P  ++  ++IN F ++    +A+     M + G+ P+VVTY++++ 
Sbjct: 192 GGDC---------PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242

Query: 635 ALIR---VDKFHKVFSS 648
           AL +   +DK  +V +S
Sbjct: 243 ALCKAQAMDKAMEVLTS 259



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I++       R +     LGN+  +G + + + +T ++       R  DA++ 
Sbjct: 89  PNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDI 148

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG--LKPD 625
           +           R M   G  P+  + N L+    +D R  EA  +LQ M ++G    PD
Sbjct: 149 V----------LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPD 198

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VV+YTT++    +     K + +Y
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTY 222


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 245/527 (46%), Gaps = 31/527 (5%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLG-CIPNVFSYNILLKGLCDENRSQEAL 182

Query: 184 LLSQRQRLTP----------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
            L Q   + P          ++Y  +I+   +  DL+KA     +M   G   + + Y+ 
Sbjct: 183 ELLQ---MMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNS 239

Query: 234 VIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +I +L +   +D ++  L  + K    + +  + +  N ++ G+  +G   +A+ FL   
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVK----NGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G+ P   TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +   ++  M R+G+ P+ + +S+LI AYA  G+ + A +V  +M      P++  Y  +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G  +   +  ++M    + P    YN +I +   ++    A      ML  GI
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             DTI +N++ID H K GR   +E+LF+ M   G  P   TY+ +I+      + ++  +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           LL +M + G+ P+ VTY TL++ Y +  R +DA+             FR M + G+ P  
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALV-----------LFREMESSGVSPDI 584

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  N ++    + +R A A  +   + E+G + ++ TY  ++  L +
Sbjct: 585 ITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 235/532 (44%), Gaps = 27/532 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLL 185
           ++S++  LC + + +D A  V++ + K+ +   C +Y    + ++H    S +  EA   
Sbjct: 237 YNSIIAALCKAQA-MDKAMEVLTSMVKNGVMPNCRTY----NSIVHGYCSSGQPKEAIGF 291

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            ++     + P  +TYN+L+    +N    +A  +   M + G   +   Y  ++Q    
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              +    +  L   +  + I  +  + + +I  +AK G   +AM      +  GL+P T
Sbjct: 352 KGALVE--MHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI  L  SGR  +A   FE++ +  L P    YN+L+           A+ ++ E
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+  D   ++ +ID++   GR   +  +   M     KPN   YS ++ GY   G+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGK 529

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M S G++PD   YN +I+ + K + +  A+  F  M S G+ PD IT+N 
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++   F+  R   A+EL+  + E G     +TYNI+++ L +    ++  R+  N+    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L     T+  ++    + GR           +D+A + F  +  +GL P     + +   
Sbjct: 650 LQLETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAEN 698

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
             E     E   +   M+ENG   +     ++++ L++     +   +YLF 
Sbjct: 699 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLFM 749



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 14/282 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + YS LI     + K+ EA      ++S   +   +TYN LI+   +   +E AL L  +
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I Y++++Q L +T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAA--KELYVGITESGTQLELSTYNIILHGLCKN 632

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F  L  +GL P  + Y
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG---RWESARIVLKE 395
           + + +  ++ G L++ + +   ME +G   +    + ++      G   R  +   ++ E
Sbjct: 693 SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              S     + ++  +L+G    G++Q   + L E   S +E
Sbjct: 753 KHFSLEASTASLFLDLLSG----GKYQEYHRFLPEKYKSFIE 790



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 16/197 (8%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P+  T+  LI      GR D        + ++G+      +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +PNV +Y  L+       R  +A+E L+ + D 
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             +           P  ++  ++IN F ++    +A+     M + G+ P+VVTY +++ 
Sbjct: 192 GGDC---------PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIA 242

Query: 635 ALIR---VDKFHKVFSS 648
           AL +   +DK  +V +S
Sbjct: 243 ALCKAQAMDKAMEVLTS 259



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + + +T L+       R  DA++ 
Sbjct: 89  PNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 148

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG--LKPD 625
           +           R M   G  P+  + N L+    ++ R  EA  +LQ M ++G    PD
Sbjct: 149 V----------LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VV+YTT++    +     K + +Y
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTY 222


>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 224/469 (47%), Gaps = 33/469 (7%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           ++ A AR    ++A+ +  KM++ G     + Y++++    +  +  S +L+ L  E+  
Sbjct: 243 VLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILE-LLDEMRS 301

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             +E D      VI    + G   +A RF    +  G  P TATY +++     +G   E
Sbjct: 302 KGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTE 361

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  + +E++++  +P    YN L+  YV+ G+  +   V+  M   GV+P+  TY+ +I+
Sbjct: 362 ALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVIN 421

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           AY  AG  + A  V  +M+     PN   Y+ +L     R   +   ++L +MK +G  P
Sbjct: 422 AYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPP 481

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   +N M+   G+             M + G EPD  T+NTLI  + +CG      +++
Sbjct: 482 DRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMY 541

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM   G+ PC TTYN ++N L  +  W+  + ++ +MR +G  PN  +Y+ L+  Y ++
Sbjct: 542 GEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKA 601

Query: 559 GR-----------FDDAI---------------EC--LEGLSDQAVNAFRVMRTDGLKPS 590
           G            +D  +               +C  L+G+      AF  ++ +G K  
Sbjct: 602 GNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGME----RAFHQLQNNGYKLD 657

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            + +NS+++ F  +Q+  +A  +L  +  +GL+P++VTY +L+    RV
Sbjct: 658 MVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARV 706



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/544 (22%), Positives = 222/544 (40%), Gaps = 68/544 (12%)

Query: 166 YSILIHALGRSEKLYEAFL------LSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y++++   G+  + +   L       S+       T   +ISAC R   L++A      +
Sbjct: 275 YNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDL 334

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG----- 274
           + +GY      Y+ ++Q   +      +L   + KE+E +  E D    N+++       
Sbjct: 335 KLNGYKPGTATYNSMLQVFGKAGVYTEAL--NILKEMEDNNCEPDAITYNELVAAYVRAG 392

Query: 275 ------------------------------FAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
                                         + KAGDA KA+   G  + +G  P   TY 
Sbjct: 393 FHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYN 452

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            V+  L    R+ +   +  ++K +G  P    +N +L    + G  K    V+ EM+  
Sbjct: 453 NVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNC 512

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD+ T++ LI AY   G       +  EM  +   P    Y+ +L     RG W+  
Sbjct: 513 GFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAA 572

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             V+ +M+  G +P+   Y++++  + K   +         +    + P  +   TL+  
Sbjct: 573 ESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLT 632

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++KC +    E  F ++Q  GY       N M+++    ++ E    +L  +   GL PN
Sbjct: 633 NYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPN 692

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
           +VTY +L+D+Y + G    A E                        C +GL  +A+    
Sbjct: 693 LVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILS 752

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M  +G++P  +  N+ ++ +  +   AEA  V++YM E+G  P+ +TY  ++   I+  
Sbjct: 753 EMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAK 812

Query: 641 KFHK 644
           K HK
Sbjct: 813 K-HK 815



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/408 (22%), Positives = 176/408 (43%), Gaps = 37/408 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  +I+A  +  D +KAL +  +M++ G   +   Y+ V+  L + ++  S  + K+ 
Sbjct: 414 ITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSR--SEDMIKIL 471

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +++ +    D    N ++    + G      + L   +  G  P   T+  +I+A    
Sbjct: 472 CDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRC 531

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  ++   ++ E+  +G  P    YNALL    + G  K AE VV +M + G  P+E +Y
Sbjct: 532 GSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSY 591

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPN-SFIYSRILAGYRDRG------------- 419
           SLL+  Y+ AG       V  E+   H  P+   + + +L  Y+ R              
Sbjct: 592 SLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQN 651

Query: 420 ---------------------EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                                + ++  ++L  +  SG++P+   YN +ID + +      
Sbjct: 652 NGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWK 711

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      + + GI PD +++NT+I    K G    A  +  EM   G  PC  T+N  ++
Sbjct: 712 AEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMS 771

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                  + +   ++  M   G +PN +TY  ++D Y ++ +  +A++
Sbjct: 772 CYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAMD 819



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 17/238 (7%)

Query: 411 ILAGYRDRGEWQRTFQVLK----EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +L G    G W+R F + +       S  ++ D      M+   G+ +    A   FD +
Sbjct: 169 LLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDII 228

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER- 525
             E    D     T++  + + G+Y RA E+FE+M+E G  P   TYN+M+++ G+  R 
Sbjct: 229 PVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRA 288

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           W  +  LL  MR++GL  +  T TT++   G+           EG+ D+A   F  ++ +
Sbjct: 289 WSMILELLDEMRSKGLEFDEFTCTTVISACGR-----------EGILDEARRFFDDLKLN 337

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           G KP     NS++  FG+     EA  +L+ M++N  +PD +TY  L+ A +R   FH
Sbjct: 338 GYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAG-FH 394


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 198/398 (49%), Gaps = 12/398 (3%)

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           G+L + +I    + G    A      A   G       ++A+I+A   SG   EA  VFE
Sbjct: 185 GKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFE 244

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            +K SGLKP    YNA++    K G     A  +  EM R+GV PD  T++ L+      
Sbjct: 245 TMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRG 304

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G WE+AR +  EM     + + F Y+ +L      G+    FQ++ EM    + P+   Y
Sbjct: 305 GLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTY 364

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + +ID + K   L  A+  F+ M    I  D +++NTL+  + K GR++ A  + +EM+ 
Sbjct: 365 STVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMES 424

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G      TYN ++   G+Q ++E+VKR+   M+A+ + PN++TY+TL+D+Y + G + +
Sbjct: 425 SGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQE 484

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E            FR  +  GLK   +  ++LI+A  ++     A + L  M + G++
Sbjct: 485 AME-----------VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIR 533

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
           P+VVTY +++ A  R      V       N+ KM S S
Sbjct: 534 PNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSS 571



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 240/515 (46%), Gaps = 38/515 (7%)

Query: 158 LCYSYELLYSILIHALG-RSE-----KLYE-AFLLSQRQRLTPLTYNALISACARNDDLE 210
           LC S +  Y+ L+  LG R E     + +E A    QR+       +A+IS   R   +E
Sbjct: 145 LCGSDD--YTFLLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAMISILGRLGQVE 202

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A N+      +GY      +S +I +  R+   D ++  K+++ ++   ++ +    N 
Sbjct: 203 LAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAI--KVFETMKSSGLKPNLVTYNA 260

Query: 271 VIVGFAKAG-DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           VI    K G D ++A          G+ P   T+ +++      G    A  +F E+   
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR 320

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++     YN LL    K G +  A  ++SEM R  ++P+  TYS +ID YA AGR + A
Sbjct: 321 GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEA 380

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  EM+ +    +   Y+ +L+ Y   G ++    V KEM+SSG++ D   YN ++  
Sbjct: 381 LNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGG 440

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +GK          F+ M +E I P+ +T++TLID + K G Y  A E+F E ++ G    
Sbjct: 441 YGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKAD 500

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL- 568
              Y+ +I+ L +    E     L  M  +G+ PNVVTY +++D +G+SG    + EC+ 
Sbjct: 501 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG----SAECVI 556

Query: 569 -----EGLSDQAVNAFRVMRTD-----GLKPSN--------LALNSLINAFGEDQRDAE- 609
                  +S  + ++ +V+        G K  N        LA     +A  E++   E 
Sbjct: 557 DPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEI 616

Query: 610 --AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
               AV   M E  +KP+VVT++ ++ A  R + F
Sbjct: 617 LCILAVFHKMHELDIKPNVVTFSAILNACSRCNSF 651



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 35/340 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+ A  +   ++ A  +MS+M +     + + YS VI    +  ++D +L   L+
Sbjct: 327 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEAL--NLF 384

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++   I LD    N ++  +AK G   +A+      +  G+     TY A++      
Sbjct: 385 NEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQ 444

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  E + VFEE+K   + P    Y+ L+  Y K G  ++A  V  E +++G+  D   Y
Sbjct: 445 GKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLY 504

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ----------- 422
           S LIDA    G  ESA   L EM     +PN   Y+ I+  +   G  +           
Sbjct: 505 SALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNV 564

Query: 423 -----RTFQVLKEMKSS--GVEPDTHFYNVMIDTFGKYNCLHHA-------------MAA 462
                 + +V+++   S  G + D     +      +  C  HA             +A 
Sbjct: 565 SKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTC--HAKKENRGRQEILCILAV 622

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           F +M    I+P+ +T++ +++   +C  ++ A  L EE++
Sbjct: 623 FHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELR 662


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 227/523 (43%), Gaps = 37/523 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I I +  R+ + Y A  L +   +       + Y  +++      D ++A  L  +M 
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +     D   ++ ++ +L +   +  S  L  K+ K   C  +       N  I G  K 
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL----FTFNIFIQGLCKE 343

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A+R LG     GL P   TY  VI  L    R +EAE    ++   G +P    Y
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+++ GY K G + DA  ++ +    G  PDE TY  L++ +   G  + A  V K+   
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P+  +Y+ ++ G   +G      Q++ EM   G +PD   YN++I+   K  CL  
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A       +++G  PD  T+NTL+D + +  + D A EL   M  +G  P   TYN ++N
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
            L +  + E+V  +   M  +G  PN++TY T+++    S + ++A++            
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643

Query: 567 ------------CLEGLSDQAVNAFRVMRTD-GLKPSNLALNSLINAFGEDQRDAEAFAV 613
                       C  G  D A   FR M     +  +    N +I+AF E      A  +
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRL 703

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
              MK+NG  PD  TY  L+    +    ++ +  +L  NI K
Sbjct: 704 FSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGY-KFLLENIEK 745



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 208/497 (41%), Gaps = 65/497 (13%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
            R   +++A++   +M  D ++CD    +Y+ ++  L      + +   K+Y  ++  K+
Sbjct: 166 GRKGKIQEAVDTFERM--DLFNCDPSVYSYNAIMNILVEFGYFNQA--HKVYMRMKDKKV 221

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E D       I  F + G    A+R L     +G       Y  V+T     G    A  
Sbjct: 222 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 281

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+E+ E  L P    +N L+    K G++ ++E +  ++ + GV P+  T+++ I    
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G  + A  +L  +     +P+   Y+ ++ G   +       + L +M + G EP+  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 442 FYNVMIDTFGKYNCL-----------------------------------HHAMAAFDRM 466
            YN +ID + K   +                                     AMA F   
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L +G+ P  I +NTLI    + G    A +L  EM E+G  P   TYN++IN L +    
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
            D   L+G+   +G +P++ TY TLVD Y +  + D AIE                    
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C    S++ +  F+ M   G  P+ +  N++I +    ++  EA  +L  MK  GL
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 623 KPDVVTYTTLMKALIRV 639
            PDVV++ TL+    +V
Sbjct: 642 TPDVVSFGTLITGFCKV 658



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 187/462 (40%), Gaps = 67/462 (14%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
            C RN      L L+ K +Q G+      Y  ++Q L    K +   ++ L  E+   + 
Sbjct: 100 VCIRN------LQLIKKTKQ-GFKHTLFTYKSMLQKLGFHGKFNE--MENLLSEM---RS 147

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
            LD  LL  V V         +AMRF G                        G+  EA  
Sbjct: 148 NLDNTLLEGVYV---------EAMRFYG----------------------RKGKIQEAVD 176

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
            FE +      P   +YNA++   V+ GY   A  V   M+   V  D +TY++ I ++ 
Sbjct: 177 TFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFC 236

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             GR  +A  +L+ M V     N+  Y  ++ G+ + G+  R  ++  EM    + PD  
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVT 296

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            +N ++    K   +  +   FD++L  G+ P+  T+N  I    K G  DRA  L   +
Sbjct: 297 TFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCV 356

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G  P   TYN +I  L  + R  + +  L  M   G  PN  TY +++D Y + G  
Sbjct: 357 SREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            DA                          C +G  DQA+  F+     GL+PS +  N+L
Sbjct: 417 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 476

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           I    +      A  ++  M E G KPD+ TY  ++  L ++
Sbjct: 477 IKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 136/589 (23%), Positives = 227/589 (38%), Gaps = 131/589 (22%)

Query: 166 YSILIHALGR------SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ L+HAL +      SE+L++  L   ++ + P   T+N  I    +   L++A+ L+ 
Sbjct: 298 FNKLVHALCKKGFVLESERLFDKVL---KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLG 354

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL-----------YKEI---ECDK- 260
            + ++G   D + Y+ VI  L R +++  +   L K+           Y  I    C K 
Sbjct: 355 CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414

Query: 261 IELDG-QLLNDVIV---------------GFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           + +D  ++L D +                GF + GD  +AM       G GL P    Y 
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYN 474

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I  L   G  + A  +  E+ E G KP    YN ++ G  KMG L DA  ++ +    
Sbjct: 475 TLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK 534

Query: 365 GVLPDEHTYSLLIDAYANAGRWESA-----RI---------------------------- 391
           G +PD  TY+ L+D Y    + +SA     R+                            
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594

Query: 392 --VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD---------- 439
             + K M      PN   Y+ I+    +  +      +L EMKS G+ PD          
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654

Query: 440 --------------------------THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                                     T  YN++I  F +   +  A+  F  M   G +P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+  LID   K G  ++  +   E  E+G+ P  TT+  ++N L  + + ++   ++
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL-EGLSDQAVNAFRVMRTDGLKPSNL 592
             M  + ++P+ V      D  G       A E L +G+ D+ +          LK  + 
Sbjct: 775 HLMVQKDIVPDTVNTIFEADKKGHITY--HAYEFLYDGVRDKKI----------LKKKHP 822

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             NSL     E +  A+ +      +    KP+VV  T    +L  VDK
Sbjct: 823 NWNSLRR---EPRSSADVWCFWFVSRMGAFKPNVVKITLKSSSLSTVDK 868


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 253/538 (47%), Gaps = 29/538 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF--LLS 186
           LLK LC +  S D    ++  + +  +     + YS ++ +L    RS++  +    ++ 
Sbjct: 160 LLKCLCHAKRSDDAVNVLLHRMPELGV-EPDTISYSTVLKSLCEDSRSQRALDLLHTMVK 218

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +    +P  ++YN +I    R  ++ KA NL  +M Q G   D + YS  I +L +   +
Sbjct: 219 KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAM 278

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D + L  + +++  +  E D    N +I G++  G   +           GL P   T  
Sbjct: 279 DKAEL--VLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           + +++L   G++ EA   F+ +   G KP    Y+ LL GY   GY+ D   + + ME +
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN 396

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G++ D   Y++LIDAY   G  + A ++  +M+     P+++ Y  ++A +   G     
Sbjct: 397 GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADA 456

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPDTITWNTLID 483
                +M + G++PDT  YN +I  F  +  L  A      M+S GI  P+T+ +N++I+
Sbjct: 457 MDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR   A+++F+ +   G  P   T+N +I+  G   + E    +L  M + G+ P
Sbjct: 517 SLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +VVTY+ L+D Y ++GR DD +             FR M + G+KP+ +    +++    
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLI-----------LFREMLSKGVKPTTITYGIILHGLFN 625

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-------VDKFHKVFSSYLFFNI 654
           D R   A  +   M E+G   D+ T   ++  L R       +  F K+ +  + FNI
Sbjct: 626 DGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI 683



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 222/486 (45%), Gaps = 30/486 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALIS----AC----ARNDDLEKALN-LM 216
           Y+IL+    R+ +    F L  R   T L  + +++     C     R+DD   A+N L+
Sbjct: 122 YNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDD---AVNVLL 178

Query: 217 SKMRQDGYHCDFINYSLVIQSL---TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            +M + G   D I+YS V++SL   +R+ +    L   + K   C    +     N VI 
Sbjct: 179 HRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVS---YNTVIH 235

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF + G+ SKA          G+ P   TY++ I AL  +    +AE V  ++  +G +P
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN ++ GY  +G  K+   +  EM R G++PD  T +  + +    G+ + A    
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M     KP+   YS +L GY   G       +   M+ +G+  D   YN++ID +GK 
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKR 415

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  AM  F +M   G+ PD  T+ T+I    + GR   A + F +M   G  P T  Y
Sbjct: 416 GMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVY 475

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGL-LPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           N +I            K L+  M ++G+  PN V + ++++             C EG  
Sbjct: 476 NSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSL-----------CKEGRV 524

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A + F ++   G +P  +  NSLI+ +G   +  +AF VL  M   G++PDVVTY+ L
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSAL 584

Query: 633 MKALIR 638
           +    R
Sbjct: 585 LDGYCR 590



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 234/536 (43%), Gaps = 58/536 (10%)

Query: 163 ELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y+ +IH    LG+ ++    F    R+ L P   T N+ +S+  ++   ++A     
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G+  D + YS+++        +   L   L+  +E + I  D  + N +I  + K
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDML--NLFNSMEGNGIVADHSVYNILIDAYGK 414

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +AM      Q  G+ P   TY  VI A S  GR  +A   F ++   GLKP T  
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIV 474

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           YN+L++G+   G L  A+ ++SEM   G+  P+   ++ +I++    GR   A+ +   +
Sbjct: 475 YNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLV 534

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +P+   ++ ++ GY   G+ ++ F VL  M S G+EPD   Y+ ++D + +   +
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRI 594

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT---- 512
              +  F  MLS+G++P TIT+  ++   F  GR   A+++  EM E G     +T    
Sbjct: 595 DDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGII 654

Query: 513 -------------------------------YNIMINLLGEQERWEDVKRLLGNMRAQGL 541
                                           N MI+ + +  + E+   L  ++ A GL
Sbjct: 655 LGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGL 714

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +PN  TY  ++    +           EG  ++A N F +M   G  PS+  LN++I   
Sbjct: 715 VPNASTYGVMITNLLK-----------EGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVL 763

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS----YLFFN 653
            E    ++A   L  +    +  +  T + ++    R  K+ +   S    Y FF+
Sbjct: 764 LEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQFFD 819



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 21/360 (5%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EF 356
           P   TY  ++     + R     A+F    ++GLK      N LLK         DA   
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRILAG 414
           ++  M   GV PD  +YS ++ +     R + A  +L  M  +     PN   Y+ ++ G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +   GE  +   +  EM   GV PD   Y+  ID   K   +  A     +M+S G EPD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+N +I  +   G++     +F EM  RG  P   T N  ++ L +  + ++      
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M A+G  P++VTY+ L+  Y   G   D +           N F  M  +G+   +   
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDML-----------NLFNSMEGNGIVADHSVY 405

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-------VDKFHKVFS 647
           N LI+A+G+     EA  +   M+E G+ PD  TY T++ A  R       +DKF+++ +
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 215/459 (46%), Gaps = 17/459 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YN +I    +  D+ KA +L  +M Q G   D + Y+ V+ +L +   +D +  +   
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA--EAFL 277

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++   ++  +    N++I G++  G   +A+R     +   + P   T + ++ +L   
Sbjct: 278 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  VF+ +   G  P   +YN +L GY   G L D   +   M   G+ PD +T+
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 397

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI AYAN G  + A I+  EM     KP+   Y  ++A     G+     +   +M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD + YN +I  F  +  L  A      +++ G+  D + ++++I+   K GR   
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 517

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +F+     G  P    Y+++++      + E   R+   M + G+ PNVV Y TLV+
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 577

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y + GR D      EGLS      FR M   G+KPS +  + +I+   +  R   A   
Sbjct: 578 GYCKIGRID------EGLS-----LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              M E+G+  D+ TY  +++ L +    ++ F   +F 
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFK----NRCFDEAIFL 661



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 235/529 (44%), Gaps = 43/529 (8%)

Query: 166 YSILIHALGRSEK--LYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           Y+IL+    R+ +  L  AF   LL    R+  +  N L+         ++AL+ L+ + 
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRT 173

Query: 220 RQDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            + G   D  +YS++++SL    ++ + D  L         C     +    N VI GF 
Sbjct: 174 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP---NVVAYNTVIDGFF 230

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K GD +KA          G+ P   TY +V+ AL  +    +AEA   ++    + P   
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW 290

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+ GY   G  K+A  V  EM R  +LPD  T S+L+ +    G+ + AR V   M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    P+ F Y+ +L GY  +G       +   M   G+ PD + +NV+I  +     L
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  F+ M   G++PD +T+ T+I    + G+ D A E F +M ++G  P    YN +
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           I            K L+  +   G+  ++V ++++++   + GR  DA            
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         CL G  ++A+  F  M + G++P+ +   +L+N + +  R  E  +
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVD-------KFHKVFSSYLFFNI 654
           + + M + G+KP  + Y+ ++  L +         KFH++  S +  +I
Sbjct: 591 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDI 639



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 234/491 (47%), Gaps = 21/491 (4%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQ-RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++HAL ++  +   EAFL     +R+ P   TYN LI   +     ++A+ +  +MR
Sbjct: 257 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D +  S+++ SL +  KI  +  + ++  +       D    N ++ G+A  G 
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEA--RDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                    +  G G++P   T+  +I A +N G   +A  +F E+++ G+KP    Y  
Sbjct: 375 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    ++G + DA    ++M   GV PD++ Y+ LI  +   G    A+ ++ E+  + 
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              +   +S I+      G       +     + G+ PD   Y++++D +     +  A+
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M+S GIEP+ + + TL++ + K GR D    LF EM +RG  P T  Y+I+I+ L
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGL 614

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  R    K     M   G+  ++ TY  ++      G F +   C     D+A+  F+
Sbjct: 615 FQAGRTVPAKVKFHEMTESGIAMDICTYNIVL-----RGLFKN--RCF----DEAIFLFK 663

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-- 638
            +R   +K + + LN++I+   + +R  EA  +   +  + L P VVTY+ ++  LI+  
Sbjct: 664 ELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 723

Query: 639 -VDKFHKVFSS 648
            V++   +FSS
Sbjct: 724 LVEEAEDMFSS 734



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 202/485 (41%), Gaps = 29/485 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY  L+  C R    E AL    ++ + G   + I  + +++      + D +L   
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 169

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL-SPKTATYAAVIT 308
           L++  E+ C        +L   +    K+G A   +R   MA+G  + SP    Y  VI 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM--MAEGGAVCSPNVVAYNTVID 227

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G   +A  +F+E+ + G+ P    YN+++    K   +  AE  + +M    VLP
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ LI  Y++ G+W+ A  V KEM      P+    S ++      G+ +    V 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   G  PD   YN+M++ +    CL      FD ML +GI PD  T+N LI  +  C
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D+A  +F EM++ G  P   TY  +I  L    + +D       M  QG+ P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 549 TTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRT 584
             L+  +   G    A E                        C  G    A N F +   
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            GL P  +  + L++ +    +  +A  V   M   G++P+VV Y TL+    ++ +  +
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587

Query: 645 VFSSY 649
             S +
Sbjct: 588 GLSLF 592



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 166/350 (47%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G   D + Y  VI +L R  K+D ++ +K  +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-EKFNQ 454

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    N +I GF   G   KA   +      G+      ++++I  L   G
Sbjct: 455 MID-QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    Y+ L+ GY  +G ++ A  V   M  +G+ P+   Y 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYC 573

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +YS I+ G    G          EM  S
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTES 633

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D   YN+++    K  C   A+  F  + +  ++ + IT NT+ID  F+  R + A
Sbjct: 634 GIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEA 693

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +      P   TY+IMI  L ++   E+ + +  +M+  G  PN
Sbjct: 694 KDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/562 (23%), Positives = 247/562 (43%), Gaps = 73/562 (12%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQK----------HNLCYSYELLYSIL 169
           R +P  L  ++S++  LC + + +D A A +  +            +NL Y Y       
Sbjct: 248 RGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS------ 300

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
             + G+ ++    F   +R  + P  +T + L+ +  +   +++A ++   M   G + D
Sbjct: 301 --STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 228 FINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             +Y++++    T+   +D   +  L+  +  D I  D    N +I  +A  G   KAM 
Sbjct: 359 VFSYNIMLNGYATKGCLVD---MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +  G+ P   TY  VI AL   G+  +A   F ++ + G+ P   AYN L++G+ 
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L  A+ ++SE+  +G+  D   +S +I+     GR   A+ +          P++ 
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +YS ++ GY   G+ ++  +V   M S+G+EP+   Y  +++ + K   +   ++ F  M
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI----------- 515
           L  GI+P TI ++ +ID  F+ GR   A+  F EM E G      TYNI           
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCF 655

Query: 516 ------------------------MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
                                   MI+ + +  R E+ K L  ++    L+P+VVTY+ +
Sbjct: 656 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIM 715

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +          + I+  EGL ++A + F  M+  G +P++  LN ++    +      A 
Sbjct: 716 I---------TNLIK--EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 764

Query: 612 AVLQYMKENGLKPDVVTYTTLM 633
           A L  + E     + +T   L+
Sbjct: 765 AYLSKIDERNFSLEHLTTMLLV 786



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      N LL+G+ +     +A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIYSRIL 412
           + ++      G +PD  +YS+L+ +  + G+   A  +L+ M    A   PN   Y+ ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   YN ++    K   +  A A   +M+++ + 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LI  +   G++  A  +F+EM+     P   T ++++  L +  + ++ + +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +Y  +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPDFY 395

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KPDVVTY T++ AL R+ K       +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 7/373 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I AL R  K+ +A      ++ Q        YN LI     +  L KA  L+S++ 
Sbjct: 432 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 491

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G H D + +S +I +L +  ++  +  Q ++       +  D  + + ++ G+   G 
Sbjct: 492 NNGMHLDIVFFSSIINNLCKLGRVMDA--QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 549

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+R        G+ P    Y  ++      GR  E  ++F E+ + G+KP T  Y+ 
Sbjct: 550 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 609

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  + G    A+    EM  SG+  D  TY++++        ++ A  + KE+   +
Sbjct: 610 IIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K N    + ++ G       +    +   +  S + P    Y++MI    K   +  A 
Sbjct: 670 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 729

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M + G EP++   N ++    K     RA     ++ ER +     T  ++++L 
Sbjct: 730 DMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789

Query: 521 GEQERWEDVKRLL 533
             +    +  R L
Sbjct: 790 SSKGTCREHIRFL 802


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 237/545 (43%), Gaps = 41/545 (7%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++  LC S   +D A  +   +    + Y   + Y  LI  LG+  ++ EA+ L +  R 
Sbjct: 1   MIDGLCKSRK-VDKAITLFKQMVDKAI-YPDVVTYGALIDGLGKQRRVKEAYDLFEEARA 58

Query: 192 -----TPLTYNALISACARNDDLEKALNLMSKMR-QDGYHCDFINYSLVIQSLTRTNKID 245
                T +TYN +I    +   +E AL L   M    G+    + YS +I  L R +++D
Sbjct: 59  KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
                KL +E+       +    N ++      G + +A   L      G  P+  T+  
Sbjct: 119 KGC--KLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGL 176

Query: 306 VITALSNSGRTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +I  L   G    A  V +E+   ESGL P    +N++L G  K   + DA  V      
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  TYS LID  +   + + A  +L +M     + N+  YS ++ G    G  + 
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              VL++M+ +G  PD   YN +ID F K   L  A+     ML  G  P  +T+ TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL-- 354

Query: 484 CHFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQG 540
           CH  C  GR+D A E+ + M  RG  P   TY+ +++ L +  R  +       M R + 
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAV 576
           + P+V+ Y+ L+D   ++G+ D+A E LE                        G  D  +
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M   G  P  +   +L++      R  EAF + Q M+ +GL PD  T  T++  L
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534

Query: 637 IRVDK 641
           + V++
Sbjct: 535 LEVNR 539



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 227/514 (44%), Gaps = 35/514 (6%)

Query: 169 LIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           +I  L +S K+ +A  L ++   + + P  +TY ALI    +   +++A +L  + R  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD-KIELDGQLLNDVIVGFAKAGDAS 282
            H   + Y+ +I  L +  +I+++L   LY ++             + +I G  +  +  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENAL--TLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           K  + L    G G +P   TY  ++ AL   GR+ EA ++ E++  +G  P    +  ++
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178

Query: 343 KGYVKMGYLKDAEFVVSEM--ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           KG  K G ++ A  VV EM    SG+ PD  T++ ++D      R   A  V K      
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +PN   YS ++ G     +     Q+L +M   G   +T  Y+ ++D   K   +  A+
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               +M   G  PD +T+NTLID  FK  R   A  L  EM E G+ P   TY  + + L
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
               R+++   +L  M A+G  PN +TY+++VD   ++GR  +A+               
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G  D+A      M   G  P  +  + LIN   +  R      + +
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M E G  PD+VTY TL+  L R  +  + F  +
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLF 512



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 22/490 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++  LC     I+ A  +   +  H       + YS LI  L R  ++ +   L + 
Sbjct: 68  YNTMIDGLCKCGR-IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +   P  +TYN L++A       ++A +L+ +M  +G   + I + L+I+ L +  +
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           I+++  ++ +++  IE   +  D    N V+ G  K      A      A   G  P   
Sbjct: 187 IEAAFRVVDEMFM-IE-SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 244

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY+ +I  LS   +  EA  +  ++ E G +  T  Y+ ++ G +K+G ++DA  V+ +M
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM 304

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +G LPD  TY+ LID +    R   A  +L+EM  +   P+   Y+ +  G    G +
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 364

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNT 480
               ++L  M + G  P+   Y+ ++D   K   +  A+  F++M   E + P  I ++ 
Sbjct: 365 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 424

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LID   K G+ D A E  E M   G  P   T++I+IN L +  R +    L   M  +G
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERG 484

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            +P++VTY TLVD   ++ R            D+A + F+ MR+DGL P      ++I+ 
Sbjct: 485 CVPDMVTYATLVDRLCRASRV-----------DEAFDLFQQMRSDGLSPDRSTRRTMIHG 533

Query: 601 FGEDQRDAEA 610
             E  RD +A
Sbjct: 534 LLEVNRDEDA 543



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 168/384 (43%), Gaps = 10/384 (2%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTP--LTYNALISACARNDDL 209
           N C    + + ++I  L +  ++  AF     +      L+P  +T+N+++    +   +
Sbjct: 165 NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRI 224

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
             A N+  +  + G   + + YS +I  L++  K+D +L Q L K +E      +    +
Sbjct: 225 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL-QLLAKMVEL-GCRANTVTYS 282

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            V+ G  K G    A+  L   +  G  P   TY  +I       R  EA  +  E+ E+
Sbjct: 283 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P    Y  L  G  + G   +A  ++  M   G  P+  TYS ++D    AGR   A
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402

Query: 390 RIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
               ++M       P+   YS ++ G    G+    ++ L+ M  +G  PD   ++++I+
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                  +   +  F  M   G  PD +T+ TL+D   +  R D A +LF++M+  G  P
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522

Query: 509 CTTTYNIMINLLGEQERWEDVKRL 532
             +T   MI+ L E  R ED KR+
Sbjct: 523 DRSTRRTMIHGLLEVNRDEDAKRI 546



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 178/398 (44%), Gaps = 16/398 (4%)

Query: 115 FKLAESYRAVPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSIL 169
           F L E   A   P     +  ++K LC     I+ A+ VV  +       S +++ ++ +
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCK-EGEIEAAFRVVDEMFMIESGLSPDVITFNSV 214

Query: 170 IHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           +  L + +++ +A  + +R      R   +TY+ LI   ++   +++AL L++KM + G 
Sbjct: 215 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 274

Query: 225 HCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
             + + YS V+  L +  ++ D+ ++ +  ++  C     D    N +I GF K     +
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP---DAVTYNTLIDGFFKRQRLRE 331

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+  L      G  P   TY  +   L  SGR  EA  + + +   G  P    Y++++ 
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 391

Query: 344 GYVKMGYLKDAEFVVSEMERSGVL-PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           G  K G + +A     +M R  V+ P    YS LID    AG+ + A   L+ M  +   
Sbjct: 392 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+   +S ++ G  D G      ++ + M   G  PD   Y  ++D   + + +  A   
Sbjct: 452 PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDL 511

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           F +M S+G+ PD  T  T+I    +  R + A+ + +E
Sbjct: 512 FQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 227/493 (46%), Gaps = 21/493 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS LI A  +   L  A  + +  R     L  +TYN LI    R   +E+A     +M 
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y  +I  L +  + D +  + L  E+ C  +  +  + + +I GF + G+
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQA--KCLLDEMSCAGLMPNVVVYSTLIDGFMRQGN 363

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A +A + +      G+ P   TY  +I  L   GR   A  + +++ + G    T  YN 
Sbjct: 364 ADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNL 423

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +++G+++    ++A  +++EM + G+ P+ +TYS++I+     G  E A  +L++M    
Sbjct: 424 VIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG 483

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN+F+Y+ +++GY   G +    + LK+M    + PD + YN +I        +  A+
Sbjct: 484 LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAI 543

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +D ML +G +P+  T+  LI  +   G  ++AE+L  +M   G  P    Y  ++   
Sbjct: 544 EYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGY 603

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            + +  E V   L +M  +GL+P+   Y  ++     SG               AV+   
Sbjct: 604 FKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHM-----------QAAVSVLS 652

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           V+  +GL P +L   SLI+ F +     +A  +L  M + G++P +  Y  L+    + D
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712

Query: 641 KF---HKVFSSYL 650
                  +F+S +
Sbjct: 713 DISHARNIFNSII 725



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 240/563 (42%), Gaps = 36/563 (6%)

Query: 116 KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           K  E Y  VP    +  + N        D A  ++  +    L  +  ++YS LI    R
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNV-VVYSTLIDGFMR 360

Query: 176 SEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
                EAF + +       +   +TY+ LI    +   + +A  ++ +M + GY  D + 
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+LVI+   R +  + + L  L  E+    I  +    + +I G  + G++ +A   L  
Sbjct: 421 YNLVIEGHLRQHNKEEAFL--LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P    YA +I+     G    A    +++    L P    YN+L+ G   +G 
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A     EM   G  P++ TY  LI  Y+ AG  E A  +L +M  S   PN FIY++
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           IL GY      ++    LK M   G+ PD   Y ++I        +  A++    +   G
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNG 658

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + PD++ + +LI    K    ++A  L +EM ++G  P  + YN +I+   + +     +
Sbjct: 659 LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTD 585
            +  ++  +GL PN VTYTTL+D Y ++G   DAI+       EG++  A   + V+   
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAF-VYSVLAAG 777

Query: 586 GLKPSNL-------------------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                +L                   + N+L++ F +  +  E    L  M +  + P +
Sbjct: 778 CSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSL 837

Query: 627 VTYTTLMKALIRVDKF---HKVF 646
           +T   ++  L    K    H +F
Sbjct: 838 LTVENIVIGLGEAGKLSEAHTIF 860



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 179/384 (46%), Gaps = 24/384 (6%)

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G  +G G+SP   TY+ +I A         A+ V EE++E+G       YN L+ G  + 
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G +++A     EME  G++PD  TY  +I+     GR + A+ +L EM  +   PN  +Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S ++ G+  +G     F+++KEM ++GV+P+   Y+ +I    K   +  A     +M  
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G   DT+T+N +I+ H +    + A  L  EM++ G  P   TY+I+IN L +    E 
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------- 569
              LL  M A GL PN   Y  L+  Y + G F  A E L+                   
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531

Query: 570 GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           GLS     D+A+  +  M   G +P++     LI+ +       +A  +L  M  +GL P
Sbjct: 532 GLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNP 591

Query: 625 DVVTYTTLMKALIRVDKFHKVFSS 648
           +   Y  +++   + D   KV S+
Sbjct: 592 NDFIYAQILEGYFKSDNLEKVSST 615



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 228/497 (45%), Gaps = 25/497 (5%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+++I    R     EAFLL    R   ++P   TY+ +I+   +  + E+A  L+ +
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  DG   +   Y+ +I    R      SL  +  K++  + +  D    N +I+G +  
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSF--SLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A+ +       G  P   TY  +I   S +G   +AE +  ++  SGL P    Y
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +L+GY K   L+     +  M   G++PD   Y ++I   +++G  ++A  VL  +E 
Sbjct: 597 AQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   P+S IY  +++G+    + ++   +L EM   G+EP    YN +ID F K + + H
Sbjct: 657 NGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISH 716

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ ++ +G+ P+ +T+ TLID + K G    A +L+ EM   G  P    Y+++  
Sbjct: 717 ARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAA 776

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                   +    +   M A+G    + ++ TLV  + + G+  + ++ L          
Sbjct: 777 GCSNSGDLQQALFITEEMIARG-YAIISSFNTLVHGFCKRGKLQETVKFLH--------- 826

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV-LQYMKENGLKPDVVTYTTLM---- 633
             VM    + PS L + +++   GE  + +EA  + ++  ++N    D    ++L     
Sbjct: 827 --VMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMI 884

Query: 634 -KALIRVDKFHKVFSSY 649
            + L+ +D  H +  S+
Sbjct: 885 NQGLVPLDVIHNMIQSH 901



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 159/372 (42%), Gaps = 46/372 (12%)

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR  +   V   +K+ GL P  +  N LLK  ++   L     V   ME +G+ PD +T
Sbjct: 186 TGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYT 245

Query: 373 YSLLIDAYANAGRWESARIVL-----------------------------------KEME 397
           YS LI+AY      ESA+ V+                                   KEME
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+ F Y  I+ G   RG   +   +L EM  +G+ P+   Y+ +ID F +     
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A      M + G++P+ IT++ LI    K GR  RA  + ++M + GY   T TYN++I
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                Q   E+   LL  MR  G+ PNV TY+ +++   Q G            S++A  
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGE-----------SERASG 474

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M  DGLKP+      LI+ +  +   + A   L+ M    L PD+  Y +L+  L 
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534

Query: 638 RVDKFHKVFSSY 649
            V K  +    Y
Sbjct: 535 NVGKMDEAIEYY 546



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 24/225 (10%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +V++DT+ K   +         M   G+ P     N L+    +    D   ++   M+ 
Sbjct: 177 DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG 236

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P   TY+ +I    +    E  K+++  MR  G   NVVTY TL+    ++G  ++
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 564 AIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A                          C  G  DQA      M   GL P+ +  ++LI+
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            F       EAF +++ M   G++P+ +TY  L++ L ++ +  +
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGR 401



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 36/231 (15%)

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +H A++  D    +G  P  +  + L+D + K GR     E+   M++ G  P     N 
Sbjct: 160 VHRALSGSD----QGRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNG 213

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           ++  L   +  + + ++ G M   G+ P+V TY+TL++ Y +    + A +         
Sbjct: 214 LLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETG 273

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G  ++A    + M   GL P      ++IN   +  R  +A 
Sbjct: 274 CSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAK 333

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            +L  M   GL P+VV Y+TL      +D F +  ++   F I K +S +G
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTL------IDGFMRQGNADEAFKIVKEMSAAG 378


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 212/451 (47%), Gaps = 13/451 (2%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  + N LI+   R + ++ A+++  KM + G   D I ++ +I  +    KI  ++  +
Sbjct: 127 TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAV--E 184

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           LY E+     E D    N +I G   +G+ + A+      +  G  P   TY  +I +L 
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                 +A     E+   G+ P    YN+++ G   +G L +A  +   ME++G  PD  
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+++ID+         A   L EM      P+   Y+ IL G    G+     ++ K+M
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G +PD   YN +ID+  K   ++ AM     M+  GI P+ +T++T++      G+ 
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A +LF+EM  R   P T T++I+++ L ++    + + +   M  +G+ PN+ TY  L
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++ Y           CL    ++A   F +M   G  P   + N LIN +   +R  +A 
Sbjct: 485 MNGY-----------CLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A+L  M    L P+ VTY T+MK L  V + 
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 224/478 (46%), Gaps = 18/478 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L   G +      F   ++    P  +TYN +I +  ++  +  A++ +S+M 
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ ++  L    +++ +   +L+K +E +  + D    N +I    K   
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEA--TRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A  FL      G+ P   TY  ++  L   G+  EA  +F+++++ G KP   AYN 
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K   + DA   +SEM   G+ P+  TYS ++  + N G+ + A  + KEM   +
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  +S ++ G    G       V + M   GVEP+ + YN +++ +     ++ A 
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ M+ +G  PD  ++N LI+ +    R D+A+ L  +M  +   P T TYN ++  L
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               R  D + L   M + G+LP ++TY+ L++   + G  D+A++            F+
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK-----------LFK 607

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            M+   L+P  +    LI       +   A  +   +  +G++P   TY  ++K L++
Sbjct: 608 SMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLK 665



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 11/313 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+     + N L+    ++ ++  A  V  +M + G+ PD  T++ LI+   N G+ + A
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  EM  S  +P+   Y+ ++ G  + G       V K+M+ +G +P+   YN +ID+
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   ++ AM     M+  GI PD IT+N+++      G+ + A  LF+ M++ G  P 
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI+I+ L +     D    L  M  QG+ P+VVTYTT+  ++G          C  
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI--LHGL---------CYL 351

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  ++A+  F+ M   G KP  +A N++I++  +D+   +A   L  M + G+ P+ VTY
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 630 TTLMKALIRVDKF 642
           +T++     + + 
Sbjct: 412 STILHGFCNLGQL 424


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 244/513 (47%), Gaps = 21/513 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S + LA AV+  + K  L Y  +++  S L++     +++ EA  L  +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +       +T+N LI     ++   +A+ L+ +M   G   D   Y  V+  L +   
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +L   L K++E  KIE D  +   +I       + + A+         G+ P   TY
Sbjct: 236 IDLAL--SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I  L N GR  +A  +  ++ E  + P    ++AL+  +VK G L +AE +  EM +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TYS LI+ +    R + A+ + + M      PN   Y+ ++ G+      + 
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  +T  YN +I    +      A   F +M+S+G+ PD IT++ L+D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+ ++A  +FE +Q+    P   TYNIMI  + +  + ED   L  ++  +G+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV+ YTT++  +           C +GL ++A   FR M+ DG  P++   N+LI A   
Sbjct: 534 NVIIYTTMISGF-----------CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           D   A +  +++ M+  G   D  T + ++  L
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINML 615



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 212/468 (45%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN LI+   R   L  AL ++ KM + GY  D +  S ++       +I  ++   L  
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV--ALVD 174

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++   + + +    N +I G      AS+A+  +      G  P   TY  V+  L   G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++ +++++  ++     Y  ++        + DA  + +EM+  G+ P+  TY+
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    N GRW  A  +L +M      PN   +S ++  +   G+     ++  EM   
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            ++PD   Y+ +I+ F  ++ L  A   F+ M+S+   P+ +T+NTLI    K  R +  
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF EM +RG    T TYN +I  L +    +  +++   M + G+ P+++TY+ L+D 
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474

Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
             + G+ + A+                         C  G  +   + F  +   G+KP+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +   ++I+ F       EA A+ + MKE+G  P+  TY TL++A +R
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 217/460 (47%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + +N L+SA A+ +  +  ++L  +M+      D  +Y+++I    R ++
Sbjct: 71  MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +L  L K+ K       E D   L+ ++ G+      S+A+  +     +   P T 
Sbjct: 131 LPLALAVLGKMMKL----GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + +   G +P    Y  ++ G  K G +  A  ++ +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+  +  D   Y+ +IDA  N      A  +  EM+    +PN   Y+ ++    + G W
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++L +M    + P+   ++ +ID F K   L  A   +D M+   I+PD  T+++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+      R D A+ +FE M  +  FP   TYN +I    + +R E+   L   M  +GL
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + N VTY TL+    Q+G      +C     D A   F+ M +DG+ P  +  + L++  
Sbjct: 427 VGNTVTYNTLIQGLFQAG------DC-----DMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +  +  +A  V +Y++++ ++PD+ TY  +++ + +  K
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 201/449 (44%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A++L  +M Q       + ++ ++ ++ + NK D  L+  L + ++  +I  D    
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD--LVISLGERMQNLRISYDLYSY 118

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F +      A+  LG    +G  P   T ++++    +  R  EA A+ +++  
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
              +P T  +N L+ G        +A  ++  M   G  PD  TY  +++     G  + 
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+ME    + +  IY+ I+    +         +  EM + G+ P+   YN +I 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I P+ +T++ LID   K G+   AE+L++EM +R   P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ +IN     +R ++ K +   M ++   PNVVTY TL+  + ++ R ++ +E  
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-- 416

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +  N+LI    +      A  + + M  +G+ PD++T
Sbjct: 417 ---------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y+ L+  L +  K  K    + +    KM
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKM 496


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 244/513 (47%), Gaps = 21/513 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S + LA AV+  + K  L Y  +++  S L++     +++ EA  L  +
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 159

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +       +T+N LI     ++   +A+ L+ +M   G   D   Y  V+  L +   
Sbjct: 160 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 219

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +L   L K++E  KIE D  +   +I       + + A+         G+ P   TY
Sbjct: 220 IDLAL--SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I  L N GR  +A  +  ++ E  + P    ++AL+  +VK G L +AE +  EM +
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TYS LI+ +    R + A+ + + M      PN   Y+ ++ G+      + 
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  +T  YN +I    +      A   F +M+S+G+ PD IT++ L+D
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+ ++A  +FE +Q+    P   TYNIMI  + +  + ED   L  ++  +G+ P
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV+ YTT++  +           C +GL ++A   FR M+ DG  P++   N+LI A   
Sbjct: 518 NVIIYTTMISGF-----------CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 566

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           D   A +  +++ M+  G   D  T + ++  L
Sbjct: 567 DGDKAASAELIKEMRSCGFVGDASTISMVINML 599



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 212/468 (45%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN LI+   R   L  AL ++ KM + GY  D +  S ++       +I  ++   L  
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV--ALVD 158

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++   + + +    N +I G      AS+A+  +      G  P   TY  V+  L   G
Sbjct: 159 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++ +++++  ++     Y  ++        + DA  + +EM+  G+ P+  TY+
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    N GRW  A  +L +M      PN   +S ++  +   G+     ++  EM   
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            ++PD   Y+ +I+ F  ++ L  A   F+ M+S+   P+ +T+NTLI    K  R +  
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF EM +RG    T TYN +I  L +    +  +++   M + G+ P+++TY+ L+D 
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458

Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
             + G+ + A+                         C  G  +   + F  +   G+KP+
Sbjct: 459 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 518

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +   ++I+ F       EA A+ + MKE+G  P+  TY TL++A +R
Sbjct: 519 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 566



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 217/460 (47%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + +N L+SA A+ +  +  ++L  +M+      D  +Y+++I    R ++
Sbjct: 55  MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 114

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +L  L K+ K       E D   L+ ++ G+      S+A+  +     +   P T 
Sbjct: 115 LPLALAVLGKMMKL----GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + +   G +P    Y  ++ G  K G +  A  ++ +M
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+  +  D   Y+ +IDA  N      A  +  EM+    +PN   Y+ ++    + G W
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++L +M    + P+   ++ +ID F K   L  A   +D M+   I+PD  T+++L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+      R D A+ +FE M  +  FP   TYN +I    + +R E+   L   M  +GL
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + N VTY TL+    Q+G      +C     D A   F+ M +DG+ P  +  + L++  
Sbjct: 411 VGNTVTYNTLIQGLFQAG------DC-----DMAQKIFKKMVSDGVPPDIITYSILLDGL 459

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +  +  +A  V +Y++++ ++PD+ TY  +++ + +  K
Sbjct: 460 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 201/449 (44%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A++L  +M Q       + ++ ++ ++ + NK D  L+  L + ++  +I  D    
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD--LVISLGERMQNLRISYDLYSY 102

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F +      A+  LG    +G  P   T ++++    +  R  EA A+ +++  
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
              +P T  +N L+ G        +A  ++  M   G  PD  TY  +++     G  + 
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+ME    + +  IY+ I+    +         +  EM + G+ P+   YN +I 
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I P+ +T++ LID   K G+   AE+L++EM +R   P
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ +IN     +R ++ K +   M ++   PNVVTY TL+  + ++ R ++ +E  
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-- 400

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +  N+LI    +      A  + + M  +G+ PD++T
Sbjct: 401 ---------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y+ L+  L +  K  K    + +    KM
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKM 480


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 215/459 (46%), Gaps = 17/459 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YN +I    +  D+ KA +L  +M Q G   D + Y+ V+ +L +   +D +  +   
Sbjct: 233 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA--EAFL 290

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++   ++  +    N++I G++  G   +A+R     +   + P   T + ++ +L   
Sbjct: 291 RQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 350

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  VF+ +   G  P   +YN +L GY   G L D   +   M   G+ PD +T+
Sbjct: 351 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI AYAN G  + A I+  EM     KP+   Y  ++A     G+     +   +M  
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD + YN +I  F  +  L  A      +++ G+  D + ++++I+   K GR   
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +F+     G  P    Y+++++      + E   R+   M + G+ PNVV Y TLV+
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y + GR D      EGLS      FR M   G+KPS +  + +I+   +  R   A   
Sbjct: 591 GYCKIGRID------EGLS-----LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              M E+G+  D+ TY  +++ L +    ++ F   +F 
Sbjct: 640 FHEMTESGIAMDICTYNIVLRGLFK----NRCFDEAIFL 674



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 222/493 (45%), Gaps = 23/493 (4%)

Query: 166 YSILIHALGRSEK--LYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           Y+IL+    R+ +  L  AF   LL    R+  +  N L+         ++AL+ L+ + 
Sbjct: 127 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRT 186

Query: 220 RQDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            + G   D  +YS++++SL    ++ + D  L         C     +    N VI GF 
Sbjct: 187 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP---NVVAYNTVIDGFF 243

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K GD +KA          G+ P   TY +V+ AL  +    +AEA   ++    + P   
Sbjct: 244 KEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW 303

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+ GY   G  K+A  V  EM R  +LPD  T S+L+ +    G+ + AR V   M
Sbjct: 304 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 363

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    P+ F Y+ +L GY  +G       +   M   G+ PD + +NV+I  +     L
Sbjct: 364 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  F+ M   G++PD +T+ T+I    + G+ D A E F +M ++G  P    YN +
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I            K L+  +   G+  ++V ++++++   + GR  DA    + + D  V
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDA----QNIFDLTV 539

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N        GL P  +  + L++ +    +  +A  V   M   G++P+VV Y TL+   
Sbjct: 540 NV-------GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592

Query: 637 IRVDKFHKVFSSY 649
            ++ +  +  S +
Sbjct: 593 CKIGRIDEGLSLF 605



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 251/571 (43%), Gaps = 79/571 (13%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQK----------HNLCYSYELLYSIL 169
           R +P  L  ++S++  LC + + +D A A +  +            +NL Y Y       
Sbjct: 261 RGIPPDLVTYNSVVHALCKARA-MDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS------ 313

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
             + G+ ++    F   +R  + P  +T + L+ +  +   +++A ++   M   G + D
Sbjct: 314 --STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 228 FINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             +Y++++    T+   +D   +  L+  +  D I  D    N +I  +A  G   KAM 
Sbjct: 372 VFSYNIMLNGYATKGCLVD---MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +  G+ P   TY  VI AL   G+  +A   F ++ + G+ P   AYN L++G+ 
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L  A+ ++SE+  +G+  D   +S +I+     GR   A+ +          P++ 
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +YS ++ GY   G+ ++  +V   M S+G+EP+   Y  +++ + K   +   ++ F  M
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI----------- 515
           L  GI+P TI ++ +ID  F+ GR   A+  F EM E G      TYNI           
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCF 668

Query: 516 ------------------------MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
                                   MI+ + +  R E+ K L  ++    L+PNVVTY+ +
Sbjct: 669 DEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIM 728

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +          + I+  EGL ++A + F  M+  G +P++  LN ++    +      A 
Sbjct: 729 I---------TNLIK--EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAG 777

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A L  + E     + +T      A++ VD F
Sbjct: 778 AYLSKIDERNFSLEHLT------AMLLVDLF 802



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      N LL+G+ +     +A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIYSRIL 412
           + ++      G +PD  +YS+L+ +  + G+   A  +L+ M    A   PN   Y+ ++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   YN ++    K   +  A A   +M+++ + 
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LI  +   G++  A  +F+EM+     P   T ++++  L +  + ++ + +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +Y  +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPDFY 408

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KPDVVTY T++ AL R+ K       +
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 465



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 156/373 (41%), Gaps = 7/373 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I AL R  K+ +A      ++ Q        YN LI     +  L KA  L+S++ 
Sbjct: 445 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIM 504

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G H D + +S +I +L +  ++  +  Q ++       +  D  + + ++ G+   G 
Sbjct: 505 NNGMHLDIVFFSSIINNLCKLGRVMDA--QNIFDLTVNVGLHPDAVVYSMLMDGYCLVGK 562

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+R        G+ P    Y  ++      GR  E  ++F E+ + G+KP T  Y+ 
Sbjct: 563 MEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSI 622

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  + G    A+    EM  SG+  D  TY++++        ++ A  + KE+   +
Sbjct: 623 IIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN 682

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K N    + ++ G       +    +   +  S + P+   Y++MI    K   +  A 
Sbjct: 683 VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAE 742

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M + G EP++   N ++    K     RA     ++ ER +     T  ++++L 
Sbjct: 743 DMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802

Query: 521 GEQERWEDVKRLL 533
             +    +  R L
Sbjct: 803 SSKGTCREQIRFL 815


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 239/533 (44%), Gaps = 28/533 (5%)

Query: 120 SYRAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
           S + +P P+   + L+K LCS     D A  V + L       +  + Y+ +++   R+ 
Sbjct: 90  SGKCLPLPVVPCNILIKRLCSGGRVAD-AERVFATLGAS----ATVVTYNTMVNGYCRAG 144

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           ++ +A  L       P   T+N LI A      +  AL +   M   G     + YS+++
Sbjct: 145 RIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILL 204

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
            +  + +    +++  L  E+     E D    N +I      GD  +A+  L      G
Sbjct: 205 DATCKASGYRQAMV--LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   TY  V+ +L  S R  E E +F E+  +   P    +N ++    + G +  A 
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            VV  M   G +PD  TYS ++D   + GR + A  +L  ++    KP++  Y+ +L G 
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
               +W+   +++ EM  S   PD   +N +I +  +   +  A+   ++M   G  PD 
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDI 442

Query: 476 ITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +T+N++ID  C+ +C   D A EL   +Q  G  P   T+N ++  L   +RWED ++L+
Sbjct: 443 VTYNSIIDGLCNERC--IDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLM 500

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            NM      P+  T+ T++              C +GL  QA+   ++M  +G  P+   
Sbjct: 501 VNMMHSDCPPDATTFNTVITSL-----------CQKGLLLQAIETLKIMAENGCIPNQST 549

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            N +++A  +  +  EA  +L  M  NG  PD++TY T++  + +  K  +  
Sbjct: 550 YNIVVDALLKAGKTQEALKLLSGMT-NG-TPDLITYNTVISNITKAGKMEEAL 600



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 234/523 (44%), Gaps = 57/523 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ L++ LC      D A AV   +  H  C    + YSIL+ A  ++    +A +L   
Sbjct: 165 FNPLIRALCVRGRVPD-ALAVFDDML-HRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R     P  +TYN LI+A     D+++ALN++S +   G   D + Y+ V++SL  + +
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                    +KE+E    EL                       F  MA     +P   T+
Sbjct: 283 ---------WKEVE----EL-----------------------FAEMASN-KCAPDEVTF 305

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++T+L   G    A  V + + E G  P    Y+++L G   +G + DA  ++S ++ 
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD   Y+ ++    +  +WE A  ++ EM  S   P+   ++ ++A    +G   R
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +V+++M  +G  PD   YN +ID      C+  AM     + S G +PD +T+NTL+ 
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                 R++ AE+L   M      P  TT+N +I  L ++         L  M   G +P
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N  TY  +VD   ++G+  +A++ L G+            T+G  P  +  N++I+   +
Sbjct: 546 NQSTYNIVVDALLKAGKTQEALKLLSGM------------TNG-TPDLITYNTVISNITK 592

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             +  EA  +L+ M  NGL PD +TY +L   + R D   +  
Sbjct: 593 AGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 199/448 (44%), Gaps = 10/448 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE--- 181
           P  + +++L N   +   +D A  ++S L  H  C    + Y+ ++ +L  SE+  E   
Sbjct: 230 PDIVTYNVLINAMCNEGDVDEALNILSDLPSHG-CKPDAVTYTPVLKSLCGSERWKEVEE 288

Query: 182 --AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             A + S +     +T+N ++++  +   +++A+ ++  M + G   D + YS ++  L 
Sbjct: 289 LFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLC 348

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
              ++D ++  +L   ++    + D      V+ G         A   +         P 
Sbjct: 349 DVGRVDDAV--ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  VI +L   G    A  V E++ E+G  P    YN+++ G      + DA  ++S
Sbjct: 407 EVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLS 466

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            ++  G  PD  T++ L+    +  RWE A  ++  M  S   P++  ++ ++     +G
Sbjct: 467 NLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG 526

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
              +  + LK M  +G  P+   YN+++D   K      A+     M +    PD IT+N
Sbjct: 527 LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYN 584

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           T+I    K G+ + A +L   M   G  P T TY  +   +  ++  +   R+L  ++  
Sbjct: 585 TVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDM 644

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           GL P+   Y  ++  + Q+ R D AI+C
Sbjct: 645 GLSPDATFYNDILLGFCQNWRTDIAIDC 672



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 11/258 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLS 186
           ++S++  LC+    ID A  ++S LQ +  C    + ++ L+  L   ++  +A   +++
Sbjct: 445 YNSIIDGLCNERC-IDDAMELLSNLQSYG-CKPDIVTFNTLLKGLCSVDRWEDAEQLMVN 502

Query: 187 QRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 P    T+N +I++  +   L +A+  +  M ++G   +   Y++V+ +L +  K
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGK 562

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +L  KL   +     +L     N VI    KAG   +A+  L +    GLSP T TY
Sbjct: 563 TQEAL--KLLSGMTNGTPDL--ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITY 618

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++   +     T  A  +   L++ GL P    YN +L G+ +      A    + M  
Sbjct: 619 RSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVS 678

Query: 364 SGVLPDEHTYSLLIDAYA 381
           SG +PDE TY +L++A A
Sbjct: 679 SGCMPDESTYIILLEALA 696


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 245/551 (44%), Gaps = 67/551 (12%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSY----------ELLYSILIHA--LGRSEKLYEAFLLSQ 187
           NS +++   +  +   H L Y+Y          ++ + +L+    L  + KL +  LLS 
Sbjct: 163 NSKLEIGVKMTQF--THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDK-LLSY 219

Query: 188 RQRLTPLTYNALISACARNDD-LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              +T  + NA +S  A N + +E A+ +  +    G   +  +Y+++I SL R  K+  
Sbjct: 220 GLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKE 276

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   +L  +++      D    + VI G+   G+  KA++ +   Q  GL P   TY ++
Sbjct: 277 A--HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSI 334

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA------------ 354
           I  L   G++ EAE V  E+    + P    Y  L+ G+ K+G+++ A            
Sbjct: 335 ILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKI 394

Query: 355 -----------------------EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
                                  + +  EM   G+ PDE TY+ LID Y  AG   +A  
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS 454

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  EM      PN   Y  ++ G    GE     ++L EM+  G++ +   YN M++   
Sbjct: 455 LHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A+     M   GI+PD IT+ T+ID + + G  D+A +L +EM +RG  P   
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+N+++N        ED  RLLG M  +G++P+ +TY TL+  +           C+   
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH-----------CIRNS 623

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            +     ++ MR  G+ P +   N LI    + +   EA+ + + M E G  P V +Y  
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNA 683

Query: 632 LMKALIRVDKF 642
           L+K   +  K 
Sbjct: 684 LIKRFYKKKKI 694



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 182/380 (47%), Gaps = 18/380 (4%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKP 333
             + G  S+A + L      GL     +  A ++ ++N+   IE A  VF    E G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF---CEYGISW 256

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T +YN ++    ++G +K+A  ++ +M+     PD  +YS +ID Y + G  + A  ++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M++   KPN + Y+ I+      G+     +VL+EM S  + PD   Y  +I  F K 
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A   FD MLS+ I PD IT+ TLI    + G+    + LF EM  RG  P   TY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +I++  +     +   L   M   G+ PN+VTY  L+D   + G  D A E L+    
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDE--- 493

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   MR  GL+ +    NS++N   +     +A  +++ M+  G+ PD +TYTT++
Sbjct: 494 --------MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 634 KALIR---VDKFHKVFSSYL 650
            A  R   +DK HK+    L
Sbjct: 546 DAYCRLGDIDKAHKLLQEML 565



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 193/411 (46%), Gaps = 8/411 (1%)

Query: 168 ILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           +L+  +G+S +  +       Q++ P  + Y  LI    +   +  A     +M      
Sbjct: 336 LLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKIS 395

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            D+I Y+ +IQ   +  K+     Q L+ E+    ++ D      +I  + KAG+   A 
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEP--QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                   +G++P   TY A+I  L   G    A  + +E+++ GL+     YN+++ G 
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K G ++ A  ++ EME +G+ PD  TY+ +IDAY   G  + A  +L+EM     +P  
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             ++ ++ G+   G  +   ++L  M   G+ PD   YN ++      N ++     + R
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M ++G+ PD+ T+N LI  H K      A  L++EM E+GY P  T+YN +I    ++++
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKK 693

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
             + + L   MR  GL+ +   Y   VD+  + G     +E    L D+A+
Sbjct: 694 ILEARELFEEMRGHGLVADGEIYNFFVDMCYEEG----DVEITLNLCDEAI 740



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 159/344 (46%), Gaps = 7/344 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI   G+  K+ E       ++S+  +   +TY  LI    +  ++  A +L ++M 
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y  +I  L +  ++D++   +L  E+    ++L+  + N ++ G  KAG+
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTA--NELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A++ +   +  G+ P   TY  VI A    G   +A  + +E+ + GL+P    +N 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+  +G L+D + ++  M   G++PD  TY+ L+  +       +   + K M    
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+S  Y+ ++ G+      +  + + KEM   G  P    YN +I  F K   +  A 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
             F+ M   G+  D   +N  +D  ++ G  +    L +E  E+
Sbjct: 699 ELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 226/466 (48%), Gaps = 14/466 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L YNA++ A + +  L  A  L++ M +DG   +   Y++++++L    + + +L   + 
Sbjct: 121 LAYNAVLLALS-DASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEAL-GVVG 178

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++       +    N ++  F +AG+   A R +G+ +  G+ P   T+  V+  L  +
Sbjct: 179 DDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKA 238

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +A  +F+E+   GL P   +YN L+ GY K G L +A  V +EM + GV+PD  T+
Sbjct: 239 GRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF 298

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI A   AG  E A  ++ +M     + N F ++ ++ G+   G        +KEM+ 
Sbjct: 299 TSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRE 358

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             ++P    YNV+I+ + K   +  A      M ++G++PD +T++T++  + K G  D 
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL  +M ++G  P   TY+ +I  L E+ R  D   L   M   GL P+  TYTTL+D
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            +           C EG   +A++    M   G+ P  +  + LI+   +  R  EA  +
Sbjct: 479 GH-----------CKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLS 659
           L  +      PD + Y  LM    R  +F  V +    F++  +++
Sbjct: 528 LFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMN 572



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 158/318 (49%), Gaps = 13/318 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG-RWES 388
           G  P   AYNA+L   +    L  A  +++ M R GV P+ +TY++L+ A    G R E+
Sbjct: 115 GYAPSLLAYNAVLLA-LSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
             +V  +M  +   PN   Y+ ++A +   GE     +++  M+  GV P    +N +++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A   FD M  EG+ PD +++NTL+  + K G    A  +F EM ++G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+  +I+ +      E    L+G MR +GL  N  T+T L+D + ++G  DDA+   
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL-- 351

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                    A + MR   ++PS +  N LIN + +  R  EA  ++  M+  G+KPDVVT
Sbjct: 352 ---------AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVT 402

Query: 629 YTTLMKALIRVDKFHKVF 646
           Y+T++    ++      F
Sbjct: 403 YSTILSGYCKIGDTDSAF 420



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 225/500 (45%), Gaps = 57/500 (11%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+IL+ AL    +  EA  ++    R     P  +TYN L++A  R  +++ A  L+  M
Sbjct: 157 YNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM 216

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+ G     + ++ V+  L +  +++ +  +K++ E+  + +  DG   N ++ G+ KAG
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDA--RKMFDEMAREGLTPDGVSYNTLVSGYCKAG 274

Query: 280 DASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK------ 332
              +A+  F  MAQ  G+ P   T+ ++I A+  +G    A A+  +++E GL+      
Sbjct: 275 CLHEALAVFAEMAQK-GVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF 333

Query: 333 -----------------------------PRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
                                        P    YN L+ GY K+G + +A  ++ EME 
Sbjct: 334 TALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEA 393

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ PD  TYS ++  Y   G  +SA  + ++M      P++  YS ++ G  +      
Sbjct: 394 KGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGD 453

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ ++M   G++PD   Y  +ID   K   +  A++  D M+ +G+ PD +T++ LID
Sbjct: 454 ACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLID 513

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K  R   A+ L  ++      P    Y  +++     E ++ V  LL     +GL+ 
Sbjct: 514 GLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAE-FKSVVALLKGFSMKGLMN 572

Query: 544 NV-VTYTTLVDIYGQSGRFDDAI-------ECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
                Y +++D   +  + D ++        C  G   +A++  + +   G  P++ +  
Sbjct: 573 QADKVYQSMLD---RHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629

Query: 596 SLINAFGEDQRDAEAFAVLQ 615
           SL+    E+    EA  V+Q
Sbjct: 630 SLVRGLFEEGMTVEADNVIQ 649



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 38/387 (9%)

Query: 84  FTPLLNFLSENSNSESASALASS--PSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           FT L++ +    N E A AL        L   EF             + +L+   C  N 
Sbjct: 298 FTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT------------FTALIDGFCR-NG 344

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTY 196
            +D A   +  +++  +  S  + Y++LI+    LGR ++  E     + + + P  +TY
Sbjct: 345 FLDDALLAMKEMRECRIQPSV-VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTY 403

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + ++S   +  D + A  L  KM + G   D I YS +I+ L    ++  +   +L++++
Sbjct: 404 STILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC--ELFEKM 461

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               ++ D      +I G  K G+  KA+         G+ P   TY+ +I  LS S RT
Sbjct: 462 LQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSART 521

Query: 317 IEAEAV---------------FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            EA+ +               +E L         K+  ALLKG+   G +  A+ V   M
Sbjct: 522 KEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSM 581

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
                  D   YS+LI  +   G    A    K++      PNS     ++ G  + G  
Sbjct: 582 LDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMT 641

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMID 448
                V++E+ +     D      +ID
Sbjct: 642 VEADNVIQELLNCCSLADAETSKALID 668


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 235/512 (45%), Gaps = 34/512 (6%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +  Y  LI+ L ++ ++  A  L Q   +  + P  + Y+ALI    ++  +  AL L S
Sbjct: 160 QFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCS 219

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           ++ + G   D + Y+ +I       +    + LL K+ +E     ++ D    N +I   
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE----NVDPDDYTFNILIDAL 275

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K G   +A   L M    G  P   TY A++    +     EA  +F  + + GL+P  
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ GY K   + +A  +  E+    ++P   +Y+ LID   N+GR    + +L E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M  S   P+   Y+ ++      G       VL  M   GV+P+   YN M+D +   N 
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           ++ A   F+RM+  G+EPD + +N LI+ + K    D A  LF+EM+ +   P   +YN 
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI----ECLEGL 571
           +I+ L    R   V+ LL  M   G  P+V+TY  L+D + ++  FD AI    + +EG+
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI 575

Query: 572 -----SDQAV--------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                ++ A+              +A + +   G  P+      LINA  +D    EA  
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +L  M++N   PD +T+  ++  L++ ++  K
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDK 667



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 213/477 (44%), Gaps = 30/477 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK--IDSSLLQKL 252
            ++ L+ A  R      A++L ++++  G       ++++I      +      SLL  +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            K       + +    N +I GF   G   KA+ F       G      TY  +I  LS 
Sbjct: 117 LKS----GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G+   A  + +E+++S ++P    Y+AL+ G  K G++ DA  + S++   G+L D  T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LID   + GRW+    +L +M   +  P+ + ++ ++      G       VL  M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G +PD   YN +++ +     +H A   F+RM+  G+EPD + +N LID + K    D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  LF+E+  +   P   +YN +I+ L    R   VK+LL  M      P+VVTY  L+
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D   + GR  +A+                         CL    + A + F  M   GL+
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           P  L  N LIN + + +   EA  + + M+   L PD+ +Y +L+  L  + +   V
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 11/316 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A   F  +      P T  ++ LL   V+MG+   A  + ++++  G+ P   T+++LI
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + Y +      A  +L  +  S  +PN   ++ I+ G+   G   +     + + + G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D   Y  +I+   K   +  A+     M    ++P+ + ++ LID   K G    A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             ++ ERG      TYN +I+      RW++V +LL  M  + + P+  T+  L+D   +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR  +A         Q V A  +M   G KP  +  N+L+  +   +   EA  +   M
Sbjct: 278 EGRILEA---------QGVLA--MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 618 KENGLKPDVVTYTTLM 633
            + GL+PDV+ Y  L+
Sbjct: 327 VKRGLEPDVLNYNVLI 342



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  F+RM+     P T  ++ L+    + G Y  A  LF ++Q +G  P   T+ I+IN
Sbjct: 39  AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
               Q        LL  +   G  PN+VT+ T+++ +           C+ G+  +A++ 
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGF-----------CINGMIFKALDF 147

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + +   G         +LIN   ++ +   A  +LQ M+++ ++P++V Y+ L+  L +
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 238/533 (44%), Gaps = 31/533 (5%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----LLSQRQRLTPLT- 195
           S +     V S +   + C    L++ +LI +  ++ KL E      +L ++  L  +  
Sbjct: 93  SGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINA 152

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
            N+L+    +   ++ A  + +++ + G   +    ++++ +L + +KID   ++    +
Sbjct: 153 CNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDD--VKPFLID 210

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   I  D    N +I  + + G   +A   +    G GL P   TY AVI  L   GR
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A+ VF E+   GL P T  YN LL    +     +A+ + S+M   GV PD  ++S 
Sbjct: 271 YVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS 330

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI   +  G  + A +  ++M+ S   P++ IY+ ++ GY   G      ++  +M   G
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              D   YN +++   K   L  A A FD M+  G+ PD  T+ TLI  H K G   +A 
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            LF  M ++   P   TYNI+I+   +    E    L   M ++ + PN ++Y  LV+ Y
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510

Query: 556 GQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
              G   +A                          C  G   +A      M ++G+ P +
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  N+LIN F + +   +AF ++  M+  GL+PDVVTY  ++    R  +  +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQE 623



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 177/361 (49%), Gaps = 2/361 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN L+    RN++  +A ++ S M   G   D I++S +I   +R   +D +L+   ++
Sbjct: 292 TYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY--FR 349

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++   +  D  +   +I G+ + G  S+A+         G +     Y  ++  L    
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKK 409

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A A+F+E+ E G+ P    +  L+ G+ K G +  A  +   M +  + PD  TY+
Sbjct: 410 LLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYN 469

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID +      E A  +  EM      PN   Y+ ++ GY + G     F++  EM   
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK 529

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++P     N +I  + +   L  A     +M+SEG+ PD+IT+NTLI+   K    D+A
Sbjct: 530 GIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKA 589

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L  +M+ +G  P   TYN+++N    Q R ++ + +L  M  +G+ P+  TYTTL++ 
Sbjct: 590 FFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING 649

Query: 555 Y 555
           Y
Sbjct: 650 Y 650



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 223/503 (44%), Gaps = 28/503 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           ++  LC  +   D+   ++   QK    ++  + Y+ LI+A  R   L EAF     +  
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKG--IFADIVTYNTLINAYCREGLLGEAFEVMNSMSG 248

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY-SLVIQSLTRTNKID 245
           +  + T  TYNA+I+   +     +A  + ++M   G   D   Y +L+++S    N ++
Sbjct: 249 KGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLE 308

Query: 246 SSLL--QKLYKEIECDKIELDGQLLNDVIVGFA-KAGDASKAMRFLGMAQGVGLSPKTAT 302
           +  +    L++ +  D I          ++G + + G   +A+ +    +  GL P    
Sbjct: 309 AKDIFSDMLHRGVSPDLISFSS------LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVI 362

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I     +G   EA  + +++ E G      AYN +L G  K   L DA  +  EM 
Sbjct: 363 YTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMV 422

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV+PD  T++ LI  +   G    A  +   M   + KP+   Y+ ++ G+    E +
Sbjct: 423 ERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEME 482

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++  EM S  + P+   Y ++++ +     +  A   +D M+ +GI+P  +T NT+I
Sbjct: 483 KANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G   +A+E   +M   G  P + TYN +IN   + E  +    L+  M  +GL 
Sbjct: 543 KGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQ 602

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+VVTY  +++ + + GR  +A   L           R M   G+ P      +LIN + 
Sbjct: 603 PDVVTYNVILNGFCRQGRMQEAELIL-----------RKMIERGIDPDRSTYTTLINGYV 651

Query: 603 EDQRDAEAFAVLQYMKENGLKPD 625
                 EAF     M + G  PD
Sbjct: 652 SQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 11/332 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F+ L+  G      A N+LL G VKMG++  A  V +E+ RSG+  + +T ++++
Sbjct: 133 EGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMV 192

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     + +  +  L +ME      +   Y+ ++  Y   G     F+V+  M   G++
Sbjct: 193 NALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLK 252

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    YN +I+   K      A   F+ MLS G+ PDT T+NTL+    +   +  A+++
Sbjct: 253 PTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDI 312

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F +M  RG  P   +++ +I +       +       +M+  GL+P+ V YT L++ Y +
Sbjct: 313 FSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCR 372

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +G   +A+E  + + +Q           G     +A N+++N   + +  A+A A+   M
Sbjct: 373 NGMMSEALEIRDKMLEQ-----------GCALDVVAYNTILNGLCKKKLLADANALFDEM 421

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E G+ PD  T+TTL+    +     K  S +
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 154/333 (46%), Gaps = 8/333 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+  ++   VP  + +++L N    N  +  A  +   + +   C    + Y+ +++ L 
Sbjct: 348 FRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG-CALDVVAYNTILNGLC 406

Query: 175 RSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           + + L +A  L      + + P   T+  LI    +  ++ KAL+L   M Q     D +
Sbjct: 407 KKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIV 466

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I    +T +++ +   +L+ E+   KI  +      ++ G+   G  S+A R   
Sbjct: 467 TYNILIDGFCKTTEMEKA--NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWD 524

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G+ P   T   VI     SG   +A+    ++   G+ P +  YN L+ G+VK  
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
           Y+  A F++++ME  G+ PD  TY+++++ +   GR + A ++L++M      P+   Y+
Sbjct: 585 YMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYT 644

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            ++ GY  +   +  F+   EM   G  PD  F
Sbjct: 645 TLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 221/489 (45%), Gaps = 19/489 (3%)

Query: 161 SYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACA--RNDDLEKALNLMSK 218
           SY ++ S+L  A   ++ L     +  R R+ P T+   ++A A  R     +AL L+  
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRG 200

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   D + Y  VI +L     +  +    L  E+       D    +DV+ G    
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEA--ATLLNEMLLMGCAADVNTFDDVVRGMCGL 258

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A R +      G  P   TY  ++  L    +  EA A+   + E  +      +
Sbjct: 259 GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LF 314

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G +  G L +A  +   M   G  PD HTYS+L+      GR  SA  +L+EME 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ +L  +   G W  T  +L+EM + G+  ++  YN MI    K   +  
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM     M S+G  PD  ++NT+I       + + AE +FE + E G      TYN +I+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW+D  RL   M   G   +VV+Y  L+    + G  D ++  LE ++++    
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK---- 550

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G+KP+N++ N LI+   +++R  +A  + + M   GL PD+VTY TL+  L +
Sbjct: 551 -------GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 639 VDKFHKVFS 647
           +   H   +
Sbjct: 604 MGWMHAALN 612



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 175/397 (44%), Gaps = 13/397 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C    + Y  L+  L R  +  EA  +L +   L  + +N +I  C     L +A  L  
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   YS+++  L +  +I S++  +L +E+E      +      V+  F K
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRISSAV--RLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G        L      GL+  +  Y  +I AL   GR  EA  + +E++  G  P   +
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++        +++AE +   +   GV+ +  TY+ +I A    GRW+ A  + KEM 
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +     +   Y+ ++      G   R+  +L+EM   G++P+   YN++I    K   + 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+    +ML++G+ PD +T+NTLI+   K G    A  L E++      P   TYNI+I
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 518 NLLGEQERWEDVKRLL----------GNMRAQGLLPN 544
           +   +    +D   LL          G+ R   +LP+
Sbjct: 634 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 187/453 (41%), Gaps = 35/453 (7%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALI 200
           A A++  + +H  C    +LY  +IHAL     + EA  L     L        T++ ++
Sbjct: 194 ALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK------- 251
                   + +A  L+ +M   G     + Y  ++Q L R  + D +  +L +       
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312

Query: 252 --------------------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
                               LY+ +     + D    + ++ G  K G  S A+R L   
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G +P   TY  V+ +   +G   +  A+ EE+   GL   ++ YN ++    K G +
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  ++ EM   G  PD  +Y+ +I    N  + E A  + + +       N   Y+ I
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G WQ   ++ KEM   G   D   YN +I    K   +  ++   + M  +GI
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +P+ +++N LI    K  R   A EL ++M  +G  P   TYN +IN L +         
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           LL  +  + + P+++TY  L+  + +    DDA
Sbjct: 613 LLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 216/458 (47%), Gaps = 20/458 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQK 251
           + +  L SA  R    +  ++L  +M   G   D ++ +++I    R   +D   S+L K
Sbjct: 92  VKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGK 151

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + K      +E +    + +I GF   G   +A+    +    G  P   +Y+ +I  L 
Sbjct: 152 IIKL----GLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC 207

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G+T E   + E +K  G +P    YN ++    K   + +A  +  +M+ +G+LP   
Sbjct: 208 RVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVV 267

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ LI    N GRW+ A  +L EM+  +  P+   +S ++      GE      +LK M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              GVEPD   YN +++ +     +  A   F+ M+S+G  PD  +++ L++ + K  R 
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A++LF+EM  RG  P T +YN +I+ L +  R  + + L  +M + G  PN+VTY+ L
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D   + G  D           QA+  FR M   GLKP  +  N +I+   +  +  +A 
Sbjct: 448 LDCLSKQGYLD-----------QAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +   +   GL+P+    T  +  + +   +D+ HK F
Sbjct: 497 ELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAF 534



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 210/457 (45%), Gaps = 31/457 (6%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPLTYNAL-----ISACARNDDLEKALNLMSKMRQDG 223
           L  AL R +       LS++  +  ++++ L     I+   R   ++   +++ K+ + G
Sbjct: 97  LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              + I +S +I       KI  ++  +L+  +     + +    + +I G  + G  ++
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAI--ELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTE 214

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
            ++ L   + VG  P    Y  ++  L       EA  +F ++K +G+ P    Y +L+ 
Sbjct: 215 VIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIH 274

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G   +G  K+A  +++EM+   ++PD   +S+LID     G    AR++LK M     +P
Sbjct: 275 GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ ++ GY  R E     +V + M S G  PD   ++++++ + K   +  A   F
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLF 394

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           D M   G+ PDT+++NTLI    +  R   AEELF++M   GY P   TY+I+++ L +Q
Sbjct: 395 DEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQ 454

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------------- 566
              +    L   M   GL P++VTY  ++D   + G+F DA E                 
Sbjct: 455 GYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVC 514

Query: 567 -------CLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
                  C  GL D+A  AFR M  D   P+   +N 
Sbjct: 515 TPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 11/344 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  + +AL          ++ ++++ +G+     +   L+  + ++ ++     V
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + ++ + G+ P+  T+S LI+ +   G+   A  +   M     KPN   YS I+ G   
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+     ++L+ MK  G EPD   YN ++D   K   ++ A+  F +M   GI P  +T
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + +LI      GR+  A  L  EM+     P    ++++I+++ ++    + + +L  M 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G+ P+V TY TL++ Y           CL     +A   F VM + G  P   + + L
Sbjct: 329 EMGVEPDVATYNTLMNGY-----------CLRMEVVEARKVFEVMISKGRMPDVFSFSIL 377

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +N + + +R  EA  +   M   GL PD V+Y TL+  L +  +
Sbjct: 378 VNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           ++ A++AF+ M++    P  + +  L     +   Y     L ++M+  G      +  I
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +IN        +    +LG +   GL PNV+T++TL++ +           C+EG   +A
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGF-----------CIEGKIGRA 180

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +  F VM   G KP+  + + +I       +  E   +L++MK  G +PDVV Y T++  
Sbjct: 181 IELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDR 240

Query: 636 LIR 638
           L +
Sbjct: 241 LCK 243


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 227/484 (46%), Gaps = 18/484 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  + Q        P  +TYN+LISA AR+  LE AL L +
Sbjct: 306 KVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKN 365

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    +  K D + +Q +++E+  +  + +    N +I     
Sbjct: 366 QMVEKGIKPDVFTYTTLLSGFEKAGK-DKAAVQ-IFEEMRNEGCKPNICTFNALIKMHGN 423

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M+     +    SP   T+  +++    +G   E   VF+E+K +G  P    
Sbjct: 424 RGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDT 483

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G    A  V   M  +GV PD  +Y+ ++ A A  G W+ +  VL EM+
Sbjct: 484 FNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMK 543

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   Y  +L  Y +  E +R   + +E+ S  +EP       ++    K + L 
Sbjct: 544 DGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLM 603

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF  +   G  PD  T N ++  + +     +A E+ + M+  G+ P  TTYN ++
Sbjct: 604 ETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM 663

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +      +E  + +L  + A+G+ P++++Y T++  Y ++GR  DA   L         
Sbjct: 664 YMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSE------- 716

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               MR  G  P  +  N+ I ++  D    EA  V+ YM ++G KP+  TY +++    
Sbjct: 717 ----MRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYC 772

Query: 638 RVDK 641
           ++++
Sbjct: 773 KLNR 776



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 255/559 (45%), Gaps = 67/559 (11%)

Query: 131 SLLKNLCSSNSSIDL-AY---------------AVVSWLQKHNL-CYSYELLYSILIHAL 173
           SLL NLC     +D+ AY               AV+ + +   + C    + Y+++++  
Sbjct: 186 SLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVY 245

Query: 174 GRSEKLYEAFL-LSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           G+    +   + L  R +   + P   TYN LIS C R +  E+A  ++ +M+  G+  D
Sbjct: 246 GKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPD 305

Query: 228 FINYS--LVIQSLTRTNKIDSSLLQKL-----------YKEIEC---------DKIELDG 265
            + Y+  L +   +R +K    +LQ++           Y  +           D +EL  
Sbjct: 306 KVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKN 365

Query: 266 QLLND-----------VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           Q++             ++ GF KAG    A++     +  G  P   T+ A+I    N G
Sbjct: 366 QMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRG 425

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  E   VFE++K     P    +N LL  + + G   +   V  EM+R+G +P+  T++
Sbjct: 426 KFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 485

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI +Y+  G ++ A  V K M  +   P+   Y+ +LA     G W+++ +VL EMK  
Sbjct: 486 TLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDG 545

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
             +P+   Y  ++  +     +    A  + + S  IEP  +   TL+  + KC      
Sbjct: 546 RCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMET 605

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E  F E+++RG+ P  TT N M+++ G ++       +L  M+  G  P++ TY +L+ +
Sbjct: 606 ERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYM 665

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y +S  F+ + E L           R +   G++P  ++ N++I A+  + R  +A  VL
Sbjct: 666 YSRSANFERSEEIL-----------REILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 714

Query: 615 QYMKENGLKPDVVTYTTLM 633
             M+E+G  PD++TY T +
Sbjct: 715 SEMRESGPAPDIITYNTFI 733



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 214/473 (45%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y ++I+A   N    +A+ +  KM + G     I Y++++    +   +  + +  L   
Sbjct: 203 YTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMG-MPWNKMVGLVDR 261

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   I  D    N +I    +     +A   L   +  G SP   TY A++     S R
Sbjct: 262 MKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRR 321

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
           + EA  V +E++ +G  P    YN+L+  Y + G L+DA  + ++M   G+ PD  TY+ 
Sbjct: 322 SKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTT 381

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+  +  AG+ ++A  + +EM     KPN   ++ ++  + +RG++    +V +++K+  
Sbjct: 382 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 441

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+NTLI  + +CG +D+A 
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +++ M E G  P  ++YN ++  L     W+  +++L  M+     PN +TY +L+  Y
Sbjct: 502 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAY 561

Query: 556 GQSGRFDD----AIECLEGLSD--------------------QAVNAFRVMRTDGLKPSN 591
                 +     A E   G+ +                    +   AF  +R  G  P  
Sbjct: 562 ANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDI 621

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++++ +G  Q  A+A  +L  MK  G  P + TY +LM    R   F +
Sbjct: 622 TTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFER 674



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I+ L   GR   A ++   L + G      AY +++  +   G  ++A  V  +ME 
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W     ++  M+ +   P+S+ Y+ +++  R    ++
Sbjct: 229 VGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYE 288

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               VLKEMK +G  PD   YN ++D +GK      AM     M   G  P  +T+N+LI
Sbjct: 289 EAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLI 348

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G  + A EL  +M E+G  P   TY  +++   +  + +   ++   MR +G  
Sbjct: 349 SAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK 408

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  G+F + ++  E +           +T    P  +  N+L++ FG
Sbjct: 409 PNICTFNALIKMHGNRGKFTEMMKVFEDI-----------KTFQCSPDIVTWNTLLSVFG 457

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ +  R   F +  + Y
Sbjct: 458 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 142/303 (46%), Gaps = 8/303 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LIS+ +R    ++A+ +  +M + G + D  +Y+ V+ +L R      S  +K+  
Sbjct: 483 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQS--EKVLA 540

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---LSPKTATYAAVITALS 311
           E++  + + +      ++  +A   +  +  R   +A+ +    + P+      ++   S
Sbjct: 541 EMKDGRCKPNELTYCSLLHAYA---NGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNS 597

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                +E E  F EL++ G  P     NA++  Y +   +  A  ++  M+R G  P   
Sbjct: 598 KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLT 657

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L+  Y+ +  +E +  +L+E+     +P+   Y+ ++  Y   G  +   +VL EM
Sbjct: 658 TYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEM 717

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           + SG  PD   YN  I ++   +    A+     M+  G +P+  T+N+++D + K  R 
Sbjct: 718 RESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRR 777

Query: 492 DRA 494
           D A
Sbjct: 778 DEA 780



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 153/345 (44%), Gaps = 4/345 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N L+S   +N    +   +  +M++ G+  +   ++ +I S +R    D ++   +Y
Sbjct: 447 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM--AVY 504

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K +    +  D    N V+   A+ G   ++ + L   +     P   TY +++ A +N 
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYAN- 563

Query: 314 GRTIEAE-AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           G+ IE   A+ EE+    ++PR      L+    K   L + E    E+ + G  PD  T
Sbjct: 564 GKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITT 623

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            + ++  Y        A  +L  M+     P+   Y+ ++  Y     ++R+ ++L+E+ 
Sbjct: 624 LNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREIL 683

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ PD   YN +I  + +   +  A      M   G  PD IT+NT I  +     + 
Sbjct: 684 AKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFV 743

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            A ++   M + G  P  +TYN +++   +  R ++    + N+R
Sbjct: 744 EAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 788


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 224/485 (46%), Gaps = 18/485 (3%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+ +  +  K+ +   LLS+ QR    P  +TYN LI+  ++  + E+A  L+ +M 
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 296

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y+ +I        +  +L   L +E+            N  I G  K G 
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEAL--SLQEEMVLKGASPTVATYNSFIYGLCKLGR 354

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S AM+ L       L P   +Y  +I      G  ++A  +F+EL+   L P    YN 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  + G L+ A+ +  EM   G+ PD  TY++L++     G    A+    EM    
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + +S+ Y+  + G    G+  R F + +EM + G  PD   YNV++D   K   L  A 
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               +M+S+G+ PD +T+ ++I  H + GR  +  E+F EM  +G  P   TY ++I+  
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             + R E        M+ +G+LPNV+TY +L++   +  R            DQA N F 
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM-----------DQAYNFFA 643

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G+ P+  +   LIN         EA ++ + M + G++PD  T++ L+K L +  
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDC 703

Query: 641 KFHKV 645
           K   V
Sbjct: 704 KLQAV 708



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 215/464 (46%), Gaps = 15/464 (3%)

Query: 188 RQRLTPLTYNA-LISACARNDDL-EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           + RL+P   N   I    R+ DL  KA+ +   M + G     + Y+ ++ S  +  K+ 
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             L   L  E++      +    N +I G +K G+  +A   +G     GL     TY  
Sbjct: 252 QGL--DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I    N G   EA ++ EE+   G  P    YN+ + G  K+G + DA   +S+M  + 
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +LPD  +Y+ LI  Y   G    A ++  E+   +  P    Y+ +L G   +GE +   
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+  EM + G+ PD   Y ++++   K   L  A   FD ML EG+E D+  + T I   
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGE 489

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G   RA  L EEM  +G+ P    YN++++ L +    E+   LL  M + G++P+ 
Sbjct: 490 LKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTYT+++  + ++GR     E            F  M + GL PS +    LI+      
Sbjct: 550 VTYTSIIHAHLENGRLRKGRE-----------IFYEMLSKGLTPSVVTYTVLIHGHAGKG 598

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           R   AF     M+E G+ P+V+TY +L+  L +V +  + ++ +
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 35/429 (8%)

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           C   E+  ++L+ +I  ++K     + +          LSP       ++  L +     
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  V+  + E G+KP    YN LL  Y K G ++    ++SEM+R G  P++ TY++LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +  +  G +E A+ ++ EM  +  K +++ Y+ ++ GY ++G       + +EM   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    YN  I    K   +  AM     ML+  + PD +++NTLI  + + G   +A  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F+E++    FP   TYN +++ L  Q   E  ++L   M  +G+ P++VTYT LV+   +
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 558 SGRFDDAIECL-----EGLS-DQAVNAFRV------------------MRTDGLKPSNLA 593
            G    A E       EGL  D    A R+                  M   G  P  + 
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
            N +++   +     EA  +LQ M  +G+ PD VTYT+++ A +   R+ K  ++F    
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF---- 572

Query: 651 FFNIYKMLS 659
               Y+MLS
Sbjct: 573 ----YEMLS 577



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 202/464 (43%), Gaps = 11/464 (2%)

Query: 117 LAESYRAVPAP--LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           L+E  R   AP  + +++L N  S     + A  ++  + K  L  S    Y+ LI+   
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS-AYTYNPLIYGYF 315

Query: 175 RSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
               L EA  L +   L     T  TYN+ I    +   +  A+  +S M  +    D +
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +Y+ +I    R   +  + L  L+ E+    +       N ++ G  + G+   A +   
Sbjct: 376 SYNTLIYGYCRLGNLMKAFL--LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G++P   TY  ++      G    A+  F+E+   GL+  + AY   + G +K+G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
               A  +  EM   G  PD   Y++++D     G  E A  +L++M      P+   Y+
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            I+  + + G  ++  ++  EM S G+ P    Y V+I        L  A   F  M  +
Sbjct: 554 SIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P+ IT+N+LI+   K  R D+A   F EM E+G FP   +Y I+IN       W++ 
Sbjct: 614 GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEA 673

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             L   M  +G+ P+  T++ L+   G+  +   A+  LE L D
Sbjct: 674 LSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL-QAVRQLESLLD 716


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 230/480 (47%), Gaps = 37/480 (7%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
           AC R     +A  + ++M++ G     +  + ++ +L R     SS   +L K +  D I
Sbjct: 136 ACGRP---HQAAQIFNRMKRLGMQPTLLTCNTLLNALVR---FPSSHSIRLSKAVFTDFI 189

Query: 262 ELDGQL----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           ++  ++     N +I G        +A+R LG  +  G  P   TY  ++  L   GR  
Sbjct: 190 KIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLN 249

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +  ++K  GL P    +N L+ G  ++G+LK+A  V+  M ++ V+PD  TY+++I
Sbjct: 250 EARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMI 309

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             +   GR   A  + +EME     P+   Y+ ++ G  + G  +  F++++EM+  G++
Sbjct: 310 SGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMK 369

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P++  YNVM+  F K   +        +M   G  PD +T+NTLI  H K G+ D A  L
Sbjct: 370 PNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRL 429

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY-- 555
            +EM  +G      T N M+  L  + + ++   LL + R +G   + V+Y TL+  Y  
Sbjct: 430 MDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFK 489

Query: 556 ----GQSGRFDDAIE------------------CLEGLSDQAVNAFRVMRTDGLKPSNLA 593
                Q+ R  D ++                  C  G ++QA++    +   GL P  + 
Sbjct: 490 HEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEIT 549

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            N++I+ + ++ +  +AF     M E   KPDVVT  TL+  L +   ++K  K+F++++
Sbjct: 550 YNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI 609



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 213/466 (45%), Gaps = 26/466 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++N LI      +   +A+ ++ KMR  G   D I Y+ ++  L +  +++ +  + L  
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEA--RDLLL 256

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++   +  +    N ++VG  + G   +A   + +     + P   TY  +I+     G
Sbjct: 257 DMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQG 316

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  + EE++   L P    YN L+ G  + G  ++   ++ EME  G+ P+  TY+
Sbjct: 317 RIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYN 376

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +++  +   G+ +     +++ME S   P+   Y+ +++ +   G+    F+++ EM   
Sbjct: 377 VMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++ D    N M+    +   L  A          G   D +++ TLI  +FK  +  +A
Sbjct: 437 GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQA 496

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L++EM+E+   P   TYN MI  L +  +       L  +   GL+P+ +TY T++  
Sbjct: 497 LRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHG 556

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           Y Q G+ + A +                        C EG+ ++A+  F    + G    
Sbjct: 557 YCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVD 616

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            ++ N++I +  +++R  EAF +L+ M+E  L PD  TY  ++  L
Sbjct: 617 AVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 202/457 (44%), Gaps = 42/457 (9%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKAL 213
           C    + Y+ ++  L +  +L EA   LL  + + L P   T+N L+  C R   L++A 
Sbjct: 228 CPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAA 287

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           N++  M Q+    D   Y+++I    +  +I  ++  +L +E+E  K+  D    N +I 
Sbjct: 288 NVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM--RLREEMENLKLSPDVVTYNTLIN 345

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G + +  + +   +G G+ P + TY  ++      G+  E +    +++ESG  P
Sbjct: 346 GCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLP 405

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV--------------------------- 366
               YN L+  + K+G + +A  ++ EM R G+                           
Sbjct: 406 DIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL 465

Query: 367 --------LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
                     DE +Y  LI  Y    +   A  +  EM+     P+   Y+ ++AG    
Sbjct: 466 CSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQM 525

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  +    L E+  SG+ PD   YN +I  + +   +  A    ++M+ +  +PD +T 
Sbjct: 526 GKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTC 585

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NTL+    K G  ++A +LF     +G      +YN +I  L +++R+ +   LL  M  
Sbjct: 586 NTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           + L P+  TY  ++     +GR  DA E +  ++++ 
Sbjct: 646 KKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 180/426 (42%), Gaps = 30/426 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I    +  ++ EA  L +     +L+P  +TYN LI+ C  +   E+   L+ +M 
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+++++   +  K+D   + K  +++E      D    N +I    K G 
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDE--VDKTVRKMEESGCLPDIVTYNTLISWHCKVGK 422

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A R +      GL     T   ++ AL    +  EA  +    +  G      +Y  
Sbjct: 423 MDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGT 482

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K      A  +  EM+   ++P   TY+ +I      G+   A   L E+  S 
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESG 542

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ I+ GY   G+ ++ FQ   +M     +PD    N ++    K   L  A+
Sbjct: 543 LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKAL 602

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+  +S+G + D +++NT+I    K  R+  A +L EEM+E+   P   TYN ++  L
Sbjct: 603 KLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGL 662

Query: 521 GEQERWEDVKRLLGNMRAQGL-----------------------LPNVVTYTTLVDIYGQ 557
            +  R +D +  +  +  +G                         PN + Y+  ++    
Sbjct: 663 TDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCS 722

Query: 558 SGRFDD 563
            GR+ D
Sbjct: 723 QGRYKD 728



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 153/373 (41%), Gaps = 84/373 (22%)

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLP--------------------------------- 368
           +  YV  G    A  + + M+R G+ P                                 
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 369 -----DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                + +++++LI       R+  A  VL +M      P++  Y+ IL G   +G    
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 424 TFQVLKEMKSSG-----------------------------------VEPDTHFYNVMID 448
              +L +MK+ G                                   V PD   YNVMI 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            F K   +  AM   + M +  + PD +T+NTLI+  F+ G  +   +L EEM+ RG  P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            + TYN+M+    ++ + ++V + +  M   G LP++VTY TL+  + + G+ D+A    
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFR-- 428

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             L D+       M   GLK  ++ LN+++ A   +++  EA  +L   +  G   D V+
Sbjct: 429 --LMDE-------MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479

Query: 629 YTTLMKALIRVDK 641
           Y TL+    + +K
Sbjct: 480 YGTLIIGYFKHEK 492



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 114/289 (39%), Gaps = 42/289 (14%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKAL 213
           C    + Y+ LI    +  K+ EAF L         ++  +T N ++ A  R   L++A 
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAH 462

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L+   R+ GY  D ++Y  +I    +  K   +L  +L+ E++  +I       N +I 
Sbjct: 463 DLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL--RLWDEMKEKEIIPSIITYNSMIA 520

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G  ++A+  L      GL P   TY  +I      G+  +A     ++ E   KP
Sbjct: 521 GLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKP 580

Query: 334 RTKAYNALLKGYVKMGYL--------------KDAEFV---------------------V 358
                N LL G  K G L              KD + V                     +
Sbjct: 581 DVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            EME   + PD +TY+ ++    +AGR + A   + ++       N F+
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFL 689


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 222/489 (45%), Gaps = 19/489 (3%)

Query: 161 SYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACA--RNDDLEKALNLMSK 218
           SY ++ S+L  A   ++ L     +  R R+ P T+   ++A A  R    ++AL L+  
Sbjct: 141 SYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRG 200

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   D + Y  VI +L     +  +    L  E+       D    +DV+ G    
Sbjct: 201 MARHGCVPDAVLYQTVIHALCDQGGVTEA--ATLLNEMLLMGCAADVNTFDDVVRGMCGL 258

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A R +      G  P   TY  ++  L    +  EA A+   + E  +      +
Sbjct: 259 GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV----LF 314

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G +  G L +A  +   M   G  PD HTYS+L+      GR  SA  +L+EME 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ +L  +   G W  T  +L+EM + G+  ++  YN MI    K   +  
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM     M S+G  PD  ++NT+I       + + AE +FE + E G      TYN +I+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW+D  RL   M   G   +VV+Y  L+    + G  D ++  LE ++++    
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK---- 550

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G+KP+N++ N LI+   +++R  +A  + + M   GL PD+VTY TL+  L +
Sbjct: 551 -------GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 639 VDKFHKVFS 647
           +   H   +
Sbjct: 604 MGWMHAALN 612



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 175/397 (44%), Gaps = 13/397 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C    + Y  L+  L R  +  EA  +L +   L  + +N +I  C     L +A  L  
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 335

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   YS+++  L +  +I S++  +L +E+E      +      V+  F K
Sbjct: 336 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAV--RLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G        L      GL+  +  Y  +I AL   GR  EA  + +E++  G  P   +
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++        +++AE +   +   GV+ +  TY+ +I A    GRW+ A  + KEM 
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +     +   Y+ ++      G   R+  +L+EM   G++P+   YN++I    K   + 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+    +ML++G+ PD +T+NTLI+   K G    A  L E++      P   TYNI+I
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 518 NLLGEQERWEDVKRLL----------GNMRAQGLLPN 544
           +   +    +D   LL          G+ R   +LP+
Sbjct: 634 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 670



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 187/455 (41%), Gaps = 35/455 (7%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNA 198
           D A A++  + +H  C    +LY  +IHAL     + EA  L     L        T++ 
Sbjct: 192 DEALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK----- 251
           ++        + +A  L+ +M   G     + Y  ++Q L R  + D +  +L +     
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 252 ----------------------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
                                 LY+ +     + D    + ++ G  K G    A+R L 
Sbjct: 311 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 370

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +  G +P   TY  V+ +   +G   +  A+ EE+   GL   ++ YN ++    K G
Sbjct: 371 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 430

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + +A  ++ EM   G  PD  +Y+ +I    N  + E A  + + +       N   Y+
Sbjct: 431 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 490

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            I+      G WQ   ++ KEM   G   D   YN +I    K   +  ++   + M  +
Sbjct: 491 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 550

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI+P+ +++N LI    K  R   A EL ++M  +G  P   TYN +IN L +       
Sbjct: 551 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 610

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             LL  +  + + P+++TY  L+  + +    DDA
Sbjct: 611 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 246/535 (45%), Gaps = 42/535 (7%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +  Y  LI+ L ++ ++  A  L Q   +  + P  + Y+ALI    ++  +  AL L S
Sbjct: 160 QFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCS 219

Query: 218 KMRQDGYHCDFINYSLVIQ---SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           ++ + G   D + Y+ +I    S+ R  ++ + LL K+ +E     ++ D    N +I  
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEV-TQLLTKMVRE----NVDPDDYTFNILIDA 274

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             K G   +A   L M    G  P   TY A++    +     EA  +F  + + GL+P 
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN L+ GY K   + +A  +  E+    ++P   +Y+ LID   N+GR    + +L 
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM  S   P+   Y+ ++      G       VL  M   GV+P+   YN M+D +   N
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            ++ A   F+RM+  G+EPD + +N LI+ + K    D A  LF+EM+ +   P   +YN
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYN 514

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI----ECLEG 570
            +I+ L    R   V+ LL  M   G  P+V+TY  L+D + ++  FD AI    + +EG
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG 574

Query: 571 L-----SDQAV--------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +     ++ A+              +A + +   G  P+      LINA  +D    EA 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL---FFNIYKMLSY 660
            +L  M++N   PD +T+  ++  L++    DK  K+    +     NI K L Y
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKRLMY 689



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 185/402 (46%), Gaps = 24/402 (5%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I GF   G   KA+ F       G      TY  +I  LS +G+   A  + +E++
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +S ++P    Y+AL+ G  K G++ DA  + S++   G+L D  TY+ LID   + GRW+
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               +L +M   +  P+ + ++ ++      G       VL  M   G +PD   YN ++
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + +     +H A   F+RM+  G+EPD + +N LID + K    D A  LF+E+  +   
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P   +YN +I+ L    R   VK+LL  M      P+VVTY  L+D   + GR  +A+  
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  CL    + A + F  M   GL+P  L  N LIN + +
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            +   EA  + + M+   L PD+ +Y +L+  L  + +   V
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 11/318 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A   F  +      P T  ++ LL   V+MG+   A  + ++++  G+ P   T+++LI
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + Y +      A  +L  +  S  +PN   ++ I+ G+   G   +     + + + G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D   Y  +I+   K   +  A+     M    ++P+ + ++ LID   K G    A  L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             ++ ERG      TYN +I+      RW++V +LL  M  + + P+  T+  L+D   +
Sbjct: 218 CSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCK 277

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR  +A         Q V A  +M   G KP  +  N+L+  +   +   EA  +   M
Sbjct: 278 EGRILEA---------QGVLA--MMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 618 KENGLKPDVVTYTTLMKA 635
            + GL+PDV+ Y  L+  
Sbjct: 327 VKRGLEPDVLNYNVLIDG 344



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 11/180 (6%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  F+RM+     P T  ++ L+    + G Y  A  LF ++Q +G  P   T+ I+IN
Sbjct: 39  AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
               Q        LL  +   G  PN+VT+ T+++ +           C+ G+  +A++ 
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGF-----------CINGMIFKALDF 147

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + +   G         +LIN   ++ +   A  +LQ M+++ ++P++V Y+ L+  L +
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 214/468 (45%), Gaps = 23/468 (4%)

Query: 167 SILIHALGRSEKLYEAFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQD 222
           +I I  L    +L EA  L  S    + P  +TYN L+    ++  +++A   + +M   
Sbjct: 154 NIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ 213

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           G   D   Y+ +I    + + +  +   L   ++K    D++         +I G    G
Sbjct: 214 GCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTY-----CSLINGLCAEG 268

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D  +A+     AQ   L P    Y +++  L   G  + A  V  E+ E G  P    YN
Sbjct: 269 DVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYN 328

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ G  KMG + DA  V+++    G LPD  T++ +ID Y    + +SA  +++ M + 
Sbjct: 329 IVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P++  Y+ +L G    G+ +   +  +EM   G  P+   YN++I+ F K N L  A
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                RM  +G+ PDTI++NTLI    + G  D A  LF+++ E+GY     T+NI+I  
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              +   +  +++ G M ++G  P++ TY  LVD             C     D+A    
Sbjct: 509 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD-----------GSCKAANVDRAYVHL 557

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             M + G  PS      ++N+   + R +EA A++  M   G+ P+VV
Sbjct: 558 AEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 198/442 (44%), Gaps = 19/442 (4%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           AL L+  + + G     + Y  V++ L    +  D+   + L+ E+    +  D    N+
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDA---RHLFDEMLRRDVFPDVATFNN 120

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           V+    + GD  ++   L      G+S    T    I  L   GR  EA A+ E + ++ 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    YN L++G  K   +++A   +  M   G +PD+ TY+ +ID Y      + A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +LK+       P+   Y  ++ G    G+ +R  ++  E ++  ++PD   YN ++   
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +   + HA+   + M+ +G  PD  T+N +I+   K G    A  +  +   +GY P  
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            T+N MI+   ++ + +   +L+  M   G+ P+ +TY ++++   ++G+  +  E    
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE---- 415

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
                   F  M   G +P+ +  N LI  F +  +  EA  V+  M ++GL PD +++ 
Sbjct: 416 -------TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468

Query: 631 TLMKALIRVDKFHKVFSSYLFF 652
           TL+    R         +YL F
Sbjct: 469 TLIHGFCRNGDLD---GAYLLF 487



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 191/447 (42%), Gaps = 18/447 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSL 248
           + PL Y  ++     +     A +L  +M +     D   ++ V+ +L +   I    +L
Sbjct: 78  VKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGAL 137

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L K+ K      + ++    N  I G  + G   +A+  +  +    ++P   TY  ++ 
Sbjct: 138 LAKVLKR----GMSVNKFTCNIWIRGLCEGGRLEEAVALVE-SMDAYIAPDVVTYNTLMR 192

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L    +  EA      +   G  P    YN ++ GY K   L++A  ++ +    G +P
Sbjct: 193 GLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVP 252

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY  LI+     G  E A  +  E +    KP+  +Y+ ++ G   +G      QV+
Sbjct: 253 DRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVM 312

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM   G  PD   YN++I+   K   +  A    +  + +G  PD  T+NT+ID + K 
Sbjct: 313 NEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKR 372

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            + D A +L E M   G  P   TYN ++N L +  + ++V      M  +G  PN +TY
Sbjct: 373 LKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 432

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L++ + +  + +           +A      M  DGL P  ++ N+LI+ F  +    
Sbjct: 433 NILIENFCKINQLE-----------EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKA 635
            A+ + Q + E G      T+  L+ A
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGA 508



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 198/450 (44%), Gaps = 16/450 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYK 254
           YNA++ A       ++A  +  +M   G   D   +++ I+S   T +   +L L +   
Sbjct: 13  YNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLP 72

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E  CD   L       V+ G    G    A           + P  AT+  V+ AL   G
Sbjct: 73  ERGCDVKPLA---YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKG 129

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +E+ A+  ++ + G+       N  ++G  + G L++A  +V  M+ + + PD  TY+
Sbjct: 130 DIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYN 188

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+       + + A   L+ M      P+ F Y+ I+ GY  R   Q   ++LK+    
Sbjct: 189 TLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK 248

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD   Y  +I+       +  A+  F+   ++ ++PD + +N+L+    + G    A
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ++  EM E G  P   TYNI+IN L +     D   ++ +   +G LP+V T+ T++D 
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y +  + D A++ +E            M   G+ P  +  NS++N   +  +  E     
Sbjct: 369 YCKRLKLDSALQLVER-----------MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETF 417

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + M   G +P+ +TY  L++   ++++  +
Sbjct: 418 EEMILKGCRPNAITYNILIENFCKINQLEE 447



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 27/335 (8%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P   AYNA++   V   Y   A  V   M  +GV PD  T+++ I ++   GR   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+ +           Y  ++ G    G       +  EM    V PD   +N ++  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF-P 508
             +   +  + A   ++L  G+  +  T N  I    + GR + A  L E M    Y  P
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD--AYIAP 182

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
              TYN ++  L +  + ++  + L  M  QG +P+  TY T++D Y +     +A E  
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 567 ----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
                                 C EG  ++A+  F   +   LKP  +  NSL+      
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                A  V+  M E+G  PD+ TY  ++  L ++
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKM 337



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M++    P +  Y+ I+    +     +  +V   M S+GV PD   + V I +F     
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
            H A+     +   G +   + + T++   +  G    A  LF+EM  R  FP   T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +++ L ++    +   LL  +  +G+  N  T    +    + GR ++A+  +E     +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE-----S 175

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           ++A+       + P  +  N+L+    +D +  EA   L+ M   G  PD  TY T++  
Sbjct: 176 MDAY-------IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDG 228

Query: 636 LIRVDKFHK 644
             + D   +
Sbjct: 229 YCKRDMLQE 237


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 215/440 (48%), Gaps = 13/440 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYNAL+    ++   ++A+ ++ +M  +G     + Y+ +I +  R   +  ++  +L 
Sbjct: 140 VTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAM--ELK 197

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++    I LD      ++ GF +AG    AMR     +  G  P   T+ A+I    N 
Sbjct: 198 NQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNR 257

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  E   VFEE+K S   P    +N LL  + + G   +   V  EM+R+G +P+  TY
Sbjct: 258 GKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTY 317

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI AY+  G ++ A  + K M  +   P+   Y+ +LA     G W+++ ++  EMK 
Sbjct: 318 NTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKD 377

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
              +P+   Y  ++  +     +   +A  + + S  IEP  +   TL+  + KC     
Sbjct: 378 GRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVE 437

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           AE  F E++ +G+ P  +T N M+++ G ++ +     +L  M   G  P++ TY +L+ 
Sbjct: 438 AEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMY 497

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           ++ +S  F+ + E L           + +   G+KP  ++ N++I A+  + R  EA  +
Sbjct: 498 MHSRSENFERSEEVL-----------KEILAKGIKPDTISYNTVIFAYCRNGRMKEASRI 546

Query: 614 LQYMKENGLKPDVVTYTTLM 633
              M+E+GL PDV+TY T +
Sbjct: 547 FSEMRESGLVPDVITYNTFV 566



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 230/507 (45%), Gaps = 30/507 (5%)

Query: 167 SILIHALGRSEKL-YEAFLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +++I  LG+  K+   A LL+   +    L    Y +LI+AC  N    +A+ +  KM +
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G     I Y++++    +   +  + ++ L++ ++   +  D    N +I    +    
Sbjct: 62  EGCKPTLITYNVILNVYGKMG-MPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLH 120

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A       + +G  P   TY A++     S RT EA  V  E++ +G  P    YN+L
Sbjct: 121 EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y + G LK+A  + ++M   G+  D  TY+ L+  +  AG+ ESA  V  EM  +  
Sbjct: 181 ISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGC 240

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KPN   ++ ++  + +RG++    +V +E+K+S   PD   +N ++  FG+         
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSG 300

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M   G  P+  T+NTLI  + +CG +D+A ++++ M E G  P  +TYN ++  L 
Sbjct: 301 VFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALA 360

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN---- 577
               WE  +++   M+     PN +TY +L+  Y         +   E +    +     
Sbjct: 361 RGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420

Query: 578 --------------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                               AF  ++  G  P    LN++++ +G  Q   +   +L +M
Sbjct: 421 LLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFM 480

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
            E+G  P + TY +LM    R + F +
Sbjct: 481 NESGFTPSLATYNSLMYMHSRSENFER 507



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 216/504 (42%), Gaps = 55/504 (10%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           ++ Y+ L+   G+S +  EA  + +   +     + +TYN+LISA AR+  L++A+ L +
Sbjct: 139 KVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKN 198

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G + D   Y+ ++    R  K +S++  +++ E+     + +    N +I     
Sbjct: 199 QMVEGGINLDVFTYTTLLSGFVRAGKDESAM--RVFAEMRAAGCKPNICTFNALIKMHGN 256

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M+     +     P   T+  ++     +G   E   VF+E+K +G  P    
Sbjct: 257 RGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 316

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  G WE +  +  EM+
Sbjct: 317 YNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMK 376

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE--------------------------- 430
               KPN   Y  +L  Y +  E  R   + +E                           
Sbjct: 377 DGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLV 436

Query: 431 --------MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
                   +K  G  PD    N M+  +G+           + M   G  P   T+N+L+
Sbjct: 437 EAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM 496

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             H +   ++R+EE+ +E+  +G  P T +YN +I       R ++  R+   MR  GL+
Sbjct: 497 YMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLV 556

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+V+TY T V  Y     F+DAI+ +           R M   G KP+    NS+++ + 
Sbjct: 557 PDVITYNTFVASYAADSMFEDAIDVV-----------RYMIKHGCKPNQNTYNSVVDGYC 605

Query: 603 EDQRDAEAFAVLQYMKENGLKPDV 626
           +     +A   +  + E  L P +
Sbjct: 606 KHNHRDDAIMFISSLHE--LDPHI 627



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 156/347 (44%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +I+ L   G+   A ++  +L + G      AY +L+   V  G  ++A  V  +ME 
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W   + + + M+ +   P+ + Y+ ++   R     +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               V K+MKS G  PD   YN ++D +GK      AM     M   G  P  +T+N+LI
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G    A EL  +M E G      TY  +++      + E   R+   MRA G  
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  G+F + ++  E + +               P  +  N+L+  FG
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCC-----------VPDIVTWNTLLAVFG 290

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  TY TL+ A  R   F +    Y
Sbjct: 291 QNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIY 337


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 237/511 (46%), Gaps = 34/511 (6%)

Query: 148 AVVSWLQKHNLCY-SYELLYSILIHALGRSEKLYEAFLLSQRQR---------------- 190
            ++  L +  LC  + E+   +++  L  S K + A +++  +R                
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 191 -LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
            L P   TY   I    R   +++A  +M +M  DG   D + Y+++I +L    K+D +
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +  +L+ +++    + D      ++  F+  GD  +   F    +  G +P   T+  ++
Sbjct: 319 M--ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILV 376

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            AL  +G   EA  + + +++ G+ P    YN L+ G +++  L DA  + + ME  GV+
Sbjct: 377 NALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVV 436

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  +TY L ID Y  +GR + A    ++M++    PN    +  L    + G  +    +
Sbjct: 437 PTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVI 496

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              +KS+G+ PD+  YN+M+  + K   +  A+     M     EPD I  N+LI+  +K
Sbjct: 497 FNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYK 556

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            GR D A ++F  +++    P   TYN +I  LG++ + +    L  +M   G  PN +T
Sbjct: 557 AGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTIT 616

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           + T++D   ++   D A++ L             M T    P  L  N++I+    ++R 
Sbjct: 617 FNTILDCLCKNDEVDLALKMLYK-----------MTTMNCMPDVLTFNTIIHGLVIEKRV 665

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++A  +   MK+  L PD VT  TL+  +++
Sbjct: 666 SDAIWLFHQMKKM-LTPDCVTLCTLLPGVVK 695



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 197/420 (46%), Gaps = 13/420 (3%)

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            KMR+ G+H +  +Y+ +I  L ++     +L  ++Y+ +  + ++   +  + ++V   
Sbjct: 183 GKMREAGFHLNAYSYNGLIHLLLQSGLCREAL--EMYRRMVLEGLKPSLKTFSALMVATG 240

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K  D       L   + +GL P   TY   I  L  +GR  EA  + + +++ G  P   
Sbjct: 241 KRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVV 300

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+      G L DA  +  +M+ S   PD  TY  ++D +++ G     +    EM
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           E     P+   ++ ++      G     F +L  M+  GV P+ H YN +I    + N L
Sbjct: 361 EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  F+ M + G+ P   T+   ID + K GR D+A E FE+M+ RG  P     N  
Sbjct: 421 DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNAS 480

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  L E  R  + K +   +++ GL P+ VTY  ++  Y ++G+ D+AIE L  +S+   
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQC 540

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                      +P  + +NSLIN   +  R  EA+ +   +K+  L P VVTY TL+  L
Sbjct: 541 -----------EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL 589



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 237/552 (42%), Gaps = 73/552 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI AL  + KL +A  L  + + +      +TY  ++   +   DL +     S+M 
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEME 361

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            DGY  D I +++++ +L +   ID +  LL  + K+     +  +    N +I G  + 
Sbjct: 362 ADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ----GVLPNLHTYNTLISGLLRV 417

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A+      + +G+ P   TY   I     SGR+ +A   FE++K  G+ P   A 
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NA L    +MG L++A+ + + ++ +G+ PD  TY++++  Y+ AG+ + A  +L +M  
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +  +P+  + + ++      G     +++   +K   + P    YN +I   GK   +  
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F  M   G  P+TIT+NT++DC  K    D A ++  +M      P   T+N +I+
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV-------------------------- 552
            L  ++R  D   L   M+   L P+ VT  TL+                          
Sbjct: 658 GLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVY 716

Query: 553 -------DIYG----QSGR-----FDDAIECLEGLSD---------------QAVNA--- 578
                  D+ G    Q+G      F D + C     D               QA+ A   
Sbjct: 717 VDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSV 776

Query: 579 -FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             R  +  G+KP+  + N LI  F     D  A+ +   MK  G  PDV TY  L+ A  
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHG 836

Query: 638 RVDKFHKVFSSY 649
           +  K +++F  Y
Sbjct: 837 KSGKINELFELY 848



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/541 (23%), Positives = 234/541 (43%), Gaps = 85/541 (15%)

Query: 166  YSILIHALGRSEKLYEAFLL--SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ LI  LG+  ++  A  L  S      P   +T+N ++    +ND+++ AL ++ KM 
Sbjct: 582  YNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMT 641

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIEL--------------- 263
                  D + ++ +I  L    ++  +  L  ++ K +  D + L               
Sbjct: 642  TMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMED 701

Query: 264  ----------------DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                            D +   D++ G        K + F        +    +    +I
Sbjct: 702  AFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPII 761

Query: 308  TALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
              L    + + A++VF    KE G+KP  ++YN L++G++ +   + A  + +EM+ +G 
Sbjct: 762  KVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGC 821

Query: 367  LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA------------- 413
             PD  TY+LL+DA+  +G+      + ++M  S  KPN+  ++ I+A             
Sbjct: 822  APDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALD 881

Query: 414  ----------------------GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
                                  G    G  +   ++ +EM   G  P+   YN++I+ FG
Sbjct: 882  LFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941

Query: 452  KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
            K   ++ A   F RM+ EGI PD  ++ +L+ C  + GR D A   FE++++ G +  + 
Sbjct: 942  KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001

Query: 512  TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
             YN+MI+ LG   R E+   L   M+++G+ P++ TY +L+   G           + G+
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG-----------VAGM 1050

Query: 572  SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +QA   +  ++  GL+P+    N+LI  +        A+AV + M   G  P+  T+  
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110

Query: 632  L 632
            L
Sbjct: 1111 L 1111



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 135/565 (23%), Positives = 250/565 (44%), Gaps = 59/565 (10%)

Query: 112  RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
            +V F   +S    P  + ++++    S    +D A  ++S + + N C    ++ + LI+
Sbjct: 494  KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE-NQCEPDIIVINSLIN 552

Query: 172  AL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
             L   GR ++ ++ F   +  +L P  +TYN LI+   +   +++A+ L + M  +G   
Sbjct: 553  TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPP 612

Query: 227  DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
            + I ++ ++  L + +++D +L + LYK    + +  D    N +I G       S A+ 
Sbjct: 613  NTITFNTILDCLCKNDEVDLAL-KMLYKMTTMNCMP-DVLTFNTIIHGLVIEKRVSDAIW 670

Query: 287  FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE--------------------- 325
                 + + L+P   T   ++  +  +G   +A  + E+                     
Sbjct: 671  LFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI 729

Query: 326  LKESGLKPRTKAYNALLKGYV-----------------KMGYLKDAEFVVSEMERSGVLP 368
            L ++G +      + L+ G V                 K   +  + F+    E  GV P
Sbjct: 730  LTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL-GVKP 788

Query: 369  DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
               +Y+ LI+ +      E A  +  EM+ +   P+ F Y+ +L  +   G+    F++ 
Sbjct: 789  TLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848

Query: 429  KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            ++M  S  +P+T  +N++I    K N L  A+  F  ++S    P   T+  L+D   K 
Sbjct: 849  EQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKS 908

Query: 489  GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            GR + A+ELFEEM + G  P    YNI+IN  G+         L   M  +G+ P++ +Y
Sbjct: 909  GRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSY 968

Query: 549  TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            T+LV    ++GR DDA+   E L           +  GL   ++A N +I+  G   R  
Sbjct: 969  TSLVGCLCEAGRVDDALHYFEKL-----------KQTGLYLDSIAYNLMIDGLGRSHRIE 1017

Query: 609  EAFAVLQYMKENGLKPDVVTYTTLM 633
            EA  +   M+  G+ PD+ TY +L+
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLI 1042



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 159/380 (41%), Gaps = 59/380 (15%)

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +   VF  ++   +K     Y  + KG    G L+   F   +M  +G   + ++Y+
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI     +G    A  + + M +   KP+   +S ++     R + +    +L+EM+S 
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++P+ + Y + I   G+   +  A     RM  +G  PD +T+  LID     G+ D A
Sbjct: 259 GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDA 318

Query: 495 EELF-----------------------------------EEMQERGYFPCTTTYNIMINL 519
            ELF                                    EM+  GY P   T+ I++N 
Sbjct: 319 MELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------- 569
           L +    ++   LL  MR QG+LPN+ TY TL+    +  R DDA++             
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 570 --------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                         G SD+A+  F  M+  G+ P+ +A N+ + +  E  R  EA  +  
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498

Query: 616 YMKENGLKPDVVTYTTLMKA 635
            +K NGL PD VTY  +MK 
Sbjct: 499 RLKSNGLAPDSVTYNMMMKC 518



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 219/519 (42%), Gaps = 65/519 (12%)

Query: 170 IHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGY 224
           +++L    +L EA ++  R +   L P  +TYN ++   ++   +++A+ L+S M ++  
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQC 540

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
             D I  + +I +L +  ++D +   K++  ++  K+       N +I G  K G   +A
Sbjct: 541 EPDIIVINSLINTLYKAGRVDEA--WKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNS------------------------------G 314
           M       G G  P T T+  ++  L  +                              G
Sbjct: 599 MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHG 658

Query: 315 RTIEAEA-----VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE--MERSGVL 367
             IE        +F ++K+  L P       LL G VK G ++DA F ++E  + R GV 
Sbjct: 659 LVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDA-FKIAEDFVHRLGVY 716

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYS--RILAGYRDRGEWQRT 424
            D   +  L+         E   +    +      K  S +    ++L  ++     Q  
Sbjct: 717 VDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSV 776

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F  ++  K  GV+P    YN +I+ F   +    A   F  M + G  PD  T+N L+D 
Sbjct: 777 F--IRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDA 834

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           H K G+ +   EL+E+M      P T T+NI+I  L +    +    L  ++ +    P 
Sbjct: 835 HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPT 894

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             TY  L+D   +SGR ++A E  E + D            G +P+N   N LIN FG+ 
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDY-----------GCRPNNAIYNILINGFGKT 943

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVD 640
                A  + + M   G++PD+ +YT+L+  L    RVD
Sbjct: 944 GDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 235/485 (48%), Gaps = 24/485 (4%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLTY--NALISACARNDDLEKALNLMSK 218
           +LY +LI A   L R +  +E F + + + + P  +  N ++S   +++  EKA  L ++
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +       + ++++I  L +  K+  +  ++    +E   I+ +    N +I G+   
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKA--KEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A     + +  G+ P + TY + I+ +   G+  EA  + E++KE GL+P    Y
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY   G L+ A     +M R G++P   TY++LI A     + + A  ++KEM  
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE 359

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+S  Y+ ++ GY   G  ++ F +  EM S G++P    Y  +I    K   +  
Sbjct: 360 KGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F++++ +GI PD I +N LID H   G  DRA  + +EM +    P   T+N ++ 
Sbjct: 420 ADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQ 479

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
               + + E  + L+  M+++G+ P+ ++Y TL+  Y + G   D              A
Sbjct: 480 GRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD--------------A 525

Query: 579 FRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           FRV   M + G  P+ L  N+LI    +++    A  +L+ M   G+ P+  TY +L++ 
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585

Query: 636 LIRVD 640
           +  V+
Sbjct: 586 IGNVE 590



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 173/379 (45%), Gaps = 26/379 (6%)

Query: 288 LGMAQGVGLSPKT-ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           LG+A+GV L  KT   Y  +I A     R  +A   F+ +K  G+ P   A N +L  ++
Sbjct: 109 LGVARGV-LGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFL 167

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K    + A  + +EM R  +     T++++I+     G+ + A+  +  ME    KPN  
Sbjct: 168 KSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVV 227

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ I+ GY  RG  +    +   MK  GV+PD++ Y   I    K   L  A    ++M
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM 287

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G+ P  +T+NTLID +   G  + A +  ++M   G  P  +TYN++I+ L    + 
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM 347

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD- 585
           ++   ++  M  +GL+P+ VTY  L++ Y + G    A    + +  + +   RV  T  
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407

Query: 586 -----------------------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                                  G+ P  +  N+LI+    +     AFA+L+ M +  +
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKV 467

Query: 623 KPDVVTYTTLMKALIRVDK 641
            PD VT+ TLM+   R  K
Sbjct: 468 VPDEVTFNTLMQGRCREGK 486



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 163/379 (43%), Gaps = 56/379 (14%)

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES--- 329
           +GF   GD     + L MA  +  +P +     ++    NSG       VF EL  +   
Sbjct: 61  IGF---GDLDIKSKCLAMAV-ISHAPNSKPSLQLLKETINSG-VYSIREVFNELGVARGV 115

Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+K     Y+ L++   ++    DA      M+  GV+P  H  + ++  +  + R E 
Sbjct: 116 LGIKTYV-LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEK 174

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++  EM                  +R R            +KSS V      +N+MI+
Sbjct: 175 AWVLYAEM------------------FRMR------------IKSSVVT-----FNIMIN 199

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A      M + GI+P+ +T+NT+I  +   GR + A  +F+ M+ RG  P
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKP 259

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            + TY   I+ + ++ + E+   +L  M+  GL P  VTY TL+D Y   G  + A +  
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFD-- 317

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               D+ V        +GL P+    N LI+A   D +  EA  +++ M E GL PD VT
Sbjct: 318 --YRDKMVR-------EGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVT 368

Query: 629 YTTLMKALIRVDKFHKVFS 647
           Y  L+    R     K F+
Sbjct: 369 YNILINGYCRCGNVKKAFT 387


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 238/501 (47%), Gaps = 25/501 (4%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + L+ A  R +K  EA+ L +  R    +P  +TY+ LI+   +  D ++A  L+ +M +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G       Y+ +I+ L    ++DS+L+     +  C    +   +L D +   A+  DA
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDA 255

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           S  +  +  A   G +P   TY  +I      G   EA  +F ++ E+   P    YN L
Sbjct: 256 SLILEDMIEA---GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 312

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY K    +D   ++ EM + G  P+  TY+ L+D+   +G++  A  + + M     
Sbjct: 313 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+ F ++ ++  +   G+    +++ + M   G  PD + YN+MI    + N +  A  
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             +RM   G  PD +T+N+++    K  + D A E++E ++  GYF    T + +I+ L 
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 492

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  R +D ++LL  M   G  P+VV YT L+  + ++ +            D+++  F  
Sbjct: 493 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL-----------DKSLAFFSE 541

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G  P+ +  + +I+   +  R  +   +L+ M E G+ PD + YT+++  L + D 
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 642 FHKVFSSYLFFNIYKMLSYSG 662
           + +       + +YK++  +G
Sbjct: 602 YDEA------YELYKLMKQTG 616



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 240/548 (43%), Gaps = 58/548 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++++++K LC  N  +D   A+V +      C    + Y+IL+ AL +S ++ +A L+ +
Sbjct: 204 VYNTIIKGLCD-NGRVD--SALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILE 260

Query: 188 ---RQRLTP--LTYNALISACARNDDLEKALNLMSKM----------------------- 219
                   P  +TYN LI+   +  ++++A+ L ++M                       
Sbjct: 261 DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 320

Query: 220 -RQDG---------YHCD--FINYSLVIQSLTRTNK-IDSSLLQKLYKEIECDKIELDGQ 266
             QDG         Y C+  FI Y+ ++ SL ++ K ID+  L ++    +C        
Sbjct: 321 RPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN 380

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           L+ D+   F K G    A     +    G  P   TY  +I+    + R  +A  + E +
Sbjct: 381 LMIDM---FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            E+G  P    YN+++ G  K   + +A  V   +   G   D  T S LID    + R 
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  +L+EME + + P+   Y+ ++ G+    +  ++     EM   G  P    Y+++
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ID   K   +         ML  G+ PD I + ++ID   K   YD A EL++ M++ G 
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN++++ L +  R ++   LL  M + G LP+ VTY ++ D + +S        
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE------ 671

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                 D+A   F+ M++ G  P+    + L+     +++  +A  + +   E G   D 
Sbjct: 672 -----HDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDP 726

Query: 627 VTYTTLMK 634
               TL +
Sbjct: 727 EISRTLQQ 734



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 139/336 (41%), Gaps = 58/336 (17%)

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T + L+ A+    + + A  + K        P+S  YS ++ G+    ++Q+ +++L EM
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193

Query: 432 KSSGVEPDTHFYN----------------------------------VMIDTFGKYNCLH 457
           +  G+ P    YN                                  +++D   K   + 
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARIS 253

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M+  G  P+ +T+NTLI+   K G  D A  LF +M E    P   TYNI+I
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------- 566
           +   +QER +D  +LL  M   G  PN +TY TL+D   +SG++ DA             
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C  G  D A   F++M   G  P     N +I+      R  +A  +
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           L+ M E G  PDVVTY +++  L +  +  + +  Y
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 12/246 (4%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           K + F  + +L+ +  + + Q  + + K  +     PD+  Y+ +I+ F K      A  
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D M   GI P    +NT+I      GR D A   + +MQ R   P   TY I+++ L 
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALC 247

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  R  D   +L +M   G  PNVVTY TL++ +           C  G  D+AV  F  
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGF-----------CKLGNMDEAVVLFNQ 296

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M  +   P     N LI+ + + +R  +   +LQ M + G +P+ +TY TLM +L++  K
Sbjct: 297 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGK 356

Query: 642 FHKVFS 647
           +   F+
Sbjct: 357 YIDAFN 362


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 226/508 (44%), Gaps = 57/508 (11%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +  N L   C      E    L+ +M   G   D  +Y +V++SL    K  S    +
Sbjct: 143 TIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRK--SGQADE 200

Query: 252 LYKEI-ECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           L + + E   + L   +  N VI GF K GD +KA          G+SP  +TY  V+ A
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +    +AEA+  ++ + G+ P    YN+L+ GY   G  K+A  V  +M   G+LPD
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T + L+ +    G+ + AR V   M +   K + F Y  +L GY  +G      ++  
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M S G+ PD+H +NV+I  + K   L  A   F+ M  +G+EPD +T++T+I    + G
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440

Query: 490 RYDRAEELFEEMQERGYFPCTTTY-----------------------------------N 514
           + D A E F +M ++G  P  +TY                                   N
Sbjct: 441 KMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFN 500

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +IN L +  R  D + +     + GL PNV+ Y TL+D Y           CL G  + 
Sbjct: 501 FIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGY-----------CLVGKMEN 549

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A+  F VM + G++P+ +   +L+N + +  R  E  ++ + +   G+KP    Y  ++ 
Sbjct: 550 ALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILH 609

Query: 635 ALIRVD-------KFHKVFSSYLFFNIY 655
            L +         KFH++  S +  + Y
Sbjct: 610 GLFQAGRTVPAKVKFHEMTESGIAMDRY 637



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/598 (23%), Positives = 253/598 (42%), Gaps = 94/598 (15%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYEAFL 184
           +LL+ LC +  + + A  ++     H  C      Y I++ +L      G++++L     
Sbjct: 148 NLLRGLCEAKRTAE-ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMA 206

Query: 185 LSQRQRL-TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 L   + YN +I    +  D+ KA +L ++M Q G   D   Y+ V+ +L +   
Sbjct: 207 EGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARA 266

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  + + +++    +  D    N +I G++  G   +A+R        G+ P   T 
Sbjct: 267 MDKA--EAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++ +L   G+  +A  VF+ +   G K    +Y  +L GY   G L D   + + M  
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP-------------------- 403
            G+ PD H +++LI AYA  G  + A I+  EM     +P                    
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 404 -----NSFI----------YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                N  I          Y  ++ G+   G+  +   ++ +M + G+ PD   +N +I+
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 449 TFGK-------------------------YN------CL----HHAMAAFDRMLSEGIEP 473
              K                         YN      CL     +A+  FD M+S GI+P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + + + TL++ + K GR D    LF E+  +G  P TT YNI+++ L +  R    K   
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M   G+  +  TY+ ++      G F ++       SD+A+  F+ +    +K     
Sbjct: 625 HEMTESGIAMDRYTYSIVL-----GGLFKNSC------SDEAILLFKELHAMNVKIDITT 673

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
           LN +I    + +R  EA  +   +  +GL P VVTY+ +M  LI+   V++   +FSS
Sbjct: 674 LNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSS 731



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 228/510 (44%), Gaps = 56/510 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+    + +  EA  +S++   Q + P  +T N+L+++  ++  ++ A ++   M 
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348

Query: 221 QDGYHCDFINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             G   D  +Y +++    T+   +D   L +L+  +  D I  D  + N +I  +AK G
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVD---LTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A       +  G+ P   TY+ VI AL   G+  +A   F ++ + G+ P    Y+
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L++G+   G L  A+ +V +M   G+ PD   ++ +I+     GR   A+ +       
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN  +Y+ ++ GY   G+ +   +V   M S+G++P+   Y  +++ + K   +   
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF------------ 507
           ++ F  +L +GI+P T  +N ++   F+ GR   A+  F EM E G              
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645

Query: 508 ----PCT-------------------TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                C+                   TT NIMI  + +  R E+ K L  ++   GL+P+
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPS 705

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL-KPSNLALNSLINAFGE 603
           VVTY+ ++          + I+  EGL ++A + F  M   G  +P++  LN ++    E
Sbjct: 706 VVTYSIMM---------TNLIK--EGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLE 754

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            +    A   L  + E     D  T T L+
Sbjct: 755 KREIVRAGTYLSKIDERSFSLDHSTTTLLI 784



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 170/350 (48%), Gaps = 14/350 (4%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP   TY  ++   + + R     A F ++ ++GL   T   + LL+G  +     +A 
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK--PNSFIYSRIL 412
           + ++  M   G +PD  +Y +++ +  +  +   A  +L+ M    A   PN+  Y+ ++
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   +  EM   G+ PD   YN +++   K   +  A A   +M+ +G+ 
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD  T+N+LI  +   G++  A  + ++M  +G  P   T N ++  L +  + +D + +
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             +M  +G   ++ +Y  +++ Y   G       CL  L++     F +M +DG+ P + 
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKG-------CLVDLTE----LFNLMLSDGIAPDSH 392

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             N LI A+ +      A  +   M+E G++PDVVTY+T++ AL R+ K 
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 159/374 (42%), Gaps = 8/374 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS +I AL R  K+ +A      ++ Q    +  TY+ LI     + DL KA +L+ +M 
Sbjct: 429 YSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   ++ +I +L +  ++  +  Q ++       +  +  + N ++ G+   G 
Sbjct: 489 NKGMRPDIGCFNFIINNLCKLGRVMDA--QNIFDFTISIGLHPNVMVYNTLMDGYCLVGK 546

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+R   +    G+ P    Y  ++      GR  E  ++F E+   G+KP T  YN 
Sbjct: 547 MENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNI 606

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G  + G    A+    EM  SG+  D +TYS+++         + A ++ KE+   +
Sbjct: 607 ILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +    + ++AG       +    +   +  SG+ P    Y++M+    K   +  A 
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726

Query: 461 AAFDRMLSEGIE-PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             F  M + G E P++   N ++    +     RA     ++ ER +    +T  ++I+L
Sbjct: 727 DMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDL 786

Query: 520 LGEQERWEDVKRLL 533
              +    +  R L
Sbjct: 787 FSSKGTCREHIRFL 800


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 239/527 (45%), Gaps = 57/527 (10%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKL-----YEAFLLSQRQRLTPLTYNALISACARND 207
           + +H         Y+ +I +L R   L     Y + ++    R    T+N+LI    R +
Sbjct: 1   MHRHAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTN 60

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            ++ A +L  KM   G+  D ++Y+ +I+    T +ID ++  +L+ E++    + D  +
Sbjct: 61  QVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAV--ELFGEMD----QPDMHM 114

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
              ++ G  KAG   + +  L   + +G  P T  YAAV+       +  EAE + +E+ 
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E GL P      A++  Y K G + DA  V+  M+  G  P+  TY+ L+  + N G+  
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +L +M V    P++  Y+ ++ G    G  +  F++L+ M+  G+  D + YN +I
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE-------- 499
           +   K      A + FD + + GI+P+ +T+N+LI+   K G+ D A +  E        
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 500 ---------------------------EMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
                                      EM ++   P T  Y I+I+ L ++  +  V R 
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
            G M + G  P+VVTYTT +  Y           C+EG  ++A N    M  +G+    +
Sbjct: 415 WGEMVSSGCNPDVVTYTTSMRAY-----------CIEGRLNEAENVLMEMSKNGVTVDTM 463

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           A N+L++      +   A ++L+ M      P+  TY  L++ L+R+
Sbjct: 464 AYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRM 510



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 155/344 (45%), Gaps = 23/344 (6%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY AVI +L        A      +  SG +P    +N+L+ GY +   +  A  +  +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G   D  +Y+ LI+ +   GR + A  +  EM+    +P+  +Y+ ++ G    G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE----GIEPDTIT 477
           +    +L+ MK  G  P T  Y  ++D    + C        + ML E    G+ P  +T
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVD----FRCWERKAKEAEEMLQEMFEKGLAPCVVT 184

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
              +I+ + K GR   A  + E M+ RG  P   TYN ++     + +      LL  MR
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G+ P+ VTY  L  I GQ         C++G  + A    R+M  DGL       N+L
Sbjct: 245 VCGVNPDAVTYNLL--IRGQ---------CIDGHIESAFRLLRLMEGDGLIADQYTYNAL 293

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           INA  +D R  +A ++   ++  G+KP+ VT+ +L+  L +  K
Sbjct: 294 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK 337



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 202/509 (39%), Gaps = 41/509 (8%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARND 207
           L K   C      Y+ L+       K+++A  L  + R+       +TYN LI     + 
Sbjct: 207 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDG 266

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            +E A  L+  M  DG   D   Y+ +I +L +  + D +    L+  +E   I+ +   
Sbjct: 267 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC--SLFDSLETRGIKPNAVT 324

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G  K+G    A +FL      G +P T TY++ I  L     + E  +   E+ 
Sbjct: 325 FNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 384

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  +KP T  Y  ++   +K            EM  SG  PD  TY+  + AY   GR  
Sbjct: 385 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 444

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  VL EM  +    ++  Y+ ++ G+   G+      +LK+M S    P+   Y +++
Sbjct: 445 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 504

Query: 448 DTFGKYNCLHHAM-----------------AAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               +   +   +                   FD M      P++ T++++++   + GR
Sbjct: 505 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 564

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + A  L   M+E         Y  ++    + +R+ D   L+ +M   G +P++++Y  
Sbjct: 565 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQH 624

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRD 607
           L+     SG         EG +D+A   F   R     P  +    +I+     G     
Sbjct: 625 LL-----SGLI------CEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 673

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            E   +L+ M     +P   TY  L + L
Sbjct: 674 REMIIMLERMN---CRPSHQTYAMLTEEL 699



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 108/240 (45%), Gaps = 15/240 (6%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++     R +     + L  M  SG  PD + +N +I  + + N +  A   FD+M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G   D +++  LI+   + GR D A ELF EM +    P    Y  ++  L +  R E
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   +L  M+  G  P+   Y  +VD             C E  + +A    + M   GL
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDF-----------RCWERKAKEAEEMLQEMFEKGL 178

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            P  +   ++INA+ ++ R ++A  VL+ MK  G KP+V TY  L++      K HK  +
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 241/533 (45%), Gaps = 27/533 (5%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYE 181
           + + LLK  C +  + D A  ++        C      YSIL+ +L      G+++ L  
Sbjct: 148 IANHLLKGFCEAKRT-DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             +       +P  + YN +I    +  D+ KA +L  +M Q G   DF+ YS V+ +L 
Sbjct: 207 -MMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +D +  +   +++    +  +    N++I G++  G   +A+R     +   + P 
Sbjct: 266 KARAMDKA--EAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  ++ +L   G+  EA  VF+ +   G  P   +YN +L GY   G L D   +  
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G+ P   T+++LI AYAN G  + A I+  EM     KPN   Y+ ++A     G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     +   +M   GV PD + Y+ +I  F  +  L  A      +++ G+  D + ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I+   K GR   A+ +F+     G  P    Y+++++      + E   R+   M + 
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+ PN V Y TLV+ Y + GR D      EGLS      FR M   G+KPS +  N +I+
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRID------EGLS-----LFREMLQKGIKPSTILYNIIID 612

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              E  R   A      M E+G+  +  TY+ +++ L +    ++ F   +F 
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK----NRCFDEAIFL 661



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 234/528 (44%), Gaps = 43/528 (8%)

Query: 166 YSILIHALGRSEK--LYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           Y+IL+    R+ +  L  AF   LL    R+  +  N L+         ++AL+ L+ + 
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRT 173

Query: 220 RQDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            + G   D  +YS++++SL    ++ + D  L         C     D    N VI GF 
Sbjct: 174 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP---DVVAYNTVIDGFF 230

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K GD +KA          G+ P   TY++V+ AL  +    +AEA   ++   G+ P   
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW 290

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+ GY   G  K+A  V  EM R  +LPD  T+++L+ +    G+ + AR V   M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    P+ F Y+ +L GY  +G       +   M   G+ P    +NV+I  +     L
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGML 410

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  F+ M   G++P+ +T+ T+I    + G+ D A E F +M ++G  P    Y+ +
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           I            K L+  +   G+  ++V ++++++   + GR  DA            
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         CL G  ++A+  F  M + G++P+++   +L+N + +  R  E  +
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVD-------KFHKVFSSYLFFN 653
           + + M + G+KP  + Y  ++  L           KFH++  S +  N
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 232/491 (47%), Gaps = 21/491 (4%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++HAL ++  +   EAFL     + + P   TYN LI   +     ++A+ +  +MR
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + +++++ SL +  KI  +  + ++  +       D    N ++ G+A  G 
Sbjct: 317 RQSILPDVVTFNMLMGSLCKYGKIKEA--RDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                    +  G G++P   T+  +I A +N G   +A  +F E+++ G+KP    Y  
Sbjct: 375 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTT 434

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    ++G + DA    ++M   GV PD++ Y  LI  +   G    A+ ++ E+  + 
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              +  ++S I+      G       +     + G+ P    Y++++D +     +  A+
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M+S GIEP+ + + TL++ + K GR D    LF EM ++G  P T  YNI+I+ L
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 614

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            E  R    K     M   G+  N  TY+ ++      G F +   C     D+A+  F+
Sbjct: 615 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL-----RGLFKN--RCF----DEAIFLFK 663

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-- 638
            +R   +K   + LN++I    + +R  EA  +   +  +GL P VVTY+ ++  LI+  
Sbjct: 664 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEG 723

Query: 639 -VDKFHKVFSS 648
            V++   +FSS
Sbjct: 724 LVEEAEDMFSS 734



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 170/350 (48%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G   + + Y+ VI +L R  K+D ++ +K  +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM-EKFNQ 454

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    + +I GF   G   KA   +      G+      ++++I  L   G
Sbjct: 455 MID-QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLG 513

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    Y+ L+ GY  +G ++ A  V   M  +G+ P++  Y 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +Y+ I+ G  + G          EM  S
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   Y++++    K  C   A+  F  + +  ++ D IT NT+I   F+  R + A
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +   G  PC  TY+IMI  L ++   E+ + +  +M+  G  P+
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 176/357 (49%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      N LLKG+ +     +A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIYSRIL 412
           + ++      G +PD  +YS+L+ +  + G+   A  +L+ M    A   P+   Y+ ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   Y+ ++    K   +  A A   +M+++G+ 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LI  +   G++  A  +F+EM+ +   P   T+N+++  L +  + ++ + +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +Y  +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPVIC 395

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KP+V+TYTT++ AL R+ K       +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKF 452



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 219/516 (42%), Gaps = 60/516 (11%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           +NL Y Y         + G+ ++    F   +RQ + P  +T+N L+ +  +   +++A 
Sbjct: 293 NNLIYGYS--------STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           ++   M   G + D  +Y++++    T+   +D   +  L+  +  D I       N +I
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD---MTDLFDLMLGDGIAPVICTFNVLI 401

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             +A  G   KAM      +  G+ P   TY  VI AL   G+  +A   F ++ + G+ 
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--------------------------- 365
           P   AY+ L++G+   G L  A+ ++SE+  +G                           
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521

Query: 366 --------VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
                   + P    YS+L+D Y   G+ E A  V   M  +  +PN  +Y  ++ GY  
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G       + +EM   G++P T  YN++ID   +      A   F  M   GI  +  T
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++ ++   FK   +D A  LF+E++         T N MI  + +  R E+ K L  ++ 
Sbjct: 642 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 701

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL+P VVTY+ ++          + I+  EGL ++A + F  M+  G +P +  LN +
Sbjct: 702 RSGLVPCVVTYSIMI---------TNLIK--EGLVEEAEDMFSSMQNAGCEPDSRLLNHV 750

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +    +      A A L  + E     + +T   L+
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 168/397 (42%), Gaps = 10/397 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
           +D A  + + ++ H +     L Y+ +I AL R  K+ +A      ++ Q        Y+
Sbjct: 410 LDKAMIIFNEMRDHGV-KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEI 256
            LI     +  L KA  L+S++  +G H D + +S +I +L +  ++ D+  +  L   +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                 +   +L D   G+   G   KA+R        G+ P    Y  ++      GR 
Sbjct: 529 GLHPTAVVYSMLMD---GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRI 585

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            E  ++F E+ + G+KP T  YN ++ G  + G    A+    EM  SG+  ++ TYS++
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +        ++ A  + KE+   + K +    + ++AG       +    +   +  SG+
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            P    Y++MI    K   +  A   F  M + G EPD+   N ++    K     RA  
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
              ++ ER +     T  ++++L   +    +  R L
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 240/535 (44%), Gaps = 60/535 (11%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISA-CARNDDLEKALNLMSKM 219
           Y I+I    R  +L  AF     +++   R++P+ ++ L+   C R    +    ++ +M
Sbjct: 102 YGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRM 161

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD---KIELDGQLLNDVIVGFA 276
            + G   D  +Y+++++ L   +K     L  L+  I  D   +  LD      VI G  
Sbjct: 162 PELGCKPDLFSYTILLKGLC-DDKTSQQALDLLH--IMADHKGRCPLDVVAYTTVINGLL 218

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G   KA          G SP   TY+++I+ALS +    +A  VF  + ++G+ P   
Sbjct: 219 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 278

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y +L+ GY   G  K+A  +  +M R GV PD  TY+ L+D     G+   AR +   +
Sbjct: 279 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 338

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                KP+S  Y  +L GY   G       +L  M   G++   H +N+++  + K+N +
Sbjct: 339 VKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKV 398

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  F  M  +G+ PD + + T++D     GR D A   F  ++  G  P    +  +
Sbjct: 399 DEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTL 458

Query: 517 INLLGEQERWEDVKRL-------------------LGNMRAQGLL--------------- 542
           I+ L   ++W+ V+ L                   +GN+  +G +               
Sbjct: 459 IHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGI 518

Query: 543 -PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN  TY TL+D Y           CL+G  D+A+    VM  +G+KPS++  N++IN +
Sbjct: 519 EPNTNTYNTLIDGY-----------CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGY 567

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
            ++ R  +   +L+ M   G+ P +VTY  L++ L +  +   V +  L+  + K
Sbjct: 568 SQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR--TVAAKELYLRMIK 620



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 27/376 (7%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-E 355
           +P  ATY  VI      GR   A A    +  +GL+     ++ LLKG        DA +
Sbjct: 96  APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK-PNSFI-YSRILA 413
            V+  M   G  PD  +Y++L+    +    + A  +L  M     + P   + Y+ ++ 
Sbjct: 156 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 215

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    G+  + + +   M   G  PD   Y+ +I    K   +  A   F RM+  G+ P
Sbjct: 216 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 275

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D I + +L+  +   G+   A  +F++M   G  P   TY  +++ L +  +  + +++ 
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 335

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLS---------------- 572
            ++  +G  P+  TY TL+  Y   G   +  + L+     G+                 
Sbjct: 336 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 395

Query: 573 ---DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              D+A+  F  MR  GL P  +   ++++      R  +A +    +K  GL P++V +
Sbjct: 396 NKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVF 455

Query: 630 TTLMKALIRVDKFHKV 645
           TTL+  L   DK+ KV
Sbjct: 456 TTLIHGLCTCDKWDKV 471



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 165/386 (42%), Gaps = 14/386 (3%)

Query: 125 PAP--LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           P+P  + +S + +  S   ++D A  V + + K+ +     ++Y+ L+H    S K  EA
Sbjct: 238 PSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC-IMYTSLVHGYCSSGKPKEA 296

Query: 183 FLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             + +   R  + P  +TY AL+    +N    +A  +   + + G+  D   Y  ++  
Sbjct: 297 IGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHG 356

Query: 238 LTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
                 +     LL  + K+     ++L   + N ++  +AK     +A+      +  G
Sbjct: 357 YATEGALVEMHDLLDLMMKK----GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           L+P    Y  V+  L  +GR  +A + F  LK  GL P    +  L+ G          E
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 472

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +  EM   G+  D   ++ ++      GR   A+ +   M     +PN+  Y+ ++ GY
Sbjct: 473 ELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 532

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+     ++L  M  +GV+P    YN +I+ + +   +   +     M  +G+ P  
Sbjct: 533 CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGI 592

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEM 501
           +T+  L+   F+ GR   A+EL+  M
Sbjct: 593 VTYEMLLQGLFQAGRTVAAKELYLRM 618



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 494 AEELFEEMQERGYF---PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           A  LF  M   G     P   TY I+I       R +     +G +   GL  + + ++ 
Sbjct: 80  AISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSP 139

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+       R  DA++ +           R M   G KP   +   L+    +D+   +A
Sbjct: 140 LLKGLCDRRRTSDAMDIV----------LRRMPELGCKPDLFSYTILLKGLCDDKTSQQA 189

Query: 611 FAVLQYMKEN-GLKP-DVVTYTTLMKALIRVDKFHKVFSSY 649
             +L  M ++ G  P DVV YTT++  L+R  +  K +S +
Sbjct: 190 LDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLF 230


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 222/459 (48%), Gaps = 8/459 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI    +   ++    L+  M   G   + I+Y++VI  L R  ++    +  + 
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKE--ISFVL 298

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+      LD    N +I G+ K G+  +A+         GLSP   TY ++I ++  +
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A    ++++  GL P  + Y  L+ G+ + GY+ +A  V+ EM  +G  P   TY
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+ +  AG+   A  VL++M+     P+   YS +L+G+    +     +V ++M +
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PDT  Y+ +I  F +      A   FD ML  G+ PD  T+  LI+ +   G   +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQK 538

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L  EM E+G  P   TY+++IN L +Q R  + KRLL  +  +  +P+ VTY TL++
Sbjct: 539 AIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 554 IYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
               +  F   +      C++G+  +A   F  M     KP   A N +I+         
Sbjct: 599 -NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIR 657

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +A+++ + M ++G     VT   L+K L +  K +++ S
Sbjct: 658 KAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNS 696



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 200/458 (43%), Gaps = 57/458 (12%)

Query: 166 YSILIHALGRSEKLYE-AFLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I+ L R  ++ E +F+L++  +    L  +TYN LI    +  +  +AL + ++M 
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     I Y+ +I S+ +   ++ +   +   ++    +  + +    ++ GF++ G 
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRA--TEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A R L      G SP   TY A+I     +G+ ++A AV E++KE GL P   +Y+ 
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G+ +   + +A  V  +M   G+ PD  TYS LI  +    R + A  +  EM    
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY------- 453
             P+ F Y+ ++  Y   G+ Q+  Q+  EM   GV PD   Y+V+I+   K        
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAK 575

Query: 454 -----------------------NC--------------------LHHAMAAFDRMLSEG 470
                                  NC                    +  A   F+ ML + 
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKN 635

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            +PD   +N +I  H + G   +A  L++EM + G+   T T   ++  L ++ +  ++ 
Sbjct: 636 HKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELN 695

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            ++ N+     L        LV+I  + G  D  ++ L
Sbjct: 696 SVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVL 733


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 217/470 (46%), Gaps = 15/470 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           ++ A  R E +   F L Q+Q  + +  TY  +         L +A   + KMR+ G+  
Sbjct: 131 MLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVL 190

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +  +Y  +I  L ++     +L  K+Y+ +  + I+   +  + ++V   K  D    M 
Sbjct: 191 NGYSYIGLIHLLLKSGFCREAL--KVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMG 248

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   + +GL P   T+   I  L  +G+  EA  + + + ++G  P    Y  L+    
Sbjct: 249 LLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALC 308

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L +A+ +  +M+ S   PD  TY  L+D +++ G  ++ +    EME     P+  
Sbjct: 309 NAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVV 368

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ ++      G+    F  L  MK  GV P+ H YN +I    + N L  A+  F+ M
Sbjct: 369 TFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM 428

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            S G+E    T+   ID + K G   +A + FE+M+  G  P     N  +  L EQ R 
Sbjct: 429 ESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRL 488

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E+ K     ++  GL P+ +TY  L+  YG++GR DDAI+ L             M  +G
Sbjct: 489 EEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSE-----------MEENG 537

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             P  + +NSLI+   +  R  EA+ + Q MKE  L P VVTY TL+  L
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGL 587



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 223/486 (45%), Gaps = 19/486 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS L+ ALG+   +     L Q       R    T+   I    R   +++A  ++ +M 
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + Y+++I +L    K++++  ++L+ +++    + D      ++  F+  GD
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNA--KELFLKMKASSHKPDRVTYITLLDKFSDHGD 347

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                 F    +  G  P   T+  +I AL   G+  EA    + +K+ G+ P    YN 
Sbjct: 348 LDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G +++  L +A  + + ME  G+    +TY L ID Y  +G    A    ++M+ + 
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNG 467

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN    +  L    ++G  +   +    +K  G+ PD   YN+++  +GK   +  A+
Sbjct: 468 IVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAI 527

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M   G +P+ +  N+LID  +K  R D A ++F+ M+E    P   TYN ++  L
Sbjct: 528 KLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGL 587

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G++ R ++   L   M A    PN +++ TL+D   ++G  D A++ L  +++  +N F 
Sbjct: 588 GKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTE--MNCF- 644

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                   P  L  N++I    ++ R   AF +   MK+  + PD VT  TL+  +I+  
Sbjct: 645 --------PDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDG 695

Query: 641 KFHKVF 646
           +    F
Sbjct: 696 RIEDAF 701



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 233/510 (45%), Gaps = 21/510 (4%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
            +++LL  LC  N  +DLA  ++  + + N C+   L Y+ +I+ L +  ++  AF L  +
Sbjct: 615  FNTLLDCLCK-NGEVDLALKMLFRMTEMN-CFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672

Query: 189  QR--LTP--LTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTRTNK 243
             +  + P  +T   L+    ++  +E A  +  + +   G H D   +  ++  +    +
Sbjct: 673  MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAE 732

Query: 244  IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
            I  S+L    + + C+ I  D  +L  ++    K G A  A   FL + +   ++P    
Sbjct: 733  IGQSIL--FAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEA 790

Query: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
            Y ++I  L  +  T  A  +F ++K +G  P    YN  L    K G +K+   +  EM 
Sbjct: 791  YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850

Query: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              G  P+  T++++I     +   + A  +  ++      P  + Y  ++ G    G  +
Sbjct: 851  FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLE 910

Query: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               Q  +EM   G  P+   YN++++ FGK   +  A   F RM+ EGI PD  +++ ++
Sbjct: 911  EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMV 970

Query: 483  DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            DC    G+ D A   FEE++  G  P    YN+MIN LG  +R E+   L   MR +G+ 
Sbjct: 971  DCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGIT 1030

Query: 543  PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            P++ TY  L+   G           + G+ ++A   +  ++  GL+P+    N+LI    
Sbjct: 1031 PDLYTYNALILNLG-----------IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 603  EDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                   A+AV + M   G +P+  T+  L
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 251/579 (43%), Gaps = 78/579 (13%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---YEAFLLSQRQRLTP--LT 195
             ID AY ++  +     C    + Y++LI AL  + KL    E FL  +     P  +T
Sbjct: 276 GKIDEAYGILKRMDDAG-CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVT 334

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           Y  L+   + + DL+      S+M  DGY  D + ++++I +L +  K+D +   L  + 
Sbjct: 335 YITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK 394

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K+     +  +    N +I G  +     +A+      + +GL     TY   I     S
Sbjct: 395 KQ----GVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKS 450

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G + +A   FE++K +G+ P   A NA L    + G L++A+   + +++ G+ PD  TY
Sbjct: 451 GESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG-YR-DR-GEWQRTFQVLKE 430
           ++L+  Y  AGR + A  +L EME +   P   I + ++   Y+ DR  E  + FQ +KE
Sbjct: 511 NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           MK   + P    YN ++   GK   +  A A F  M+++   P+TI++NTL+DC  K G 
Sbjct: 571 MK---LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGE 627

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ---------GL 541
            D A ++   M E   FP   TYN +I  L ++ R      L   M+            L
Sbjct: 628 VDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTL 687

Query: 542 LPNVVTYTTLVDIY--------------------------------GQSGRF-------- 561
           LP V+    + D +                                GQS  F        
Sbjct: 688 LPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNT 747

Query: 562 ---DDAIE-------CLEGLSDQAVNAF-RVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
              DD++        C  G +  A N F ++ ++  + PS  A NSLI+   + +    A
Sbjct: 748 ICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMA 807

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + +   MK  G  PDV TY   + AL +  K  ++F  Y
Sbjct: 808 WGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 13/374 (3%)

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKPRT 335
           K+G   +A++        G+ P   TY+A++ AL    R IE    + +E++  GL+P  
Sbjct: 204 KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKR-RDIETVMGLLQEMESLGLRPNI 262

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             +   ++   + G + +A  ++  M+ +G  PD  TY++LIDA  NAG+  +A+ +  +
Sbjct: 263 YTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M+ S  KP+   Y  +L  + D G+     +   EM++ G  PD   + ++ID   K   
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A    D M  +G+ P+  T+NTLI    +  R D A ELF  M+  G      TY +
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            I+  G+        +    M+  G++PN+V     +    + GR ++A E   GL    
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL---- 498

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                  +  GL P  +  N L+  +G+  R  +A  +L  M+ENG  P+VV   +L+  
Sbjct: 499 -------KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDT 551

Query: 636 LIRVDKFHKVFSSY 649
           L + D+  + +  +
Sbjct: 552 LYKADRVDEAWKMF 565



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 241/551 (43%), Gaps = 57/551 (10%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
            P  + +++L         +D A  ++S +++ N C    ++ + LI  L +++++ EA+ 
Sbjct: 505  PDAITYNILMRCYGKAGRVDDAIKLLSEMEE-NGCDPEVVIINSLIDTLYKADRVDEAWK 563

Query: 185  LSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            + QR +   L P  +TYN L++   +   +++A  L   M  D    + I+++ ++  L 
Sbjct: 564  MFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLC 623

Query: 240  RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            +  ++D +L + L++  E +    D    N VI G  K    + A       + V + P 
Sbjct: 624  KNGEVDLAL-KMLFRMTEMNCFP-DVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPD 680

Query: 300  TATYAAVITALSNSGRTIEAEAVFEE--------------------------LKESGLKP 333
              T   ++  +   GR  +A  V +E                          + +S L  
Sbjct: 681  YVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFA 740

Query: 334  RTKAYNA----------LLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYAN 382
             +   N           L+K   K G   DA  V  ++ +S  + P    Y+ LID    
Sbjct: 741  ESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK 800

Query: 383  AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            A   E A  +  +M+ +   P+ F Y+  L      G+ +  F + +EM   G +P+T  
Sbjct: 801  ARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 443  YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            +N++I    K N L  A+  +  ++S    P   T+  LID   K GR + A++ FEEM 
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920

Query: 503  ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            + G  P    YNI++N  G+Q   E    L   M  +G+ P++ +Y+ +VD     G+ D
Sbjct: 921  DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980

Query: 563  DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            DA+           + F  ++  GL P  +  N +IN  G  QR  EA ++   M+  G+
Sbjct: 981  DAL-----------HYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGI 1029

Query: 623  KPDVVTYTTLM 633
             PD+ TY  L+
Sbjct: 1030 TPDLYTYNALI 1040



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 24/352 (6%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T T   V+  L    R  +   VF  +++  +K     Y  + K     G L++A   + 
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M + G + + ++Y  LI     +G    A  V + M     KP+   YS ++     R 
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +    +L+EM+S G+ P+ + + + I   G+   +  A     RM   G  PD +T+ 
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID     G+ + A+ELF +M+   + P   TY  +++   +    + +K     M A 
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------DQA 575
           G LP+VVT+T L+D   + G+ D+A   L+ +                         D+A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           +  F  M + GL+ +       I+ +G+     +A    + MK NG+ P++V
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIV 473



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 206/508 (40%), Gaps = 55/508 (10%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E+  E F   ++  L P  +TYN L+    +   ++ A+ L+S+M ++G   + +  
Sbjct: 486 GRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVII 545

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + +I +L + +++D +   K+++ ++  K+       N ++ G  K G   +A       
Sbjct: 546 NSLIDTLYKADRVDEA--WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGM 603

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
                 P T ++  ++  L  +G    A  +   + E    P    YN ++ G +K   +
Sbjct: 604 IADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRV 663

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYS 409
             A ++  +M++  + PD  T   L+      GR E A  V KE    V      SF + 
Sbjct: 664 NYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSF-WE 721

Query: 410 RILAGYRDRGEWQRTF------------------------------------QVLKEMKS 433
            ++ G     E  ++                                       LK  KS
Sbjct: 722 DLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKS 781

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P    YN +ID   K      A   F +M + G  PD  T+N  +D   K G+   
Sbjct: 782 FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +L+EEM  RG  P T T+NI+I  L +    +    L  ++ +    P   TY  L+D
Sbjct: 842 LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR ++A +  E + D            G  P+    N L+N FG+      A  +
Sbjct: 902 GLLKLGRLEEAKQFFEEMLDY-----------GCMPNCPLYNILMNGFGKQGDVETACEL 950

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
            + M + G++PD+ +Y+ ++  L  V K
Sbjct: 951 FRRMVKEGIRPDLKSYSIMVDCLCMVGK 978



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 26/316 (8%)

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V+EM R  V+    T + +++      R E   +V   M+    K +   Y  I      
Sbjct: 112 VAEMPR--VIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYI 169

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           RG  +     L++M+  G   + + Y  +I    K      A+  + RM+SEGI+P   T
Sbjct: 170 RGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKT 229

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++ L+    K    +    L +EM+  G  P   T+ I I +LG   + ++   +L  M 
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDA-------------------IECLEGLSDQ---- 574
             G  P+VVTYT L+D    +G+ ++A                   I  L+  SD     
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLD 349

Query: 575 AVNAF-RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           A+  F   M  DG  P  +    LI+A  +  +  EAF  L  MK+ G+ P++ TY TL+
Sbjct: 350 AIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409

Query: 634 KALIRVDKFHKVFSSY 649
             L+R+++  +    +
Sbjct: 410 CGLLRLNRLDEALELF 425



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 17/260 (6%)

Query: 395 EMEVSHAKPNSFIYS----RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++ V   KP S + S    R+L    D  +    F  + EM    V   T   N +++  
Sbjct: 75  DVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPR--VIHTTETCNYVLEML 132

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
             +  +   +  F+ M  + I+    T+ T+    +  G    A    E+M++ G+    
Sbjct: 133 RAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNG 192

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +Y  +I+LL +     +  ++   M ++G+ P++ TY+ L+   G+  R D  IE + G
Sbjct: 193 YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK--RRD--IETVMG 248

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           L  +       M + GL+P+       I   G   +  EA+ +L+ M + G  PDVVTYT
Sbjct: 249 LLQE-------MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301

Query: 631 TLMKALIRVDKFHKVFSSYL 650
            L+ AL    K +     +L
Sbjct: 302 VLIDALCNAGKLNNAKELFL 321


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 8/459 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI    +   ++    L+  M   G   + I+Y++VI  L R  ++    +  + 
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE--VSFVL 298

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+      LD    N +I G+ K G+  +A+         GL+P   TY ++I ++  +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A    ++++  GL P  + Y  L+ G+ + GY+ +A  V+ EM  +G  P   TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+ +   G+ E A  VL++M+     P+   YS +L+G+    +     +V +EM  
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PDT  Y+ +I  F +      A   ++ ML  G+ PD  T+  LI+ +   G  ++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L  EM E+G  P   TY+++IN L +Q R  + KRLL  +  +  +P+ VTY TL++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 554 IYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
               +  F   +      C++G+  +A   F  M     KP   A N +I+         
Sbjct: 599 -NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +A+ + + M ++G     VT   L+KAL +  K +++ S
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 184/390 (47%), Gaps = 25/390 (6%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           V+  +++     KA+  + +AQ  G  P   +Y AV+ A   S R I  AE VF+E+ ES
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            + P    YN L++G+   G +  A  +  +ME  G LP+  TY+ LID Y    + +  
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+ M +   +PN   Y+ ++ G    G  +    VL EM   G   D   YN +I  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K    H A+     ML  G+ P  IT+ +LI    K G  +RA E  ++M+ RG  P 
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY  +++   ++    +  R+L  M   G  P+VVTY  L++ +  +G+ +DAI  LE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 570 -----GLS-------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                GLS                   D+A+   R M   G+KP  +  +SLI  F E +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           R  EA  + + M   GL PD  TYT L+ A
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINA 529



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 208/445 (46%), Gaps = 12/445 (2%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T   ++ ++ + +R   ++KAL+++   +  G+    ++Y+ V+ +  R+ + + S  + 
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFAEN 191

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           ++KE+   ++  +    N +I GF  AG+   A+      +  G  P   TY  +I    
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              +  +   +   +   GL+P   +YN ++ G  + G +K+  FV++EM R G   DE 
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ LI  Y   G +  A ++  EM      P+   Y+ ++      G   R  + L +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G+ P+   Y  ++D F +   ++ A      M   G  P  +T+N LI+ H   G+ 
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A  + E+M+E+G  P   +Y+ +++        ++  R+   M  +G+ P+ +TY++L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  + +  R           + +A + +  M   GL P      +LINA+  +    +A 
Sbjct: 492 IQGFCEQRR-----------TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL 636
            +   M E G+ PDVVTY+ L+  L
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGL 565



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 202/421 (47%), Gaps = 28/421 (6%)

Query: 166 YSILIHALGRSEKLYE-AFLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I+ L R  ++ E +F+L++  R    L  +TYN LI    +  +  +AL + ++M 
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     I Y+ +I S+ +   ++ ++  +   ++    +  + +    ++ GF++ G 
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAM--EFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A R L      G SP   TY A+I     +G+  +A AV E++KE GL P   +Y+ 
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G+ +   + +A  V  EM   G+ PD  TYS LI  +    R + A  + +EM    
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ F Y+ ++  Y   G+ ++  Q+  EM   GV PD   Y+V+I+   K +    A 
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 461 AAFDRMLSEGIEPDTITWNTLID-C---HFK---------C--GRYDRAEELFEEMQERG 505
               ++  E   P  +T++TLI+ C    FK         C  G    A+++FE M  + 
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           + P  T YNIMI+      R  D+++   L   M   G L + VT   LV    + G+ +
Sbjct: 636 HKPDGTAYNIMIH---GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692

Query: 563 D 563
           +
Sbjct: 693 E 693



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGNMRAQGLLPNVVTYTT 550
           D+A  +    Q  G+ P   +YN +++     +R     + +   M    + PNV TY  
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  +           C  G  D A+  F  M T G  P+ +  N+LI+ + + ++  + 
Sbjct: 211 LIRGF-----------CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           F +L+ M   GL+P++++Y  ++  L R  +  +V
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294



 Score = 42.0 bits (97), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 22/192 (11%)

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           H +  F    +  I  + +   TL D        + A  +F+ +QE  Y  C +T ++  
Sbjct: 88  HILTKFKLYKTAQILAEDVAAKTLDD--------EYASLVFKSLQET-YDLCYSTSSVFD 138

Query: 518 NLLGEQERWEDVKRLLGNM---RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            ++    R   + + L  +   +A G +P V++Y  ++D   +S R     E        
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE-------- 190

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
             N F+ M    + P+    N LI  F        A  +   M+  G  P+VVTY TL+ 
Sbjct: 191 --NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 635 ALIRVDKFHKVF 646
              ++ K    F
Sbjct: 249 GYCKLRKIDDGF 260


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 240/533 (45%), Gaps = 65/533 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+    + ++  EA L+ +      L P   TY ALI    +  ++E+AL +  +M 
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I  + +  ++  ++   L+ E+    +E D    N +I G+ K+ D
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAM--SLFNEMLMAGLEPDTWTYNLLIDGYLKSHD 431

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            +KA   L   +   L+P   TY+ +I+ L +S    +A  V +++  +G+KP    Y  
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491

Query: 341 LLKGYVK----------------MGYLKD-------------------AEFVVSEMERSG 365
           L+K YV+                 G L D                   A+ ++ +M   G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P+ HTY   I+ Y+ +G  + A    K+M  S   PN+ IY+ ++ G+ D G      
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
              K M   G+ PD   Y+ +I +  K      AM  F + L  G+ PD   +N+LI   
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  ++A +L++EM   G  P    YN +IN L +       + L   +  + L+P+V
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA---FRVMRTDGL-KPSNL--------- 592
           VTY+T++D Y +SG   +A +  + +  + ++       +  DG  K  NL         
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 791

Query: 593 ----------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                     A NSLI++F +  +  EA  +   M +  L P++VTYT L+ A
Sbjct: 792 AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 240/509 (47%), Gaps = 24/509 (4%)

Query: 122 RAVPAPLWHS-LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSE 177
           +  P+P  +S L+  LC S S +  A  V+  + ++ +  +   +Y  LI A     R E
Sbjct: 446 KLTPSPFTYSVLISGLCHS-SDLQKANEVLDQMIRNGVKPNV-FMYGTLIKAYVQESRYE 503

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
              E   +     + P    YN LI    R   +E+A  L+  M + G   +   Y   I
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
              +++ +I  +  ++ +K++    I  +  +   +I G    G+  +A+         G
Sbjct: 564 NLYSKSGEIQVA--ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           L P    Y+A+I +LS +G+T EA  VF +  ++G+ P    YN+L+ G+ K G ++ A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +  EM  +G+ P+   Y+ LI+     G    AR +  E+E     P+   YS I+ GY
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGY 741

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G     F++  EM S G+ PD + Y ++ID  GK   L  A++ F     + +   +
Sbjct: 742 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             +N+LID   K G+   A ELF++M ++   P   TY I+I+  G+ E  E+ ++L  +
Sbjct: 802 -AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSG-RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           M  + ++PN +TYT+L+  Y Q G RF            + ++ F+ M   G+    +A 
Sbjct: 861 METRNIIPNTLTYTSLLLSYNQIGNRF------------KMISLFKDMEARGIACDAIAY 908

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLK 623
             + +A+ ++ +  EA  +L      G+K
Sbjct: 909 GVMASAYCKEGKSLEALKLLNKSLVEGIK 937



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 162/334 (48%), Gaps = 12/334 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   TY  VI A    G  I+ + V  E+ E   KP    YNA + G  + G + +A 
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            V   M   G+ PD HTY+LL+D +    R + A+++ + M  S   PN F Y+ ++ G+
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G  +   ++  EM + G++ +   YN MI    K   +  AM+ F+ ML  G+EPDT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            T+N LID + K     +A EL  EM+ R   P   TY+++I+ L      +    +L  
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M   G+ PNV  Y TL+  Y Q  R++ AIE L           ++M  +G+ P     N
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL-----------KIMIANGVLPDLFCYN 525

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            LI      ++  EA  +L  M E G+KP+  TY
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 213/458 (46%), Gaps = 20/458 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSL-LQK 251
           TY  +I A  +  D+ K   ++S+M ++   C  +   Y+  I  L +T  +D +L ++K
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKE---CKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  E     +  DG     ++ GF K   + +A          GL+P   TY A+I    
Sbjct: 301 LMME---KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   EA  + +E+   GLK     YNA++ G  K G +  A  + +EM  +G+ PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+LLID Y  +     A  +L EM+     P+ F YS +++G     + Q+  +VL +M
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             +GV+P+   Y  +I  + + +    A+     M++ G+ PD   +N LI    +  + 
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A+ L  +M E+G  P   TY   INL  +    +  +R   +M + G++PN V YT L
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  +           C  G + +A++ F+ M   GL P   A +++I++  ++ +  EA 
Sbjct: 598 IKGH-----------CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            V     + G+ PDV  Y +L+    +     K    Y
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 11/384 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N  I G  + G   +A+    +    GL P   TY  ++       R+ EA+ +FE +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SGL P    Y AL+ G++K G +++A  +  EM   G+  +  TY+ +I   A AG    
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  EM ++  +P+++ Y+ ++ GY    +  +  ++L EMK+  + P    Y+V+I 
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                + L  A    D+M+  G++P+   + TLI  + +  RY+ A EL + M   G  P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YN +I  L   ++ E+ K LL +M  +G+ PN  TY   +++Y +SG         
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI------- 572

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                 A   F+ M + G+ P+N+    LI    +     EA +  + M E GL PD+  
Sbjct: 573 ----QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 629 YTTLMKALIRVDKFHKVFSSYLFF 652
           Y+ ++ +L +  K  +    +L F
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKF 652



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 141/326 (43%), Gaps = 12/326 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA +VF      G  P     N L++  +K   +     V   M  + ++PD +TY+ +I
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            A+   G     ++VL EME    KPN F Y+  + G    G      +V K M   G+ 
Sbjct: 250 KAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG 308

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD H Y +++D F K      A   F+ M S G+ P+  T+  LID   K G  + A  +
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +EM  RG      TYN MI  + +         L   M   GL P+  TY  L+D Y +
Sbjct: 369 KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLK 428

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           S     A E L             M+   L PS    + LI+         +A  VL  M
Sbjct: 429 SHDMAKACELLAE-----------MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFH 643
             NG+KP+V  Y TL+KA ++  ++ 
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYE 503



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/407 (22%), Positives = 176/407 (43%), Gaps = 42/407 (10%)

Query: 166  YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            YS +IH+L ++ K  EA   FL   +  + P    YN+LIS   +  D+EKA  L  +M 
Sbjct: 629  YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             +G + + + Y+ +I  L +  ++  +  ++L+ EIE   +  D    + +I G+ K+G+
Sbjct: 689  HNGINPNIVVYNTLINGLCKLGEVTKA--RELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 281  ASKAMRFLGMAQGVGLSPKTATYA----------------------------------AV 306
             ++A +        G+SP    Y                                   ++
Sbjct: 747  LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSL 806

Query: 307  ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
            I +    G+ IEA  +F+++ +  L P    Y  L+  Y K   +++AE +  +ME   +
Sbjct: 807  IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 866

Query: 367  LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            +P+  TY+ L+ +Y   G       + K+ME      ++  Y  + + Y   G+     +
Sbjct: 867  IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 926

Query: 427  VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
            +L +    G++ +   ++ +I    K   +   +     M  E +   + T NTL+   +
Sbjct: 927  LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986

Query: 487  KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
            K G  D A ++   MQ  G+ P + +    I+  G  +   D+ ++L
Sbjct: 987  KSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS-TGRDDMKSDISQVL 1032



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 194/448 (43%), Gaps = 19/448 (4%)

Query: 164  LLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
            ++Y+ILI     +G + +    F     + L P    Y+A+I + ++N   ++A+ +  K
Sbjct: 592  VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 219  MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
              + G   D   Y+ +I    +   I+ +   +LY E+  + I  +  + N +I G  K 
Sbjct: 652  FLKTGVVPDVFLYNSLISGFCKEGDIEKA--SQLYDEMLHNGINPNIVVYNTLINGLCKL 709

Query: 279  GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            G+ +KA       +   L P   TY+ +I     SG   EA  +F+E+   G+ P    Y
Sbjct: 710  GEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIY 769

Query: 339  NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
              L+ G  K G L+ A  +  E ++  V      ++ LID++   G+   AR +  +M  
Sbjct: 770  CILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 399  SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                PN   Y+ ++  Y      +   Q+  +M++  + P+T  Y  ++ ++ +      
Sbjct: 829  KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 888

Query: 459  AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             ++ F  M + GI  D I +  +   + K G+   A +L  +    G       ++ +I 
Sbjct: 889  MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIF 948

Query: 519  LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             L ++++   V  LL  M  + L  +  T  TL+  + +SG             D+A   
Sbjct: 949  HLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGN-----------EDEASKV 997

Query: 579  FRVMRTDGLKPSNLALNSLINAFGEDQR 606
              VM+  G  P++L+L   I+   +D +
Sbjct: 998  LGVMQRLGWVPTSLSLTDSISTGRDDMK 1025



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 36/271 (13%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           H+YS+L     N+G    A  +L+++ +   KP   I   ++  YR+ G    T      
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKL-LQTRKPPLEILDSLVRCYREFGGSNLTV----- 174

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
                       +++ ID F     L+ A + F   +SEG  P  I  N L+    K   
Sbjct: 175 ------------FDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM 222

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV---KRLLGNMRAQGLLPNVVT 547
                +++  M E    P   TY    N++    +  DV   K +L  M  +   PN+ T
Sbjct: 223 MGLFWKVYGSMVEAKIVPDVYTYT---NVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFT 278

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y   +    Q+G  D+A+E             ++M   GL P       L++ F + +R 
Sbjct: 279 YNAFIGGLCQTGAVDEALE-----------VKKLMMEKGLGPDGHTYTLLVDGFCKQKRS 327

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            EA  + + M  +GL P+  TYT L+   I+
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 222/450 (49%), Gaps = 16/450 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            T+N LI+  +    L  A ++++K+ + GY  D +  + +++ L    K+  +L    +
Sbjct: 89  FTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEAL--NFH 146

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL-SPKTATYAAVITALSN 312
             +   +  LD      +I G  K+G+   A++ L   +G+ L  P    Y A+I +   
Sbjct: 147 DHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCK 206

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
               I+A  ++ E+    + P    +N+L+ G+  +G LK+A  +++EM  + V P+ +T
Sbjct: 207 DKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYT 266

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           +++LID     G  + A  VL  M     +PN   Y+ ++ GY    E  +   V   + 
Sbjct: 267 FNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTIS 326

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV P+ H Y+VMI+   K   +  A+  F  M  + + P+T+T+++LID   K GR  
Sbjct: 327 LRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRIS 386

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              +L +E+  RG      TYN ++N L +  + +    LL  M+ +G+ P++ TYTTLV
Sbjct: 387 DVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLV 446

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS-LINAFGEDQRDAEAF 611
           D   ++GR  DA    + L  +              P N+ + + +IN   ++    EA 
Sbjct: 447 DGLCKNGRLKDAQRIYQDLLCKGY------------PLNIRMYTVMINGLCKEGFFDEAL 494

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           ++L  M++NG  PD VTY TL+ AL + +K
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISALFKNNK 524



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 216/453 (47%), Gaps = 15/453 (3%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF 183
           P     ++L N  S    ++ A+++V+ + K  L Y  + +  + L+  L  + K+ EA 
Sbjct: 86  PEMFTFNILINCFSHLCQLNFAFSMVAKILK--LGYQPDTVTVNTLLRGLCLNGKVKEAL 143

Query: 184 -----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG---YHCDFINYSLVI 235
                ++ +R  L  ++Y  LI+   ++ +   AL L+ K+  +G      D I Y+ +I
Sbjct: 144 NFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAII 201

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
            S  +   +  +    LY E+   KI  +    N +I GF   G   +A+  L       
Sbjct: 202 DSFCKDKLVIDAY--DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           ++P   T+  +I  L   G   +A +V   + + G++P    Y +L+ GY  +  +  A+
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            V + +   GV P+ H+YS++I+        + A  + KEM + +  PN+  YS ++ G 
Sbjct: 320 HVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGL 379

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G     + ++ E+ + G   +   YN +++   K + +  A+A   +M  EGI+PD 
Sbjct: 380 CKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDM 439

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            T+ TL+D   K GR   A+ +++++  +GY      Y +MIN L ++  +++   LL  
Sbjct: 440 STYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
           M   G +P+ VTY TL+    ++ +   A++ L
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLL 532



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 223/461 (48%), Gaps = 29/461 (6%)

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI-NYSLVIQSLTRT 241
            LL++R  + PL   + I      D+L+ A++  + +     H   I  ++ ++ SL + 
Sbjct: 15  LLLNRRLHIQPLP--SFI------DNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKM 66

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           N    ++     +++E   I+ +    N +I  F+     + A   +     +G  P T 
Sbjct: 67  NHFKIAI--SFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTV 124

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T   ++  L  +G+  EA    + +          +Y  L+ G  K G  + A  ++ ++
Sbjct: 125 TVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI 184

Query: 362 ERSGVL---PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           E  G+L   PD   Y+ +ID++        A  +  EM V    PN   ++ ++ G+   
Sbjct: 185 E--GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIV 242

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+ +    +L EM  + V P+ + +N++ID   K   +  A +    M+ +G+EP+ +T+
Sbjct: 243 GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTY 302

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            +L+D +F     ++A+ +F  +  RG  P   +Y++MIN L + +  ++  +L   M  
Sbjct: 303 TSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHL 362

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL-ALNSL 597
           + + PN VTY++L+D   +SGR  D  + ++ ++++             +P+N+   NSL
Sbjct: 363 KNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG------------QPANIITYNSL 410

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +N   ++ +  +A A+L  MK+ G++PD+ TYTTL+  L +
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCK 451



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 165/378 (43%), Gaps = 38/378 (10%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P    +  ++++L        A +  ++++  G++P    +N L+  +  +  L  A  
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFS 109

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RIVLKEMEVSHAKPNSFIYSRI 411
           +V+++ + G  PD  T + L+      G+ + A      ++ K   +         Y  +
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVS-----YGTL 164

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           + G    GE +   Q+L++++    V PD   Y  +ID+F K   +  A   +  M+ + 
Sbjct: 165 INGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKK 224

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I P+ +T+N+LI      G+   A  L  EM      P   T+NI+I+ L ++   +   
Sbjct: 225 IYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKAT 284

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            +L  M  QG+ PNVVTYT+L+D Y      + A                          
Sbjct: 285 SVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGL 344

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C   + D+AV  F+ M    + P+ +  +SLI+   +  R ++ + ++  +   G   ++
Sbjct: 345 CKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANI 404

Query: 627 VTYTTLMKALIR---VDK 641
           +TY +L+  L +   VDK
Sbjct: 405 ITYNSLLNGLCKNHQVDK 422



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 125/276 (45%), Gaps = 29/276 (10%)

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           + +++  P  F +++IL+       ++      ++M+  G++P+   +N++I+ F     
Sbjct: 44  LHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQ 103

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L+ A +   ++L  G +PDT+T NTL+      G+   A    + +  + +     +Y  
Sbjct: 104 LNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGT 163

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLL---PNVVTYTTLVDIYGQSGRFDDAIE------ 566
           +IN L +        +LL   + +GLL   P+V+ YT ++D + +     DA +      
Sbjct: 164 LINGLCKSGETRAALQLL--RKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMI 221

Query: 567 ------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                             C+ G   +AV     M  + + P+    N LI+   ++    
Sbjct: 222 VKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVK 281

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +A +VL  M + G++P+VVTYT+LM     V + +K
Sbjct: 282 KATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNK 317


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 218/465 (46%), Gaps = 29/465 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++N LI        L  AL+   K+ + G+H   + ++ ++  L   +++  +L   L+ 
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--DLFH 74

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +     L+N    G  + G   +A+  L      GL P   TY  ++  +   G
Sbjct: 75  QMCKPNVVTFTTLMN----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 315 RTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            T+ A  +  +++E S +KP    Y+A++ G  K G   DA+ +  EM+  G+ PD  TY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+ + ++G+W  A+ +L+EM V    P+   +S ++      G+      +L+EM S
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLI 482
           SGV P+    N ++D       L  A+  F  M              G+EPD  T+N LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                 G++  AEEL+EEM  RG  P T TY+ MIN L +Q R ++  ++  +M ++   
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+VT+ TL+  Y ++G  DD +E            F  M   G+  + +   +LI  F 
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLE-----------LFCEMGRRGIVANAITYITLIRGFR 419

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +      +  + Q M  +G+ PD +T   ++  L   ++  K  +
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALA 464



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 228/511 (44%), Gaps = 67/511 (13%)

Query: 124 VPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLY 180
           +P  ++  + L+K  CS +    L +A+ ++ +   L +   L+ ++ L+H L   +++ 
Sbjct: 11  IPCDIYSFNILIKCFCSCSK---LPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 181 EAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           EA  L  Q  +   +T+  L++   R   + +A+ L+ +M +DG   + I Y  ++    
Sbjct: 68  EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD--- 124

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSP 298
                                             G  K GD   A+  L  M +   + P
Sbjct: 125 ----------------------------------GMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y+A+I  L   GR  +A+ +F E+++ G+ P    Y+ ++ G+   G   +A+ ++
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM    + PD  T+S LI+A    G   SA+ +L+EM  S   PN    + +L G  D 
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 419 GEWQRTFQVLKEMKSS-----------GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           G+ +   ++ K M+ S           GVEPD   YN++I           A   ++ M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             GI PDT+T++++I+   K  R D A ++F+ M  + + P   T+N +I    +    +
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           D   L   M  +G++ N +TY TL+  + + G  + +++            F+ M + G+
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD-----------IFQEMISSGV 439

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
            P  + + +++      +   +A A+L+ ++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 168/363 (46%), Gaps = 8/363 (2%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           +  G+ +     ++  +I    +  +   A + F +L + G  P    +N LL G     
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + +A  +  +M +    P+  T++ L++     GR   A  +L  M     +PN   Y 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 410 RILAGYRDRGEWQRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
            I+ G    G+      +L++M+  S ++PD   Y+ +ID   K      A   F  M  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +GI PD +T++ +I+     G++  A+ L +EM  R   P   T++ +IN L ++     
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            + LL  M + G+ PNVVT  TL+D    SG+  DA+E  + +    ++       +G++
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKV 645
           P     N LI+    + +  EA  + + M   G+ PD VTY++++  L    R+D+  ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 646 FSS 648
           F S
Sbjct: 361 FDS 363



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 129/283 (45%), Gaps = 14/283 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I+    S K  EA  L Q    ++++P  +T++ LI+A  +  DL  A +L+ +M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-----LQKLYKEIEC----DKIELDGQLLNDV 271
             G   + +  + ++  L  + K+  +L     +QK   +I+     + +E D Q  N +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G    G   +A          G+ P T TY+++I  L    R  EA  +F+ +     
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    +N L+ GY K G + D   +  EM R G++ +  TY  LI  +   G    +  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           + +EM  S   P++     +L G   + E ++   +L+E++ S
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 211/455 (46%), Gaps = 23/455 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N LI+       +    ++++K+ + GY    +  + +I+ L    ++  +L      
Sbjct: 344 TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFH--- 400

Query: 255 EIECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
               DK+   G  LN V     I G  K GD   A++ L    G    P    Y+ +I A
Sbjct: 401 ----DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 456

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L       EA  +F E+   G+      Y+ L+ G+  +G LK+A  +++EM    + PD
Sbjct: 457 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD 516

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY++L+DA    G+ + A+ VL  M  +  KP+ F Y+ ++ GY    E ++   V  
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFN 576

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   GV PD H Y ++I+ F K   +  A+  F  M  + + PDT+T+++L+D   K G
Sbjct: 577 AMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSG 636

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R     +L +EM++RG      TYN +I+ L +    +    L   M+ QG+ PN  T+T
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+D   + GR  DA E            F+ + T G        N +I    +     E
Sbjct: 697 ILLDGLCKGGRLKDAQE-----------VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEE 745

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           A  +L  M+ENG  P+ VT+  ++ AL + D+  K
Sbjct: 746 ALTMLSKMEENGCIPNAVTFDIIINALFKKDENDK 780



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 207/479 (43%), Gaps = 61/479 (12%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           +N D   +L++++K+ + GY  D +  + +I+ L    ++  +L          DK+   
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFH-------DKLLAQ 92

Query: 265 GQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           G  LN V     I G  + GD   A++FL    G    P    Y  +I AL       EA
Sbjct: 93  GFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEA 152

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +F E+   G+      Y+ L+ G+  +G LK+A  +++ M    + P+  TY++L+DA
Sbjct: 153 YGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDA 212

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
               G+ + A+ VL  M  +  K N   YS ++ GY    E ++   V   M   GV PD
Sbjct: 213 LCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 272

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRML-------------------------------- 467
            H YN+MI+ F K   +  A+  F  M+                                
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHR 332

Query: 468 --SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
              +GI+PD  T N LI+C    G+      +  ++ +RGY P T T N +I  L  + +
Sbjct: 333 LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 392

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            +        + AQG   N V+Y TL++   + G    AI+ L              + D
Sbjct: 393 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLR-------------KID 439

Query: 586 G--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           G   KP+    +++I+A  + Q  +EA+ +   M   G+  DVVTY+TL+     V K 
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 127/539 (23%), Positives = 238/539 (44%), Gaps = 33/539 (6%)

Query: 116 KLAESYRAVPAPLWHSLLKNLCSSNSSID--------------LAYAVVSWLQKHNLCYS 161
           KL E+   +   +  ++  N+C+ N  +D              LA  + + ++ + + YS
Sbjct: 183 KLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYS 242

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
             +    L++ + +++ ++ A  L     +TP   +YN +I+   +   ++KALNL  +M
Sbjct: 243 TLMDGYFLVYEVKKAQHVFNAMSL---MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
               +    I ++ ++ S  +     +++   L   +E   I+ D   LN +I  F   G
Sbjct: 300 ILSRFP-PIIQFNKILDSFAKMKHYSTAV--SLSHRLELKGIQPDLFTLNILINCFCHMG 356

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +     L      G  P T T   +I  L   G+  +A    ++L   G +    +Y 
Sbjct: 357 QITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 416

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G  K+G  + A  ++ +++     P+   YS +IDA         A  +  EM V 
Sbjct: 417 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 476

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
               +   YS ++ G+   G+ +    +L EM    + PD   Y +++D  GK   +  A
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +    ML   ++PD  T+NTL++ +       +A+ +F  M   G  P   TY I+IN 
Sbjct: 537 KSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 596

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             + +  ++   L   M  + ++P+ VTY++LVD   +SGR    I  +  L D+     
Sbjct: 597 FCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR----ISYVWDLIDE----- 647

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             MR  G     +  NSLI+   ++    +A A+   MK+ G++P+  T+T L+  L +
Sbjct: 648 --MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCK 704



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/523 (24%), Positives = 224/523 (42%), Gaps = 57/523 (10%)

Query: 169 LIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LI  L    ++ EA      LL+Q  +L  ++Y  LI+   R  D   A+  + K+    
Sbjct: 69  LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              +   Y+ +I +L +   +  +    L+ E+    I  +    + +I GF   G   +
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEA--YGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKE 186

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+  L +     ++P   TY  ++ AL   G+  EA++V   + ++ +K     Y+ L+ 
Sbjct: 187 ALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMD 246

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY  +  +K A+ V + M   GV PD H+Y+++I+ +    R + A  + KEM +S   P
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
               +++IL  +     +     +   ++  G++PD    N++I+ F     +    +  
Sbjct: 307 -IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL 365

Query: 464 DRMLSEGIEPDTITWNTLID--C---------HF------------------------KC 488
            ++L  G  P T+T NTLI   C         HF                        K 
Sbjct: 366 AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKI 425

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G    A +L  ++  R   P    Y+ +I+ L + +   +   L   M  +G+  +VVTY
Sbjct: 426 GDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 485

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           +TL  IYG          C+ G   +A+     M    + P       L++A G++ +  
Sbjct: 486 STL--IYG---------FCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVK 534

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           EA +VL  M +  +KPDV TY TLM   +    V K   VF++
Sbjct: 535 EAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 37/394 (9%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           LL+Q  +L  ++Y  LI+   +  D   A+ L+ K+       +   YS +I +L +   
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 462

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +    L+ E+    I  D    + +I GF   G   +A+  L       ++P   TY
Sbjct: 463 VSEA--YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++ AL   G+  EA++V   + ++ +KP    YN L+ GY+ +  +K A+ V + M  
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580

Query: 364 SGVLPDEHTY-----------------------------------SLLIDAYANAGRWES 388
            GV PD HTY                                   S L+D    +GR   
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              ++ EM       +   Y+ ++ G    G   +   +  +MK  G+ P+T  + +++D
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLD 700

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A   F  +L++G   D   +N +I  H K G  + A  +  +M+E G  P
Sbjct: 701 GLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIP 760

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              T++I+IN L +++  +  ++LL  M A+GLL
Sbjct: 761 NAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 31/499 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
           +S L  A+ ++++      L ++  L  + +N      +I+   R   L  A + M K+ 
Sbjct: 189 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 248

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  + I +S +I  L    ++ S  L+ + + +E    + D   +N ++ G   +G 
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRV-SEALELVDRMVEMGH-KPDLITINTLVNGLCLSGK 306

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++AM  +      G  P   TY  V+  +  SG+T  A  +  +++E  +K     Y+ 
Sbjct: 307 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G L +A  + +EME  G+  +  TY++LI  + NAGRW+    +L++M    
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   +S ++  +   G+ +   ++ KEM   G+ PDT  Y  +ID F K N L  A 
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D M+S+G +P+  T+N LI+ + K  R D   ELF +M  RG    T TYN +I   
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
            E  +    K L   M ++ + PN+VTY  L+D    +G  + A+E  E +         
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606

Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                           D A + F  +   G+KP     N +I    +    +EA  + + 
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666

Query: 617 MKENGLKPDVVTYTTLMKA 635
           M+E+G  PD  TY  L++A
Sbjct: 667 MEEDGHAPDGWTYNILIRA 685



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 203/457 (44%), Gaps = 13/457 (2%)

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           YE F+         L+Y   + +   +   + A++L   M         I++S +  ++ 
Sbjct: 138 YEDFIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA 197

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +T + D  L+  L K++E   I  +   L+ +I  F +      A   +G    +G  P 
Sbjct: 198 KTKQYD--LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 255

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T T++ +I  L   GR  EA  + + + E G KP     N L+ G    G   +A  ++ 
Sbjct: 256 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 315

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M   G  P+  TY  +++    +G+   A  +L++ME  + K ++  YS I+ G    G
Sbjct: 316 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                F +  EM+  G+  +   YN++I  F               M+   I P+ +T++
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 435

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID   K G+   AEEL +EM  RG  P T TY  +I+   ++   +   +++  M ++
Sbjct: 436 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 495

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PN+ T+  L++ Y ++ R DD +E            FR M   G+    +  N+LI 
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLE-----------LFRKMSLRGVVADTVTYNTLIQ 544

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            F E  +   A  + Q M    + P++VTY  L+  L
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 7/408 (1%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L++ L  S K  EA LL  +      +   +TY  +++   ++     A+ L+ KM +  
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D + YS++I  L +   +D++    L+ E+E   I  +    N +I GF  AG    
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAF--NLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
             + L       ++P   T++ +I +    G+  EAE + +E+   G+ P T  Y +L+ 
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G+ K  +L  A  +V  M   G  P+  T+++LI+ Y  A R +    + ++M +     
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           ++  Y+ ++ G+ + G+     ++ +EM S  V P+   Y +++D          A+  F
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           +++    +E D   +N +I       + D A +LF  +  +G  P   TYNIMI  L ++
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
               + + L   M   G  P+  TY  L+  +   G    +++ +E L
Sbjct: 655 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 8/409 (1%)

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           Y   P  + +  + N+   +    LA  ++  +++ N+     + YSI+I  L +   L 
Sbjct: 320 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD-AVKYSIIIDGLCKHGSLD 378

Query: 181 EAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            AF L     +  +T     YN LI         +    L+  M +   + + + +S++I
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 438

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
            S  +  K+  +  ++L+KE+    I  D      +I GF K     KA + + +    G
Sbjct: 439 DSFVKEGKLREA--EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   T+  +I     + R  +   +F ++   G+   T  YN L++G+ ++G L  A+
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +  EM    V P+  TY +L+D   + G  E A  + +++E S  + +  IY+ I+ G 
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
            +  +    + +   +   GV+P    YN+MI    K   L  A   F +M  +G  PD 
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            T+N LI  H   G   ++ +L EE++  G+    +T  ++I++L + +
Sbjct: 677 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 26/371 (7%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    ++ + +A++ + +     A+ ++++  G+       + ++  + +   L  A   
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + ++ + G  P+  T+S LI+     GR  E+  +V + +E+ H KP+    + ++ G  
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLC 302

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+      ++ +M   G +P+   Y  +++   K      AM    +M    I+ D +
Sbjct: 303 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 362

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            ++ +ID   K G  D A  LF EM+ +G      TYNI+I       RW+D  +LL +M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLS 572
             + + PNVVT++ L+D + + G+  +A E                        C E   
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+A     +M + G  P+    N LIN + +  R  +   + + M   G+  D VTY TL
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 633 MKALIRVDKFH 643
           ++    + K +
Sbjct: 543 IQGFCELGKLN 553



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 147/327 (44%), Gaps = 11/327 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F ++  S   P    ++ L     K         +  +ME  G+  + +T S++I
Sbjct: 169 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + +    +   A   + ++     +PN+  +S ++ G    G      +++  M   G +
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD    N +++          AM   D+M+  G +P+ +T+  +++   K G+   A EL
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M+ER        Y+I+I+ L +    ++   L   M  +G+  N++TY  L+  +  
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR+DD  + L  +  + +N           P+ +  + LI++F ++ +  EA  + + M
Sbjct: 409 AGRWDDGAKLLRDMIKRKIN-----------PNVVTFSVLIDSFVKEGKLREAEELHKEM 457

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
              G+ PD +TYT+L+    + +   K
Sbjct: 458 IHRGIAPDTITYTSLIDGFCKENHLDK 484


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 239/509 (46%), Gaps = 21/509 (4%)

Query: 139 SNSSIDLAYAVVSWLQKHNLCY-SYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP- 193
           SN+ +D A ++ + L + N    ++E  ++ ++ +L +S+  +    LSQ+     + P 
Sbjct: 62  SNNDVDDAVSLFNRLLRRNTTPPAFE--FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 119

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +  N LI+   +   +  A ++ +K+ + GY  D I ++ + + L    +I  + L   
Sbjct: 120 LVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFL--F 177

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           + ++       D      +I G  K G+   A+  L    G  + P    Y  +I ++  
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
                EA  +F E+   G+ P    Y+AL+ G+  +G LKDA  + ++M    + PD +T
Sbjct: 238 VKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           +++L++A+   G+ +  + V   M     KPN   Y+ ++ GY    E  +   +   M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV PD   Y++MI+ F K      AM  F  M  + I PD +T+++LID   K GR  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +L ++M +RG  P   TYN +++ L +  + +    LL   + +G  P++ TY+ L+
Sbjct: 418 YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               QSG+ +DA +  E L  +  N               A   +I  F  +    EA A
Sbjct: 478 KGLCQSGKLEDARKVFEDLLVKGYNL-----------DVYAYTIMIQGFCVEGLFNEALA 526

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +L  M++NG  PD  TY  ++ +L + D+
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDE 555



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 175/384 (45%), Gaps = 7/384 (1%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y  LIH L +  +   A  L QR     + P  + YN +I +  +   + +A +L S
Sbjct: 190 QISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFS 249

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + YS +I       K+  ++   L+ ++  + I+ D    N ++  F K
Sbjct: 250 EMVSKGISPDVVTYSALISGFCILGKLKDAI--DLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +      M    G+ P   TY +++          +A+++F  + + G+ P  ++
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ ++ G+ K+    +A  +  EM R  ++PD  TYS LID  + +GR   A  ++ +M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN   Y+ IL       +  +   +L + K  G +PD   Y+++I    +   L 
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ +L +G   D   +  +I      G ++ A  L  +M++ G  P   TY I+I
Sbjct: 488 DARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 518 NLLGEQERWEDVKRLLGNMRAQGL 541
             L +++  +  ++LL  M A+GL
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGL 571



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 11/353 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P       +I      G    A +VF ++ + G  P T  +  L KG    G ++ A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                ++   G   D+ +Y  LI      G   +A  +L+ ++ +  +PN  +Y+ I+  
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     F +  EM S G+ PD   Y+ +I  F     L  A+  F++M+ E I+PD
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N L++   K G+    + +F+ M ++G  P   TYN +++     +     K +  
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G+ P++ +Y+ +++ + +  +FD           +A+N F+ M    + P  +  
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFD-----------EAMNLFKEMHRKNIIPDVVTY 403

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +SLI+   +  R + A  ++  M + G+ P++ TY +++ AL +  +  K  +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 151/341 (44%), Gaps = 11/341 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y++  T   ++    +A ++F  L      P    +N +L   VK  +     ++  +M
Sbjct: 52  SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E  G+ P+    ++LI+ +   G    A  V  ++      P++  ++ +  G   +G+ 
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q+ F    ++ + G   D   Y  +I    K      A+    R+    ++P+ + +NT+
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K    + A +LF EM  +G  P   TY+ +I+      + +D   L   M  + +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+V T+  LV+ +           C +G   +    F +M   G+KP+ +  NSL++ +
Sbjct: 292 KPDVYTFNILVNAF-----------CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              +   +A ++   M + G+ PD+ +Y+ ++    ++ KF
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/359 (21%), Positives = 132/359 (36%), Gaps = 86/359 (23%)

Query: 361 MERSGVLPDEH-------TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           + R  V+PD H       ++  L + + N   + S++I            N   YS    
Sbjct: 11  LPRYCVVPDSHFVPKKFQSFQFLKNTHFNFIPYSSSKI------------NFISYSSTST 58

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
            +    +      +   +      P    +N ++ +  K    H  +    +M   GI+P
Sbjct: 59  TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT--------------------- 512
           + +  N LI+C  + G    A  +F ++ + GY P T T                     
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFH 178

Query: 513 --------------YNIMINLL---GEQERWED-VKRLLGNMRAQGLLPNVVTYTTLVDI 554
                         Y  +I+ L   GE     D ++R+ GN+    + PNVV Y T++D 
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL----VQPNVVMYNTIIDS 234

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
             +    ++A +                        C+ G    A++ F  M  + +KP 
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
               N L+NAF +D +  E   V   M + G+KP+ VTY +LM     V + +K  S +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 24/429 (5%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLY-KEIECDKI-----ELDGQLL-------NDVIVGFAK 277
           Y LV  S +  N    +++   Y K +E DK+     E++ + +       N ++    +
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGDA  AM  +      GL P   TY +V+  L  SG   +A  VF+E+ + G+ P  ++
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +  L+ G+ ++G +++A  +  EM   G+ PD  ++S LI  +A  G+ + A   L+EM 
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+  IY+ ++ G+   G      +V  EM   G  PD   YN +++   K   L 
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M   G+ PD  T+ TLI  +   G+ D+A +LF+ M  +   P   TYN +I
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + +  Q   +    L  +M ++ + PN VTY+ L+D + + G+ +DA     G  D+ +N
Sbjct: 383 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF----GFLDEMIN 438

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   G+ P+ +  NS+I  +      ++    LQ M  N + PD++TY TL+   I
Sbjct: 439 K-------GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 491

Query: 638 RVDKFHKVF 646
           + DK H  F
Sbjct: 492 KEDKMHDAF 500



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 230/495 (46%), Gaps = 20/495 (4%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           ++ N C +    D   AV+S ++K  + +   + +++++ A  R+     A      ++S
Sbjct: 101 MVHNYCKA-LEFDKVDAVISEMEKRCV-FPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 158

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +  +   +TYN+++    R+   +KA  +  +M   G   D  +++++I    R  +I+ 
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 218

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +L  K+YKE+    I+ D    + +I  FA+ G    AM +L   +  GL P    Y  V
Sbjct: 219 AL--KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I     +G   +A  V +E+   G  P    YN LL G  K   L DAE +++EM   GV
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  T++ LI  Y   G+ + A  +   M     +P+   Y+ ++ G   +G+  +   
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  +M S  + P+   Y+++ID+  +   +  A    D M+++GI P+ +T+N++I  + 
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G   + ++  ++M      P   TYN +I+   ++++  D  +LL  M  + + P+VV
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L++ +            + G   +A   F  M   G++P      S+IN       
Sbjct: 517 TYNMLINGFS-----------VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565

Query: 607 DAEAFAVLQYMKENG 621
             EAF +   M + G
Sbjct: 566 SKEAFQLHDEMLQRG 580



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 27/279 (9%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S+++ N++  + ++  Y    E+ +   V+ EM+   V PD   +NVM+D   +      
Sbjct: 89  SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 148

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AMA  D M+S+G++P  +T+N+++    + G +D+A E+F+EM + G  P   ++ I+I 
Sbjct: 149 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 208

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
                   E+  ++   MR +G+ P++V+++ L+ ++ + G+ D A+             
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  GL   A+     M   G  P  +  N+L+N   +++R  +A  +L
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             M+E G+ PD+ T+TTL+       ++DK  ++F + L
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 11/316 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP-------LTYNALISACARNDDLEKALNLM 216
           ++Y+++I    R+  + +A  L  R  +         +TYN L++   +   L  A  L+
Sbjct: 271 VIYTMVIGGFCRAGLMSDA--LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           ++MR+ G   D   ++ +I       K+D +L  +L+  +   ++  D    N +I G  
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL--QLFDTMLNQRLRPDIVTYNTLIDGMC 386

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + GD  KA           + P   TY+ +I +    G+  +A    +E+   G+ P   
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN+++KGY + G +   +  + +M  + V PD  TY+ LI  Y    +   A  +L  M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           E    +P+   Y+ ++ G+   G  Q    + ++M + G+EPD + Y  MI+        
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566

Query: 457 HHAMAAFDRMLSEGIE 472
             A    D ML  G E
Sbjct: 567 KEAFQLHDEMLQRGKE 582



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H A  A+  + S   E +T T N ++  + K   +D+ + +  EM++R  FP   T+N+M
Sbjct: 77  HLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVM 136

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           ++        E    L+ +M ++GL P +VTY +++    +SG +D A E          
Sbjct: 137 VDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGV 196

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         C  G  ++A+  ++ MR  G+KP  ++ + LI  F    +   A A
Sbjct: 197 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 256

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
            L+ M+  GL PD V YT ++    R
Sbjct: 257 YLREMRCFGLVPDGVIYTMVIGGFCR 282



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 11/215 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEAF---- 183
           +++L+  +C      DL  A   W   H+   +   + YSILI +     ++ +AF    
Sbjct: 378 YNTLIDGMCRQG---DLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++++      +TYN++I    R+ ++ K    + KM  +    D I Y+ +I    + +
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+  +   KL   +E +K++ D    N +I GF+  G+  +A          G+ P   T
Sbjct: 495 KMHDAF--KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 552

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           Y ++I     +G + EA  + +E+ + G + R  A
Sbjct: 553 YMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 216/469 (46%), Gaps = 34/469 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T + +I+   R   L  A + M K+ + GY  D + ++ ++  L    ++  +L      
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL------ 178

Query: 255 EIECDKIELDGQ----LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           E+    +E+  +     LN ++ G    G  S A+  +      G  P   TY  V+  +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             SG+T  A  +  +++E  +K     Y+ ++ G  K G L +A  + +EME  G   D 
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI  + NAGRW+    +L++M      PN   +S ++  +   G+ +   Q+LKE
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+ P+T  YN +ID F K N L  A+   D M+S+G +PD +T+N LI+ + K  R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D   ELF EM  RG    T TYN ++    +  + E  K+L   M ++ + P++V+Y  
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478

Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
           L+D    +G  + A+E                        C     D A + F  +   G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +K    A N +I+        ++A  + + M E G  PD +TY  L++A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 202/440 (45%), Gaps = 13/440 (2%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           + A++L   M Q       I+++ +  ++ +T + +  L+  L K++E   I      L+
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE--LVLALCKQMESKGIAHSIYTLS 127

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I  F +    S A   +G    +G  P T  +  ++  L    R  EA  + + + E 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP     N L+ G    G + DA  ++  M  +G  P+E TY  +++    +G+   A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L++ME  + K ++  YS I+ G    G     F +  EM+  G + D   YN +I  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F               M+   I P+ +T++ LID   K G+   A++L +EM +RG  P 
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T TYN +I+   ++ R E+  +++  M ++G  P+++T+  L++ Y ++ R DD +E   
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE--- 424

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    FR M   G+  + +  N+L+  F +  +   A  + Q M    ++PD+V+Y
Sbjct: 425 --------LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 630 TTLMKALIRVDKFHKVFSSY 649
             L+  L    +  K    +
Sbjct: 477 KILLDGLCDNGELEKALEIF 496



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 199/433 (45%), Gaps = 15/433 (3%)

Query: 128 LWHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           ++++LL  LC     + +++L   +V    K  L     +  + L++ L  + K+ +A +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL-----ITLNTLVNGLCLNGKVSDAVV 214

Query: 185 LSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L  R   T      +TY  +++   ++     A+ L+ KM +     D + YS++I  L 
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +D++    L+ E+E    + D    N +I GF  AG      + L       +SP 
Sbjct: 275 KDGSLDNAF--NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T++ +I +    G+  EA+ + +E+ + G+ P T  YN+L+ G+ K   L++A  +V 
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  PD  T+++LI+ Y  A R +    + +EM +     N+  Y+ ++ G+   G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   ++ +EM S  V PD   Y +++D       L  A+  F ++    +E D   + 
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +I       + D A +LF  +  +G       YNIMI+ L  ++       L   M  +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572

Query: 540 GLLPNVVTYTTLV 552
           G  P+ +TY  L+
Sbjct: 573 GHAPDELTYNILI 585



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 17/372 (4%)

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           +VG  KA DA    R   M Q   L P    +  + +A++ + +     A+ ++++  G+
Sbjct: 64  LVGI-KADDAVDLFR--DMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI 119

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-ESAR 390
                  + ++  + +   L  A   + ++ + G  PD   ++ L++      R  E+  
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           +V + +E+ H KP     + ++ G    G+      ++  M  +G +P+   Y  +++  
Sbjct: 180 LVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K      AM    +M    I+ D + ++ +ID   K G  D A  LF EM+ +G+    
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN +I       RW+D  +LL +M  + + PNVVT++ L+D + + G+  +A      
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA------ 352

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             DQ +   + M   G+ P+ +  NSLI+ F ++ R  EA  ++  M   G  PD++T+ 
Sbjct: 353 --DQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407

Query: 631 TLMKALIRVDKF 642
            L+    + ++ 
Sbjct: 408 ILINGYCKANRI 419


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 18/488 (3%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+ +  +  K+ +   LLS+ QR    P  +TYN LI+  ++  + E+A  L+ +M 
Sbjct: 237 YNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEML 296

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G       Y+ +I        +  +L   L +E+            N  I G  K G 
Sbjct: 297 KTGLKVSAYTYNPLIYGYFNKGMLAEAL--SLQEEMVLKGASPTVATYNSFIYGLCKLGR 354

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S AM+ L       L P   +Y  +I      G  ++A  +F+EL+   L P    YN 
Sbjct: 355 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 414

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  + G L+ A+ +  EM   G+ PD  TY++L++     G    A+    EM    
Sbjct: 415 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 474

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + +S+ Y+  + G    G+  R F + +EM + G  PD   YNV++D   K   L  A 
Sbjct: 475 LELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEAS 534

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               +M+S+G+ PD +T+ ++I  H + GR  +  E+F EM  +G  P   TY ++I+  
Sbjct: 535 ELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGH 594

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             + R E        M+ +G+LPNV+TY +L++   +  R            DQA N F 
Sbjct: 595 AGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM-----------DQAYNFFA 643

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G+ P+  +   LIN         EA ++ + M + G++PD  T++ L+K L +  
Sbjct: 644 EMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDC 703

Query: 641 KFHKVFSS 648
           K   V  +
Sbjct: 704 KLQAVHGT 711



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 215/464 (46%), Gaps = 15/464 (3%)

Query: 188 RQRLTPLTYNA-LISACARNDDL-EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           + RL+P   N   I    R+ DL  KA+ +   M + G     + Y+ ++ S  +  K+ 
Sbjct: 192 KSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQ 251

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             L   L  E++      +    N +I G +K G+  +A   +G     GL     TY  
Sbjct: 252 QGL--DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I    N G   EA ++ EE+   G  P    YN+ + G  K+G + DA   +S+M  + 
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +LPD  +Y+ LI  Y   G    A ++  E+   +  P    Y+ +L G   +GE +   
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQ 429

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+  EM + G+ PD   Y ++++   K   L  A   FD ML EG+E D+  + T I   
Sbjct: 430 QLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGE 489

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G   RA  L EEM  +G+ P    YN++++ L +    E+   LL  M + G++P+ 
Sbjct: 490 LKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTYT+++  + ++GR     E            F  M + GL PS +    LI+      
Sbjct: 550 VTYTSIIHAHLENGRLRKGREI-----------FYEMLSKGLTPSVVTYTVLIHGHAGKG 598

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           R   AF     M+E G+ P+V+TY +L+  L +V +  + ++ +
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 198/429 (46%), Gaps = 35/429 (8%)

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           C   E+  ++L+ +I  ++K     + +          LSP       ++  L +     
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  V+  + E G+KP    YN LL  Y K G ++    ++SEM+R G  P++ TY++LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +  +  G +E A+ ++ EM  +  K +++ Y+ ++ GY ++G       + +EM   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    YN  I    K   +  AM     ML+  + PD +++NTLI  + + G   +A  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F+E++    FP   TYN +++ L  Q   E  ++L   M  +G+ P++VTYT LV+   +
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 558 SGRFDDAIECL-----EGLS-DQAVNAFRV------------------MRTDGLKPSNLA 593
            G    A E       EGL  D    A R+                  M   G  P  + 
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
            N +++   +     EA  +LQ M  +G+ PD VTYT+++ A +   R+ K  ++F    
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF---- 572

Query: 651 FFNIYKMLS 659
               Y+MLS
Sbjct: 573 ----YEMLS 577



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 201/463 (43%), Gaps = 14/463 (3%)

Query: 117 LAESYRAVPAP--LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           L+E  R   AP  + +++L N  S     + A  ++  + K  L  S    Y+ LI+   
Sbjct: 257 LSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVS-AYTYNPLIYGYF 315

Query: 175 RSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
               L EA  L +   L     T  TYN+ I    +   +  A+  +S M  +    D +
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +Y+ +I    R   +  + L  L+ E+    +       N ++ G  + G+   A +   
Sbjct: 376 SYNTLIYGYCRLGNLMKAFL--LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G++P   TY  ++      G    A+  F+E+   GL+  + AY   + G +K+G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
               A  +  EM   G  PD   Y++++D     G  E A  +L++M      P+   Y+
Sbjct: 494 DTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYT 553

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            I+  + + G  ++  ++  EM S G+ P    Y V+I        L  A   F  M  +
Sbjct: 554 SIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P+ IT+N+LI+   K  R D+A   F EM E+G FP   +Y I+IN       W++ 
Sbjct: 614 GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEA 673

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             L   M  +G+ P+  T++ L+   G+    D  ++ + G S
Sbjct: 674 LSLYKQMLDRGVQPDSCTHSALLKQLGK----DCKLQAVHGTS 712


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 267/564 (47%), Gaps = 34/564 (6%)

Query: 87  LLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAP-LWHSLLKNLCSSNSSIDL 145
           LL  L E  + ++A  + ++  +L R +F         P P ++  +++ L ++  + DL
Sbjct: 47  LLTALREQPDPDAALRMLNA--ALAREDF--------APGPEVYEEIIRKLGAAAGAADL 96

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL--------TYN 197
              +V+ +++        +++S L  +  R +   +A  L   Q L PL         YN
Sbjct: 97  MKVLVTEMRREGHQVRVGVVHSFL-ESYARQQLFVDAVDLVLNQ-LDPLFGIQADTVVYN 154

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            L++       ++    + S+M + G   D + ++ ++++L R +++ +++L  + +E+ 
Sbjct: 155 HLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVL--MLEEMS 212

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      ++ GF + G    A+R       +G SP   T   +I      GR  
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVE 272

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A    ++   +G +P    YN  + G  + G++  A  V+  M + G  PD  TY++++
Sbjct: 273 DALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVV 332

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ E A+ +L +M      P+   ++ ++         +    + +++   G+ 
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLS 392

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD + +N++I+   K      A+  F+ M S G  PD +T+NTLID     G+  +A +L
Sbjct: 393 PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDL 452

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +EM+  G    T TYN +I+ L ++ R E+ + +   M  QG+  N +T+ TL+D   +
Sbjct: 453 LKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 512

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             R DDA        +Q ++    M ++GL+P+N+  NS++  + +     +A  +LQ M
Sbjct: 513 DKRIDDA--------NQLISQ---MISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
             NG + DVVTY TL+  L +  +
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGR 585



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 242/539 (44%), Gaps = 33/539 (6%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GRSEKLYEAFLLSQ 187
           HS L++       +D    V++ L       +  ++Y+ L++ L  G   KL E      
Sbjct: 117 HSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM 176

Query: 188 RQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
            +R + P  +T+N L+ A  R   +  A+ ++ +M   G   D   ++ ++Q       I
Sbjct: 177 GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSI 236

Query: 245 DSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            ++L ++    E+ C   ++    +N +I G+ K G    A+ ++      G  P   TY
Sbjct: 237 KAALRVKARMLEMGCSPTKVT---VNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITY 293

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
              +  L  +G    A  V + + + G  P    YN ++    K G L++A+ ++++M  
Sbjct: 294 NTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVE 353

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G LPD  T++ LI A  +  R E A  + +++ +    P+ + ++ ++      G+ Q 
Sbjct: 354 RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQL 413

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EMKSSG  PD   YN +ID       L  A+     M S G    T+T+NT+ID
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIID 473

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K  R + AEE+F++M  +G      T+N +I+ L + +R +D  +L+  M ++GL P
Sbjct: 474 GLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQP 533

Query: 544 NVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAF 579
           N +TY +++  Y + G    A +                        C  G +  A+   
Sbjct: 534 NNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLL 593

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           R MR  G++ +  A N +I +        +A  + + M E G  PD  TY  + + L R
Sbjct: 594 RGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCR 652



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 11/317 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++  T  YN LL   V+   +K  E V SEM   G+ PD  T++ L+ A   A +  +A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L+EM  S   P+   ++ ++ G+ + G  +   +V   M   G  P     NV+I+ 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A+    + ++ G EPD IT+NT ++   + G    A ++ + M + G+ P 
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI++N L +  + E+ K +L  M  +G LP++ T+ TL+       R ++A++   
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA- 383

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                     R +   GL P     N LINA  +      A  + + MK +G  PD VTY
Sbjct: 384 ----------RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY 433

Query: 630 TTLMKALIRVDKFHKVF 646
            TL+  L  + K  K  
Sbjct: 434 NTLIDNLCSLGKLGKAL 450



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDL 209
           K + C   E+ Y+ LI  L    KL +A  LL + +      + +TYN +I    +   +
Sbjct: 422 KSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRI 481

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L +  +ID +   +L  ++  + ++ +    N
Sbjct: 482 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDA--NQLISQMISEGLQPNNITYN 539

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  +   ++  
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G++   KAYN +++   +    +DA  +  EM   G  PD  TY ++       G
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 139/318 (43%), Gaps = 26/318 (8%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPL-WHSLLK 134
            L    Y F  L+N L +  + + A  L           F+  +S    P  + +++L+ 
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRL-----------FEEMKSSGCTPDEVTYNTLID 438

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL--- 191
           NLCS    +  A  ++  ++    C    + Y+ +I  L +  ++ EA  +  +  L   
Sbjct: 439 NLCSL-GKLGKALDLLKEMESAG-CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 192 --TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
               +T+N LI    ++  ++ A  L+S+M  +G   + I Y+ ++    +   I  +  
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKA-- 554

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GM-AQGVGLSPKTATYAAVI 307
             + + +  +  E+D      +I G  KAG    A++ L GM  +G+  +PK   Y  VI
Sbjct: 555 ADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKA--YNPVI 612

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG-YLKDAEFVVSEMERSGV 366
            +L     T +A  +F E+ E G  P    Y  + +G  + G  +++A   + EM   G 
Sbjct: 613 QSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGF 672

Query: 367 LPDEHTYSLLIDAYANAG 384
           +P+  ++ +L +   N G
Sbjct: 673 IPEFSSFRMLAEGLLNLG 690


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 24/429 (5%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLY-KEIECDKI-----ELDGQLL-------NDVIVGFAK 277
           Y LV  S +  N    +++   Y K +E DK+     E++ + +       N ++    +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGDA  AM  +      GL P   TY +V+  L  SG   +A  VF+E+ + G+ P  ++
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +  L+ G+ ++G +++A  +  EM   G+ PD  ++S LI  +A  G+ + A   L+EM 
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+  IY+ ++ G+   G      +V  EM   G  PD   YN +++   K   L 
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M   G+ PD  T+ TLI  +   G+ D+A +LF+ M  +   P   TYN +I
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + +  Q   +    L  +M ++ + PN VTY+ L+D + + G+ +DA     G  D+ +N
Sbjct: 444 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF----GFLDEMIN 499

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   G+ P+ +  NS+I  +      ++    LQ M  N + PD++TY TL+   I
Sbjct: 500 K-------GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI 552

Query: 638 RVDKFHKVF 646
           + DK H  F
Sbjct: 553 KEDKMHDAF 561



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 232/499 (46%), Gaps = 20/499 (4%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           ++ N C +    D   AV+S ++K  + +   + +++++ A  R+     A      ++S
Sbjct: 162 MVHNYCKA-LEFDKVDAVISEMEKRCV-FPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 219

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +  +   +TYN+++    R+   +KA  +  +M   G   D  +++++I    R  +I+ 
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 279

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +L  K+YKE+    I+ D    + +I  FA+ G    AM +L   +  GL P    Y  V
Sbjct: 280 AL--KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I     +G   +A  V +E+   G  P    YN LL G  K   L DAE +++EM   GV
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  T++ LI  Y   G+ + A  +   M     +P+   Y+ ++ G   +G+  +   
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  +M S  + P+   Y+++ID+  +   +  A    D M+++GI P+ +T+N++I  + 
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G   + ++  ++M      P   TYN +I+   ++++  D  +LL  M  + + P+VV
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 577

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L++ +            + G   +A   F  M   G++P      S+IN       
Sbjct: 578 TYNMLINGFS-----------VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626

Query: 607 DAEAFAVLQYMKENGLKPD 625
             EAF +   M + G  PD
Sbjct: 627 SKEAFQLHDEMLQRGFAPD 645



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 27/279 (9%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S+++ N++  + ++  Y    E+ +   V+ EM+   V PD   +NVM+D   +      
Sbjct: 150 SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 209

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AMA  D M+S+G++P  +T+N+++    + G +D+A E+F+EM + G  P   ++ I+I 
Sbjct: 210 AMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIG 269

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
                   E+  ++   MR +G+ P++V+++ L+ ++ + G+ D A+             
Sbjct: 270 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  GL   A+     M   G  P  +  N+L+N   +++R  +A  +L
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             M+E G+ PD+ T+TTL+       ++DK  ++F + L
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 7/289 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA--FLLSQRQRLTP---LTYNALISACARNDDLEKAL 213
           C    + Y+ L++ L +  +L +A   L   R+R  P    T+  LI        L+KAL
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L   M       D + Y+ +I  + R   +D +    L+ ++   +I  +    + +I 
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA--NDLWDDMHSREIFPNHVTYSILID 479

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
              + G    A  FL      G+ P   TY ++I     SG   + +   +++  + + P
Sbjct: 480 SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSP 539

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN L+ GY+K   + DA  +++ ME+  V PD  TY++LI+ ++  G  + A  + 
Sbjct: 540 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIF 599

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           ++M     +P+ + Y  ++ G+   G  +  FQ+  EM   G  PD  F
Sbjct: 600 EKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 24/206 (11%)

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H A  A+  + S   E +T T N ++  + K   +D+ + +  EM++R  FP   T+N+M
Sbjct: 138 HLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVM 197

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           ++        E    L+ +M ++GL P +VTY +++    +SG +D A E          
Sbjct: 198 VDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGV 257

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         C  G  ++A+  ++ MR  G+KP  ++ + LI  F    +   A A
Sbjct: 258 APDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMA 317

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
            L+ M+  GL PD V YT ++    R
Sbjct: 318 YLREMRCFGLVPDGVIYTMVIGGFCR 343


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 257/552 (46%), Gaps = 28/552 (5%)

Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           L S+ + +N+ E  ++   +     + H     S+  N     S + LA AV++ + K  
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146

Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
           L Y  +++  S L++    S+++ +A  L  +      +    T+  LI     ++   +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A+ L+ +M Q G   D + Y  V+  L +   ID +L   L K++E  KIE D  + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--SLLKKMEKGKIEADVVIYNTI 264

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  K      A+         G+ P   TY+++I+ L N GR  +A  +  ++ E  +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    ++AL+  +VK G L +AE +  EM +  + PD  TYS LI+ +    R + A+ 
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + + M      PN   YS ++ G+      +   ++ +EM   G+  +T  Y  +I  F 
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +     +A   F +M+S G+ P+ +T+N L+D   K G+  +A  +FE +Q     P   
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYNIMI  + +  + ED   L  N+  +G+ PNV+ Y T++  +           C +G 
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF-----------CRKGS 553

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            ++A +  + M+ DG  P++   N+LI A   D     +  +++ M+  G   D  T   
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613

Query: 632 LMKALI--RVDK 641
           +   L   R+DK
Sbjct: 614 VTNMLHDGRLDK 625



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 218/448 (48%), Gaps = 17/448 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           +N L+SA A+ +  E  ++L  +M+  G   D   YS+ I    R +++  +L  L K+ 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       E D   L+ ++ G+  +   S A+  +     +G  P T T+  +I  L   
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA A+ +++ + G +P    Y  ++ G  K G +  A  ++ +ME+  +  D   Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +ID        + A  +  EM+    +P+ F YS +++   + G W    ++L +M  
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   ++ +ID F K   L  A   +D M+   I+PD  T+++LI+      R D 
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +FE M  +  FP   TY+ +I    + +R E+   L   M  +GL+ N VTYTTL  
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL-- 439

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           I+G    F  A +C     D A   F+ M + G+ P+ L  N L++   ++ + A+A  V
Sbjct: 440 IHG----FFQARDC-----DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +Y++ + ++PD+ TY  +++ + +  K
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGK 518



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 175/374 (46%), Gaps = 15/374 (4%)

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           Q +G+S    TY+  I       +   A AV  ++ + G +P     ++LL GY     +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            DA  +V +M   G  PD  T++ LI       +   A  ++ +M     +P+   Y  +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G   RG+      +LK+M+   +E D   YN +ID   KY  +  A+  F  M ++GI
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD  T+++LI C    GR+  A  L  +M ER   P   T++ +I+   ++ +  + ++
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  + + P++ TY++L++ +           C+    D+A + F +M +    P+ 
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGF-----------CMHDRLDEAKHMFELMISKDCFPNV 398

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
           +  ++LI  F + +R  E   + + M + GL  + VTYTTL+    +    D    VF  
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458

Query: 649 YLFFNIY-KMLSYS 661
            +   ++  +L+Y+
Sbjct: 459 MVSVGVHPNILTYN 472



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)

Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ER +   +  Y  I+ N L +  + +D   L G+M      P++V +  L+    +  +F
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
           +  I   E     G+S         +N F              ++M+  G +P  + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           L+N +   +R ++A A++  M E G KPD  T+TTL+  L
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 212/448 (47%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            T+N LI+       L  A ++++K+ + G+H D +  + +I+ L    K+  +L    +
Sbjct: 100 FTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL--HFH 157

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++      LD      +I G  K G+   A++ L    G+ + P    Y  +I +L   
Sbjct: 158 DDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKD 217

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
              I A  +  E+    + P    Y  L+ G + +G LK+A  + ++M    + PD +T+
Sbjct: 218 KLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTF 277

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+D     G  + AR VL  M       N   Y+ ++ GY    +  +   V   M  
Sbjct: 278 NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMAR 337

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD   Y++MI+   K   +  A+  F  M S+ + P+T+T+N+LID   K GR   
Sbjct: 338 RGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISD 397

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L  EM  RG      TY+ +++ L +  + +    L+  ++ QG+ PN+ TYT LVD
Sbjct: 398 AWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVD 457

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++GR  DA         QAV  ++ +   G        N ++N   ++    EA ++
Sbjct: 458 GLCKNGRLKDA---------QAV--YQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSL 506

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +  M++NG  PD VTY TL++AL   DK
Sbjct: 507 VSKMEDNGCIPDAVTYETLVRALFENDK 534



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 195/413 (47%), Gaps = 21/413 (5%)

Query: 235 IQSLTRTNKIDSSLLQ--------KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +Q +   NKI SSL++           K++E  +I+ D    N +I  F   G  + A  
Sbjct: 61  VQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFS 120

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L     +G  P T T   +I  L  +G+  EA    +++   G      +Y  L+ G  
Sbjct: 121 VLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLC 180

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G  + A  V+ +++   V P+   Y+ +ID+         A  +  EM V    P+  
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G  +    +  +M    ++PD + +N+++D   K   +  A      M
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           + +G++ + +T+N+L+D +F   + ++A  +F  M  RG  P   +Y+IMIN L + +  
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   L   M ++ + PN VTY +L+D   + GR  DA + +  + ++            
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG----------- 409

Query: 587 LKPSN-LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +P++ +  +SL++A  ++ +  +A  ++  +K+ G++P++ TYT L+  L +
Sbjct: 410 -QPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 203/456 (44%), Gaps = 8/456 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P     ++L N       ++ A++V++ + K    +   +  + LI  L  + K+ EA  
Sbjct: 97  PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGF-HPDTVTITTLIKGLCLNGKVREALH 155

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++++   L  ++Y  LI+   +  +   AL ++ K+       + + Y+ +I SL 
Sbjct: 156 FHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLC 215

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +  +    L  E+   +I  D      +I G    G   +A+          + P 
Sbjct: 216 KDKLVIHA--SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPD 273

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  ++  L   G   +A  V   + + G+      YN+L+ GY  +     A FV +
Sbjct: 274 VYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFN 333

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M R GV PD  +YS++I+        + A  + KEM      PN+  Y+ ++ G    G
Sbjct: 334 TMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYG 393

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                + ++ EM + G   D   Y+ ++D   K + +  A+    ++  +GI+P+  T+ 
Sbjct: 394 RISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYT 453

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            L+D   K GR   A+ +++++  +GY      YN+M+N L ++  +++   L+  M   
Sbjct: 454 ILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN 513

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           G +P+ VTY TLV    ++ + D A++ L  +  Q 
Sbjct: 514 GCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 29/344 (8%)

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ELK+  ++P    +N L+  +  +G+L  A  V++++ + G  PD  T + LI      G
Sbjct: 91  ELKQ--IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNG 148

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   A     ++       +   Y  ++ G    GE +   QVL+++    V+P+   YN
Sbjct: 149 KVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYN 208

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID+  K   + HA      M+ + I PD +T+ TLI      GR   A  LF +M  +
Sbjct: 209 TIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLK 268

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY--------- 555
              P   T+NI+++ L ++   +  + +L  M  QG+  N+VTY +L+D Y         
Sbjct: 269 NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKA 328

Query: 556 -------GQSGRFDDAIE--------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
                   + G   D           C   + D+AVN F+ M +  + P+ +  NSLI+ 
Sbjct: 329 TFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDG 388

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDK 641
             +  R ++A+ ++  M   G   DV+TY++L+ AL +   VDK
Sbjct: 389 LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDK 432



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 42/249 (16%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YSI+I+ L +++ + EA  L +    + + P  +TYN+LI    +   +  A +L+++M 
Sbjct: 347 YSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMH 406

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I YS ++ +L + +++D                                   
Sbjct: 407 NRGQPADVITYSSLLDALCKNHQVD----------------------------------- 431

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+  +   +  G+ P   TY  ++  L  +GR  +A+AV+++L   G     K YN 
Sbjct: 432 --KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G   +A  +VS+ME +G +PD  TY  L+ A     + + A  +L+EM V  
Sbjct: 490 MVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549

Query: 401 AKPNSFIYS 409
           +   S I S
Sbjct: 550 SAVGSNISS 558


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 214/454 (47%), Gaps = 29/454 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++N LI        L  AL+   K+ + G+H   + ++ ++  L   +++  +L   L+ 
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--DLFH 74

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +     L+N    G  + G   +A+  L      GL P   TY  ++  +   G
Sbjct: 75  QMCKPNVVTFTTLMN----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 315 RTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            T+ A  +  +++E S +KP    Y+A++ G  K G   DA+ +  EM+  G+ PD  TY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+ + ++G+W  A+ +L+EM V    P+   +S ++      G+      +L+EM S
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-----------EGIEPDTITWNTLI 482
           SGV P+    N ++D       L  A+  F  M              G+EPD  T+N LI
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                 G++  AEEL+EEM  RG  P T TY+ MIN L +Q R ++  ++  +M ++   
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+VT+ TL+  Y ++G  DD +E            F  M   G+  + +   +LI  F 
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLE-----------LFCEMGRRGIVANAITYITLIRGFR 419

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +      +  + Q M  +G+ PD +T   ++  L
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 227/511 (44%), Gaps = 67/511 (13%)

Query: 124 VPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLY 180
           +P  ++  + L+K  CS +    L +A+ ++ +   L +   L+ ++ L+H L   +++ 
Sbjct: 11  IPCDIYSFNILIKCFCSCSK---LPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 181 EAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           EA  L  Q  +   +T+  L++   R   + +A+ L+ +M +DG   + I Y  ++    
Sbjct: 68  EALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD--- 124

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSP 298
                                             G  K GD   A+  L  M +   + P
Sbjct: 125 ----------------------------------GMCKMGDTVSALNLLRKMEELSHIKP 150

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y+A+I  L   GR  +A+ +F E+++ G+ P    Y+ ++ G+   G   +A+ ++
Sbjct: 151 DVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLL 210

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM    + PD  T+S LI+A    G   SA+ +L+EM  S   PN    + +L G  D 
Sbjct: 211 QEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDS 270

Query: 419 GEWQRTFQVLKEMKSS-----------GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           G+ +   ++ K M+ S           GVEPD   YN++I           A   ++ M 
Sbjct: 271 GKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 330

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             GI PDT+T++++I+   K  R D A ++F+ M  + + P   T+N +I    +    +
Sbjct: 331 HRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVD 390

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           D   L   M  +G++ N +TY TL+  + + G  + +++            F+ M + G+
Sbjct: 391 DGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD-----------IFQEMISSGV 439

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
            P  + + +++      +    A A+L+ ++
Sbjct: 440 YPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 30/373 (8%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   T+  ++  L   GR +EA A+ + + E GL+P    Y  ++ G  KMG    A  +
Sbjct: 79  PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138

Query: 358 VSEMER-SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + +ME  S + PD   YS +ID     GR   A+ +  EM+     P+   YS ++ G+ 
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+W    ++L+EM    + PD   ++ +I+   K   L+ A      M+S G+ P+ +
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQER 525
           T NTL+D     G+   A E+F+ MQ+            G  P   TYNI+I+ L  + +
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           + + + L   M  +G++P+ VTY+++++   +  R D+A +            F  M + 
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ-----------MFDSMGSK 367

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV------ 639
              P+ +  N+LI  + +     +   +   M   G+  + +TY TL++   +V      
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427

Query: 640 -DKFHKVFSSYLF 651
            D F ++ SS ++
Sbjct: 428 LDIFQEMISSGVY 440



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 168/363 (46%), Gaps = 8/363 (2%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           +  G+ +     ++  +I    +  +   A + F +L + G  P    +N LL G     
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + +A  +  +M +    P+  T++ L++     GR   A  +L  M     +PN   Y 
Sbjct: 65  RVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 410 RILAGYRDRGEWQRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
            I+ G    G+      +L++M+  S ++PD   Y+ +ID   K      A   F  M  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +GI PD +T++ +I+     G++  A+ L +EM  R   P   T++ +IN L ++     
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            + LL  M + G+ PNVVT  TL+D    SG+  DA+E  + +    ++       +G++
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKV 645
           P     N LI+    + +  EA  + + M   G+ PD VTY++++  L    R+D+  ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 646 FSS 648
           F S
Sbjct: 361 FDS 363



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 14/283 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I+    S K  EA  L Q    ++++P  +T++ LI+A  +  DL  A +L+ +M 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-----LQKLYKEIEC----DKIELDGQLLNDV 271
             G   + +  + ++  L  + K+  +L     +QK   +I+     + +E D Q  N +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G    G   +A          G+ P T TY+++I  L    R  EA  +F+ +     
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    +N L+ GY K G + D   +  EM R G++ +  TY  LI  +   G    +  
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           + +EM  S   P++     +L G   + E +R   +L+E++ S
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 235/488 (48%), Gaps = 23/488 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNL-MSKM 219
           Y+ILI    R+++L   F     ++ +  R+  +T+  L+     +     A+++ + +M
Sbjct: 90  YAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +     D  + +++++ L   N+   +L L  +  +        D      VI GF K 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKE 209

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD+ KA           +SP   TY+++I AL       +A  V   + ++G+ P  + Y
Sbjct: 210 GDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTY 269

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDE-----HTYSLLIDAYANAGRWESARIVL 393
            +++ GY   G  K+A   + ++   GV PD       TY  L+  YA  G       +L
Sbjct: 270 TSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALL 329

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M  +   P+ ++Y+ ++  Y  +G+      V  +M+  G+ PD   Y  +I    K 
Sbjct: 330 DLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKS 389

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  AM  F++M+ EG+ P  I +N+LI     C +++RAEEL  EM +RG    T  +
Sbjct: 390 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 449

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +I+   ++ R  + ++L   M   G+ P+++TY+TL+D Y  +G+ D+A++ L G   
Sbjct: 450 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG--- 506

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M + GLKP+ +   +LIN + +  R  +A  + + M+ +G+ PD++TY  ++
Sbjct: 507 --------MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 634 KALIRVDK 641
           + L +  +
Sbjct: 559 QGLFQTRR 566



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 218/463 (47%), Gaps = 22/463 (4%)

Query: 190 RLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT---RTNKI 244
           ++TP   TY  LI  C R D L+     +  + + G+  + I ++ +++ L    RT+  
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
              +L+++  E+ C        +L   +    ++ +A +    +   +G G +P   +Y 
Sbjct: 142 MDIVLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYT 200

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            VI      G + +A + + E+ +  + P    Y++++    K   +  A  V++ M ++
Sbjct: 201 TVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKN 260

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF-----IYSRILAGYRDRG 419
           GV+P+  TY+ ++  Y ++G+ + A   LK++     +P+        Y  +L GY  +G
Sbjct: 261 GVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKG 320

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                  +L  M  +G+ PD + YN++I  + K   +  AM  F +M  +G+ PD +T+ 
Sbjct: 321 ALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYG 380

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +I    K GR + A   FE+M + G  P    YN +I+ L    +WE  + L+  M  +
Sbjct: 381 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 440

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+  N + + +++D +           C EG   ++   F +M   G+KP  +  ++LI+
Sbjct: 441 GICLNTIFFNSIIDSH-----------CKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +    +  EA  +L  M   GLKP+ VTY TL+    ++ + 
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 244/551 (44%), Gaps = 40/551 (7%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + + + C       +IL+  L    +  EA 
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS-CMPDVFSCTILLKGLCDENRSQEAL 178

Query: 184 LL------SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            L       +     P  ++Y  +I+   +  D  KA +   +M       D + YS +I
Sbjct: 179 ELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSII 238

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ--G 293
            +L +   +D ++  ++   +  + +  + +    ++ G+  +G   +A+ FL   +  G
Sbjct: 239 AALCKGQAMDKAM--EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDG 296

Query: 294 V---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           V   GL P  ATY  ++   +  G  +   A+ + +  +G+ P    YN L+  Y K G 
Sbjct: 297 VEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGK 356

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A  V S+M + G+ PD  TY  +I     +GR E A +  ++M      P + +Y+ 
Sbjct: 357 VDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 416

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G     +W+R  +++ EM   G+  +T F+N +ID+  K   +  +   FD M+  G
Sbjct: 417 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 476

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           ++PD IT++TLID +   G+ D A +L   M   G  P T TY  +IN   +  R  D  
Sbjct: 477 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL 536

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            L   M + G+ P+++TY  ++    Q+ R   A E                        
Sbjct: 537 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 596

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C   L+D A+  F+ +    LK      N +I+A  +  R+ EA  +      NGL P+ 
Sbjct: 597 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNY 656

Query: 627 VTYTTLMKALI 637
            TY  + + +I
Sbjct: 657 WTYRLMAENII 667



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 163/348 (46%), Gaps = 6/348 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN LI A A+   +++A+ + SKMRQ G + D + Y  VI  L ++ +++ ++L   Y 
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAML---YF 399

Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E   D+    G ++ N +I G        +A   +      G+   T  + ++I +    
Sbjct: 400 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 459

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR IE+E +F+ +   G+KP    Y+ L+ GY   G + +A  ++S M   G+ P+  TY
Sbjct: 460 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 519

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             LI+ Y    R   A ++ KEME S   P+   Y+ IL G           ++   +  
Sbjct: 520 RTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 579

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG + +   YN+++    K      A+  F  +    ++ +  T+N +ID   K GR   
Sbjct: 580 SGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGE 639

Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
           A++LF      G  P   TY +M  N++G Q   E++ +L  +M   G
Sbjct: 640 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 686



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/394 (21%), Positives = 157/394 (39%), Gaps = 34/394 (8%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQ-GVG-LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           LN  +   A+   A+   R+  MA+ G G ++P   TYA +I     + R     A    
Sbjct: 53  LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGN 112

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           + + G +     +  LLKG        DA + V+  M     +PD  + ++L+    +  
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN 172

Query: 385 RWESARIVLKEMEVSH---------AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           R + A      +E+ H         + P+   Y+ ++ G+   G+  + +    EM    
Sbjct: 173 RSQEA------LELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRR 226

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PD   Y+ +I    K   +  AM     M+  G+ P+  T+ +++  +   G+   A 
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAI 286

Query: 496 ELFEEMQERGYFPC-----TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              ++++  G  P        TY  ++     +     +  LL  M   G+ P+   Y  
Sbjct: 287 GFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNI 346

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  Y + G+ D+A+             F  MR  GL P  +   ++I    +  R  +A
Sbjct: 347 LICAYAKQGKVDEAML-----------VFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDA 395

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               + M + GL P  + Y +L+  L   +K+ +
Sbjct: 396 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 149/340 (43%), Gaps = 15/340 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
           +++SL+  LC+ N   + A  ++  +    +C +     SI+      GR   SEKL++ 
Sbjct: 413 VYNSLIHGLCTCNK-WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD- 470

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             L  R  + P  +TY+ LI        +++A+ L+S M   G   + + Y  +I    +
Sbjct: 471 --LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            +++  +L+  L+KE+E   +  D    N ++ G  +    + A          G   + 
Sbjct: 529 ISRMGDALV--LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 586

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY  ++  L  +  T +A  +F+ L    LK   + +N ++   +K+G   +A+ +   
Sbjct: 587 STYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVA 646

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
              +G++P+  TY L+ +     G  E    +   ME +    +S + + I+     RGE
Sbjct: 647 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 706

Query: 421 WQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
             R  T+  + + K   +E  T    + + + GKY   H 
Sbjct: 707 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHR 746



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I      +R +     LGN+  +G     +T+T L+       R  DA++ 
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M      P   +   L+    ++ R  EA  +   M +    G  P
Sbjct: 145 V----------LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAP 194

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+YTT++    +     K +S+Y
Sbjct: 195 DVVSYTTVINGFFKEGDSGKAYSTY 219


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 263/576 (45%), Gaps = 55/576 (9%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           FK  ES  A P     ++L N     + I  A++V++ + K    +   +  + LI  L 
Sbjct: 86  FKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGY-HPNAITLNTLIKGLC 144

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
              ++ +A      +++Q  +L  ++Y  LI+   +  + +    L+ K+       D +
Sbjct: 145 FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 204

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+ +I SL +   +  +    LY E+    I  +    N ++ GF   G   +A   L 
Sbjct: 205 MYNTIIHSLCKNKLLGDAC--DLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +   ++P   T+  +I AL   G+   A+ V   + ++ +KP    YN+L+ GY  + 
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN 322

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +K+A++V   M +SGV P+  TY+ +ID        + A  + +EM+  +  P+   Y+
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G       +R   + K+MK  G++PD + Y +++D   K   L +A   F R+L +
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK 442

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G   +  T+N +I+   K   +  A +L  +M+ +G  P   T+  +I  L E++  +  
Sbjct: 443 GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502

Query: 530 KRLLGNMRAQGLL-----------------------PNVVTYTTLVDIYGQSGRFDDA-- 564
           +++L  M A+GL                        P+VVTY TL+D Y        A  
Sbjct: 503 EKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKY 562

Query: 565 -------------IEC----LEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                        ++C    ++GL      D+A++ F  M+   + P+ +   SLI+A  
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++     A A+L+ MKE+G++PDV +YT L+  L +
Sbjct: 623 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 228/486 (46%), Gaps = 38/486 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N L++       +  A ++++ + + GYH + I  + +I+ L    +I  +L    + 
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALY--FHD 157

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     +L+      +I G  K G+     R L   +G  + P    Y  +I +L  + 
Sbjct: 158 QVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNK 217

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A  ++ E+   G+ P    YNAL+ G+  MG+LK+A  +++EM+   + PD  T++
Sbjct: 218 LLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFN 277

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LIDA    G+ ++A+IVL  M  +  KP+   Y+ ++ GY    + +    V   M  S
Sbjct: 278 TLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS 337

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV P+   Y  MID   K   +  AM+ F+ M  + + PD +T+ +LID   K    +RA
Sbjct: 338 GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERA 397

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L ++M+E+G  P   +Y I+++ L +  R E+ K     +  +G   NV TY  +++ 
Sbjct: 398 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMING 457

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA-FGEDQRD------ 607
             ++  F +A++    L  +       M   G  P  +   ++I A F +D+ D      
Sbjct: 458 LCKADLFGEAMD----LKSK-------MEGKGCMPDAITFKTIICALFEKDENDKAEKIL 506

Query: 608 ----------------AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLF 651
                            EA  VL  M +  +KPDVVTY TLM     V++     + Y+F
Sbjct: 507 REMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKH--AKYVF 564

Query: 652 FNIYKM 657
           +++ +M
Sbjct: 565 YSMAQM 570



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 192/405 (47%), Gaps = 30/405 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I  L + + + EA  L +  +   + P  +TY +LI    +N  LE+A+ L  KM+
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D  +Y++++ +L +  +++++  ++ ++ +      L+ Q  N +I G  KA  
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENA--KEFFQRLLVKGYHLNVQTYNVMINGLCKADL 463

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL--------- 331
             +AM      +G G  P   T+  +I AL       +AE +  E+   GL         
Sbjct: 464 FGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLK 523

Query: 332 --------------KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
                         KP    Y  L+ GY  +  LK A++V   M + GV P+   Y+++I
Sbjct: 524 EAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMI 583

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D        + A  + +EM+  +  PN   Y+ ++         +R   +LKEMK  G++
Sbjct: 584 DGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQ 643

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD + Y +++D   K   L  A   F R+L +G   +   +  +I+   K G +D A +L
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             +M+++G  P   T++I+I  L E++  +  +++L  M A+GL+
Sbjct: 704 QXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 209/485 (43%), Gaps = 41/485 (8%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI ALG+  K+  A     +  +  + P  +TYN+LI      + ++ A  +   M 
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   +   Y+ +I  L +   +D ++   L++E++   +  D      +I G  K   
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAM--SLFEEMKYKNMIPDIVTYTSLIDGLCKNHH 393

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+      +  G+ P   +Y  ++ AL   GR   A+  F+ L   G     + YN 
Sbjct: 394 LERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNV 453

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY-------------------- 380
           ++ G  K     +A  + S+ME  G +PD  T+  +I A                     
Sbjct: 454 MINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG 513

Query: 381 ---ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              A   R + A+IVL  M  +  KP+   Y  ++ GY    E +    V   M   GV 
Sbjct: 514 LQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVT 573

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y +MID   K   +  AM+ F+ M  + + P+ +T+ +LID   K    +RA  L
Sbjct: 574 PNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIAL 633

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +EM+E G  P   +Y I+++ L +  R E  K +   +  +G   NV  YT +++   +
Sbjct: 634 LKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCK 693

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +G FD+A++    + D+           G  P  +  + +I A  E   + +A  +L  M
Sbjct: 694 AGLFDEALDLQXKMEDK-----------GCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742

Query: 618 KENGL 622
              GL
Sbjct: 743 IARGL 747



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 183/419 (43%), Gaps = 18/419 (4%)

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           +H ++I  SLV       NK   +++  L+K+ E +    D   LN ++  F      + 
Sbjct: 64  FHFNYILSSLV------NNKHYPTVIS-LFKKFESNGATPDLCTLNILMNCFCHLTHITF 116

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A   L      G  P   T   +I  L   G   +A    +++   G +    +Y  L+ 
Sbjct: 117 AFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLIN 176

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K G  K    ++ ++E   V PD   Y+ +I +         A  +  EM V    P
Sbjct: 177 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISP 236

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++ G+   G  +  F +L EMK   + PD   +N +ID  GK   +  A    
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVL 296

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+   I+PD +T+N+LID +F   +   A+ +F  M + G  P   TY  MI+ L ++
Sbjct: 297 AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKE 356

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
           +  ++   L   M+ + ++P++VTYT+L+D   ++   + AI   + + +Q         
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ--------- 407

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             G++P   +   L++A  +  R   A    Q +   G   +V TY  ++  L + D F
Sbjct: 408 --GIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 24/365 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++++L N+       ++F++ + +G  P     N L+  +  + ++  A  V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++ + + G  P+  T + LI      G  + A     ++     + N   Y  ++ G   
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            GE +   ++L++++   V+PD   YN +I +  K   L  A   +  M+ +GI P+ +T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N L+      G    A  L  EM+ +   P   T+N +I+ LG++ + +  K +L  M 
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 538 AQGLLPNVVTYTTLVDIY----------------GQSG------RFDDAIE--CLEGLSD 573
              + P+VVTY +L+D Y                 QSG       +   I+  C E + D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A++ F  M+   + P  +   SLI+   ++     A A+ + MKE G++PDV +YT L+
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420

Query: 634 KALIR 638
            AL +
Sbjct: 421 DALCK 425



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 139/325 (42%), Gaps = 14/325 (4%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P T  +N +L   V   +      +  + E +G  PD  T ++L++ + +      A  V
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L  +      PN+   + ++ G   RGE ++      ++ + G + +   Y  +I+   K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                       ++    ++PD + +NT+I    K      A +L+ EM  +G  P   T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN ++         ++   LL  M+ + + P+V T+ TL+D  G+ G+   A   L    
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLA--- 297

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                   VM    +KP  +  NSLI+ +    +   A  V   M ++G+ P+V TYTT+
Sbjct: 298 --------VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 633 MKALIR---VDKFHKVFSSYLFFNI 654
           +  L +   VD+   +F    + N+
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNM 374



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+A+FDRML     P T  +N ++        Y     LF++ +  G  P   T NI++N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                        +L N+  +G  PN +T  TL+      G    A+       DQ V  
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALY----FHDQVV-- 160

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G + + ++  +LIN   +         +L+ ++ + +KPDVV Y T++ +L +
Sbjct: 161 -----AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK 215



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 42/209 (20%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L + + + EA  L +  +   + P  +TY +LI A  +N  LE+A+ L+ +M+
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D  +Y++++  L ++ +++ +      KEI   ++ + G  LN           
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGA------KEIF-QRLLVKGYHLN----------- 680

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                                 Y A+I  L  +G   EA  +  ++++ G  P    ++ 
Sbjct: 681 -------------------VQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDI 721

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           ++    +      AE ++ EM   G++ +
Sbjct: 722 IIWALFEKDENDKAEKILXEMIARGLMKE 750


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 240/503 (47%), Gaps = 31/503 (6%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQR-----QRLTPLTYNALISACARNDDLEKAL 213
           C +  + ++ L++ L R  ++ +A  L  R      +   +TY  +++   +  D   AL
Sbjct: 6   CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           N++ KM +     + + YS ++  L +  N I +   Q ++ E+    I  +    N +I
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKA---QNIFTEMHEKGIFPNVLTYNCMI 122

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
            G+   G  S A + L       + P   T++A+I A    G+   AE ++ E+    + 
Sbjct: 123 DGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA-----------YA 381
           P T  Y++++ G+ K   L+DA+ +   M   G  PD  T + LID            + 
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    A+ + +EM  +   P+    + +LAG  + G+ ++  ++ K  + S ++ DT 
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N++I+   K N +  A   F+ +   G+E D +T+N LI    K G + RAE+++ EM
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
             +G  P T TYN M++   +Q R E+ ++++ +M ++G  P+VVT++TL+  Y ++GR 
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           DD +E            F  M   GL    +  N+LI+ F +      A  + + M  +G
Sbjct: 423 DDGLE-----------LFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSG 471

Query: 622 LKPDVVTYTTLMKALIRVDKFHK 644
           + PD +T+ +++  L    +  K
Sbjct: 472 VCPDTITFRSMLAGLCTKAELQK 494



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 191/423 (45%), Gaps = 60/423 (14%)

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G   +A+  +      G  P   TY  ++  +   G T+ A  +  ++ ES +K 
Sbjct: 19  GLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKA 78

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y+A++    K G    A+ + +EM   G+ P+  TY+ +ID Y + G+W  A  +L
Sbjct: 79  NVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLL 138

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           ++M   +  P+   +S ++  +   G+     ++ +EM    + P T  Y+ MID F K+
Sbjct: 139 RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH 198

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFK-------C--GRYDRAEELFEEMQ 502
           + L  A   FD M+S+G  PD IT NTLID  C  K       C  G  + A++LF+EM 
Sbjct: 199 SRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMI 258

Query: 503 ERGYFP----CTT-------------------------------TYNIMINLLGEQERWE 527
             G  P    C T                               T NI+IN + +  + +
Sbjct: 259 SNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVD 318

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   L  ++   G+  +VVTY  L+ ++ + G F            +A + +  M   G+
Sbjct: 319 EAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNF-----------LRAEDIYLEMLCKGI 367

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
            PS +  NS+++ F +  R  EA  ++  M   G  PDVVT++TL+K      RVD   +
Sbjct: 368 IPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLE 427

Query: 645 VFS 647
           +FS
Sbjct: 428 LFS 430



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 35/360 (9%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E+G       +  L+ G  + G +  A  +V  M   G  PD  TY  +++     G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             SA  +L++M+ S  K N  IYS I+      G   +   +  EM   G+ P+   YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           MID +  Y     A      M+   I+PD +T++ LI+   K G+   AEEL+ EM  R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD---------IYG 556
            FP T TY+ MI+   +  R ED K +   M ++G  P+++T  TL+D         I+G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 557 --QSGRFD----------------DAIEC---LEGLS-----DQAVNAFRVMRTDGLKPS 590
             Q G  +                D + C   L GL      ++A+  F+V +   +   
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
               N +IN   +  +  EA+ +   +  NG++ DVVTY  L+   ++   F +    YL
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 136/308 (44%), Gaps = 22/308 (7%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  +G   +  T++ L++     GR   A  ++  M     +P++  Y  I+ G    G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L++M  S ++ +   Y+ ++D   K      A   F  M  +GI P+ +T+N 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +ID +   G++  AE+L  +M ER   P   T++ +IN   ++ +    + L   M  + 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + P  +TY++++D + +  R +D           A + F +M + G  P  + LN+LI+ 
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLED-----------AKHMFDLMVSKGCSPDIITLNTLIDG 229

Query: 601 FGEDQRD-AEAFA----------VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
               +R     F           + Q M  NG+ PD+VT  TL+  L    K  K    +
Sbjct: 230 CCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289

Query: 650 LFFNIYKM 657
             F   KM
Sbjct: 290 KVFQKSKM 297



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 2/241 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N L++    N  LEKAL +    ++     D    +++I  + + NK+D +    L+
Sbjct: 267 VTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW--DLF 324

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +  + +E D    N +I  F K G+  +A          G+ P T TY +++      
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQ 384

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  EA  + + +   G  P    ++ L+KGY K G + D   + SEM + G++ D  TY
Sbjct: 385 NRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITY 444

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  +   G    A+ + +EM  S   P++  +  +LAG   + E Q+   +L++++ 
Sbjct: 445 NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504

Query: 434 S 434
           S
Sbjct: 505 S 505


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 216/467 (46%), Gaps = 25/467 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  ++ + +R    E+A+ +  KM + G     + Y++++    +  +  + +L  L  E
Sbjct: 212 YTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKIL-GLLDE 270

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D    + VI    + G   +A  F    +  G +P T TY A++     +G 
Sbjct: 271 MRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGI 330

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA ++ +E++++   P    YN L+  YV+ G+ ++   ++  M  +G+ P+  TY+ 
Sbjct: 331 YSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTT 390

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+AY  A + + A  +  +M+ S   PN   Y+ IL     + + +   ++L +MK  G
Sbjct: 391 MINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDG 450

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P+   +N M+   G      +    F  M S G EPD  T+NTLI    +CG    AE
Sbjct: 451 CAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAE 510

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++++EM E G+ P   TYN ++N L  +  W   + ++ +M+ +G  P+  +Y+ +++ Y
Sbjct: 511 KIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSY 570

Query: 556 GQSGRFDDAIECLEGLSDQAV------------------------NAFRVMRTDGLKPSN 591
            + G         + + D  +                         AF+ ++  G KP  
Sbjct: 571 AKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDL 630

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  NS+++ F        A  ++  ++E GL+PD+VTY +LM    R
Sbjct: 631 VVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYAR 677



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 216/484 (44%), Gaps = 18/484 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G++    EA  + +        P  +TYN L++A  R    E+   L+  M 
Sbjct: 318 YNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMT 377

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   + + Y+ +I +  R  ++D +L   LY +++      +    N ++    K   
Sbjct: 378 ENGIKPNAVTYTTMINAYGRAAQVDKAL--SLYDQMKESGCAPNVCTYNAILGMLGKKSQ 435

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + + M+ L   +  G +P   T+  +++   N G     + VF+E+K  G +P    +N 
Sbjct: 436 SEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNT 495

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G   DAE +  EM  +G  P   TY+ L++A A  G W +A  V+K+M+   
Sbjct: 496 LITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKG 555

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+   YS IL  Y   G  +   ++ K++    + P       +I    K   L    
Sbjct: 556 FKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGME 615

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF  +   G +PD + +N+++    +   +DRA E+   +QE G  P   TYN +++L 
Sbjct: 616 RAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLY 675

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                    + +L  ++  G   ++++Y T++  + + G           L  +A+    
Sbjct: 676 ARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQG-----------LMHEALRTLS 724

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M + G++P  +  N+ +  +      AE   VL YM ++  +P+ +TY  ++    +  
Sbjct: 725 EMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAK 784

Query: 641 KFHK 644
           KF +
Sbjct: 785 KFKE 788



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 190/418 (45%), Gaps = 43/418 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  +I+A  R   ++KAL+L  +M++ G   +   Y+ ++  L +  K  S  + K+ 
Sbjct: 386 VTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGK--KSQSEEMMKIL 443

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +++ D    +    N ++      G      R     +  G  P   T+  +ITA    
Sbjct: 444 CDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRC 503

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  I+AE +++E+ E+G  P    YNALL    + G  + AE V+ +M+  G  P E +Y
Sbjct: 504 GSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSY 563

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPN-SFIYSRILAGYRDRG--EWQRTFQVLKE 430
           SL++++YA  G  +    + K++   H  P+   + + ILA ++ R     +R FQ L++
Sbjct: 564 SLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQK 623

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               G +PD   +N M+  F + N    A      +   G++PD +T+N+L+D + + G 
Sbjct: 624 ---HGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGE 680

Query: 491 YDRAEELFEEMQE-----------------------------------RGYFPCTTTYNI 515
             +AEE+  E+Q                                    RG  PC  TYN 
Sbjct: 681 CWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNT 740

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            +     +  + ++  +L  M      PN +TY  +VD Y ++ +F +A++ +  ++D
Sbjct: 741 FVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD 798



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 16/211 (7%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITWNTLIDCHFKC 488
           + +  V  D     +M    G+ +   H++A+  FD +  +    D   + T++  + +C
Sbjct: 165 LGTGNVNLDNQAVELMARILGRES--QHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRC 222

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGNMRAQGLLPNVVT 547
           G+Y+RA  +FE+M E G  P   TYN+M+++ G+  R W  +  LL  MR++GL  +  T
Sbjct: 223 GKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFT 282

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
            +T++   G+ G  D+A E   GL  Q           G  P  +  N+L+  FG+    
Sbjct: 283 CSTVISACGREGLLDEAKEFFVGLKSQ-----------GYAPGTVTYNALLQVFGKAGIY 331

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +EA ++++ M++N   PD VTY  L+ A +R
Sbjct: 332 SEALSIMKEMEDNNCPPDAVTYNELVAAYVR 362


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/579 (25%), Positives = 263/579 (45%), Gaps = 54/579 (9%)

Query: 107 PSSLNRVEFKLAESYRAVPAPLWHSLLKNL--CSSNSSIDLAYAVVSWLQKHNL---CYS 161
           P +  +V  +L ES R  PA +  + +  +  CS+ + +  A   +    +       ++
Sbjct: 137 PDTFAKVAMRLLES-RDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFT 195

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y  L  I ++ L  +  + + +    R+ L P  L YN++I+A  ++ ++  A ++++K+
Sbjct: 196 YTTLL-IQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D   Y+ +I    R   +DS+   +++  ++ +  E +    + +I G   +G
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAF--EIFNRMDEEGCEPNAATYSTLINGLCNSG 312

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR----- 334
             ++A+ F+      G+ P   T+ A I AL + GR  +A  +F ++K+ G KP      
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT 372

Query: 335 ---------------------------TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                                      T  YNAL+   ++   +  A  V + M + G L
Sbjct: 373 SLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCL 432

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  +Y+ LI  Y   G  E A  +L  M      P    Y+ I+ GY D G+     +V
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L+ MK++G +PD   Y  +I  F K + +  A   F+ M+  G+ P+ +T+  LI  + K
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             + D A  + E M+  G  P   TYN++I+ L +Q  +   + L   M  + + P+VVT
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y+T+++    +G    A+E            F  M   G  P+    +SLI A G++ R 
Sbjct: 613 YSTVINGLCNNGAIPLALE-----------MFNKMVKHGCLPNLHTYSSLIQALGQEGRV 661

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            EA  +   +K+ GL PD VTY  +++  +   K  + F
Sbjct: 662 EEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 204/445 (45%), Gaps = 12/445 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + S++   C  N  +D A+ + + + +   C      YS LI+ L  S ++ EA   +S+
Sbjct: 266 YTSMILGYCR-NRDLDSAFEIFNRMDEEG-CEPNAATYSTLINGLCNSGRVNEALDFISE 323

Query: 188 RQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R   L    T+ A I A      +E A  +   M++ G   +   Y+ +I S  R ++
Sbjct: 324 MTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI-SGQRVSR 382

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +   L  ++ +    D +  +    N ++    +  +   A+    M    G  P T++Y
Sbjct: 383 MAIGLFHRMSR----DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSY 438

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I      G T +A ++   + +    P    YN ++KGY   G    A  V+  M+ 
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G  PDE +Y+ LI  +    + E A  +  EM      PN   Y+ +++GY    +   
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L+ MK SG  P+   YNV+I    K N    A      ML E I PD +T++T+I+
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G    A E+F +M + G  P   TY+ +I  LG++ R E+ + +   ++ QGL+P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECL 568
           + VTY  ++++   SG+ D A + L
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFL 703



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 187/429 (43%), Gaps = 41/429 (9%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA--LGRSEKLYEAF 183
           A  + +L+  LC+S   ++ A   +S + +H +  +     + ++    +GR E  ++ F
Sbjct: 298 AATYSTLINGLCNS-GRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +  +++   P   TY +LIS   R   +  A+ L  +M +DG   + + Y+ ++  L   
Sbjct: 357 IDMKKKGCKPNVYTYTSLISG-QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413

Query: 242 NKIDSSLL-------------QKLYKEI--------ECDKIE------LDGQ------LL 268
            +IDS+L+                Y E+        + +K        L G+        
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTY 473

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G+  +GD   A+R L + +  G  P   +Y  +I+      +   A  +F E+ +
Sbjct: 474 NIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMD 533

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P    Y AL+ GY K   L  A  ++  M+RSG  P+  TY++LI        +  
Sbjct: 534 RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSG 593

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  + K M      P+   YS ++ G  + G      ++  +M   G  P+ H Y+ +I 
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             G+   +  A   F  +  +G+ PD +T+  +I+     G+ DRA +   EM   G  P
Sbjct: 654 ALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713

Query: 509 CTTTYNIMI 517
              TY+++I
Sbjct: 714 TLQTYDVLI 722



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/520 (23%), Positives = 214/520 (41%), Gaps = 32/520 (6%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKL 179
            VP  + ++ L N+   N  ID A  V + + KH  C      Y+ LI     +G +EK 
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG-CLPNTSSYNELIRGYCTIGDTEKA 454

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
                   + R TP  +TYN +I     + D + A+ ++  M+ +G   D  +Y+ +I  
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISG 514

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             + +K++  L   ++ E+    +  +      +I G+ K      A R L   +  G  
Sbjct: 515 FCKISKME--LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I  L+       AE + + + E  + P    Y+ ++ G    G +  A  +
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
            ++M + G LP+ HTYS LI A    GR E A  +  E++     P+   Y +++     
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+  R F  L EM ++G +P    Y+V+I    +   ++H + A     S     D I 
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTSTFDDQII 751

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
              +I              L  ++ E  +      Y+ +++ L    RW +   L  +M 
Sbjct: 752 NKDVISV------------LSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMV 799

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           +Q   PN  TY   +    ++ + D A++  + +SDQ       +   G K        L
Sbjct: 800 SQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCE----LHLTGYK-------EL 848

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           I    +  R  EA  V + M    L  D + +T L+  L+
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLL 888



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN  IY+ ++      G  +    ++ ++  SG++PDT  Y  MI  + +   L  A  
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F+RM  EG EP+  T++TLI+     GR + A +   EM   G  P   T+   I  L 
Sbjct: 285 IFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC 344

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  R ED  ++  +M+ +G  PNV TYT+L  I GQ             +S  A+  F  
Sbjct: 345 DMGRIEDAWKIFIDMKKKGCKPNVYTYTSL--ISGQR------------VSRMAIGLFHR 390

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M  DG+ P+ +  N+L+N   E+     A  V   M ++G  P+  +Y  L++    +  
Sbjct: 391 MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD 450

Query: 642 FHKVFS 647
             K  S
Sbjct: 451 TEKAMS 456



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 173/465 (37%), Gaps = 69/465 (14%)

Query: 117 LAESYRAVPAPL---WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           L    +  P P    ++ ++K  C S  + D+A  V+  L K N C   E  Y+ LI   
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDT-DVAIRVLE-LMKANGCQPDEWSYTELISGF 515

Query: 174 GRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            +  K+  A   F     + L P  +TY ALIS   +++ L+ A  ++ +M++ G   + 
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
             Y+++I  LT+ N    +  ++L K +  +KI  D    + VI G    G    A+   
Sbjct: 576 QTYNVLIHGLTKQNNFSGA--EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL----------------- 331
                 G  P   TY+++I AL   GR  EAE +F ELK+ GL                 
Sbjct: 634 NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMS 693

Query: 332 ------------------KPRTKAYNALLKG------YVKMGYLKDA------------- 354
                             +P  + Y+ L+KG      Y K+  L +A             
Sbjct: 694 GKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINK 753

Query: 355 ---EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
                + S++           Y  L+   + +GRW  A  + + M      PN   Y   
Sbjct: 754 DVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHF 813

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           L       +      V K M     E     Y  +I T  + +    A   F++MLS  +
Sbjct: 814 LISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRAL 873

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             D I W  LI+     G  D   E    M+     P +    I+
Sbjct: 874 NADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPSSHARTIL 918


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 232/478 (48%), Gaps = 18/478 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           ++ +L ++++   A  LSQ+     + P  +T N L++  ++   ++ + ++ +K+ + G
Sbjct: 64  ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           YH D + ++++I+ L    ++  +L    + ++     +LD      +I G  + G+   
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALY--FHDKVVAQGFQLDQVSYGTLINGLCRVGETKA 181

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A++ L    G  + P    Y+ +I ++       +A  ++ E+    + P    Y++L+ 
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLIS 241

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G+  +G LK A  + + M    + P+ +T+S+LID +   G+   A+ VL  M   + K 
Sbjct: 242 GFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ ++ GY    +  +   +   M   GV PD   Y++MI+ F K   +  AM  F
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  + I P+ +T+N+L+D   K GR   A EL +EM +RG      TYN +++ + + 
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
              +    LL  ++ +G+ P++ TYT L++   + GR DDA +  E L            
Sbjct: 422 NHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDL-----------L 470

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             G  P+     SLIN F       E  A+L  MK+NG  P+ +TY  L+ +L   D+
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 203/433 (46%), Gaps = 8/433 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P  +  +LL N  S    I  +++V + + K    +   + ++ILI  L    ++++A  
Sbjct: 91  PDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGY-HPDAVTFTILIKGLCLKGEVHKALY 149

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               +++Q  +L  ++Y  LI+   R  + + A+ L+ ++       + + YS +I S+ 
Sbjct: 150 FHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMC 209

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   ++ +    LY E+   +I  D    + +I GF   G    A+          ++P 
Sbjct: 210 KDKLVNDAF--DLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T++ +I      G+  EA+ V   + +  +K     YN+L+ GY  +  +  A+ + +
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M + GV PD  +YS++I+ +      + A  + +EM      PN   Y+ ++ G    G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 +++ EM   G   +   YN ++D   K N +  A+    ++  +GI+PD  T+ 
Sbjct: 388 RTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYT 447

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI+   K GR D A+++FE++  +GY P   TY  +IN    +  +++   +L  M+  
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDN 507

Query: 540 GLLPNVVTYTTLV 552
           G +PN +TY  L+
Sbjct: 508 GCIPNAITYEILI 520



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 140/294 (47%), Gaps = 14/294 (4%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           + ++  +P    +  ++ +   A ++++A  + ++ME +  KP+    + ++  +   G 
Sbjct: 49  LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            + +F V  ++   G  PD   + ++I        +H A+   D+++++G + D +++ T
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI+   + G    A +L   +  +   P    Y+ +I+ + + +   D   L   M ++ 
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + P+VVTY++L+  +           C+ G    AV+ F  M +D + P+    + LI+ 
Sbjct: 229 ISPDVVTYSSLISGF-----------CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDG 277

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           F ++ +  EA  VL  M +  +K DVVTY +LM     V + +K  S    FN+
Sbjct: 278 FCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS---LFNV 328


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 265/586 (45%), Gaps = 48/586 (8%)

Query: 123 AVPAPLWHSL-LKNLCSSNSSIDLAYAVVSWLQKHN-LCYSYELLYSILIHAL---GRSE 177
            VP  + +S+ LK LC  NS    A  ++  + K    C    + YS +IH     G + 
Sbjct: 224 CVPNAVSYSIVLKALCD-NSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETG 282

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           K    F    RQ + P  +TYN +I A  +   ++KA  ++ +M  DG   D + YS +I
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
                  ++  +   K+++E++   +  +    N  +    K G + +A  F       G
Sbjct: 343 HGYATLGRLKEA--AKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKG 400

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   +Y  ++   ++ G   +   +F  +K +G+      +  L+  Y K G + DA 
Sbjct: 401 HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAM 460

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            + +EM++ GV PD  TYS +I  ++  GR   A     +M     +PN+ +YS I+ G+
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520

Query: 416 RDRGEWQRTFQVLKEMKSSGV-EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
              G   +  +++ EM + G+  PD  F++ +I++  K   +  A   FD     G  P 
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT+N+LID +   G+ D+A ++ + M+  G  P   TYN +++   +  R  D   L  
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEG 570
            M+ +G+ PN VTY  ++    ++GR       F + IE                 C   
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            +D+A+  F+ + T  +K S   LN++INA  + QR  EA  +   +  +GL P+  TY 
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760

Query: 631 TLMKALIR---VDKFHKVFSSY----------LFFNIYKMLSYSGE 663
            ++  L++   V+  + +FSS           L   I +ML   GE
Sbjct: 761 VMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGE 806



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 200/471 (42%), Gaps = 32/471 (6%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TYN L+  C R    +  L L   + + G   D I  + +++ L   N+ + ++   
Sbjct: 156 TFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVL 215

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM--AQGVGLSPKTATYAAVI 307
           L++  E+ C    +   +   V+        + +A+  L M   QG   SP    Y+ VI
Sbjct: 216 LHRMSELGCVPNAVSYSI---VLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI 272

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
               N G T +A ++F E+   G+KP    YN ++    K   +  AE V+ +M   G  
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD  TYS +I  YA  GR + A  + +EM+     PN    +  LA     G  +   + 
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M + G +PD   Y  ++  +    C    +  F+ M S GI  +   +  LI  + K
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G  D A  +F EMQ++G  P   TY+ +I+      R  D       M A+G+ PN   
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 548 YTTLVDIYGQSGRFDDAIE-------------------------CLEGLSDQAVNAFRVM 582
           Y++++  +   G    A E                         C +G    A + F + 
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA 572

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              G +P  +  NSLI+ +    +  +AF +L  M+  G++PD+VTY TL+
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/533 (24%), Positives = 229/533 (42%), Gaps = 58/533 (10%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +IH    LGR ++  + F   +++ L P  +T N+ +++  ++   ++A      M 
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMT 397

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D  +Y  ++            +   L+  ++ + I  +  +   +I  +AK G 
Sbjct: 398 AKGHKPDIFSYCTLLHGYASEGCFADMI--GLFNSMKSNGIAANCHVFTILIHAYAKRGM 455

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AM      Q  G+SP   TY+ VI+  S  GR  +A   F ++   G++P T  Y++
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSS 515

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +++G+   G L  A+ +VSEM   G+  PD   +S +I++    GR   A  +       
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDI 575

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P    ++ ++ GY   G+  + F++L  M+  GVEPD   YN ++D + K   ++  
Sbjct: 576 GERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDG 635

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY------ 513
           +  F  M  +G++P+T+T+  ++   F+ GR   A + F EM E G     + Y      
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 514 -----------------------------NIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                                        N MIN + + +R E+ K L   + A GLLPN
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             TY  ++    + G  +D           A N F  M   G+ P +  LN +I    E 
Sbjct: 756 ESTYGVMIINLLKDGGVED-----------ANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK----VFSSYLFFN 653
              A+A   L  +    +  +  T + ++    R  K+ +    + + Y FFN
Sbjct: 805 GEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQFFN 857



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 27/228 (11%)

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE- 496
           P    YN+++D   +       +A F  +L  G++ D IT NTL+ C     R + A   
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG--LLPNVVTYTTLVDI 554
           L   M E G  P   +Y+I++  L +    +    LL  M  QG    P+VV Y+T++  
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 555 YGQSGRFDDAIECLEGLSDQAVN------------------------AFRVMRTDGLKPS 590
           +   G    A      ++ Q V                           R M TDG +P 
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  + +I+ +    R  EA  + + MK+ GL P++VT  + + +L +
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 19/194 (9%)

Query: 459 AMAAFDRMLSE--GIE---PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           A+A F+R+  E  G +   P   T+N L+DC  +  R D    LF  +   G      T 
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195

Query: 514 NIMINLLGEQERWED-VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           N ++  L    R E+ V  LL  M   G +PN V+Y+ ++              C   +S
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKAL-----------CDNSMS 244

Query: 573 DQAVNAFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            +A++  ++M   G    P  +A +++I+ F  +    +A ++   M   G+KPDVVTY 
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 631 TLMKALIRVDKFHK 644
            ++ AL +     K
Sbjct: 305 LIIDALCKARAMDK 318


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 252/531 (47%), Gaps = 32/531 (6%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ--- 189
           +  LC + S I  A  V   ++KH   +   + Y+ L+  L    ++ +A  L +R    
Sbjct: 57  ISGLCRA-SRIGDAQTVFDGMRKHGF-WPNRITYNALLSGLCNGGRMSDAQALYERMIKA 114

Query: 190 RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
             +P  +TYN L+    +   L++AL +     + G+  D + Y+ +I    + +K+D +
Sbjct: 115 GYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEA 174

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
             Q++ + +  + +  D    N ++ G  K G   +A R L + +G   SP   TY+ +I
Sbjct: 175 --QRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA-RMLIVDKG--FSPNVITYSTLI 229

Query: 308 TALSNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           + L    R +E A  + E++  +G KP   +YNAL+ G  +   + +A  +   + R G 
Sbjct: 230 SGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGY 289

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  TY++LID      R   A  +   +     +P++  Y+  + G    G  +    
Sbjct: 290 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 349

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +LK+M   G  PD   +N +I+   K   +  A      M ++G  P+ I++NTLI    
Sbjct: 350 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 409

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG---EQERWEDVKRLLGNMRAQGLLP 543
           + G++ +A   F+EM +RG  P   TYNI+++ L    ++ R ++   L   M  +G +P
Sbjct: 410 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF-G 602
           +VVTY+ L+D  G++G+ DDA   L             M   G  P+    NSLI+   G
Sbjct: 470 DVVTYSALIDGLGKAGKLDDARRLLGA-----------MEAKGCIPNVYTYNSLISGLCG 518

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            D+ D EA  +   M E G  PD +TY T++ AL +   VDK   +F   L
Sbjct: 519 LDKVD-EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 244/529 (46%), Gaps = 58/529 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLL-- 185
           +++LL  LC+     D A A+   + K    YS +++ Y+ L+H   +  KL EA  +  
Sbjct: 88  YNALLSGLCNGGRMSD-AQALYERMIKAG--YSPDVVTYNTLLHGFCKVGKLDEALKIFD 144

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + ++   P  +TYNALI+   + D L++A  ++ +M  +    D + Y+ ++  L +  
Sbjct: 145 GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNG 204

Query: 243 KID------------------SSLLQKLYKEIECDKIELDGQLL---------------N 269
           ++D                  S+L+  L +E+   ++E   QLL               N
Sbjct: 205 RVDEARMLIVDKGFSPNVITYSTLISGLCRELR--RLESARQLLEKMVLNGCKPDIVSYN 262

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G A+    S+A++  G     G  P+  TY  +I  L    R  EA  +F  L + 
Sbjct: 263 ALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 322

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL+P    Y   + G  K G ++DA  ++ +M+  G +PD  +++ +I+      R + A
Sbjct: 323 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 382

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L  ME     PN+  ++ ++ G    G+W++     KEM   GV+P    YN+++D 
Sbjct: 383 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 442

Query: 450 FGKY---NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
             K      +  A+  FD M+ +G  PD +T++ LID   K G+ D A  L   M+ +G 
Sbjct: 443 LCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGC 502

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN +I+ L   ++ ++   L   M  +G +P+ +TY T++              
Sbjct: 503 IPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL----------- 551

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           C + + D+A+  F      G+ P++    SLI+      R  EA  +LQ
Sbjct: 552 CKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 235/516 (45%), Gaps = 37/516 (7%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQD 222
            IL+ +L +S K+ +A    ++  +  L    T+N  IS   R   +  A  +   MR+ 
Sbjct: 20  GILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKH 79

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G+  + I Y+ ++  L    ++  +  Q LY+ +       D    N ++ GF K G   
Sbjct: 80  GFWPNRITYNALLSGLCNGGRMSDA--QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD 137

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A++    A   G  P   TY A+I     + +  EA+ + + +    L P    YN+L+
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLV 197

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA-GRWESARIVLKEMEVSHA 401
            G  K G + +A  ++ +    G  P+  TYS LI        R ESAR +L++M ++  
Sbjct: 198 NGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGC 254

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+   Y+ ++ G           ++   +   G EP+   YN++ID   K + ++ A  
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  ++  G+EPD IT+   ID   K GR + A  + ++M E+G  P   ++N +IN L 
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------- 568
           +++R ++ + LL  M A+G  PN +++ TL+    ++G++  A+                
Sbjct: 375 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV 434

Query: 569 --------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                         EG   +A+  F  M   G  P  +  ++LI+  G+  +  +A  +L
Sbjct: 435 TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 494

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
             M+  G  P+V TY +L+  L  +DK  +    ++
Sbjct: 495 GAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 212/460 (46%), Gaps = 18/460 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T   L+ +  ++  +EKA   + ++   G  CD   +++ I  L R ++I  +  Q ++ 
Sbjct: 18  TVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDA--QTVFD 74

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +       +    N ++ G    G  S A          G SP   TY  ++      G
Sbjct: 75  GMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVG 134

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +F+   + G  P    YNAL+ G+ K   L +A+ ++  M    ++PD  TY+
Sbjct: 135 KLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEWQRTFQVLKEMKS 433
            L++     GR + AR+++ +   S   PN   YS +++G  R+    +   Q+L++M  
Sbjct: 195 SLVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRRLESARQLLEKMVL 251

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G +PD   YN +I    +   +  A+  F  +L +G EP+  T+N LID   K  R + 
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELF  + + G  P   TY + I+ L +  R ED   +L +M  +G +P+VV++  +++
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              +  R D+A   L G           M   G  P+ ++ N+LI       +  +A   
Sbjct: 372 GLCKEKRVDEAEVLLSG-----------MEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + M + G+KP VVTY  L+  L +  +  ++  +   F+
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 220/484 (45%), Gaps = 73/484 (15%)

Query: 224 YHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA--- 278
           Y  D     ++++SL ++ KI+ +   +++L  +  CD         N  I G  +A   
Sbjct: 12  YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDI-----STFNIYISGLCRASRI 66

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GDA     F GM +  G  P   TY A+++ L N GR  +A+A++E + ++G  P    Y
Sbjct: 67  GDAQTV--FDGMRKH-GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTY 123

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-- 396
           N LL G+ K+G L +A  +     + G +PD  TY+ LI+ +  A + + A+ +L+ M  
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183

Query: 397 ---------------------EVSHAK---------PNSFIYSRILAGY-RDRGEWQRTF 425
                                 V  A+         PN   YS +++G  R+    +   
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESAR 243

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+L++M  +G +PD   YN +I    +   +  A+  F  +L +G EP+  T+N LID  
Sbjct: 244 QLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGL 303

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K  R + A ELF  + + G  P   TY + I+ L +  R ED   +L +M  +G +P+V
Sbjct: 304 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 363

Query: 546 VTYTTLVDIYGQSGRFDDA------------------------IECLEGLSDQAVNAFRV 581
           V++  +++   +  R D+A                         +C  G   +A+  F+ 
Sbjct: 364 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 423

Query: 582 MRTDGLKPSNLALNSLINAFG---EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           M   G+KP+ +  N L++      ++ R  EA  +   M E G  PDVVTY+ L+  L +
Sbjct: 424 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 483

Query: 639 VDKF 642
             K 
Sbjct: 484 AGKL 487



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 147/290 (50%), Gaps = 25/290 (8%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSF-IYSRILAGYRDRGEWQRTF 425
           PD +T  +L+ +   +G+ E A   ++++ V      ++F IY   L      G+ Q  F
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
                M+  G  P+   YN ++        +  A A ++RM+  G  PD +T+NTL+   
Sbjct: 74  D---GMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ D A ++F+   +RG+ P   TYN +IN   + ++ ++ +R+L  M ++ L+P+V
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD-GLKPSNLALNSLINAFGED 604
           VTY +LV+   ++GR D+A               R++  D G  P+ +  ++LI+    +
Sbjct: 191 VTYNSLVNGLCKNGRVDEA---------------RMLIVDKGFSPNVITYSTLISGLCRE 235

Query: 605 QRDAE-AFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            R  E A  +L+ M  NG KPD+V+Y  L+  L R   V +  K+F S L
Sbjct: 236 LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 222/468 (47%), Gaps = 18/468 (3%)

Query: 182 AFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A  LS+R     +TP   T+N LI+      ++  A ++M+K+ + GY  D I ++ +I+
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L    K+  +L    +  +      LD      +I G  K G+   A++ L    G  +
Sbjct: 147 GLCLNGKVKEAL--HFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLV 204

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
                 Y  +I +L      I+A  ++ ++    + P    ++AL+ G+  +G L++A  
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  EM    + PD +T+++L+DA    G  + A+ +L  M      PN   YS ++ GY 
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
              +  +   VL  +   G  P+ H Y  MI+ F K   +  A++ F+ M  +GI PD +
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N+LID   K GR   A EL +EM + G      TYN +I+ L +    +    L+  +
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           + QG+ P++ T+  L  IYG          C  G    A + F+ + + G   +    N 
Sbjct: 445 KDQGIQPDMYTFNIL--IYGL---------CKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           ++N   ++    EA A+L  M +NG+ PD VTY TL++AL   D+  K
Sbjct: 494 MVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEK 541



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 42/427 (9%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ILI+      ++  AF     +L        +T+N LI     N  +++AL+    + 
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+H D  +Y  +I  L +  +  ++L  ++ ++I+   ++++  + N +I    K   
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTAL--QMLRKIDGKLVKINVVMYNTIIDSLCKHKL 223

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A           +SP   T++A+I      G+  EA  +F E+    + P    +N 
Sbjct: 224 VIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNI 283

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K G LK A+ ++  M + GV+P+  TYS L+D Y    +   A+ VL  +    
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK-------- 452
           A PN+  Y  ++ G+           +  +M+  G+ PD   YN +ID   K        
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403

Query: 453 -----------------YNCL-------HH---AMAAFDRMLSEGIEPDTITWNTLIDCH 485
                            YNCL       HH   A+A   ++  +GI+PD  T+N LI   
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGL 463

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR   A+++F+++  +GY     TYNIM+N L ++  +++ + LL  M   G++P+ 
Sbjct: 464 CKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDA 523

Query: 546 VTYTTLV 552
           VTY TL+
Sbjct: 524 VTYETLI 530



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 193/415 (46%), Gaps = 13/415 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           I ++ ++ SL ++N         L + +E   I  D    N +I  +    + + A   +
Sbjct: 67  IEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMM 126

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                +G  P T T+  +I  L  +G+  EA    + +   G      +Y  L+ G  K+
Sbjct: 127 AKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKI 186

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  + A  ++ +++   V  +   Y+ +ID+         A  +  +M      P+   +
Sbjct: 187 GETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTF 246

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S ++ G+   G+ +  F + +EM    + PD + +N+++D   K   L  A      M+ 
Sbjct: 247 SALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMK 306

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           EG+ P+ +T+++L+D +    + ++A+ +   + + G  P   +Y  MIN   + +  ++
Sbjct: 307 EGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDE 366

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L  +M+ +G+ P+ VTY +L+D   +SGR   A E ++ + D              +
Sbjct: 367 ALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG------------Q 414

Query: 589 PSNL-ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           P+N+   N LI+A  ++    +A A+++ +K+ G++PD+ T+  L+  L +V + 
Sbjct: 415 PANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRL 469



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 166/353 (47%), Gaps = 2/353 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           ++  + YN +I +  ++  +  A  L S+M       D + +S +I       +++ +  
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF- 263

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L++E+    I  D    N ++    K G+   A   L +    G+ P   TY++++  
Sbjct: 264 -GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
                +  +A+ V   + + G  P   +Y  ++ G+ K+  + +A  + ++M+  G+ PD
Sbjct: 323 YCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPD 382

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           + TY+ LID    +GR   A  ++ EM  +    N F Y+ ++          +   ++K
Sbjct: 383 KVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVK 442

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++K  G++PD + +N++I    K   L +A   F  +LS+G   +  T+N +++   K G
Sbjct: 443 KIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEG 502

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            +D AE L  +M + G  P   TY  +I  L  ++  E  ++LL  M A+ ++
Sbjct: 503 LFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 201/441 (45%), Gaps = 23/441 (5%)

Query: 129 WHSLLKNLCS---SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-L 184
           + +L+  LC    + +++ +   +   L K N+     ++Y+ +I +L + + + +A+ L
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINV-----VMYNTIIDSLCKHKLVIDAYEL 230

Query: 185 LSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            SQ   ++++P  +T++ALI        LE+A  L  +M     + D+  +++++ +L +
Sbjct: 231 YSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCK 290

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
              +  +  +L  + KE     +     L++    G+      +KA   L     +G +P
Sbjct: 291 EGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD----GYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              +Y  +I          EA ++F +++  G+ P    YN+L+ G  K G +  A  +V
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM  +G   +  TY+ LIDA       + A  ++K+++    +P+ + ++ ++ G    
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  +    V +++ S G   +   YN+M++   K      A A   +M   GI PD +T+
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR----LLG 534
            TLI   F     ++AE+L  EM  R          ++++L  E +  E   +     + 
Sbjct: 527 ETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHLESEAKDQEKFGKKGYYAIT 586

Query: 535 NMRAQGLLPNVVTYTTLVDIY 555
               QGL+  VV  +  +D++
Sbjct: 587 TNLGQGLISAVVQLSLCIDLF 607



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 13/209 (6%)

Query: 443 YNVMIDTFGKYNCLHH--AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           +N ++ +  K N  H+  A++   R+   GI PD  T+N LI+C+      + A  +  +
Sbjct: 69  FNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAK 128

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           + + GY P T T+N +I  L    + ++      ++ A G   +  +Y TL++   + G 
Sbjct: 129 ILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGE 188

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
              A++ L  +  + V    VM            N++I++  + +   +A+ +   M   
Sbjct: 189 TRTALQMLRKIDGKLVKINVVMY-----------NTIIDSLCKHKLVIDAYELYSQMIAK 237

Query: 621 GLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            + PDVVT++ L+     V +  + F  +
Sbjct: 238 KISPDVVTFSALIYGFCIVGQLEEAFGLF 266


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 240/523 (45%), Gaps = 61/523 (11%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+ L+  L    +  EA 
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPDVFSYNNLLKGLCDENRSQEAL 183

Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            L       R   +P   ++YN +++   +  D +KA +   +M   G   D + YS +I
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  D    N ++ G+  +G   +A+  L   + 
Sbjct: 244 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 299

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY++++  L  +GR+ EA  +F+ + + GL+P    Y  LL+GY   G L +
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE 359

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD H +++LI AYA   + + A +                      
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML---------------------- 397

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                        V  +M+  G+ P+   Y  +ID   K   +  AM  F++M+ EG+ P
Sbjct: 398 -------------VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + I + +LI     C ++D+AEEL  EM +RG    T  +N +I+   ++ R  + ++L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M   G+ P+++TY TL+D             CL G  D+A      M + G+KP  + 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGC-----------CLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +LIN +    R  +A A+ + M  +G+ P+++TY  +++ L
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/533 (23%), Positives = 233/533 (43%), Gaps = 29/533 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLL 185
           + S++  LC + + +D A  V++ + K+ +   C +Y    SIL H    S +  EA   
Sbjct: 239 YSSIIAALCKAQA-MDKAMEVLNTMVKNGVMPDCMTYN---SIL-HGYCSSGQPKEAIGT 293

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS-LT 239
            ++ R   + P  +TY++L++   +N    +A  +   M + G   D   Y  ++Q   T
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   ++   L  L      + I+ D  + N +I  +AK     +AM      +  GL+P 
Sbjct: 354 KGALVEMHALLDLMVR---NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
              Y  VI  L  SG   +A   FE++ + GL P    Y +L+ G         AE ++ 
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G+  +   ++ +ID++   GR   +  +   M     KP+   Y+ ++ G    G
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     ++L  M S GV+PD   Y  +I+ + + + +  A+A F  M+S G+ P+ IT+N
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            ++   F   R   A+EL+  + + G     +TYNI+++ L +    ++  R+  N+   
Sbjct: 591 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 650

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            L     T+  ++    + GR            D+A + F     +GL P     + +  
Sbjct: 651 DLQLETRTFNIMIGALLKCGRM-----------DEAKDLFAAHSANGLVPDVRTYSLMAE 699

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              E     E   +   M+ENG   D     ++++ L++     +   +YLF 
Sbjct: 700 NLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA-GTYLFM 751



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 12/192 (6%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P   T+  LI C  + GR D        + ++G+     T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +P+V +Y  L+       R  +A+E L  ++D 
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   R  G  P  ++ N+++N F ++    +A++    M + G+ PDVVTY++++ 
Sbjct: 193 --------RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244

Query: 635 ALIRVDKFHKVF 646
           AL +     K  
Sbjct: 245 ALCKAQAMDKAM 256



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 7/242 (2%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI     + K+ EA      ++S   +   +TY  LI+   R   ++ AL L  +
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   + I Y++++Q L  T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAA--KELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F     +GL P  + Y
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + + +  ++ G L++ + +   ME +G   D    + ++      G    A   L  ++ 
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 399 SH 400
            H
Sbjct: 755 KH 756



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + +T+T L+       R  DA++ 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M   G  P   + N+L+    ++ R  EA  +L  M ++   G  P
Sbjct: 150 V----------LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+Y T++    +     K +S+Y
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTY 224



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/239 (20%), Positives = 104/239 (43%), Gaps = 22/239 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+   R  ++ +A  L +      ++P  +TYN ++           A  L   + 
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y++++  L + N  D +L  ++++ +    ++L+ +  N +I    K G 
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEAL--RMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY+ +   L   G   E + +F  ++E+G    ++  N+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGV---LPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +++  ++ G          ++ R+G    + DE  +SL  +A   +   ES+ IV +++
Sbjct: 732 IVRKLLQRG----------DITRAGTYLFMIDEKHFSL--EASTASFLLESSPIVWEQI 778


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 281/629 (44%), Gaps = 44/629 (6%)

Query: 23  TRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQRY 82
           T   + F+PAFS  T   I   + S +S    + F   Q             L      +
Sbjct: 190 TMRKLKFRPAFSAYT-NLIGALSTSRDSDCMLTLFQQMQE------------LGYAVNVH 236

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
            FT L+   +     ++A +L     S N +E          P  + +++  +       
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKS-NSLE----------PDVVLYNVCIDCFGKAGK 285

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYN 197
           +D+A+     ++ + L    ++ Y+ +I  L ++++L EA  L       +Q      YN
Sbjct: 286 VDMAWKFFHEMKANGLVLD-DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYN 344

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            +I         E A +L+ + R+ G     ++Y+ ++  L R  ++D +L  K ++E++
Sbjct: 345 TMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL--KKFEEMK 402

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
            D I  +    N +I    KAG    A+      +  GL P   T   ++  L  + R  
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A ++FE L     +P    Y +L++G  + G + +A  +  +M  +  +P+   Y+ LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             +   GR E    +  EM      P+  + +  +      GE ++   + +E+K+ G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y ++I    K    H A   F  M  +G   DT  +NT+ID   K G+ ++A +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            EEM+ +G+ P   TY  +I+ L + +R ++   L    +++G+  NVV Y++L+D +G+
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR D+A   +E L  +           GL P+    N L++A  + +  +EA    Q M
Sbjct: 702 VGRIDEAYLIMEELMQK-----------GLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           K+    P+ +TY+ L+  L ++ KF+K F
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAF 779



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 226/507 (44%), Gaps = 46/507 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + K  +A+ L +RQR      + ++YN ++S   R   +++AL    +M+
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    +   Y+++I  L +  K++++L+ +       D ++ D  L  +VI        
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVR-------DAMK-DAGLFPNVITVNIMVDR 453

Query: 281 ASKAMR-------FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
             KA R       F G+       P   TY ++I  L   GR  EA  ++E++ ++   P
Sbjct: 454 LCKAQRLDDACSIFEGLDHKT-CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP 512

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y +L++ + K G  +D   + +EM R G  PD    +  +D    AG  E  R + 
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +E++     P++  Y+ ++ G    G     +++   MK  G   DT  YN +ID F K 
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKS 632

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             ++ A    + M ++G EP  +T+ ++ID   K  R D A  LFEE + +G       Y
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           + +I+  G+  R ++   ++  +  +GL PNV T+  L+D   ++    +A+ C + + D
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752

Query: 574 ------------------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                                   +A   ++ M+  G KP+     ++I+   +     E
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE 812

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKAL 636
           A  + +  KE G   D   Y  +++ L
Sbjct: 813 ADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 212/477 (44%), Gaps = 20/477 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L ++ KL  A ++    +   L P  +T N ++    +   L+ A ++   + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAG 279
                 D + Y  +I+ L R  ++D +   KLY++ ++ ++I  +  +   +I  F K G
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAY--KLYEQMLDANQIP-NAVVYTSLIRNFFKCG 528

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                 +       +G SP        +  +  +G   +  A+F+E+K  G  P  ++Y 
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G VK G+  +A  +   M+  G + D   Y+ +ID +  +G+   A  +L+EM+  
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P    Y  ++ G          + + +E KS G+E +   Y+ +ID FGK   +  A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + ++ +G+ P+  TWN L+D   K      A   F+ M++    P   TY+I+I+ 
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +  ++         M+ QG  PNV TYTT++    ++G   +A    E   ++     
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG---- 824

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                 G+  S +  N++I       R ++A+ + +  +  G      T   L+ +L
Sbjct: 825 ------GVADSAI-YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 199/450 (44%), Gaps = 16/450 (3%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           ++  L +A   +  MR+  +   F  Y+ +I +L+ +   DS  +  L+++++     ++
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR--DSDCMLTLFQQMQELGYAVN 234

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             L   +I  FA+ G    A+  L   +   L P    Y   I     +G+   A   F 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFH 294

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+K +GL      Y +++    K   L +A  +   M+++  +P  + Y+ +I  Y  AG
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           ++E A  +L+        P+   Y+ IL+    +G+     +  +EMK   + P+   YN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           +MID   K   L  A+   D M   G+ P+ IT N ++D   K  R D A  +FE +  +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  +I  LG   R ++  +L   M     +PN V YT+L+  + + GR +D 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
            +            +  M   G  P  L LN+ ++   +     +  A+ Q +K  G  P
Sbjct: 534 HK-----------IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           D  +YT L+  L++    H+ +   LF+ +
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYE--LFYTM 610



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 211/474 (44%), Gaps = 24/474 (5%)

Query: 186 SQRQRLTPLTYNA----LISACARNDDLEKALNLM--SKMRQDGYHCDFINYSLVIQSLT 239
           S   RL  L  N     +I    R  D+  A+N    ++   D  HC    Y+ ++  + 
Sbjct: 83  SVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREA-YNSLLMVMA 141

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           RT K +   L+++ +E+             ++++ F K+    +A  F+   + +   P 
Sbjct: 142 RTRKFNC--LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPA 199

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            + Y  +I ALS S  +     +F++++E G       +  L++ + + G +  A  ++ 
Sbjct: 200 FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD 259

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM+ + + PD   Y++ ID +  AG+ + A     EM+ +    +   Y+ ++       
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKAD 319

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 ++ + M  +   P  + YN MI  +G       A +  +R   +G  P  +++N
Sbjct: 320 RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            ++ C  + G+ D A + FEEM++    P  +TYNIMI++L +  + E    +   M+  
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDA 438

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL PNV+T   +VD   ++ R DDA    EGL  +             +P  +   SLI 
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-----------RPDAVTYCSLIE 487

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             G   R  EA+ + + M +    P+ V YT+L++      R +  HK+++  L
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I  L + ++L EA++L     S+   L  + Y++LI    +   +++A  +M ++ 
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           Q G   +   ++ ++ +L +  +I  +L+  +  K+++C    +   +L   I G  K  
Sbjct: 717 QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL---IHGLCKIR 773

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA  F    Q  G  P   TY  +I+ L+ +G  +EA+ +FE+ KE G    +  YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           A+++G        DA  +  E    G      T  +L+D+   A   E A IV
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIV 886



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEAFLL-- 185
           W+ LL  L  +    +++ A+V +    +L C    + YSILIH L +  K  +AF+   
Sbjct: 727 WNCLLDALVKAE---EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             Q+Q   P   TY  +IS  A+  ++ +A  L  K ++ G   D   Y+ +I+ L+  N
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 243 K 243
           +
Sbjct: 844 R 844


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 31/499 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
           +S L  A+ ++++      L ++  L  + +N      +I+   R   L  A + M K+ 
Sbjct: 91  FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  + I +S +I  L    ++ S  L+ + + +E    + D   +N ++ G   +G 
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRV-SEALELVDRMVEMGH-KPDLITINTLVNGLCLSGK 208

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++AM  +      G  P   TY  V+  +  SG+T  A  +  +++E  +K     Y+ 
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G L +A  + +EME  G+  +  TY++LI  + NAGRW+    +L++M    
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   +S ++  +   G+ +   ++ KEM   G+ PDT  Y  +ID F K N L  A 
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D M+S+G +P+  T+N LI+ + K  R D   ELF +M  RG    T TYN +I   
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
            E  +    K L   M ++ + PN+VTY  L+D    +G  + A+E  E +         
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508

Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                           D A + F  +   G+KP     N +I    +    +EA  + + 
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568

Query: 617 MKENGLKPDVVTYTTLMKA 635
           M+E+G  PD  TY  L++A
Sbjct: 569 MEEDGHAPDGWTYNILIRA 587



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 187/408 (45%), Gaps = 13/408 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           I++S +  ++ +T + D  L+  L K++E   I  +   L+ +I  F +      A   +
Sbjct: 89  IDFSRLFSAIAKTKQYD--LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G    +G  P T T++ +I  L   GR  EA  + + + E G KP     N L+ G    
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G   +A  ++ +M   G  P+  TY  +++    +G+   A  +L++ME  + K ++  Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S I+ G    G     F +  EM+  G+  +   YN++I  F               M+ 
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
             I P+ +T++ LID   K G+   AEEL +EM  RG  P T TY  +I+   ++   + 
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             +++  M ++G  PN+ T+  L++ Y ++ R DD +E            FR M   G+ 
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE-----------LFRKMSLRGVV 435

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +  N+LI  F E  +   A  + Q M    + P++VTY  L+  L
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 204/451 (45%), Gaps = 15/451 (3%)

Query: 129 WHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           + +L+  LC     + +++L   +V    K +L     +  + L++ L  S K  EA LL
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDL-----ITINTLVNGLCLSGKEAEAMLL 215

Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             +      +   +TY  +++   ++     A+ L+ KM +     D + YS++I  L +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              +D++    L+ E+E   I  +    N +I GF  AG      + L       ++P  
Sbjct: 276 HGSLDNAF--NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T++ +I +    G+  EAE + +E+   G+ P T  Y +L+ G+ K  +L  A  +V  
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G  P+  T+++LI+ Y  A R +    + ++M +     ++  Y+ ++ G+ + G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +EM S  V P+   Y +++D          A+  F+++    +E D   +N 
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I       + D A +LF  +  +G  P   TYNIMI  L ++    + + L   M   G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
             P+  TY  L+  +   G    +++ +E L
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 8/407 (1%)

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           Y   P  + +  + N+   +    LA  ++  +++ N+     + YSI+I  L +   L 
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD-AVKYSIIIDGLCKHGSLD 280

Query: 181 EAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            AF L     +  +T     YN LI         +    L+  M +   + + + +S++I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
            S  +  K+  +  ++L+KE+    I  D      +I GF K     KA + + +    G
Sbjct: 341 DSFVKEGKLREA--EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   T+  +I     + R  +   +F ++   G+   T  YN L++G+ ++G L  A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +  EM    V P+  TY +L+D   + G  E A  + +++E S  + +  IY+ I+ G 
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
            +  +    + +   +   GV+P    YN+MI    K   L  A   F +M  +G  PD 
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            T+N LI  H   G   ++ +L EE++  G+    +T  ++I++L +
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 26/371 (7%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    ++ + +A++ + +     A+ ++++  G+       + ++  + +   L  A   
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + ++ + G  P+  T+S LI+     GR  E+  +V + +E+ H KP+    + ++ G  
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLC 204

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+      ++ +M   G +P+   Y  +++   K      AM    +M    I+ D +
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            ++ +ID   K G  D A  LF EM+ +G      TYNI+I       RW+D  +LL +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLS 572
             + + PNVVT++ L+D + + G+  +A E                        C E   
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+A     +M + G  P+    N LIN + +  R  +   + + M   G+  D VTY TL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444

Query: 633 MKALIRVDKFH 643
           ++    + K +
Sbjct: 445 IQGFCELGKLN 455



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 135/288 (46%), Gaps = 11/288 (3%)

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  +ME  G+  + +T S++I+ +    +   A   + ++     +PN+  +S ++ G  
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G      +++  M   G +PD    N +++          AM   D+M+  G +P+ +
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+  +++   K G+   A EL  +M+ER        Y+I+I+ L +    ++   L   M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +G+  N++TY  L+  +  +GR+DD  + L  +  + +N           P+ +  + 
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-----------PNVVTFSV 338

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           LI++F ++ +  EA  + + M   G+ PD +TYT+L+    + +   K
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 29/299 (9%)

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E   S L+D  A     + A  + ++M  S   P    +SR+ +      ++     + K
Sbjct: 58  ERLRSGLVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M+  G+  + +  ++MI+ F +   L  A +A  +++  G EP+TIT++TLI+     G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A EL + M E G+ P   T N ++N L    +  +   L+  M   G  PN VTY 
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
            ++++  +SG+   A+E                        C  G  D A N F  M   
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           G+  + +  N LI  F    R  +   +L+ M +  + P+VVT++ L+ + ++  K  +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 251/542 (46%), Gaps = 19/542 (3%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILI 170
           R  F L  +  A P     + +   C +   +D+A A++  + +       +   Y+++I
Sbjct: 142 RAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVI 201

Query: 171 HALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
             L RS K  +A      ++        +TYN +I    +  DLE    L  +M  DG  
Sbjct: 202 AGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK 261

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            + + Y++++  L RT ++D +  + L  E+    +  DG   + +  G  + G++   +
Sbjct: 262 PNVVTYNVLLSGLCRTGRMDET--RALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                +   G+     T + ++  L   G+  +A+ VFE L  +GL P T  YN L+ GY
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGY 379

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            ++  L+ A  +  +M+   + PD  TY+ LI+          A  ++ EME S   P+ 
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             ++ ++  Y   G+ ++ F VL +M+  G++ D   +  ++  F K   +  A+A  D 
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+ + + P+   +N++ID + + G  ++A  L E+M+  G      TYN+++  L    +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            ++ + L+  +R QGL P+VV+Y T++      G  D A+E L     Q +N +      
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL-----QEMNKY------ 608

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G++P+    ++L++A     R  +   + Q M    ++P    Y  ++ A +R +   KV
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668

Query: 646 FS 647
            S
Sbjct: 669 AS 670



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 233/514 (45%), Gaps = 32/514 (6%)

Query: 164 LLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM-R 220
           LL S+L   +GR   +  AF  L++   R     +N ++ AC    DL+ AL ++ +M R
Sbjct: 128 LLESLLF--VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 221 QDGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +G    D  +Y++VI  L R+ K   +L  K++ E+    +  +    N +I G  K G
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDAL--KVFDEMVDMGVAPNRITYNTMIDGHVKGG 243

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D     R        G  P   TY  +++ L  +GR  E  A+ +E+    + P    Y+
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYS 303

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L  G  + G  +    + +E  + GV+   +T S+L++     G+   A+ V + +  +
Sbjct: 304 ILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHT 363

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P + IY+ ++ GY    + +  F + ++MKS  + PD   YN +I+   K   +  A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M   G++P   T+NTLID +   G+ ++   +  +MQ++G      ++  ++  
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  +  +   +L +M  + + PN   Y +++D Y +SG  + A+  +E + +  V+A 
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSAS 543

Query: 580 RV------------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            V                        +R  GL+P  ++ N++I+A        +A  +LQ
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M + G++P + T  TL+ AL    + H +   Y
Sbjct: 604 EMNKYGIRPTLRTCHTLVSALASAGRVHDMECLY 637



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 159/344 (46%), Gaps = 7/344 (2%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQ 221
           SIL++ L   G+  K  + F +     L P T  YN LI+   +  DL  A  +  +M+ 
Sbjct: 338 SILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D I Y+ +I  L +   +  +  + L  E+E   ++   +  N +I  +  AG  
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKA--EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K    L   Q  G+     ++ +V+ A   +G+  EA A+ +++    + P  + YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y++ G  + A  +V +M+ SGV     TY+LL+     + + + A  ++  +     
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P+   Y+ I++   ++G+  +  ++L+EM   G+ P     + ++        +H    
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            + +ML + +EP +  +  ++D + +C    +   L +EM E+G
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 144/304 (47%), Gaps = 26/304 (8%)

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           LP   + +LL+++    GR    R     +  + A+P++F +++++      G+      
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 427 VLKEM-KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           +L+ M +S G  P   F YNV+I    +      A+  FD M+  G+ P+ IT+NT+ID 
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           H K G  +    L ++M   G  P   TYN++++ L    R ++ + L+  M +  +LP+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 545 VVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEGLSDQAVNAFR 580
             TY+ L D   ++G        F ++++                 C +G   +A   F 
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           ++   GL P+ +  N+LIN + + +    AF + + MK   ++PD +TY  L+  L +++
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 641 KFHK 644
              K
Sbjct: 419 MVTK 422



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/418 (20%), Positives = 185/418 (44%), Gaps = 9/418 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLL 185
           ++ LL  LC +   +D   A++  +  H++    ++Y +L+  L    G S+ +   F  
Sbjct: 267 YNVLLSGLCRTGR-MDETRALMDEMASHSMLPDGFTYSILFDGLTRT-GESQTMLSLFAE 324

Query: 186 SQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           S ++   L   T + L++   ++  + KA  +   +   G     + Y+ +I    +   
Sbjct: 325 SLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRD 384

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +    ++++++   I  D    N +I G  K    +KA   +   +  G+ P   T+
Sbjct: 385 LRGAFC--IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I A   +G+  +   V  ++++ G+K    ++ +++K + K G + +A  ++ +M  
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             V P+   Y+ +IDAY  +G  E A +++++M+ S    +   Y+ +L G     +   
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +++  +++ G+ PD   YN +I           A+     M   GI P   T +TL+ 
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVS 622

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
                GR    E L+++M  +   P ++ Y IM++     E    V  L   M  +G+
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 13/284 (4%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           + Y+ LI+ L + E + +A    +  ++  + P   T+N LI A      LEK   ++S 
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           M+Q G   D I++  V+++  +  KI  +   L   +YK++       + Q+ N +I  +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA-----PNAQVYNSIIDAY 519

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++GD  +A+  +   +  G+S    TY  ++  L  S +  EAE +   L+  GL+P  
Sbjct: 520 IESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            +YN ++      G    A  ++ EM + G+ P   T   L+ A A+AGR      + ++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQ 639

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           M   + +P+S IY  ++  Y       +   + KEM   G+  D
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN++I A   + D E+AL L+ KM+  G     + Y+L+++ L R+++ID +  ++L  
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA--EELIY 568

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    +  D    N +I      GD  KA+  L      G+ P   T   +++AL+++G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           R  + E +++++    ++P +  Y  ++  YV+         +  EM   G+  D+
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 229/493 (46%), Gaps = 32/493 (6%)

Query: 166 YSILIHALGRSEKLYEAFL-LSQRQRLTPLTYNA-----LISACARNDDLEKALNLMSKM 219
           ++ L+ A+ +  + Y+  + L+++  L  L+ N      LI+  +    ++ A ++++K+
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G     + ++ +I  L +  K   ++  +L+ ++       D      +I G  K G
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAM--ELFDDMVARGCRPDVYTYTTIINGLCKIG 217

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + + A   L   +  G  P   TY+ +I +     R  EA  +F  +K  G+ P    YN
Sbjct: 218 ETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYN 277

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G       K+A  +++EM    ++PD  T+++L+D     G+   A+ VLK M   
Sbjct: 278 SLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM 337

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+   YS ++ GY  R E     ++   M + G +PD   YN++I+ + K   +  A
Sbjct: 338 GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+ M+ +G+ P+ +++NTLI    + G    A  LF+ M   G  P   TY+I+++ 
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDG 457

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
             +Q  +    RL   M++    PN+V Y  L+D   +SG   DA +             
Sbjct: 458 FCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPN 517

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EGL D+A+ AFR M  DG  P  ++ N +I  F   + ++ A  ++ 
Sbjct: 518 AQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIG 577

Query: 616 YMKENGLKPDVVT 628
            M++ G   DV T
Sbjct: 578 EMRDKGFIADVGT 590



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 207/448 (46%), Gaps = 18/448 (4%)

Query: 194 LTYNALISACARNDDL-EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQ 250
           + +  L+SA  +     +  ++L  +M   G   +    S++I   +   ++D   S+L 
Sbjct: 98  IQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLA 157

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K+ K      I     L+N       K G  ++AM         G  P   TY  +I  L
Sbjct: 158 KIIKLGLQPTIVTFTTLIN----WLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGL 213

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G T  A  + ++++E+G +P    Y+ ++  + K   + +A  + S M+  G+ PD 
Sbjct: 214 CKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI    N  +W+ A  +L EM   +  P+   ++ ++      G+      VLK 
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKT 333

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   GVEPD   Y+ ++  +   + +  A   FD M+++G +PD  ++N LI+ + K  R
Sbjct: 334 MTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKR 393

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A++LF EM  +G  P   +YN +I+ L +     + + L  NM   G LPN+ TY+ 
Sbjct: 394 IDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSI 453

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D +           C +G   +A   FR M++   KP+ +  N LI+A  +     +A
Sbjct: 454 LLDGF-----------CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDA 502

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +   +   GL+P+   YTT++  L +
Sbjct: 503 RKLFSELFVKGLQPNAQIYTTIINGLCK 530



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 11/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLSP   T + +I   S+  R   A +V  ++ + GL+P    +  L+    K+G    A
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  +M   G  PD +TY+ +I+     G   +A  +LK+ME +  +PN   YS I+  
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +R          +   MK  G+ PD   YN +I     ++    A A  + M S  I PD
Sbjct: 248 HRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPD 307

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+N L+D   K G+   A+ + + M E G  P   TY+ ++     +    + ++L  
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD 367

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  P+V +Y  L++ Y +  R D+A +            F  M   GL P+N++ 
Sbjct: 368 AMITKGCKPDVFSYNILINGYCKVKRIDEAKQ-----------LFNEMIHQGLTPNNVSY 416

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N+LI+   +     EA  + + M  NG  P++ TY+ L+    +   F K F
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 123/245 (50%), Gaps = 14/245 (5%)

Query: 400 HAKPNSFI--YSRILAGYRDRGEWQRT-FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           H KP   I  ++++L+     G++  T   + K+M+ +G+ P+ +  +++I+ F     +
Sbjct: 90  HRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRV 149

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A +   +++  G++P  +T+ TLI+   K G++ +A ELF++M  RG  P   TY  +
Sbjct: 150 DLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTI 209

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN L +         LL  M   G  PNVVTY+T++D + +  R ++A++          
Sbjct: 210 INGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALD---------- 259

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  M+  G+ P     NSLI       +  EA A+L  M+   + PD+VT+  L+  +
Sbjct: 260 -IFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318

Query: 637 IRVDK 641
            +  K
Sbjct: 319 CKEGK 323



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 25/203 (12%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY-DRAEELFEEMQERGYFPCTTTYNIMI 517
           A+A+F+ ML     P  I +  L+    K G+Y D    L ++M+  G  P   T +I+I
Sbjct: 81  ALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILI 140

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------- 566
           N     +R +    +L  +   GL P +VT+TTL++   + G+F  A+E           
Sbjct: 141 NCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR 200

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C  G +  A    + M   G +P+ +  +++I++  +D+R  EA  +
Sbjct: 201 PDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDI 260

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
             YMK  G+ PD+ TY +L++ L
Sbjct: 261 FSYMKVKGISPDIFTYNSLIQGL 283



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           LP ++ +T L+    + G++ D +          ++  + M   GL P+   L+ LIN F
Sbjct: 94  LPCIIQFTKLLSAIVKMGQYYDTV----------ISLTKQMELAGLSPNIYTLSILINCF 143

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              QR   AF+VL  + + GL+P +VT+TTL+  L +V KF
Sbjct: 144 SHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF 184


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 258/544 (47%), Gaps = 39/544 (7%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ- 189
           + LK LC +  + D A  V+        C    + Y+ +I +L    +  EA  + QR  
Sbjct: 164 TFLKCLCHAKRT-DEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222

Query: 190 ----RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
               R +P  +++N +I    +  ++ KA NL ++M Q G   D   Y+ ++ +L +   
Sbjct: 223 KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARA 282

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  + + +++    +E DG   N +I G++ +G   ++ +        GL P T T+
Sbjct: 283 MDKA--EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTF 340

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           ++ +++L   GR+ +AE +F+ +   G  P   +Y+ LL GY   G   D   +   M  
Sbjct: 341 SSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMAD 400

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++ + H  ++LI A+A  G  + A +V  EM+    +PN   YS +++ +   G    
Sbjct: 401 KGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLAD 460

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE-PDTITWNTLI 482
             +   +M S G+EP+T  Y+ +I  F  +  L  A      M+S+G+  P+ + ++++I
Sbjct: 461 AMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520

Query: 483 DCHFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMR 537
             H  C  GR   A+++F  +   G  P   T+N +I+   L+G+ E+   V   L  M 
Sbjct: 521 --HSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV---LDAMV 575

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           + G+ P+VVT  TLV  Y +SG+ DD +             FR M    +KP+ +  N +
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSGKIDDGLI-----------LFREMLHKKVKPTTVTYNIV 624

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD-------KFHKVFSSYL 650
           ++      R + A  +   M ++G   D+ TY  L+K L R D        FHK+ +   
Sbjct: 625 LDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDC 684

Query: 651 FFNI 654
            F+I
Sbjct: 685 KFDI 688



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 202/474 (42%), Gaps = 54/474 (11%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +IH    S    E+   F     + L P  +T+++ +S+  ++   + A  +   M 
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D ++YS+++       +     +  L+  +    I  +   +N +I   AK G 
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFAD--MNNLFHSMADKGIVSNCHCINILISAHAKRGM 422

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM      QG G+ P   TY+ +I+A    GR  +A   F ++   G++P T  Y++
Sbjct: 423 MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHS 482

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           L+ G+   G L  A+  +SEM   G+  P+   +S +I +    GR   A+ V   +   
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHI 542

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P    ++ ++ GY   G+ ++ F VL  M S G+EPD    N ++  + K   +   
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM------------------ 501
           +  F  ML + ++P T+T+N ++D   + GR   A+++F EM                  
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662

Query: 502 --------------QERGYFPC---TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                          + G   C    T  N MIN L +  R E+   L   +   GL+PN
Sbjct: 663 LCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPN 722

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           V TY  ++    +           EG  ++A   F  M   G  PS+  LN +I
Sbjct: 723 VSTYGVMIRNLLK-----------EGSVEEADTMFSSMEKSGCAPSSRLLNDII 765



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 185/400 (46%), Gaps = 8/400 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMR 220
           YSIL+H     GR   +   F     + +    +  N LISA A+   +++A+ + ++M+
Sbjct: 375 YSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQ 434

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + YS +I +  R  ++ +  ++K  + I    IE +  + + +I GF   GD
Sbjct: 435 GQGVRPNVVTYSTLISAFCRMGRL-ADAMEKFSQMISIG-IEPNTAVYHSLIHGFCMHGD 492

Query: 281 ASKAMRFLGMAQGVGL-SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             KA  F+      GL  P    ++++I +L   GR ++A+ VF  +   G +P    +N
Sbjct: 493 LVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFN 552

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ GY  +G ++ A  V+  M   G+ PD  T + L+  Y  +G+ +   I+ +EM   
Sbjct: 553 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHK 612

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP +  Y+ +L G    G      ++  EM  SG   D   Y +++    + +    A
Sbjct: 613 KVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 672

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  F ++ +   + D    NT+I+  +K  R + A +LF  +   G  P  +TY +MI  
Sbjct: 673 ITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRN 732

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           L ++   E+   +  +M   G  P+      ++ +  Q G
Sbjct: 733 LLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 772



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 151/355 (42%), Gaps = 34/355 (9%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG-------- 349
           P+ A  AA+    + +  T +A  +F+EL   G     ++ N  L    +          
Sbjct: 40  PQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNG 99

Query: 350 -YLKDAEFVVSEMERSG--VLP-DEHTYSLLIDAYANAGRWE-----SARIVLKEMEVSH 400
             L  A F     E +G  V P    TY +L+D    A R +      AR++   ++   
Sbjct: 100 PALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGT 159

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +  +F+     A   D    +    +L  M      PD   YN +I +    +    A+
Sbjct: 160 IQATTFLKCLCHAKRTD----EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEAL 215

Query: 461 AAFDRMLSEG--IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               RM  EG    PD +++NT+I   FK G   +A  LF EM ++G  P   TYN +++
Sbjct: 216 DMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVD 275

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +    +  + +L  M  +G+ P+ VTY  ++  Y  SG +            ++   
Sbjct: 276 ALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWK-----------ESAKM 324

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           FR M + GL P  +  +S +++  +  R  +A  + QYM   G  PD+V+Y+ L+
Sbjct: 325 FRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILL 379



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 8/298 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF- 183
           ++HSL+   C     +  A   +S +    L     + +S +IH+L   GR     + F 
Sbjct: 479 VYHSLIHGFCMHGDLVK-AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFN 537

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++    R T +T+N+LI        +EKA  ++  M   G   D +  + ++    ++ 
Sbjct: 538 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSG 597

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           KID  L+  L++E+   K++      N V+ G  +AG  S A +        G +    T
Sbjct: 598 KIDDGLI--LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDT 655

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  +  T EA  +F +L     K      N ++    K+   ++A  + + + 
Sbjct: 656 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIS 715

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            SG++P+  TY ++I      G  E A  +   ME S   P+S + + I+     +G+
Sbjct: 716 TSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 773



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 95/202 (47%), Gaps = 2/202 (0%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L ++ + T +TYN ++    R      A  +  +M   G   D   Y ++++ L R + 
Sbjct: 609 MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 668

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D ++   L+ ++     + D  +LN +I    K     +A          GL P  +TY
Sbjct: 669 TDEAI--TLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTY 726

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G   EA+ +F  +++SG  P ++  N +++  ++ G +  A + +S+++ 
Sbjct: 727 GVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDG 786

Query: 364 SGVLPDEHTYSLLIDAYANAGR 385
           + +  +  T SLL+  +++ G+
Sbjct: 787 TIISLEASTTSLLMSLFSSKGK 808


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 281/629 (44%), Gaps = 44/629 (6%)

Query: 23  TRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQRY 82
           T   + F+PAFS  T   I   + S +S    + F   Q             L      +
Sbjct: 190 TMRKLKFRPAFSAYT-NLIGALSTSRDSDCMLTLFQQMQE------------LGYAVNVH 236

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
            FT L+   +     ++A +L     S N +E          P  + +++  +       
Sbjct: 237 LFTTLIRVFAREGRVDAALSLLDEMKS-NSLE----------PDVVLYNVCIDCFGKAGK 285

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYN 197
           +D+A+     ++ + L    ++ Y+ +I  L ++++L EA  L       +Q      YN
Sbjct: 286 VDMAWKXFHEMKANGLVLD-DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYN 344

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            +I         E A +L+ + R+ G     ++Y+ ++  L R  ++D +L  K ++E++
Sbjct: 345 TMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL--KKFEEMK 402

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
            D I  +    N +I    KAG    A+      +  GL P   T   ++  L  + R  
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A ++FE L     +P    Y +L++G  + G + +A  +  +M  +  +P+   Y+ LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             +   GR E    +  EM      P+  + +  +      GE ++   + +E+K+ G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y ++I    K    H A   F  M  +G   DT  +NT+ID   K G+ ++A +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            EEM+ +G+ P   TY  +I+ L + +R ++   L    +++G+  NVV Y++L+D +G+
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR D+A   +E L  +           GL P+    N L++A  + +  +EA    Q M
Sbjct: 702 VGRIDEAYLIMEELMQK-----------GLTPNVYTWNCLLDALVKAEEISEALVCFQSM 750

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           K+    P+ +TY+ L+  L ++ KF+K F
Sbjct: 751 KDLKCTPNYITYSILIHGLCKIRKFNKAF 779



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 226/507 (44%), Gaps = 46/507 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + K  +A+ L +RQR      + ++YN ++S   R   +++AL    +M+
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    +   Y+++I  L +  K++++L+ +       D ++ D  L  +VI        
Sbjct: 403 KDAIP-NLSTYNIMIDMLCKAGKLETALVVR-------DAMK-DAGLFPNVITVNIMVDR 453

Query: 281 ASKAMR-------FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
             KA R       F G+       P   TY ++I  L   GR  EA  ++E++ ++   P
Sbjct: 454 LCKAQRLDDACSIFEGLDHKT-CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP 512

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y +L++ + K G  +D   + +EM R G  PD    +  +D    AG  E  R + 
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +E++     P++  Y+ ++ G    G     +++   MK  G   DT  YN +ID F K 
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKS 632

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             ++ A    + M ++G EP  +T+ ++ID   K  R D A  LFEE + +G       Y
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           + +I+  G+  R ++   ++  +  +GL PNV T+  L+D   ++    +A+ C + + D
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKD 752

Query: 574 ------------------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                                   +A   ++ M+  G KP+     ++I+   +     E
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVE 812

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKAL 636
           A  + +  KE G   D   Y  +++ L
Sbjct: 813 ADTLFEKFKEKGGVADSAIYNAIIEGL 839



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 212/477 (44%), Gaps = 20/477 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L ++ KL  A ++    +   L P  +T N ++    +   L+ A ++   + 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAG 279
                 D + Y  +I+ L R  ++D +   KLY++ ++ ++I  +  +   +I  F K G
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAY--KLYEQMLDANQIP-NAVVYTSLIRNFFKCG 528

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                 +       +G SP        +  +  +G   +  A+F+E+K  G  P  ++Y 
Sbjct: 529 RKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYT 588

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G VK G+  +A  +   M+  G + D   Y+ +ID +  +G+   A  +L+EM+  
Sbjct: 589 ILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P    Y  ++ G          + + +E KS G+E +   Y+ +ID FGK   +  A
Sbjct: 649 GHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + ++ +G+ P+  TWN L+D   K      A   F+ M++    P   TY+I+I+ 
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +  ++         M+ QG  PNV TYTT++    ++G   +A    E   ++     
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG---- 824

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                 G+  S +  N++I       R ++A+ + +  +  G      T   L+ +L
Sbjct: 825 ------GVADSAI-YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 199/450 (44%), Gaps = 16/450 (3%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           ++  L +A   +  MR+  +   F  Y+ +I +L+ +   DS  +  L+++++     ++
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSR--DSDCMLTLFQQMQELGYAVN 234

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             L   +I  FA+ G    A+  L   +   L P    Y   I     +G+   A   F 
Sbjct: 235 VHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFH 294

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+K +GL      Y +++    K   L +A  +   M+++  +P  + Y+ +I  Y  AG
Sbjct: 295 EMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAG 354

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           ++E A  +L+        P+   Y+ IL+    +G+     +  +EMK   + P+   YN
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           +MID   K   L  A+   D M   G+ P+ IT N ++D   K  R D A  +FE +  +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  +I  LG   R ++  +L   M     +PN V YT+L+  + + GR +D 
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
            +            +  M   G  P  L LN+ ++   +     +  A+ Q +K  G  P
Sbjct: 534 HK-----------IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           D  +YT L+  L++    H+ +   LF+ +
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYE--LFYTM 610



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 211/474 (44%), Gaps = 24/474 (5%)

Query: 186 SQRQRLTPLTYNA----LISACARNDDLEKALNLM--SKMRQDGYHCDFINYSLVIQSLT 239
           S   RL  L  N     +I    R  D+  A+N    ++   D  HC    Y+ ++  + 
Sbjct: 83  SVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREA-YNSLLMVMA 141

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           RT K +   L+++ +E+             ++++ F K+    +A  F+   + +   P 
Sbjct: 142 RTRKFNC--LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPA 199

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            + Y  +I ALS S  +     +F++++E G       +  L++ + + G +  A  ++ 
Sbjct: 200 FSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLD 259

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM+ + + PD   Y++ ID +  AG+ + A     EM+ +    +   Y+ ++       
Sbjct: 260 EMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKAD 319

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 ++ + M  +   P  + YN MI  +G       A +  +R   +G  P  +++N
Sbjct: 320 RLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            ++ C  + G+ D A + FEEM++    P  +TYNIMI++L +  + E    +   M+  
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDA 438

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL PNV+T   +VD   ++ R DDA    EGL  +             +P  +   SLI 
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTC-----------RPDAVTYCSLIE 487

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             G   R  EA+ + + M +    P+ V YT+L++      R +  HK+++  L
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I  L + ++L EA++L     S+   L  + Y++LI    +   +++A  +M ++ 
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           Q G   +   ++ ++ +L +  +I  +L+  +  K+++C    +   +L   I G  K  
Sbjct: 717 QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL---IHGLCKIR 773

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA  F    Q  G  P   TY  +I+ L+ +G  +EA+ +FE+ KE G    +  YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           A+++G        DA  +  E    G      T  +L+D+   A   E A IV
Sbjct: 834 AIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIV 886



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEAFLL-- 185
           W+ LL  L  +    +++ A+V +    +L C    + YSILIH L +  K  +AF+   
Sbjct: 727 WNCLLDALVKAE---EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQ 783

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             Q+Q   P   TY  +IS  A+  ++ +A  L  K ++ G   D   Y+ +I+ L+  N
Sbjct: 784 EMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843

Query: 243 K 243
           +
Sbjct: 844 R 844


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 240/523 (45%), Gaps = 61/523 (11%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V A  +  LLK LC+   + D    V+  + +   C      Y+ L+  L    +  EA 
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPDVFSYNNLLKGLCDENRSQEAL 183

Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            L       R   +P   ++YN +++   +  D +KA +   +M   G   D + YS +I
Sbjct: 184 ELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSII 243

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  D    N ++ G+  +G   +A+  L   + 
Sbjct: 244 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 299

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY++++  L  +GR+ EA  +F+ + + GL+P    Y  LL+GY   G L +
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE 359

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD H +++LI AYA   + + A +                      
Sbjct: 360 MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML---------------------- 397

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                        V  +M+  G+ P+   Y  +ID   K   +  AM  F++M+ EG+ P
Sbjct: 398 -------------VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + I + +LI     C ++D+AEEL  EM +RG    T  +N +I+   ++ R  + ++L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M   G+ P+++TY TL+D             CL G  D+A      M + G+KP  + 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGC-----------CLAGKMDEATKLLASMVSVGVKPDIVT 553

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +LIN +    R  +A A+ + M  +G+ P+++TY  +++ L
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 119/529 (22%), Positives = 230/529 (43%), Gaps = 21/529 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC + + +D A  V++ + K+ +     + Y+ ++H    S +  EA    ++
Sbjct: 239 YSSIIAALCKAQA-MDKAMEVLNTMVKNGVMPDC-MTYNSILHGYCSSGQPKEAIGTLKK 296

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R   + P  +TY++L++   +N    +A  +   M + G   D   Y  ++Q       
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L   +  + I+ D  + N +I  +AK     +AM      +  GL+P    Y
Sbjct: 357 LVE--MHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 414

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L  SG   +A   FE++ + GL P    Y +L+ G         AE ++ EM  
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLD 474

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+  +   ++ +ID++   GR   +  +   M     KP+   Y+ ++ G    G+   
Sbjct: 475 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M S GV+PD   Y  +I+ + + + +  A+A F  M+S G+ P+ IT+N ++ 
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             F   R   A+EL+  + + G     +TYNI+++ L +    ++  R+  N+    L  
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              T+  ++    + GR            D+A + F     +GL P     + +     E
Sbjct: 655 ETRTFNIMIGALLKCGRM-----------DEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
                E   +   M+ENG   D     ++++ L++     +   +YLF 
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA-GTYLFM 751



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 12/192 (6%)

Query: 459 AMAAFDRMLSEG---IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A++ ++RM   G   + P   T+  LI C  + GR D        + ++G+     T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 516 MINLLGEQERWEDVKRL-LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++  L   +R  D   + L  M   G +P+V +Y  L+       R  +A+E L  ++D 
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   R  G  P  ++ N+++N F ++    +A++    M + G+ PDVVTY++++ 
Sbjct: 193 --------RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244

Query: 635 ALIRVDKFHKVF 646
           AL +     K  
Sbjct: 245 ALCKAQAMDKAM 256



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 7/242 (2%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI     + K+ EA      ++S   +   +TY  LI+   R   ++ AL L  +
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   + I Y++++Q L  T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAA--KELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F     +GL P  + Y
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + + +  ++ G L++ + +   ME +G   D    + ++      G    A   L  ++ 
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 399 SH 400
            H
Sbjct: 755 KH 756



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G   + +T+T L+       R  DA++ 
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M   G  P   + N+L+    ++ R  EA  +L  M ++   G  P
Sbjct: 150 V----------LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+Y T++    +     K +S+Y
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTY 224



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/248 (20%), Positives = 108/248 (43%), Gaps = 23/248 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+   R  ++ +A  L +      ++P  +TYN ++           A  L   + 
Sbjct: 554 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 613

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y++++  L + N  D +L  ++++ +    ++L+ +  N +I    K G 
Sbjct: 614 KSGTQLELSTYNIILHGLCKNNLTDEAL--RMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY+ +   L   G   E + +F  ++E+G    ++  N+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGV---LPDEHTYSLLIDAYANAGRWESARIVLKEM- 396
           +++  ++ G          ++ R+G    + DE  +SL  +A   +   ES+ IV +++ 
Sbjct: 732 IVRKLLQRG----------DITRAGTYLFMIDEKHFSL--EASTASFLLESSPIVWEQIS 779

Query: 397 EVSHAKPN 404
            +SH   N
Sbjct: 780 RISHLSVN 787


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 215/487 (44%), Gaps = 22/487 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTPLTYNALISACA--RNDDLEKALNLMSKMR 220
           Y+ ++  L R++   +A LL +R    R+ P T+   ++A A  R      AL L+  M 
Sbjct: 148 YNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMA 207

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D + Y  VI +L     +  +    L  E+       D    NDV++G    G 
Sbjct: 208 RHGCVPDAVLYQTVIHALVAQGGVAEA--ATLLDEMLLMGCAADVNTFNDVVLGLCGLGH 265

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A R +      G +P   TY  ++  L  + +  EA A+   + E  +       N 
Sbjct: 266 VREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV----MLNT 321

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +++G +  G L  A  +   M   G  PD HTY++L+      GR  SA  +L EME   
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS +L  +   G W     +L +M + G   ++  YN +I   GK   L  AM
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAM 441

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M S+G +PD  T+NT+I       + D AE +F  + E G      TYN +I+ L
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               RW++  RL   M   G   +VV+Y  L+              C EG  D+++    
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL-----------CKEGNVDRSMMLLE 550

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M T G+KP+N + N LIN   +  +  +A  + + M   GL PD+VTY TL+  L +V 
Sbjct: 551 EMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 610

Query: 641 KFHKVFS 647
             H   +
Sbjct: 611 WTHAALN 617



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 180/396 (45%), Gaps = 5/396 (1%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C    + Y  L+  L R+ +  EA+ +L +   +  +  N +I  C     L +A  L  
Sbjct: 281 CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYE 340

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   Y++++  L +  +  S++  ++  E+E      +    + ++  F +
Sbjct: 341 MMGSKGCPPDVHTYNILMHGLCKLGRCGSAV--RMLDEMEEKGCAPNIVTYSTLLHSFCR 398

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A   L      G S  +  Y  +I AL   G+  EA  + +E+K  G KP    
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++        + +AE +   +   GV+ +  TY+ LI A  ++GRW+    +  EM 
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM- 517

Query: 398 VSHAKPNSFI-YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           V H  P   + Y+ ++      G   R+  +L+EM + G++P+   YN++I+   K   +
Sbjct: 518 VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKV 577

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+     ML++G+ PD +T+NTLI+   K G    A  L E++      P   TYNI+
Sbjct: 578 RDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNIL 637

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           I+   +    +D   LL    + G++PN  T+  +V
Sbjct: 638 ISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 192/465 (41%), Gaps = 36/465 (7%)

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP 193
           + LC    + D A A++  + +H  C    +LY  +IHAL     + EA  L     L  
Sbjct: 188 RALCRLGRARD-ALALLRGMARHG-CVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245

Query: 194 L-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
                 T+N ++        + +A  L+ +M   G     + Y  +++ L RT + D + 
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305

Query: 249 LQ-----------------------------KLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                                          +LY+ +       D    N ++ G  K G
Sbjct: 306 AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLG 365

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A+R L   +  G +P   TY+ ++ +   +G   +A A+ +++   G    ++ YN
Sbjct: 366 RCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN 425

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++    K G L +A  +V EM+  G  PD  TY+ +I    N  + + A  +   +   
Sbjct: 426 GIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
               N   Y+ ++      G WQ   ++  EM   G   D   YN +I    K   +  +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           M   + M+++GI+P+  ++N LI+   K G+   A EL +EM  +G  P   TYN +IN 
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           L +         LL  +  + + P++VTY  L+  + +    DDA
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 650



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 28/379 (7%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           M +   ++P   +Y AV++ L+ +    +A  ++  +    + P T  +    +   ++G
Sbjct: 135 MPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLG 194

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
             +DA  ++  M R G +PD   Y  +I A    G    A  +L EM +     +   ++
Sbjct: 195 RARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFN 254

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G  +   +++  M   G  P    Y  ++    +      A A    ML  
Sbjct: 255 DVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA----MLGR 310

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
             E + +  NT+I      G+  RA EL+E M  +G  P   TYNI+++ L +  R    
Sbjct: 311 VPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSA 370

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS----------------- 572
            R+L  M  +G  PN+VTY+TL+  + ++G +DDA   L+ +S                 
Sbjct: 371 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYA 430

Query: 573 -------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                  D+A+   + M++ G KP     N++I     + +  EA  +   + E G+  +
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 626 VVTYTTLMKALIRVDKFHK 644
            +TY TL+ AL+   ++ +
Sbjct: 491 GITYNTLIHALLHSGRWQE 509



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 7/255 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+ALG+  KL EA  L Q    Q   P   TYN +I     ND +++A ++   + 
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   + I Y+ +I +L  + +    L  +L  E+      LD    N +I    K G+
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGL--RLANEMVLHGCPLDVVSYNGLIKALCKEGN 541

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             ++M  L      G+ P   +Y  +I  L  +G+  +A  + +E+   GL P    YN 
Sbjct: 542 VDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 601

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K+G+   A  ++ ++    V PD  TY++LI  +      + A ++L +     
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGG 661

Query: 401 AKPNSFIYSRILAGY 415
             PN   +  ++  +
Sbjct: 662 IVPNERTWGMMVQNF 676


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 218/464 (46%), Gaps = 17/464 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           R+  +T N LI      +  + A++++  +M + GY  D  +Y+ +I+ L    K   +L
Sbjct: 123 RVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 182

Query: 249 LQKLYKEIECD---KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             +L   +  D       +    N VI GF K G+  KA        G GL P   TY +
Sbjct: 183 --ELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L  +    +A A+ + + + G+ P T+ YN +++GY  +G L++A  ++ +M  SG
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  TYSLLI  Y   GR   AR V   M     KPNS IY  +L GY  +G      
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L  M   G+  +   +N++I  + K+  +  AM AF  M   G+ PD ++++T+I   
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR + A   F +M   G  P   ++  +I+ L     W+ V+ L   M  +G+ P+ 
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +   T++D             C EG   +A + F ++   G+KP  ++ N+LI+ +    
Sbjct: 481 IFMNTIMDNL-----------CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  E+   L  M   GL+PD  TY +L+    +  +     + Y
Sbjct: 530 KMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALY 573



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 244/578 (42%), Gaps = 76/578 (13%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           + L+K LC  N + D    V   + +  L Y+ ++  Y+ LI  L   +K  EA  L   
Sbjct: 130 NQLIKGLCDGNRTDDAMDMVFRRMPE--LGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 189 Q------RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                    +P  ++YN +I    +  +++KA  L  +M   G   D + Y+ +I  L +
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
              +D +  +LQ ++ +     +  D +  N +I G+   G   +A+R L    G GL P
Sbjct: 248 AQAMDKAVAILQHMFDK----GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP 303

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD----- 353
              TY+ +I      GR  EA +VF+ +   G KP +  Y+ LL GY   G L D     
Sbjct: 304 DVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 363

Query: 354 ------------------------------AEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
                                         A    +EM ++G+ PD  +YS +I      
Sbjct: 364 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKT 423

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR E A     +M      PN   ++ ++ G    GEW++  ++  EM + G+ PD  F 
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 483

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N ++D   K   +  A   FD ++  G++PD +++NTLID +   G+ D + +  + M  
Sbjct: 484 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P + TYN ++N   +  R ED   L   M  + +    +T   ++    Q+GR   
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603

Query: 564 AIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A E                        C     D+A+  F  +R+   +      + +IN
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           A  +  R  EA ++   M   G  PDV+TY+ ++K+ I
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHI 701



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 171/381 (44%), Gaps = 7/381 (1%)

Query: 165 LYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y IL+H       L +       ++          +N LI A A++  ++KA+   ++M
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 401

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ+G   D ++YS VI  L +T +++ ++    + ++  + +  +      +I G    G
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYH--FNQMVSEGLSPNIISFTSLIHGLCSIG 459

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +  K           G+ P       ++  L   GR +EA+  F+ +   G+KP   +YN
Sbjct: 460 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYN 519

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY  +G + ++   +  M   G+ PD  TY+ L++ Y   GR E A  + +EM   
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             K  +   + +L G    G      ++  +M   G +     YN ++    + +C+  A
Sbjct: 580 DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEA 639

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  F+ + S+  E D  T++ +I+   K GR D A+ LF  M  RG  P   TY++MI  
Sbjct: 640 LRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKS 699

Query: 520 LGEQERWEDVKRLLGNMRAQG 540
             E+   E+   L  +M   G
Sbjct: 700 HIEEGLLEESDNLFLSMEKNG 720



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 216/521 (41%), Gaps = 86/521 (16%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L +++ + +A  + Q    + + P   TYN +I        LE+A+ L+ KM 
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297

Query: 221 QDGYHCDFINYSLVIQ----------------SLTRTNKIDSSLL--------------- 249
             G   D + YSL+IQ                S+ R  +  +S +               
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357

Query: 250 --QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
             + L   +  D I  + +  N +I  +AK G   KAM      +  GL P   +Y+ VI
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L  +GR  +A   F ++   GL P   ++ +L+ G   +G  K  E +  EM   G+ 
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 477

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD    + ++D     GR   A+     +     KP+   Y+ ++ GY   G+   + + 
Sbjct: 478 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ 537

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L  M S G+ PD+  YN +++ + K   +  A+A +  M  + ++   IT N ++   F+
Sbjct: 538 LDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQ 597

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYN--------------------------------- 514
            GR   A EL+ +M +RG      TYN                                 
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657

Query: 515 --IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             I+IN L +  R ++ K L   M  +G +P+V+TY+ ++  +         IE  EGL 
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH---------IE--EGLL 706

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGE--DQRDAEAF 611
           +++ N F  M  +G    +  LN ++    E  D R A  +
Sbjct: 707 EESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTY 747



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 15/209 (7%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M  SGV        ++I  F     L  A AAF   L  G     +T N LI       R
Sbjct: 82  MVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNR 141

Query: 491 YDRAEEL-FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG---LLPNVV 546
            D A ++ F  M E GY P   +YN +I  L  +++ ++   LL +M A G     PNVV
Sbjct: 142 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVV 201

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +Y T++D     G F       EG  D+A   F  M   GL P  +  NSLI+   + Q 
Sbjct: 202 SYNTVID-----GFFK------EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA 250

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             +A A+LQ+M + G+ PD  TY  +++ 
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRG 279


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 257/543 (47%), Gaps = 35/543 (6%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ 189
           ++ LK LC +  + D A  V+        C    + Y+ +I +L    +  EA  + QR 
Sbjct: 195 NTFLKCLCHAKRT-DEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRM 253

Query: 190 -----RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
                R +P  +++N +I    +  ++ KA NL+++M Q G   D + Y+ ++ +L +  
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D + L  + +++    +E DG     +I G++ +G   ++ +        GL P   T
Sbjct: 314 AMDKAEL--VLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           + + +++L   GR+ +AE +F+ +   G  P   +Y+ LL GY   G   D   +   M 
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G++ + H +++LI A+A  G  + A +V  EM+    +P+   YS +++ +   G   
Sbjct: 432 DKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLA 491

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPDTITWNTL 481
              +   +M S G+EP+T  Y+ +I  F  +  L  A      M+S+GI  P+ + ++++
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSI 551

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRA 538
           I      GR   A ++F  +   G  P   T+N +I+   L+G+ E+   V   L  M +
Sbjct: 552 IHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV---LDAMVS 608

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G+ P+VVTY TLV  Y +SG+ DD +             FR M    +KP+ +  + ++
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLI-----------LFREMLHKKVKPTTVTYSIVL 657

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD-------KFHKVFSSYLF 651
           +      R + A  +   M ++G   D+ TY  L+K L R D        FHK+ +    
Sbjct: 658 DGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCK 717

Query: 652 FNI 654
           F+I
Sbjct: 718 FDI 720



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 224/486 (46%), Gaps = 22/486 (4%)

Query: 166 YSILIHALGRSEK--LYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           Y IL+    R+ +  L  AF   LL    R   +  N  +         ++A++ L+ +M
Sbjct: 159 YGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRM 218

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
              G   + I+Y+ VI+SL   ++   +L  +Q++ KE    +   D    N VI GF K
Sbjct: 219 SDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKE--GGRCSPDVVSFNTVIHGFFK 276

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+ SKA   +      G+ P   TY +++ AL  +    +AE V  ++ + G++P    
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y A++ GY   G+ K++  +  +M   G++P   T++  + +    GR + A  + + M 
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+   YS +L GY   G +     +   M   G+  + H +N++I    K   + 
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AM  F  M  +G+ PD +T++TLI    + GR   A E F +M   G  P T  Y+ +I
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516

Query: 518 NLLGEQERWEDVKRLLGNMRAQGL-LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +           K L+  M ++G+  PN+V +++++      GR  DA +          
Sbjct: 517 HGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD---------- 566

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F ++   G +P+ +  NSLI+ +    +  +AF VL  M   G++PDVVTY TL+   
Sbjct: 567 -VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625

Query: 637 IRVDKF 642
            +  K 
Sbjct: 626 CKSGKI 631



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 218/477 (45%), Gaps = 25/477 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           ++YN +I +   +   ++AL+++ +M ++G  C  D ++++ VI    +  ++  +    
Sbjct: 228 ISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC--N 285

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  E+    +E D    N ++    KA    KA   L      G+ P   TY A+I   S
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG   E+  +F ++   GL P    +N+ +    K G  KDAE +   M   G +PD  
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           +YS+L+  YA  GR+     +   M       N   ++ +++ +  RG       V  EM
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  GV PD   Y+ +I  F +   L  AM  F +M+S G+EP+T+ +++LI      G  
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDL 525

Query: 492 DRAEELFEEMQERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            +A+EL  EM  +G   P    ++ +I+ L  + R  D   +   +   G  P +VT+ +
Sbjct: 526 VKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNS 585

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D Y           CL G  ++A      M + G++P  +  N+L++ + +  +  + 
Sbjct: 586 LIDGY-----------CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNI--YKML 658
             + + M    +KP  VTY+ ++  L    +       FH++  S    +I  YK+L
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 204/476 (42%), Gaps = 54/476 (11%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L Y+ +IH    S    E+   F     + L P  +T+N+ +S+  ++   + A  +   
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G+  D ++YS+++       +     +  L+  +    I  +    N +I   AK 
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFAD--MNNLFHSMADKGIVANCHCFNILISAHAKR 452

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +AM      QG G+ P   TY+ +I+A    GR  +A   F ++   GL+P T  Y
Sbjct: 453 GMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVY 512

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           ++L+ G+   G L  A+ +VSEM   G+  P+   +S +I +  N GR   A  V   + 
Sbjct: 513 HSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVI 572

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P    ++ ++ GY   G+ ++ F VL  M S G+EPD   YN ++  + K   + 
Sbjct: 573 HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKID 632

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM---------------- 501
             +  F  ML + ++P T+T++ ++D  F  GR   A+++F EM                
Sbjct: 633 DGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILL 692

Query: 502 ----------------QERGYFPC---TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                            + G   C    T  N +IN L +  R E+   L   +   GL+
Sbjct: 693 KGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLV 752

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           PNV TY  ++    +           EG  ++A   F  M   G  PS+  LN +I
Sbjct: 753 PNVSTYGVMIHNLLK-----------EGSVEEADTMFSSMEKSGCAPSSRLLNDII 797



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 212/454 (46%), Gaps = 15/454 (3%)

Query: 115 FKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHA 172
           F+   S   +P  + ++S + +LC    S D A  +  ++      +  +L+ YSIL+H 
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD-AEEIFQYMTTKG--HMPDLVSYSILLHG 413

Query: 173 L---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
               GR   +   F     + +      +N LISA A+   +++A+ + ++M+  G   D
Sbjct: 414 YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + YS +I +  R  ++ +  ++K  + I    +E +  + + +I GF   GD  KA   
Sbjct: 474 VVTYSTLISAFCRMGRL-ADAMEKFSQMISIG-LEPNTVVYHSLIHGFCMHGDLVKAKEL 531

Query: 288 LG--MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           +   M++G+   P    ++++I +L N GR ++A  VF  +   G +P    +N+L+ GY
Sbjct: 532 VSEMMSKGIP-RPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGY 590

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
             +G ++ A  V+  M   G+ PD  TY+ L+  Y  +G+ +   I+ +EM     KP +
Sbjct: 591 CLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 650

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             YS +L G    G      ++  EM  SG   D   Y +++    + +    A+  F +
Sbjct: 651 VTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 710

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           + +   + D    NT+I+  +K  R + A +LF  +   G  P  +TY +MI+ L ++  
Sbjct: 711 LGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGS 770

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            E+   +  +M   G  P+      ++ +  Q G
Sbjct: 771 VEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 34/364 (9%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG-------- 349
           P+ A  AA+    + +  T +A  +F+EL   G      A N  L    +          
Sbjct: 72  PQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNG 131

Query: 350 -YLKDAEFVVSEMERSG--VLP-DEHTYSLLIDAYANAGRWES-----ARIVLKEMEVSH 400
             L  A F     E +G  V P   HTY +L+D    A R +      AR++   +    
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N+F+     A   D    +    +L  M   G  P+   YN +I +    +    A+
Sbjct: 192 IEANTFLKCLCHAKRTD----EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEAL 247

Query: 461 AAFDRMLSEG--IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               RM  EG    PD +++NT+I   FK G   +A  L  EM ++G  P   TYN +++
Sbjct: 248 DMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVD 307

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +    +  + +L  M  +G+ P+ +TYT ++  Y  SG +            ++   
Sbjct: 308 ALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWK-----------ESAKM 356

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           FR M + GL P  +  NS +++  +  R  +A  + QYM   G  PD+V+Y+ L+     
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416

Query: 639 VDKF 642
             +F
Sbjct: 417 EGRF 420



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 8/298 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF- 183
           ++HSL+   C     +  A  +VS +    +     + +S +IH+L   GR    ++ F 
Sbjct: 511 VYHSLIHGFCMHGDLVK-AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++    R T +T+N+LI        +EKA  ++  M   G   D + Y+ ++    ++ 
Sbjct: 570 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG 629

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           KID  L+  L++E+   K++      + V+ G   AG  S A +        G +    T
Sbjct: 630 KIDDGLI--LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDT 687

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  +  T EA  +F +L     K      N ++    K+   ++A  + + + 
Sbjct: 688 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIS 747

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            SG++P+  TY ++I      G  E A  +   ME S   P+S + + I+     +G+
Sbjct: 748 TSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 805



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 103/225 (45%), Gaps = 7/225 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+    +S K+ +       +L ++ + T +TY+ ++           A  +  +M 
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y ++++ L R +  D ++   L+ ++     + D  +LN VI    K   
Sbjct: 678 DSGTAVDIDTYKILLKGLCRNDLTDEAI--TLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P  +TY  +I  L   G   EA+ +F  +++SG  P ++  N 
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 795

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +++  ++ G +  A + +S+++ + +  +  T SLL+  +++ G+
Sbjct: 796 IIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 19/193 (9%)

Query: 460 MAAFDRMLSEGIEPDTI-----TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           +A F+R+  E   P        T+  L+DC  +  R D     F  +   G    T   N
Sbjct: 136 LALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEAN 195

Query: 515 IMINLLGEQERW-EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +  L   +R  E V  LL  M   G +PN ++Y T++              C +  S 
Sbjct: 196 TFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSL-----------CGDSRSQ 244

Query: 574 QAVNAFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           +A++  + M  +G    P  ++ N++I+ F +    ++A  ++  M + G++PDVVTY +
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304

Query: 632 LMKALIRVDKFHK 644
           ++ AL +     K
Sbjct: 305 IVDALCKARAMDK 317


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 209/448 (46%), Gaps = 18/448 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQ 250
           + +  L+SA  +      A+  +SK M   G   D    S++I   +   ++D   S+  
Sbjct: 95  IQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFS 154

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K+ K      ++ D    N +I G  K G  ++A+ F    +  G  P   TY  +I  L
Sbjct: 155 KMIKL----GLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGL 210

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G T  A  +F++++E+G +P    YN L+    K   + +A  + S M+   + PD 
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI    N  RW+ A  +L EM   +  PN F ++ ++      G+      V K 
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   GVEPD   Y+ ++  +     +  A   FD M+++G +PD  ++N LI  + K  R
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A++LF EM  +G  P    YN +I+ L +  R  + + L  NM + G LP++ TY+ 
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D +           C EG   +A   FRVM++  LKP     N LI+A  +     +A
Sbjct: 451 LLDGF-----------CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +   +   GL P+V  YTT++  L +
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCK 527



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 224/506 (44%), Gaps = 54/506 (10%)

Query: 166 YSILIHALGRSEKLYEAFL-LSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           ++ L+ A+ +  + Y A + LS++  L  L     T + LI   +    ++ A ++ SKM
Sbjct: 97  FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D + ++ +I  L +  K   ++  + + + E    +        +I G  K G
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAV--EFFDDFEASGCQPTVYTYTTIINGLCKIG 214

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + + A       +  G  P   TY  +I +L       EA  +F  +K   + P    YN
Sbjct: 215 ETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYN 274

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G       K+A  +++EM    ++P+  T+++L+DA    G+   A+ V K M   
Sbjct: 275 SLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM 334

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+   YS ++ GY  R E     ++   M + G +PD   YN++I  + K   +  A
Sbjct: 335 GVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP----------- 508
              F+ M+ +G+ PD + +NTLI    + GR   A++LF+ M   G  P           
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDG 454

Query: 509 -C-----------------------TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            C                          YNI+I+ + +    +D ++L   +  QGLLPN
Sbjct: 455 FCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPN 514

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           V  YTT+++             C EGL D+A+ AFR M  DG  P   + N +I  F + 
Sbjct: 515 VQIYTTIINNL-----------CKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYT 630
           + ++ A  ++  M++ G   +  T T
Sbjct: 564 KDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 158/354 (44%), Gaps = 15/354 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLSP   T + +I   S+  R   A +VF ++ + GL+P    +N L+ G  K+G    A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                + E SG  P  +TY+ +I+     G   +A  + K+ME +  +PN   Y+ ++  
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                       +   MK+  + PD   YN +I     +     A A  + M S  I P+
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV--KRL 532
             T+N L+D   K G+   A+ +F+ M E G  P   TY+ +  + G   R E V  ++L
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL--MYGYSLRMEIVEARKL 362

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+  +Y  L+  Y ++ R D+A +            F  M   GL P N+
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ-----------LFNEMIHQGLTPDNV 411

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             N+LI+   +  R  EA  + + M  NG  PD+ TY+ L+    +     K F
Sbjct: 412 NYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 225/540 (41%), Gaps = 68/540 (12%)

Query: 66  EEEEDDD--DVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRA 123
           ++ + DD     ++      F  +L       + E    +      L+ +  K+ + Y A
Sbjct: 62  DKHKHDDASSFRNIDDALASFNHML-------HREPLPCIIQFTKLLSAI-VKMGQYYGA 113

Query: 124 V-------------PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           V             P     S+L +  S    +DLA++V S + K  L     + ++ LI
Sbjct: 114 VISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGL-QPDAVTFNTLI 172

Query: 171 HALGRSEKLYEA------FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           + L +  K  +A      F  S  Q  T  TY  +I+   +  +   A  L  KM + G 
Sbjct: 173 NGLCKVGKFAQAVEFFDDFEASGCQP-TVYTYTTIINGLCKIGETTAAAGLFKKMEEAGC 231

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF--------- 275
             + + Y+++I SL +   ++ +L   ++  ++  +I  D    N +I G          
Sbjct: 232 QPNVVTYNILIDSLCKDKLVNEAL--DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEA 289

Query: 276 --------------------------AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                                      K G  S+A         +G+ P   TY++++  
Sbjct: 290 SALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYG 349

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
            S     +EA  +F+ +   G KP   +YN L+KGY K   + +A+ + +EM   G+ PD
Sbjct: 350 YSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD 409

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y+ LI      GR   A+ + K M  +   P+ F YS +L G+   G   + F++ +
Sbjct: 410 NVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR 469

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M+S+ ++PD   YN++ID   K+  L  A   F  +  +G+ P+   + T+I+   K G
Sbjct: 470 VMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEG 529

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D A E F  M+  G  P   +YN++I    + +      +L+G MR +G +    T T
Sbjct: 530 LLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           LP ++ +T L+    + G++  A+  L           + M   GL P    L+ LI+ F
Sbjct: 91  LPCIIQFTKLLSAIVKMGQYYGAVISLS----------KQMELAGLSPDIYTLSILIDCF 140

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              QR   AF+V   M + GL+PD VT+ TL+  L +V KF
Sbjct: 141 SHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 211/468 (45%), Gaps = 23/468 (4%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQD 222
           +I I  L    +L EA  L +R    + P  +TYN L+    ++  +++A   + +M   
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           G   D   Y+ +I    ++  +  +   L   ++K    D++         +I G    G
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTY-----CSLINGLCAEG 364

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D  +A+     AQ   L P    Y +++  L   G  + A  V  E+ E G  P    YN
Sbjct: 365 DIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYN 424

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ G  KMG + DA  V+++    G LPD  T++ LID Y    + +SA  +++ M   
Sbjct: 425 IIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   Y+ +L G    G+ +   +  +EM   G  P+   YN++I+ F K N L  A
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                RM  +G+ PD +++NTLI    + G  D A  LF+++ E+GY     T+NI+I  
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              +   +  +++ G M ++G  P++ TY  LVD             C     D+A    
Sbjct: 605 YSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGL-----------CKAANVDRAYAHL 653

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             M + G  PS      ++N    + R +EA A++  M   G+ P+VV
Sbjct: 654 AEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/574 (23%), Positives = 240/574 (41%), Gaps = 54/574 (9%)

Query: 127 PLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLS 186
           P + +L++ L S+    D+  A+ S  + H    S + LY   I A  R+ +L  A    
Sbjct: 36  PAYRALIRELVSAGRLDDVDAALASA-RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAF 94

Query: 187 QRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +R  L         YNA++ A       ++A  +  +M   G   D   +++ ++S   T
Sbjct: 95  ERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLT 154

Query: 242 NKIDSSL-LQKLYKEIECDK--------------------------------IELDGQLL 268
            +   +L L +   E  CD                                 +  D    
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATF 214

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N+V+    + GD  ++   L      G+S    T    I  L   GR  EA A+ E +  
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG- 273

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           + + P    YN L++G  K   +++A   +  M   G +PD+ TY+ +ID Y  +G  + 
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+       P+   Y  ++ G    G+ +R  ++  E ++  ++PD   YN ++ 
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVK 393

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   + HA+   + M+ EG  PD  T+N +I+   K G    A  +  +   +GY P
Sbjct: 394 GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLP 453

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+N +I+   ++ + +   +L+  M   G+ P+V+TY ++++   ++G+  +  E  
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNE-- 511

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M   G +P+ +  N LI  F +  +  EA  V+  M ++GL PD V+
Sbjct: 512 ---------TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           + TL+    R         +YL F       YS 
Sbjct: 563 FNTLIHGFCRNGDLD---GAYLLFQKLDEKGYSA 593



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 208/486 (42%), Gaps = 58/486 (11%)

Query: 169 LIHALGRSEKLYE-----AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           ++HAL +   + E     A +L +       T N  I     +  LE+A+ L+ +M   G
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM---G 273

Query: 224 YHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            +   D + Y+ +++ L + +K+  +  Q L + +    I  D    N +I G+ K+G  
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAA-QYLGRMMNQGCIP-DDFTYNTIIDGYCKSGML 331

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A   L  A   G  P   TY ++I  L   G    A  +F E +   LKP    YN+L
Sbjct: 332 QEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +KG  + G +  A  V++EM   G  PD  TY+++I+     G    A +V+ +      
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA----- 446

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
                    I+ GY                      PD   +N +ID + K   L  A+ 
Sbjct: 447 ---------IVKGYL---------------------PDVFTFNTLIDGYCKRLKLDSALQ 476

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             +RM + GI PD IT+N++++   K G+     E FEEM  +G  P   TYNI+I    
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  + E+   ++  M   GL+P+ V++ TL+  + ++G  D A    + L ++       
Sbjct: 537 KINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK------- 589

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               G   +    N LI A+        A  +   M   G KPD+ TY  L+  L +   
Sbjct: 590 ----GYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645

Query: 642 FHKVFS 647
             + ++
Sbjct: 646 VDRAYA 651


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 240/528 (45%), Gaps = 40/528 (7%)

Query: 168 ILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +++  LGR      + KL++   L     L    Y  ++ A +R     +A+ +  +M +
Sbjct: 192 LMVRILGRESQHTVASKLFDVIPLDDYV-LDVRAYTTILHAYSRTGKYHRAIEIFERMNE 250

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     + Y++++    +  +    +L+ L  E+    ++ D    + V+    + G  
Sbjct: 251 SGLSPSLVTYNVMLDVYGKMGRSWDKILE-LLDEMRSRGLDFDEFTCSTVLSACGREGLI 309

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A  F    +  G  P T TY A++     +G   EA +V  E++E+   P    YN +
Sbjct: 310 DEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEV 369

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  YV+ G+ ++   V+  M   G++P+  TY+ +I+AY   G  + A  +  +M     
Sbjct: 370 VAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGC 429

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN   Y+ +L     +   +   ++L  MK +G  P+   +N M+   GK     +   
Sbjct: 430 VPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQ 489

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M + G EPD  T+NTLI  + +CG  + A ++ EEM + G+ PC  TYN ++N L 
Sbjct: 490 VFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALA 549

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-GLSDQAV---- 576
            +  W+  + ++ +MR +G  P+  +Y+ +V  Y + G     IE +E  + D  +    
Sbjct: 550 RRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV-KGIEMIEKSIYDGDIFPSW 608

Query: 577 --------------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                                AF+ ++  G KP  +  NS+++ F ++     A  +L+ 
Sbjct: 609 MLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRL 668

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
           + + GL+PD+VT+ +LM      D + +    +    + +ML  SG K
Sbjct: 669 IHDAGLQPDLVTHNSLM------DMYARGGDCWKAEEVLRMLQTSGGK 710



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 212/479 (44%), Gaps = 20/479 (4%)

Query: 163 ELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E   S ++ A GR   + EA      L S+  +   +TYNAL+    +     +AL+++S
Sbjct: 293 EFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLS 352

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M ++    D + Y+ V+ +  R    +   +  +   +    I  +      +I  + +
Sbjct: 353 EMEENNCPPDAVTYNEVVAAYVRAGFHEEGAV--VIDAMASKGIMPNAVTYTTIINAYGR 410

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD  KA+        +G  P  ATY AV+  L     + E   +   +K +G  P    
Sbjct: 411 VGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHIT 470

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N +L    K G  K    V  EM+  G  PD  T++ LI AY   G    A  + +EM 
Sbjct: 471 WNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMI 530

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P    Y+ +L     RG+W+    V+ +M++ G  P    Y++M+ ++ K   + 
Sbjct: 531 KAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVK 590

Query: 458 HAMAAFDRMLSEG-IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             +   ++ + +G I P  +   TL+  +FKC      E  F+ +Q+ GY P     N M
Sbjct: 591 -GIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSM 649

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +++  +   ++    +L  +   GL P++VT+ +L+D+Y + G      +C      +A 
Sbjct: 650 LSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGG------DCW-----KAE 698

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              R+++T G KP  ++ N++I  F       E   +L  M   G+ P + TY T +  
Sbjct: 699 EVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISG 757



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 227/503 (45%), Gaps = 32/503 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACAR-NDDLEKALNLMSKM 219
           Y+ ++HA  R+ K + A  + +R     L+P  +TYN ++    +     +K L L+ +M
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEM 284

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D    S V+ +  R   ID +  ++ +  ++ +  +      N ++  F KAG
Sbjct: 285 RSRGLDFDEFTCSTVLSACGREGLIDEA--REFFSGLKSEGYKPGTVTYNALLHVFGKAG 342

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             S+A+  L   +     P   TY  V+ A   +G   E   V + +   G+ P    Y 
Sbjct: 343 IFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYT 402

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++  Y ++G +  A  +  +M   G +P+  TY+ ++         E    +L  M+++
Sbjct: 403 TIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLN 462

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   ++ +LA    +G  +   QV +EMK+ G EPD   +N +I  +G+    + A
Sbjct: 463 GCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDA 522

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + M+  G  P   T+N L++   + G +  AE +  +M+ +G+ P  T+Y++M++ 
Sbjct: 523 AKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHS 582

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV-------DIYGQSGRFD---------D 563
             +    + ++ +  ++    + P+ +   TLV        + G    F          D
Sbjct: 583 YAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPD 642

Query: 564 AIECLEGLS--------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + C   LS        D+A    R++   GL+P  +  NSL++ +       +A  VL+
Sbjct: 643 LVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLR 702

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            ++ +G KPD+V+Y T++K   R
Sbjct: 703 MLQTSGGKPDLVSYNTVIKGFCR 725



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 212/485 (43%), Gaps = 24/485 (4%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+H  G++    EA  +LS+ +     P  +TYN +++A  R    E+   ++  M 
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMA 390

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I +  R   ID +L  +++ ++       +    N V+    K   
Sbjct: 391 SKGIMPNAVTYTTIINAYGRVGDIDKAL--EMFDQMMELGCVPNVATYNAVLGMLGKKSL 448

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + + M+ LG  +  G SP   T+  ++      G       VF E+K  G +P    +N 
Sbjct: 449 SEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNT 508

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G   DA  +  EM ++G  P  +TY+ L++A A  G W++A  V+ +M    
Sbjct: 509 LISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKG 568

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   YS ++  Y   G  +    + K +    + P       ++    K   L    
Sbjct: 569 FRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGME 628

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF  +   G +PD +  N+++    K   YDRA E+   + + G  P   T+N ++++ 
Sbjct: 629 RAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMY 688

Query: 521 ---GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
              G+  + E+V R+L   +  G  P++V+Y T++  +           C +GL  + + 
Sbjct: 689 ARGGDCWKAEEVLRML---QTSGGKPDLVSYNTVIKGF-----------CRKGLMQEGIR 734

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M + G+ P     N+ I+ +       E   V+ YM  +  +P+ +TY  +     
Sbjct: 735 ILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYC 794

Query: 638 RVDKF 642
           +  ++
Sbjct: 795 KARRY 799



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/415 (22%), Positives = 177/415 (42%), Gaps = 37/415 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  +I+A  R  D++KAL +  +M + G   +   Y+ V+  L +  K  S  + K+ 
Sbjct: 399 VTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGK--KSLSEEMMKIL 456

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             ++ +    +    N ++    K G      +     +  G  P   T+  +I+A    
Sbjct: 457 GHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRC 516

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   +A  + EE+ ++G  P    YNALL    + G  K AE V+ +M   G  P E +Y
Sbjct: 517 GSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSY 576

Query: 374 SLLIDAYANAGRWESARIVLKE-----------------------------------MEV 398
           SL++ +YA  G  +   ++ K                                    ++ 
Sbjct: 577 SLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQK 636

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  + + +L+ +     + R  ++L+ +  +G++PD   +N ++D + +      
Sbjct: 637 HGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWK 696

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      + + G +PD +++NT+I    + G       +  EM   G  PC  TYN  I+
Sbjct: 697 AEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFIS 756

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
               Q  + ++  ++  M      PN +TY  + D Y ++ R+D+AI+ +  + D
Sbjct: 757 GYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 17/231 (7%)

Query: 419 GEWQRTFQVLK----EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           G W++   + +     +  +  + D H   +M+   G+ +    A   FD +  +    D
Sbjct: 162 GNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLD 221

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLL 533
              + T++  + + G+Y RA E+FE M E G  P   TYN+M+++ G+  R W+ +  LL
Sbjct: 222 VRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELL 281

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             MR++GL  +  T +T++   G+ G  D+A E   GL           +++G KP  + 
Sbjct: 282 DEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGL-----------KSEGYKPGTVT 330

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            N+L++ FG+    +EA +VL  M+EN   PD VTY  ++ A +R   FH+
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAG-FHE 380


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 244/539 (45%), Gaps = 33/539 (6%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           L+K  CS  S +  A +    L K  L +   + ++ L+H L    ++ EA  L  Q  R
Sbjct: 122 LIKCFCSC-SKLPFALSTFGKLTKLGL-HPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
              LT+  L++   R   + +A+ L+ +M ++G   D I Y   +  + +     S+L  
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL-N 238

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L K  E   I+ +  + + +I G  K G  S +       Q  G+ P   TY  +I   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             SGR   A+ + +E+ E  + P    YNAL+  +VK G   +A  +  EM   G++P+ 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ +ID +    R ++A  +   M      P+ F ++ ++ GY          ++L E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+  +T  YN +I  F     L+ A+    +M+S G+ PD +T NTL+D     G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 491 YDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
              A E+F+ MQ+            G  P   TYNI+I  L  + ++ + + L   M  +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G++P+ +TY++++D   +  R D+A +            F  M +    P+ +  N+LIN
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQ-----------MFVSMGSKSFSPNVVTFNTLIN 587

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV-------DKFHKVFSSYLF 651
            + +  R  +   +   M   G+  D + Y TL+    +V       D F ++ SS ++
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 16/339 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++ A+    R     +++++++   ++    ++  L+K +     L  A   
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             ++ + G+ PD  T++ L+       R   A  +  ++     +P+   ++ ++ G   
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTI 476
            G       +L  M  +G++PD   Y   +D   K      A+    +M     I+P+ +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            ++ +ID   K GR+  +  LF EMQ++G FP   TYN MI       RW   +RLL  M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + + PNVVTY  L++ + + G+F +A E    L D+       M   G+ P+ +  NS
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAE----LYDE-------MLPRGIIPNTITYNS 363

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +I+ F +  R   A  +   M   G  PDV T+TTL+  
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 18/353 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  +  K +EA  L      + + P  +TYN++I    + D L+ A ++   M 
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   ++ +I       +ID  +  +L  E+    +  +    N +I GF   GD
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGM--ELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES----------- 329
            + A+         G+ P   T   ++  L ++G+  +A  +F+ +++S           
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++P    YN L+ G +  G   +AE +  EM   G++PD  TYS +ID      R + A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M      PN   ++ ++ GY   G      ++  EM   G+  D   Y  +I  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           F K   ++ A+  F  M+S G+ PDTIT   ++   +     +RA  + E++Q
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 22/457 (4%)

Query: 98  ESASALASSPSSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKH 156
           +    +  + S+LN +  K+ E     P   ++ +++  LC      D ++ +   +Q  
Sbjct: 225 DGMCKMGDTVSALNLLR-KMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDK 282

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEK 211
            + +   + Y+ +I     S +   A  L Q    ++++P  +TYNALI+A  +     +
Sbjct: 283 GI-FPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A  L  +M   G   + I Y+ +I    + +++D++  + ++  +       D      +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA--EDMFYLMATKGCSPDVFTFTTL 399

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G+  A      M  L      GL   T TY  +I      G    A  + +++  SG+
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAY 380
            P     N LL G    G LKDA  +   M++S           GV PD  TY++LI   
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
            N G++  A  + +EM      P++  YS ++ G   +       Q+   M S    P+ 
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             +N +I+ + K   +   +  F  M   GI  D I + TLI    K G  + A ++F+E
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           M   G +P T T   M+     +E  E    +L +++
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 231/505 (45%), Gaps = 25/505 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L ++ K+ EA  + +    + + P   TY  ++    R   +++A  L  KM 
Sbjct: 13  YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + Y+ +I  L +   I+ +   KL +E+     E D    N ++ G  + G 
Sbjct: 73  ERGCSANTVAYNALINGLCKDENIERAY--KLLEEMASKGYEPDNITYNTILSGLCRMGK 130

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE--ELKESGLKPRTKAY 338
            S+A +F       G SP    Y  ++ AL   G+  EA  +F+  ++ +  + P    Y
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G+ ++    +A  +  ++   G +PD  TY+ ++   A     + A  + K+M  
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   PN   YS +L+G+   G   R  ++ +EM      PD    N +ID   K   +  
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A    + M   G  PD +T+N L+D   K    D+A ELF  M + G  P   +Y++++N
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  +  D + L   M  + L+P+VVT+  L+D   ++G+ D+A + L+ +S+  V  
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNV-- 428

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                     P  +   +L++    D+R  EA  + QYM E G   DV+ +  ++  L R
Sbjct: 429 ---------LPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479

Query: 639 VDKFHKVFSSYLFFNIYKMLSYSGE 663
             K  +     LFF    M+   GE
Sbjct: 480 EGKLAQAL---LFFK--SMVKSDGE 499



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 229/513 (44%), Gaps = 53/513 (10%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I++  L R+ K+ EA      ++ +      + YNALI+   +++++E+A  L+ +M 
Sbjct: 48  YTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA 107

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS---------------------LLQKLYKEIEC- 258
             GY  D I Y+ ++  L R  K+  +                     LL  LYKE +  
Sbjct: 108 SKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVA 167

Query: 259 -------------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
                         K+  D    N +I GF +     +AM+        G  P T TY +
Sbjct: 168 EAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNS 227

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L+      EAE +F+++ +SG  P    Y+ +L G+ ++G +     +  EM    
Sbjct: 228 ILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PD    + +ID    A + + A  VL+EM    A P+   Y+ +L G        +  
Sbjct: 288 FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 347

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++   M  +G  PD   Y+V+++   K N +H A   FDRM+   + PD +T+N L+D  
Sbjct: 348 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 407

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ D A++L + M E    P   T   +++ L   +R ++  RL   M  +G + +V
Sbjct: 408 CKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADV 467

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM-RTDG-LKPSNLALNSLINAFGE 603
           + +  ++           A  C EG   QA+  F+ M ++DG   P  +   +L+NA  E
Sbjct: 468 LPHNIVL-----------AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIE 516

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             R  +A    Q M  +G  PD V Y TLM  L
Sbjct: 517 AGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL 549



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 170/361 (47%), Gaps = 16/361 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P   TY+ +I+ L  +G+  EA  + EE+ E G+ P    Y  ++    + G + +A
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +  +M   G   +   Y+ LI+        E A  +L+EM     +P++  Y+ IL+G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR--MLSEGIE 472
               G+     Q    M S G  PD   YN ++D   K   +  A   F    M    + 
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+NTLID   +  + D A +LF+++  +GY P T TYN ++  L  +   ++ + +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M   G  PN  TY+ ++  + + G     +E  E ++++              P  L
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR-----------FSPDVL 293

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSY 649
             N++I+   + ++  +A  VL+ M + G  PDVVTY  L+  L +   VDK H++FS+ 
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 650 L 650
           +
Sbjct: 354 V 354



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 15/391 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI    R EK  EA      ++++      +TYN+++   AR  ++++A  +  K
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   +   YS+V+    R   +   L  +LY+E+   +   D  L N VI    KA
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCL--ELYEEMTEKRFSPDVLLCNAVIDMLCKA 305

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A + L     +G  P   TY  ++  L  +    +A  +F  + ++G  P   +Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + +L G  K   + DA  +   M    ++PD  T+++L+D    AG+ + A+ +L  M  
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425

Query: 399 SHAKPNSFIYSRILAGY-RDR--GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
            +  P+    + ++ G  RD+   E  R FQ + E    G   D   +N+++    +   
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE---KGTVADVLPHNIVLAGLCREGK 482

Query: 456 LHHAMAAFDRML-SEG-IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           L  A+  F  M+ S+G   PD +T+ TL++   + GR D+A + F++M   G  P    Y
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           N ++N L +Q R     RL   M+ +G L +
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 12/255 (4%)

Query: 123 AVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           AVP  + ++ LL  LC +N  +D A+ + S +   N C    + YS++++ L ++ K+++
Sbjct: 323 AVPDVVTYNILLDGLCKTNL-VDKAHELFSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHD 380

Query: 182 AFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A +L  R   ++L P  +T+N L+    +   L++A +L+  M +     D +  + ++ 
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMH 440

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVG 295
            L R  + D ++  +L++ +       D    N V+ G  + G  ++A+ F   M +  G
Sbjct: 441 GLCRDKRTDEAV--RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG 498

Query: 296 -LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
             SP   TY  ++ AL  +GR  +A   F+++  SG  P   AYN L+ G  K G    A
Sbjct: 499 EFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQA 558

Query: 355 EFVVSEMERSGVLPD 369
           + +   M+  G L D
Sbjct: 559 DRLTQAMKEKGFLSD 573


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 244/539 (45%), Gaps = 33/539 (6%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           L+K  CS  S +  A +    L K  L +   + ++ L+H L    ++ EA  L  Q  R
Sbjct: 122 LIKCFCSC-SKLPFALSTFGKLTKLGL-HPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
              LT+  L++   R   + +A+ L+ +M ++G   D I Y   +  + +     S+L  
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL-N 238

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L K  E   I+ +  + + +I G  K G  S +       Q  G+ P   TY  +I   
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             SGR   A+ + +E+ E  + P    YNAL+  +VK G   +A  +  EM   G++P+ 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ +ID +    R ++A  +   M      P+ F ++ ++ GY          ++L E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+  +T  YN +I  F     L+ A+    +M+S G+ PD +T NTL+D     G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 491 YDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
              A E+F+ MQ+            G  P   TYNI+I  L  + ++ + + L   M  +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G++P+ +TY++++D   +  R D+A +            F  M +    P+ +  N+LIN
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQ-----------MFVSMGSKSFSPNVVTFNTLIN 587

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV-------DKFHKVFSSYLF 651
            + +  R  +   +   M   G+  D + Y TL+    +V       D F ++ SS ++
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVY 646



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 16/339 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++ A+    R     +++++++   ++    ++  L+K +     L  A   
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             ++ + G+ PD  T++ L+       R   A  +  ++     +P+   ++ ++ G   
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTI 476
            G       +L  M  +G++PD   Y   +D   K      A+    +M     I+P+ +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            ++ +ID   K GR+  +  LF EMQ++G FP   TYN MI       RW   +RLL  M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + + PNVVTY  L++ + + G+F +A E    L D+       M   G+ P+ +  NS
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAE----LYDE-------MLPRGIIPNTITYNS 363

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +I+ F +  R   A  +   M   G  PDV T+TTL+  
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 18/353 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  +  K +EA  L      + + P  +TYN++I    + D L+ A ++   M 
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   ++ +I       +ID  +  +L  E+    +  +    N +I GF   GD
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGM--ELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES----------- 329
            + A+         G+ P   T   ++  L ++G+  +A  +F+ +++S           
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++P    YN L+ G +  G   +AE +  EM   G++PD  TYS +ID      R + A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M      PN   ++ ++ GY   G      ++  EM   G+  D   Y  +I  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           F K   ++ A+  F  M+S G+ PDTIT   ++   +     +RA  + E++Q
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/457 (23%), Positives = 192/457 (42%), Gaps = 22/457 (4%)

Query: 98  ESASALASSPSSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKH 156
           +    +  + S+LN +  K+ E     P   ++ +++  LC      D ++ +   +Q  
Sbjct: 225 DGMCKMGDTVSALNLLR-KMEEISHIKPNVVIYSAIIDGLCKDGRHSD-SHNLFIEMQDK 282

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEK 211
            + +   + Y+ +I     S +   A  L Q    ++++P  +TYNALI+A  +     +
Sbjct: 283 GI-FPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A  L  +M   G   + I Y+ +I    + +++D++  + ++  +       D      +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA--EDMFYLMATKGCSPDVFTFTTL 399

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G+  A      M  L      GL   T TY  +I      G    A  + +++  SG+
Sbjct: 400 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 459

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEHTYSLLIDAY 380
            P     N LL G    G LKDA  +   M++S           GV PD  TY++LI   
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
            N G++  A  + +EM      P++  YS ++ G   +       Q+   M S    P+ 
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             +N +I+ + K   +   +  F  M   GI  D I + TLI    K G  + A ++F+E
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQE 639

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           M   G +P T T   M+     +E  E    +L +++
Sbjct: 640 MISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 13/252 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI       DL  AL+L  +M   G   D +  + ++  L    K+  +L  +++
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL--EMF 486

Query: 254 KEIECDKIELDGQ-----------LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K ++  K++LD               N +I G    G   +A          G+ P T T
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L    R  EA  +F  +      P    +N L+ GY K G + D   +  EM 
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R G++ D   Y  LI  +   G    A  + +EM  S   P++     +L G+  + E +
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666

Query: 423 RTFQVLKEMKSS 434
           R   +L++++ S
Sbjct: 667 RAVAMLEDLQMS 678


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 275/620 (44%), Gaps = 99/620 (15%)

Query: 83  DFTPLLNFLSENSNSESAS---ALASSPSSLNRVEFKLAESYRAVPAPLWHSL------- 132
           DF PL N     +NS S S    + +  +++NR       +  +V  P  H+L       
Sbjct: 8   DFLPLFNPHPNRTNSHSNSRTLPILNETTNINR-------TLSSVSKPQTHTLDFKDTHL 60

Query: 133 LKNLCSS------NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--- 183
           LK+L  S      N S+     +V+   K ++     +L + LIH L  S+ + +A    
Sbjct: 61  LKSLSRSCKAGNFNESLYFLRHLVNKGHKPDV-----VLCTKLIHGLFTSKTIDKAIQVM 115

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +L        + YNA+I+   R + ++ A  ++ +M+  G+  D + Y+++I SL    
Sbjct: 116 HILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRG 175

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +DS+L             E   QLL +                           P   T
Sbjct: 176 MLDSAL-------------EFKNQLLKE------------------------NCKPTVVT 198

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I A    G   EA  + +E+ E  L+P    YN++++G  + GY+  A  ++S + 
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSIS 258

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  PD  TY++L+    N G+WE+   ++ +M     + N   YS +++     G+ +
Sbjct: 259 SKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVE 318

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +LK+MK  G++PD + Y+ +I    K   +  A+   D M+S+G  PD + +NT++
Sbjct: 319 EGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTIL 378

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            C  K  R D A  +FE++ E G  P  ++YN M + L           ++  M  +G+ 
Sbjct: 379 ACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVD 438

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+ +TY +L+    + G  D+AIE L  +          M +   KPS ++ N ++    
Sbjct: 439 PDGITYNSLISCLCRDGMVDEAIELLVDME---------MESSECKPSVVSYNIVLLGLC 489

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA----------------LIRVD-----K 641
           +  R ++A  VL  M + G +P+  TYT L++                 L+ +D      
Sbjct: 490 KVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHS 549

Query: 642 FHKVFSSYLFFNIYKMLSYS 661
           F +++ ++   ++Y+ L+ S
Sbjct: 550 FERLYKTFCKLDVYRQLNLS 569


>gi|297737368|emb|CBI26569.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 28/324 (8%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E+G +     YNA ++   ++G +  A  ++++ME  G      +Y+ +I+A  + GR
Sbjct: 57  ISENGEELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGR 116

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  + +EM     K +     R++  YRD G W++  ++++E++  GV  D   YN 
Sbjct: 117 TLEAEAIFREMVHLGLKLDL----RVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNS 172

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +IDTFGK   L  A+  F++M  EG++PD +TWN+LI  H K G   +A +         
Sbjct: 173 IIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALD--------- 223

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                  Y I++++ G+  R++  +  +  ++++G+ P+   +  L + Y Q        
Sbjct: 224 ----GAIYAILVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQ-------- 271

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
              +GL +Q V   ++M T+G++P+ + LN LINAFG   R  EA +V  ++K+ G+ PD
Sbjct: 272 ---QGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPD 328

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VVTY+TLMKA IR  KF KV   Y
Sbjct: 329 VVTYSTLMKACIRARKFDKVPEIY 352



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 53/300 (17%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           EL G + N  I    + GD  KAM+ L   + +G S    +Y  VI AL + GRT+EAEA
Sbjct: 63  ELSGVVYNARIRESCRVGDVDKAMKLLAQMEALGFSLSLGSYTTVIEALGSVGRTLEAEA 122

Query: 322 VFEEL-------------------------------KESGLKPRTKAYNALLKGYVKMGY 350
           +F E+                               +E G+    + YN+++  + K G 
Sbjct: 123 IFREMVHLGLKLDLRVIGVYRDNGMWKKAMEIVREIREMGVSLDKRIYNSIIDTFGKCGE 182

Query: 351 LKDAEFVVSEMERSGVLPDEHT----------------------YSLLIDAYANAGRWES 388
           L +A  V  +M+  GV PD  T                      Y++L+D Y   GR++ 
Sbjct: 183 LSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALDGAIYAILVDIYGQYGRFQG 242

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
               +  ++    +P++ ++  +   Y  +G  ++T +VL+ M++ G+EP+    N++I+
Sbjct: 243 PEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLIN 302

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            FG       A++ +  +   GI PD +T++TL+    +  ++D+  E++EEM+  G  P
Sbjct: 303 AFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTP 362



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 20/204 (9%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN++I    +  +L +AL +  KM+++G   D + ++ +IQ   +   +  +L   +Y  
Sbjct: 170 YNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALDGAIYAI 229

Query: 256 I--------------EC------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           +              EC      + I+    +   +   +A+ G   + ++ L + +  G
Sbjct: 230 LVDIYGQYGRFQGPEECISALKSEGIQPSASMFCVLANAYAQQGLCEQTVKVLQLMETEG 289

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P       +I A   +GR +EA +V+  +K++G+ P    Y+ L+K  ++        
Sbjct: 290 IEPNLIMLNMLINAFGIAGRHLEALSVYHHIKDTGISPDVVTYSTLMKACIRARKFDKVP 349

Query: 356 FVVSEMERSGVLPDEHTYSLLIDA 379
            +  EME +G  PD     +L  A
Sbjct: 350 EIYEEMESAGCTPDRKAREMLQTA 373


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 237/536 (44%), Gaps = 25/536 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
           V A +   LLK  C +  + D A  ++        C      Y+IL+ +L    K  +A 
Sbjct: 146 VDAIIASHLLKGFCEAKRT-DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQAD 204

Query: 183 ----FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
                +       +P  + YN +I    +  D+ KA +L  +M Q G   D + YS V+ 
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           +L +   +D +  +   +++    +  D    N++I G++  G   +A+R     +   +
Sbjct: 265 ALCKARAMDKA--EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P       ++ +L   G+  EA  VF+ +   G  P   +Y  +L GY   G L D   
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +   M   G+ PD +T+++LI AYAN G  + A I+  EM     KP+   Y  ++A   
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+     +   +M   GV PD + Y+ +I  F  +  L  A      +++ G+  D +
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            + ++I+   K GR   A+ +F+     G  P    YN++++      + E   R+   M
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            + G+ PNVV Y TLV+ Y + GR D      EGLS      FR M   G+KPS +  N 
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRID------EGLS-----LFREMLQKGIKPSTILYNI 611

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           +I+   E  R   A      M E+G+  +  TY+ +++ L +    ++ F   +F 
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK----NRCFDEAIFL 663



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 200/484 (41%), Gaps = 27/484 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY  L+  C R    E AL    ++ + G   D I  S +++      + D +L   
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           L++  E+ C        +L   +    K+G A   +R +    G   SP    Y  VI  
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-GTVCSPDVVAYNTVIDG 230

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G   +A  +F+E+ + G+ P    Y++++    K   +  AE  + +M   GVLPD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LI  Y++ G+W+ A  V KEM      P+    + ++      G+ +    V  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   G  PD   Y +M++ +    CL      FD ML +GI PD  T+N LI  +  CG
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A  +F EM++ G  P   TY  +I  L    + +D       M  QG++P+   Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
            L+  +   G    A E                        C  G    A N F +    
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL P  +  N L++ +    +  +A  V   M   G++P+VV Y TL+    ++ +  + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 646 FSSY 649
            S +
Sbjct: 591 LSLF 594



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G     + Y  VI +L R  K+D ++ +K  +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM-EKFNQ 456

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    + +I GF   G   KA   +      G+      + ++I  L   G
Sbjct: 457 MID-QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    YN L+ GY  +G ++ A  V   M  +G+ P+   Y 
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +Y+ I+ G  + G          EM  S
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   Y++++    K  C   A+  F  + +  ++ D IT NT+I   F+  R + A
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +   G  PC  TY+IMI  L ++   E+ + +  +M+  G  P+
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      + LLKG+ +     +A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME--VSHAKPNSFIYSRIL 412
           + ++      G +PD  +Y++L+ +  N G+   A  +L+ M    +   P+   Y+ ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   Y+ ++    K   +  A A   +M+++G+ 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD  T+N LI  +   G++  A  +F+EM+ +   P     N ++  L +  + ++ + +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +YT +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPDIY 397

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KP VVTY T++ AL R+ K       +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 237/571 (41%), Gaps = 79/571 (13%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQK----------HNLCYSYELLYSIL 169
           R +P  L  + S++  LC + + +D A A +  +            +NL Y Y       
Sbjct: 250 RGIPPDLVTYSSVVHALCKARA-MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS------ 302

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
             + G+ ++    F   +RQ + P  +  N L+ +  +   +++A ++   M   G + D
Sbjct: 303 --STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 228 FINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             +Y++++    T+   +D   +  L+  +  D I  D    N +I  +A  G   KAM 
Sbjct: 361 VFSYTIMLNGYATKGCLVD---MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +  G+ P   TY  VI AL   G+  +A   F ++ + G+ P   AY+ L++G+ 
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 347 KMGYLKDAEFVVSEMERSGVL-----------------------------------PDEH 371
             G L  A+ ++SE+  +G+                                    PD  
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y++L+D Y   G+ E A  V   M  +  +PN   Y  ++ GY   G       + +EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G++P T  YN++ID   +      A   F  M   GI  +  T++ ++   FK   +
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A  LF+E++         T N MI  + +  R E+ K L  ++   GL+P  VTY+ +
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIM 717

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +    +           EGL ++A + F  M+  G +P +  LN ++    +      A 
Sbjct: 718 ITNLLK-----------EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAG 766

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A L  + E     + +T      A++ VD F
Sbjct: 767 AYLSKIDERNFSLEHLT------AMLLVDLF 791



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 167/396 (42%), Gaps = 8/396 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
           +D A  + + ++ H +   + + Y  +I AL R  K+ +A      ++ Q        Y+
Sbjct: 412 LDKAMIIFNEMRDHGV-KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI     +  L KA  L+S++  +G   D + +  +I +L +  ++  +  Q ++    
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA--QNIFDLTV 528

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D  + N ++ G+   G   KA+R        G+ P    Y  ++      GR  
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E  ++F E+ + G+KP T  YN ++ G  + G    A+    EM  SG+  ++ TYS+++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
                   ++ A  + KE+   + K +    + ++AG       +    +   +  SG+ 
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    Y++MI    K   +  A   F  M + G EPD+   N ++    K     RA   
Sbjct: 709 PCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
             ++ ER +     T  ++++L   +    +  R L
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 212/463 (45%), Gaps = 13/463 (2%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++++ + L P T   LI+A  R +    A +L ++            ++ +I  L  + +
Sbjct: 21  MVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGE 80

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + + L  +YK++     +LD    N +I  F ++G    AM      +  G  P   TY
Sbjct: 81  FERAEL--VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++ AL  +GR  EA + F+ + E GL P    YN L+  + K+G L  A  + +EM+R
Sbjct: 139 GFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P   TY++L+DA  +AGR  +AR +  +M      P+S+ YS ++ G    G  + 
Sbjct: 199 RGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEE 258

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +V +EM   GV  D   YN ++ T  K   +         M  +G  PD  ++NT++D
Sbjct: 259 AHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMD 318

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K  + D A E+F  M E G  P   +YNI+I+           +++L  M   G +P
Sbjct: 319 ALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP 378

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              TY +L+      G+ D+A   LE            M T G +P  +  N L++  G+
Sbjct: 379 ETKTYNSLIHWLATDGQVDEAFAVLE-----------EMETAGCRPDVVTYNRLMDMLGK 427

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              +  A  + Q MK+ G++PD ++Y   +  L   D+  +  
Sbjct: 428 RGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEAL 470



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 185/412 (44%), Gaps = 24/412 (5%)

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L+ L KE+  +   L    L  +I  + +   +  A      A+    SP    +  +I 
Sbjct: 14  LETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLID 73

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L NSG    AE V+++L + G +    AYN L++ + + G L  A  +  EM+  G  P
Sbjct: 74  ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           DE+TY  L++A   AGR + AR     M      PN   Y+ ++  +R  G+      + 
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EMK  G +P    YN+++D       +  A   F +M  +G  PD+ T++TL++   K 
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR + A ++F EM +RG       YN ++  L +    + V +L+  M  +G  P+  ++
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSF 313

Query: 549 TTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRT 584
            T++D  G++ + D A E                           G + QA      M  
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            G  P     NSLI+    D +  EAFAVL+ M+  G +PDVVTY  LM  L
Sbjct: 374 AGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 209/450 (46%), Gaps = 8/450 (1%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F  AES+   P     + L ++  ++   + A  V   L +   C      Y++LI   G
Sbjct: 53  FNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG-CQLDRFAYNVLIRYFG 111

Query: 175 RSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           RS +L  A  + +  ++        TY  L++A  +   +++A +    M + G   +  
Sbjct: 112 RSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIP 171

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+L++ +  +  ++D +L   L+ E++    +      N ++     AG    A +   
Sbjct: 172 TYNLLMDAFRKVGQLDMAL--GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
              G G SP + TY+ ++  L  SGR  EA  VF E+ + G+      YN+LL    K G
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +     ++ EM R G  PD  +++ ++DA   A + ++AR V   M  S  KP+   Y+
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++  Y   G+  +  Q+L+EM  +G  P+T  YN +I        +  A A  + M + 
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  PD +T+N L+D   K G   RA  LF++M+++G  P T +Y + I+ L   +R ++ 
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             L  +M+A G   +   Y  L+    ++G
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 194/437 (44%), Gaps = 42/437 (9%)

Query: 169 LIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LI A GR  K  +AF L +Q +      T   +  LI     + + E+A  +  K+ Q G
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   Y+++I+   R+ ++DS++  ++++E++    E D      ++    KAG   +
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAM--EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQE 153

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A  F       GL+P   TY  ++ A    G+   A  +F E+K  G +P    YN LL 
Sbjct: 154 ARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLD 213

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
                G +  A  +  +M   G  PD +TYS L++    +GR E A  V +EM       
Sbjct: 214 ALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAV 273

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMK------------------------------- 432
           +   Y+ +LA     G   R ++++KEM                                
Sbjct: 274 DLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVF 333

Query: 433 ----SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
                SG +PD   YN++ID++ ++     A    + M+  G  P+T T+N+LI      
Sbjct: 334 ARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATD 393

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+ D A  + EEM+  G  P   TYN ++++LG++   +   RL   M+ +G+ P+ ++Y
Sbjct: 394 GQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSY 453

Query: 549 TTLVDIYGQSGRFDDAI 565
              +D      R D+A+
Sbjct: 454 AVRIDGLAFDDRLDEAL 470



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 168/357 (47%), Gaps = 24/357 (6%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L++ G     E + +E+   G   R      L+  Y +     DA  + ++ E   
Sbjct: 1   MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P  H ++ LID   N+G +E A +V K++     + + F Y+ ++  +   G+     
Sbjct: 61  CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAM 120

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++ +EMK  G EPD + Y  +++  GK   +  A + FD ML  G+ P+  T+N L+D  
Sbjct: 121 EMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAF 180

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ D A  LF EM+ RG+ P   TYNI+++ L    R    ++L   M   G  P+ 
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAV------------------NAFRV------ 581
            TY+TLV+  G+SGR ++A +    + D+ V                  N  RV      
Sbjct: 241 YTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           M   G  P   + N++++A G+  +   A  V   M E+G KPD+++Y  L+ +  R
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 7/342 (2%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+ A  +  +L  A   F   +R+   P  +TYN L+ A      +  A  L  KM 
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   D   YS ++  L ++ +++ +   K+++E+    + +D    N ++   AKAG+
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEA--HKVFREMVDRGVAVDLVNYNSLLATLAKAGN 290

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +  + +      G  P   ++  ++ AL  + +   A  VF  + ESG KP   +YN 
Sbjct: 291 MDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNI 350

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y + G    A  ++ EM  +G +P+  TY+ LI   A  G+ + A  VL+EME + 
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAG 410

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   Y+R++     RGE QR  ++ ++MK  GVEPDT  Y V ID     + L  A+
Sbjct: 411 CRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEAL 470

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
             F  M + G   D   +  LI    + G  +   +L  E Q
Sbjct: 471 VLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 11/298 (3%)

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L   E ++ EM   G     +T   LI AY    +   A  +  + E     P    +
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           ++++    + GE++R   V K++   G + D   YNV+I  FG+   L  AM  F  M  
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G EPD  T+  L++   K GR   A   F+ M ERG  P   TYN++++   +  + + 
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L   M+ +G  P+VVTY  L+D    +GR   A +            F  M  DG  
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKL-----------FHKMTGDGCS 237

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P +   ++L+N  G+  R  EA  V + M + G+  D+V Y +L+  L +     +V+
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D  E L +EM   G      T   +I   G   +  D   L     +    P V  +
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L+DI   SG F+           +A   ++ +   G +    A N LI  FG   +  
Sbjct: 69  TKLIDILVNSGEFE-----------RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD 117

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            A  + + MK  G +PD  TY  L+ AL +  +  +  S +
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 216/470 (45%), Gaps = 28/470 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKL 252
           +T N LI A  R   +  A+ ++ +M   G   D   ++ ++Q       I+++L ++  
Sbjct: 198 VTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAK 257

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E  C      G  +N +I G+ K G    A+ ++      G  P   TY   +  L  
Sbjct: 258 MMEAGCSPT---GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G    A  V + + + G  P    YN ++    K G L +A+ +V++M   G LPD  T
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ LI A ++  R E A  + +E+ V    P+ + ++ ++      G+     ++ +EMK
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           SSG  PD   YN++ID       L +A+   + M S G    T+T+NT+ID   K  R +
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEE+F++M  +G      T+N +I+ L + +R +D   L+  M  +GL PN +TY +++
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554

Query: 553 DIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLK 588
             Y + G    A + LE                        G +  A+   R MR  G++
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P+  A N +I +        +A  + + M E G  PD +TY  + ++L R
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCR 664



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 233/520 (44%), Gaps = 56/520 (10%)

Query: 165 LYSILIHALGRSE--KLYEAFLLSQRQ---RLTPLTYNALISACARNDDLEKALNL-MSK 218
           +Y  ++  LG +    L E  +   R+   ++  +   + + + AR    + A++L +++
Sbjct: 91  VYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQ 150

Query: 219 MRQD--GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +  D  G   D + ++ ++  L   +K+   LL+ +Y E+    I+ D   LN +I    
Sbjct: 151 LDNDTFGVQADTVVFNHLLNVLVEGSKL--KLLESVYNEMTGRGIQPDVVTLNTLIKALC 208

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +A     A+  L      G++P   T+  ++      G    A  V  ++ E+G  P   
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV 268

Query: 337 AYNALLKGYVKMGYLKDAEFVVSE-----------------------------------M 361
             N L+ GY KMG ++DA   + +                                   M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G  PD  TY+ +I+  +  G  + A+ ++ +M      P++  ++ ++     +   
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    + +E+   G+ PD + +N++I+   K    H  +  F+ M S G  PD +T+N L
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID     G+   A +L  EM+  G    T TYN +I+ L ++ R E+ + +   M AQG+
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGI 508

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             + VT+ TL+D   ++ R DDA E +E            M  +GL+P+N+  NS++  +
Sbjct: 509 SRSAVTFNTLIDGLCKAKRIDDATELIEQ-----------MVKEGLQPNNITYNSILTHY 557

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +     +A  +L+ M  NG + DVVTY TL+  L +  +
Sbjct: 558 CKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 246/585 (42%), Gaps = 55/585 (9%)

Query: 71  DDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESY------RAV 124
           D+D   +Q     F  LLN L E S                  + KL ES       R +
Sbjct: 152 DNDTFGVQADTVVFNHLLNVLVEGS------------------KLKLLESVYNEMTGRGI 193

Query: 125 PAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
              +   ++L+K LC ++  +  A  ++  +  H +    E  ++ L+      E   EA
Sbjct: 194 QPDVVTLNTLIKALCRAH-QVRTAVLMLEEMSSHGVAPD-ETTFTTLMQGF-IEEGSIEA 250

Query: 183 FLLSQRQRL------TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
            L  + + +      T +T N LI+   +   +E AL  + +   DG+  D + Y+  + 
Sbjct: 251 ALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVH 310

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L +   +  +L  K+   +  +  + D    N VI   +K G+  +A   +      G 
Sbjct: 311 GLCQNGHVSHAL--KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGC 368

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P T T+  +I ALS+  R  EA  +  EL   GL P    +N L+    K+G       
Sbjct: 369 LPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIR 428

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  EM+ SG  PDE TY++LID   + G+  +A  +L EME +    ++  Y+ I+    
Sbjct: 429 LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALC 488

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
            +   +   +V  +M + G+      +N +ID   K   +  A    ++M+ EG++P+ I
Sbjct: 489 KKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNI 548

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N+++  + K G   +A ++ E M   G+     TY  +IN L +  R +   +LL  M
Sbjct: 549 TYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGM 608

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL---- 592
           R +G+ P    Y  ++    +     DA+           N FR M   G  P  L    
Sbjct: 609 RIKGIRPTPKAYNPVIQSLFRRNNLRDAL-----------NLFREMTEVGEPPDALTYKI 657

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
              SL    G  +   EAF  L  M   G  P+  ++  L + L+
Sbjct: 658 VFRSLCRGGGPIK---EAFDFLVEMVNKGFMPEFSSFRMLAEGLL 699



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 165/377 (43%), Gaps = 15/377 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGV-GLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++    +  D   A+R L  A      +P +A Y  ++  L  +G     E +  E++  
Sbjct: 59  LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERS--GVLPDEHTYSLLIDAYANAGRW 386
           G + R     + ++ Y ++    DA + V+++++    GV  D   ++ L++      + 
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           +    V  EM     +P+    + ++       + +    +L+EM S GV PD   +  +
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTL 238

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +  F +   +  A+    +M+  G  P  +T N LI+ + K GR + A    ++    G+
Sbjct: 239 MQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGF 298

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN  ++ L +        +++  M  +G  P+V TY T+++   ++G  D+A  
Sbjct: 299 EPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA-- 356

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             +G+ +Q V+        G  P     N+LI A     R  EA  + + +   GL PDV
Sbjct: 357 --KGIVNQMVDR-------GCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407

Query: 627 VTYTTLMKALIRVDKFH 643
            T+  L+ AL +V   H
Sbjct: 408 YTFNILINALCKVGDPH 424



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 49/274 (17%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDL 209
           K + C   E+ Y+ILI  L    KL  A  LL++ +      + +TYN +I A  +   +
Sbjct: 434 KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRI 493

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQL 267
           E+A  +  +M   G     + ++ +I  L +  +ID  + L++++ KE     ++ +   
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE----GLQPNNIT 549

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N ++  + K G+  KA   L      G      TY  +I  L  +GRT  A  +   ++
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDA--------------------------------- 354
             G++P  KAYN +++   +   L+DA                                 
Sbjct: 610 IKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPI 669

Query: 355 ----EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
               +F+V EM   G +P+  ++ +L +   N G
Sbjct: 670 KEAFDFLV-EMVNKGFMPEFSSFRMLAEGLLNLG 702


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 18/471 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YSIL+  L R++++ +A+ + +   ++   P  + YN LI +      L KA+ +   
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G       Y+ +I+   +  + D++  ++L KE+      ++      VI      
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNA--ERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A+RF+G      +SP       +I+ L   G+  +A  ++ +    G    T+  
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL G  + G L +A  +  E+   G + D  +Y+ LI       + + A + L EM  
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+++ YS ++ G  +  + +   Q   + K +G+ PD + Y+VMID   K      
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               FD M+S+ ++P+T+ +N LI  + + GR   A EL E+M+ +G  P + TY  +I 
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            +    R E+ K L   MR +GL PNV  YT L+D YG+ G+    +ECL          
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL---------- 750

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            R M +  + P+ +    +I  +  D    EA  +L  M+E G+ PD +TY
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 209/475 (44%), Gaps = 43/475 (9%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
           P  + +S+L    +    I  AY V+  + K     +  ++Y+ LI +   +  L +A  
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV-IVYNNLIDSFIEAGSLNKAIE 399

Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++S+   LT  TYN LI    +N   + A  L+ +M   G++ +  +++ VI  L 
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM----RFL------- 288
                DS+L  +   E+    +   G LL  +I G  K G  SKA+    +FL       
Sbjct: 460 SHLMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517

Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                    G+ +               G G      +Y  +I+      +  EA    +
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+ + GLKP    Y+ L+ G   M  +++A     + +R+G+LPD +TYS++ID    A 
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R E  +    EM   + +PN+ +Y+ ++  Y   G      ++ ++MK  G+ P++  Y 
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I      + +  A   F+ M  EG+EP+   +  LID + K G+  + E L  EM  +
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
              P   TY +MI          +  RLL  MR +G++P+ +TY   +  Y + G
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 34/447 (7%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIE 262
           + D    AL++   +   G        ++++ SL R N+      QK  +  ++ C  + 
Sbjct: 216 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE-----FQKCCEAFDVVCKGVS 270

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  L    I  F K G   +A++     +  G++P   T+  VI  L   GR  EA   
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E++ E G++P    Y+ L+KG  +   + DA FV+ EM + G  P+   Y+ LID++  
Sbjct: 331 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390

Query: 383 AGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           AG    A I +K++ VS      S  Y+ ++ GY   G+     ++LKEM S G      
Sbjct: 391 AGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG------ 443

Query: 442 FYNVMIDTFGKYNCLHHAMAAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            +NV   +F    CL  +   FD        ML   + P      TLI    K G++ +A
Sbjct: 444 -FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL+ +   +G+   T T N +++ L E  + ++  R+   +  +G + + V+Y TL+  
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                + D+A   L+ +  +           GLKP N   + LI       +  EA    
Sbjct: 563 CCGKKKLDEAFMFLDEMVKR-----------GLKPDNYTYSILICGLFNMNKVEEAIQFW 611

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
              K NG+ PDV TY+ ++    + ++
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAER 638



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 212/494 (42%), Gaps = 34/494 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA---CARNDDLEKALNLM 216
           L++  I+A  +  K+ EA  L  +     + P  +T+N +I     C R D+   A    
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE---AFMFK 331

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            KM + G     I YS++++ LTR  +I  +    + KE+       +  + N++I  F 
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF--VLKEMTKKGFPPNVIVYNNLIDSFI 389

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +AG  +KA+    +    GLS  ++TY  +I     +G+   AE + +E+   G      
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
           ++ +++           A   V EM    + P     + LI      G+   A     + 
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + K   V     N+     +L G  + G+    F++ KE+   G   D   YN +I    
Sbjct: 510 LNKGFVVDTRTSNA-----LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 564

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
               L  A    D M+  G++PD  T++ LI   F   + + A + +++ +  G  P   
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 624

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY++MI+   + ER E+ +     M ++ + PN V Y  L+  Y +SGR   A+E  E  
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED- 683

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                     M+  G+ P++    SLI       R  EA  + + M+  GL+P+V  YT 
Sbjct: 684 ----------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 733

Query: 632 LMKALIRVDKFHKV 645
           L+    ++ +  KV
Sbjct: 734 LIDGYGKLGQMVKV 747



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 12/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T   ++T+L  +    +    F+ + + G+ P    +   +  + K G +++A
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 292

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S+ME +GV P+  T++ +ID     GR++ A +  ++M     +P    YS ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     + VLKEM   G  P+   YN +ID+F +   L+ A+   D M+S+G+   
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           + T+NTLI  + K G+ D AE L +EM   G+     ++  +I LL     ++   R +G
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + P     TTL+    + G+   A+E    L  Q +N   V+ T   + SN  L
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALE----LWFQFLNKGFVVDT---RTSNALL 525

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + L  A   D    EAF + + +   G   D V+Y TL+       K  + F
Sbjct: 526 HGLCEAGKLD----EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 42/338 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAF--- 183
           L  +L+  LC        + A+  W Q  N  +  +   S  L+H L  + KL EAF   
Sbjct: 485 LLTTLISGLCKHGKH---SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541

Query: 184 --LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             +L +   +  ++YN LIS C     L++A   + +M + G   D   YS++I  L   
Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 601

Query: 242 NKIDSSLL---------------------------------QKLYKEIECDKIELDGQLL 268
           NK++ ++                                  Q+ + E+    ++ +  + 
Sbjct: 602 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  + ++G  S A+      +  G+SP +ATY ++I  +S   R  EA+ +FEE++ 
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P    Y AL+ GY K+G +   E ++ EM    V P++ TY+++I  YA  G    
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           A  +L EM      P+S  Y   + GY  +G     F+
Sbjct: 782 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 219/480 (45%), Gaps = 23/480 (4%)

Query: 166 YSILIHALGRS-------EKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           YS L+ ALGR        + L E   L  R  +   TY   I    R   ++ A  ++  
Sbjct: 230 YSALMVALGRRRDTGTIMDLLEEMETLGLRPNI--YTYTICIRVLGRAGRIDDAYGILKT 287

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +G   D + Y+++I +L    K+D +  ++LY ++     + D      ++  F   
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKA--KELYTKMRASSHKPDLVTYITLMSKFGNY 345

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD     RF    +  G +P   TY  ++ AL  SG+  +A  + + ++  G+ P    Y
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTY 405

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G + +  L +A  + + ME  GV P  ++Y L ID Y   G  E A    ++M+ 
Sbjct: 406 NTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK 465

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+    +  L    + G  +    +  ++ + G+ PD+  YN+M+  + K   +  
Sbjct: 466 RGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDK 525

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      MLSEG EPD I  N+LID  +K GR D A ++F  +++    P   TYNI+I 
Sbjct: 526 ATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILIT 585

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            LG++ +      L G+M+  G  PN VT+  L+D   +    +DA+       D A+  
Sbjct: 586 GLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK----NDAV-------DLALKM 634

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M      P  L  N++I    ++ R   AF     MK+  L PD VT  TL+  +++
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVK 693



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 238/521 (45%), Gaps = 20/521 (3%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYEAFLLSQRQR 190
           LK++   NS++   + +VS L   N+ ++ E    +L  +   GR E +   F L Q+Q 
Sbjct: 96  LKSISDPNSALSY-FKMVSQLP--NIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQV 152

Query: 191 LT--PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           +   P TY  +  A +    + +A   + KMRQ G+  +  +Y+ +I  L +      +L
Sbjct: 153 INRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEAL 212

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             K+YK +  + ++   +  + ++V   +  D    M  L   + +GL P   TY   I 
Sbjct: 213 --KVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIR 270

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  +GR  +A  + + +++ G  P    Y  L+      G L  A+ + ++M  S   P
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY  L+  + N G  E+ +    EME     P+   Y+ ++      G+  + F +L
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M+  G+ P+ H YN +I        L  A+  F+ M S G+ P   ++   ID + K 
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  ++A + FE+M++RG  P     N  +  L E  R  + K +  ++   GL P+ VTY
Sbjct: 451 GDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTY 510

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             ++  Y ++G+ D A + L             M ++G +P  + +NSLI+   +  R  
Sbjct: 511 NMMMKCYSKAGQIDKATKLLTE-----------MLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           EA+ +   +K+  L P VVTY  L+  L +  K  K    +
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 232/510 (45%), Gaps = 21/510 (4%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
            +++LL  LC  N ++DLA  +   +   N C    L Y+ +I+ L +  +   AF    +
Sbjct: 615  FNALLDCLCK-NDAVDLALKMFCRMTIMN-CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQ 672

Query: 189  QR--LTP--LTYNALISACARNDDLEKALNL-MSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +  L+P  +T   L+    ++  +E A+ + M  + Q G       +  +++ +    +
Sbjct: 673  MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAE 732

Query: 244  IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
            I+ ++     + + C+ I  D  L+  +I    K   A  A + F    + +G  P   +
Sbjct: 733  IEEAI--SFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPES 790

Query: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
            Y  ++  L     T  A  +F E+K +G  P    YN LL  + K   + +   + +EM 
Sbjct: 791  YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEML 850

Query: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              G  P+  T++++I A   +     A  +  E+      P    Y  ++ G    G  +
Sbjct: 851  CRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSE 910

Query: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               ++ +EM     +P+   YN++I+ FGK   ++ A   F RM+ EGI PD  ++  L+
Sbjct: 911  EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970

Query: 483  DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            +C F  GR D A   FEE++  G  P T +YN+MIN LG+  R E+   L   M+ +G+ 
Sbjct: 971  ECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGIS 1030

Query: 543  PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            P + TY  L+  +G +           G+ DQA   F  ++  GL+P+    N+LI    
Sbjct: 1031 PELYTYNALILHFGNA-----------GMVDQAGKMFEELQFMGLEPNVFTYNALIRGHS 1079

Query: 603  EDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +      AF+V + M   G  P+  T+  L
Sbjct: 1080 KSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 229/527 (43%), Gaps = 56/527 (10%)

Query: 170  IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
            ++  GR ++ ++ F   +  +L P  +TYN LI+   +   L KAL+L   M++ G   +
Sbjct: 552  LYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPN 611

Query: 228  FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
             + ++ ++  L + + +D +L  K++  +       D    N +I G  K G A  A  F
Sbjct: 612  TVTFNALLDCLCKNDAVDLAL--KMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF 669

Query: 288  LGMAQGVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESGLKPRTKAYNALLK--- 343
                +   LSP   T   ++  +   GR  +A + V E + +SGL+   + +  L++   
Sbjct: 670  YHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECIL 728

Query: 344  -------------GYV-------------------KMGYLKDAEFVVSEMERS-GVLPDE 370
                         G V                   K     DA+ +  +  +S G  P  
Sbjct: 729  IEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTP 788

Query: 371  HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             +Y+ L+D        E+A  +  EM+ +   PN F Y+ +L  +         F++  E
Sbjct: 789  ESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848

Query: 431  MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
            M   G +P+   +N++I    K N ++ A+  +  ++S    P   T+  LI    K GR
Sbjct: 849  MLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGR 908

Query: 491  YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             + A ++FEEM +    P    YNI+IN  G+         L   M  +G+ P++ +YT 
Sbjct: 909  SEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTI 968

Query: 551  LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
            LV+    +GR DDA           V+ F  ++  GL P  ++ N +IN  G+ +R  EA
Sbjct: 969  LVECLFMTGRVDDA-----------VHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017

Query: 611  FAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYLFFNI 654
             ++   MK  G+ P++ TY  L+        VD+  K+F    F  +
Sbjct: 1018 LSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGL 1064


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 18/471 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YSIL+  L R++++ +A+ + +   ++   P  + YN LI +      L KA+ +   
Sbjct: 331 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 390

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G       Y+ +I+   +  + D++  ++L KE+      ++      VI      
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNA--ERLLKEMLSIGFNVNQGSFTSVICLLCSH 448

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A+RF+G      +SP       +I+ L   G+  +A  ++ +    G    T+  
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL G  + G L +A  +  E+   G + D  +Y+ LI       + + A + L EM  
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+++ YS ++ G  +  + +   Q   + K +G+ PD + Y+VMID   K      
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               FD M+S+ ++P+T+ +N LI  + + GR   A EL E+M+ +G  P + TY  +I 
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            +    R E+ K L   MR +GL PNV  YT L+D YG+ G+    +ECL          
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL---------- 737

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            R M +  + P+ +    +I  +  D    EA  +L  M+E G+ PD +TY
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 209/475 (44%), Gaps = 43/475 (9%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
           P  + +S+L    +    I  AY V+  + K     +  ++Y+ LI +   +  L +A  
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV-IVYNNLIDSFIEAGSLNKAIE 386

Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++S+   LT  TYN LI    +N   + A  L+ +M   G++ +  +++ VI  L 
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM----RFL------- 288
                DS+L  +   E+    +   G LL  +I G  K G  SKA+    +FL       
Sbjct: 447 SHLMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504

Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                    G+ +               G G      +Y  +I+      +  EA    +
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+ + GLKP    Y+ L+ G   M  +++A     + +R+G+LPD +TYS++ID    A 
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R E  +    EM   + +PN+ +Y+ ++  Y   G      ++ ++MK  G+ P++  Y 
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I      + +  A   F+ M  EG+EP+   +  LID + K G+  + E L  EM  +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
              P   TY +MI          +  RLL  MR +G++P+ +TY   +  Y + G
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 34/447 (7%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIE 262
           + D    AL++   +   G        ++++ SL R N+      QK  +  ++ C  + 
Sbjct: 203 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE-----FQKCCEAFDVVCKGVS 257

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  L    I  F K G   +A++     +  G++P   T+  VI  L   GR  EA   
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E++ E G++P    Y+ L+KG  +   + DA FV+ EM + G  P+   Y+ LID++  
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377

Query: 383 AGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           AG    A I +K++ VS      S  Y+ ++ GY   G+     ++LKEM S G      
Sbjct: 378 AGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG------ 430

Query: 442 FYNVMIDTFGKYNCLHHAMAAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            +NV   +F    CL  +   FD        ML   + P      TLI    K G++ +A
Sbjct: 431 -FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL+ +   +G+   T T N +++ L E  + ++  R+   +  +G + + V+Y TL+  
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                + D+A   L+ +  +           GLKP N   + LI       +  EA    
Sbjct: 550 CCGKKKLDEAFMFLDEMVKR-----------GLKPDNYTYSILICGLFNMNKVEEAIQFW 598

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
              K NG+ PDV TY+ ++    + ++
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAER 625



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 212/494 (42%), Gaps = 34/494 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA---CARNDDLEKALNLM 216
           L++  I+A  +  K+ EA  L  +     + P  +T+N +I     C R D+   A    
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE---AFMFK 318

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            KM + G     I YS++++ LTR  +I  +    + KE+       +  + N++I  F 
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF--VLKEMTKKGFPPNVIVYNNLIDSFI 376

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +AG  +KA+    +    GLS  ++TY  +I     +G+   AE + +E+   G      
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
           ++ +++           A   V EM    + P     + LI      G+   A     + 
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + K   V     N+     +L G  + G+    F++ KE+   G   D   YN +I    
Sbjct: 497 LNKGFVVDTRTSNA-----LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
               L  A    D M+  G++PD  T++ LI   F   + + A + +++ +  G  P   
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY++MI+   + ER E+ +     M ++ + PN V Y  L+  Y +SGR   A+E  E  
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED- 670

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                     M+  G+ P++    SLI       R  EA  + + M+  GL+P+V  YT 
Sbjct: 671 ----------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720

Query: 632 LMKALIRVDKFHKV 645
           L+    ++ +  KV
Sbjct: 721 LIDGYGKLGQMVKV 734



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 12/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T   ++T+L  +    +    F+ + + G+ P    +   +  + K G +++A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 279

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S+ME +GV P+  T++ +ID     GR++ A +  ++M     +P    YS ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     + VLKEM   G  P+   YN +ID+F +   L+ A+   D M+S+G+   
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           + T+NTLI  + K G+ D AE L +EM   G+     ++  +I LL     ++   R +G
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + P     TTL+    + G+   A+E    L  Q +N   V+ T   + SN  L
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALE----LWFQFLNKGFVVDT---RTSNALL 512

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + L  A   D    EAF + + +   G   D V+Y TL+       K  + F
Sbjct: 513 HGLCEAGKLD----EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 42/338 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAF--- 183
           L  +L+  LC        + A+  W Q  N  +  +   S  L+H L  + KL EAF   
Sbjct: 472 LLTTLISGLCKHGKH---SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528

Query: 184 --LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             +L +   +  ++YN LIS C     L++A   + +M + G   D   YS++I  L   
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588

Query: 242 NKIDSSLL---------------------------------QKLYKEIECDKIELDGQLL 268
           NK++ ++                                  Q+ + E+    ++ +  + 
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  + ++G  S A+      +  G+SP +ATY ++I  +S   R  EA+ +FEE++ 
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P    Y AL+ GY K+G +   E ++ EM    V P++ TY+++I  YA  G    
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           A  +L EM      P+S  Y   + GY  +G     F+
Sbjct: 769 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 28/479 (5%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L+  TYN  I    +N  + +A+ + + +   G   D   Y  ++  L +  + ++   +
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG--E 305

Query: 251 KLYKE-IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++  E IE   +  +  + N ++ G  K G+   A   +   +  G++P    Y A+I +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSN-LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           +   G+  EAE++F  +   GL P    Y+ L+  + K G L  A   + +M   G+   
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            + YS LI  +   G+  +A+ +  EM  +  KPN  IY+ +++GY   GE    F++  
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM   G+ P+T+ +  +I      N +  A   F  M+   + P+ +T+N LI+ H K G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
              RA EL +EM E+G  P T TY  +I+ L    R  + +  + +++ +    N + ++
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604

Query: 550 TLVDIYGQSGRFDDAIE-CLEGLSDQA-----------------------VNAFRVMRTD 585
            L+  Y + GR DDA++ C E L                           ++  + M   
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           GL+P N+   ++I+A  +      AF +   M   G  P+VVTYT L+  L ++    K
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 247/563 (43%), Gaps = 55/563 (9%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
           VP+    S L +      +I  A+ +V+ ++K  +  S   +Y+ LI+++ +  KL EA 
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL-FVYNALINSMCKDGKLDEAE 375

Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
             F     + L P  +TY+ LI +  +   L+ AL+ + KM + G       YS +I   
Sbjct: 376 SLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGH 435

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K+ ++  + L+ E+  + ++ +  +   +I G+ K G+   A R      G G+SP
Sbjct: 436 CKLGKLRAA--KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP 493

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
            T T+ A+I+ L ++ R  EA  +F E+ E  + P    YN L++G+ K G    A  ++
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL 553

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM   G++PD +TY  LI    + GR   AR  + +++    K N   +S +L GY   
Sbjct: 554 DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE 613

Query: 419 G-----------------------------------EWQRTFQVLKEMKSSGVEPDTHFY 443
           G                                   + +    +LK+M   G+ PD   Y
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLY 673

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
             MID   K   L  A   +D M+SEG  P+ +T+  LI+   K G  D+AE L  EM  
Sbjct: 674 TTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 733

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P   TY   ++ L  +   E   + L ++  +G L N VTY  L+  + + GR  +
Sbjct: 734 SNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQE 792

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A E L  + D            G+ P  ++ +++I  +       EA  + + M   G+ 
Sbjct: 793 AAEVLVNMIDS-----------GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 841

Query: 624 PDVVTYTTLMKALIRVDKFHKVF 646
           PD V Y  L+       +  K F
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAF 864



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 202/493 (40%), Gaps = 35/493 (7%)

Query: 166 YSILIHALGRS--------------------EKLYEAFLLSQRQR--LTPLTYNALISAC 203
           + ILIHAL +S                    E L+E+FL S R+    T L ++ LI   
Sbjct: 96  FCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTY 155

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +N      L ++  M   G        S V+  L R  +   +L   L+ EI    +  
Sbjct: 156 VQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMAL--HLFDEIVSSGLRP 213

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D  +   V+    +  D  +A   +G  +  G     ATY   I  L  + R  EA  + 
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK 273

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             L   GL+     Y  L+ G  K+   +  E +++EM   G +P E   S L+D     
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G   SA  ++ +++     P+ F+Y+ ++      G+      +   M   G+ P+   Y
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +++ID+F K   L  A+    +M   GI+     +++LI  H K G+   A+ LF+EM  
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P    Y  +I+   ++    +  RL   M  +G+ PN  T+T L+     + R  +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE 513

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A +            F  M    + P+ +  N LI    ++     AF +L  M E GL 
Sbjct: 514 ANK-----------LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562

Query: 624 PDVVTYTTLMKAL 636
           PD  TY  L+  L
Sbjct: 563 PDTYTYRPLISGL 575



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/468 (22%), Positives = 198/468 (42%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T + +++   R      AL+L  ++   G   D   Y+ V++SL      D    +++  
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELK--DFIRAREVIG 239

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E    +L     N  I G  K     +A+    +    GL     TY  ++  L    
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                E +  E+ E G  P   A + L+ G  K G +  A  +V+++++ GV P    Y+
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI++    G+ + A  +   M      PN   YS ++  +  RG+       L +M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++   + Y+ +I    K   L  A + FD M++ G++P+ + + +LI  + K G    A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L+ EM  +G  P T T+  +I+ L    R  +  +L G M    ++PN VTY  L++ 
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 555 YGQSGR-------FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           + + G         D+ +E                 C  G   +A      ++ +  K +
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  ++L++ + ++ R  +A    + M   G+  D+V Y+ L+  ++R
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 180/398 (45%), Gaps = 16/398 (4%)

Query: 129 WHSLLKNLCSSNSSID---LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-L 184
           + +L+  LC +N   +   L   +V W    N     E+ Y++LI    +      AF L
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPN-----EVTYNVLIEGHCKEGNTVRAFEL 552

Query: 185 LSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           L +   + L P   TY  LIS       + +A   M+ ++ +    + + +S ++    +
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCK 612

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             ++D +L     +E+    + +D    + +I G  +  D    +  L      GL P  
Sbjct: 613 EGRLDDAL--DACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y  +I A + +G    A  +++ +   G  P    Y AL+ G  K+G +  AE +  E
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  S  LP+++TY+  +D   + G  E A I L ++ +     N+  Y+ ++ G+   G 
Sbjct: 731 MLASNSLPNQNTYACFLDYLTSEGNIEKA-IQLHDVLLEGFLANTVTYNILIRGFCKLGR 789

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            Q   +VL  M  SG+ PD   Y+ +I  + +   L  A+  ++ ML+ G+ PDT+ +N 
Sbjct: 790 IQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNF 849

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           LI      G   +A EL ++M  RG  P   TYN +I+
Sbjct: 850 LIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 157/351 (44%), Gaps = 13/351 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T  +  +I     + R ++   V   + + G+ P+ +  + +L G +++   + A  +  
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDR 418
           E+  SG+ PD + Y+ ++ +      +  AR V+  ME S    +   Y+  + G  +++
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
             W+   ++   +   G+  D   Y  ++    K           + M+  G  P     
Sbjct: 265 RVWE-AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + L+D   K G    A +L  ++++ G  P    YN +IN + +  + ++ + L  NM  
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL PN VTY+ L+D + + G+ D A+  L  +++            G+K +    +SLI
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV-----------GIKATVYPYSSLI 432

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +   +  +   A ++   M  NGLKP+VV YT+L+    +  + H  F  Y
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 18/261 (6%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YS+LI+ + R +       LL Q   Q L P  + Y  +I A A+  +L+ A  L   
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDI 695

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG---- 274
           M  +G   + + Y+ +I  L +   +D +       E+ C ++     L N         
Sbjct: 696 MVSEGCLPNVVTYTALINGLCKIGLMDKA-------ELLCREMLASNSLPNQNTYACFLD 748

Query: 275 -FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                G+  KA++   +    G    T TY  +I      GR  EA  V   + +SG+ P
Sbjct: 749 YLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 807

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +Y+ ++  Y + G LK+A  +   M   GV PD   Y+ LI      G    A  + 
Sbjct: 808 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 867

Query: 394 KEMEVSHAKPNSFIYSRILAG 414
            +M     KPN   Y+ ++ G
Sbjct: 868 DDMMRRGVKPNRATYNSLIHG 888


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 219/449 (48%), Gaps = 27/449 (6%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TYNALI A  R  DL  A   +S M + G+  D   ++ +I    RT +++ +    
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVA--HD 185

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITAL 310
           L+ ++       D      +I GF +AG   +A+  F  M Q     P   T+AA++  L
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ-----PDMYTHAALVKGL 240

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            ++GR  E   + +++KE G +P T+AY AL+  + +    ++AE +++EM  SG++P  
Sbjct: 241 CDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCV 300

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T +++++AY   GR   A  V + M     +PN + Y+ I+ G+ + G+  +   +L +
Sbjct: 301 VTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQ 360

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML----SEGIEPDTITWNTLIDCHF 486
           M+  GVEPD   YN++I    +  C+   + +  R+L      G+  D  T+N LID   
Sbjct: 361 MRECGVEPDVVTYNLLI----RGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+ D A  LF+ ++ RG  P + T+N +IN L +  +++     L NM + G  P+  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTY 476

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY+  ++             C    S + +     M    +KPS +    +IN    ++ 
Sbjct: 477 TYSPFIENL-----------CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERN 525

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              A  +   M   G  PDVVTYTT ++A
Sbjct: 526 YGLATRIWGQMVSQGCSPDVVTYTTSVRA 554



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 220/504 (43%), Gaps = 57/504 (11%)

Query: 166 YSILIHALGRSEKL-----YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R   L     Y + ++    R    T+N+LI    R   LE A +L  KM 
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMP 191

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D ++Y+ +I+      +ID +L  +L++E+    +     L+     G   AG 
Sbjct: 192 FRGFSQDAVSYAALIEGFCEAGRIDEAL--ELFREMTQPDMYTHAALVK----GLCDAGR 245

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             + +  L   + +G  P T  YAA++       +  EAE +  E+ +SGL P       
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI 305

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y + G +  A  V   M   G  P+  TY+ ++  + NAG+   A  +L +M    
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   Y+ ++ G    G     F++L+ M+ +G+  D + YNV+ID   K   +  A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN------ 514
           + FD +   GI P+++T+NT+I+   K G++D A    E M   GY P T TY+      
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485

Query: 515 -----------------------------IMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                                        I+IN L  +  +    R+ G M +QG  P+V
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDV 545

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTYTT V  Y   GR D+A        +  V   +  RT       +A N+LI+      
Sbjct: 546 VTYTTSVRAYCNEGRLDEA--------ENVVTEMKKCRT---IVDAMAYNTLIDGHTSIG 594

Query: 606 RDAEAFAVLQYMKENGLKPDVVTY 629
           +   A  +L++M      P+  T+
Sbjct: 595 QTDRAVTILKHMTGVASMPNHFTF 618



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/529 (20%), Positives = 227/529 (42%), Gaps = 55/529 (10%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           Y+ LI     + ++ EA  L  +  +    T+ AL+         E+ L ++ KM++ G+
Sbjct: 202 YAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGW 261

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV------GFAKA 278
                 Y+ ++    R  K + +  +K+  E+       D  L+  V+        + + 
Sbjct: 262 RPTTRAYAALVDLWCREQKAEEA--EKILNEM------FDSGLMPCVVTCTIVVNAYCRE 313

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A+R     +  G  P   TY A++    N+G+  +A A+ ++++E G++P    Y
Sbjct: 314 GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L++G    G++  A  ++  ME +G+  D++TY++LIDA    G+ + A  +   +E 
Sbjct: 374 NLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +PNS  ++ ++ G    G++      L+ M S+G  PDT+ Y+  I+   K      
Sbjct: 434 RGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQE 493

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +   D ML + ++P T+ +  +I+  F    Y  A  ++ +M  +G  P   TY   + 
Sbjct: 494 GLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVR 553

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA--- 575
               + R ++ + ++  M+    + + + Y TL+D +   G+ D A+  L+ ++  A   
Sbjct: 554 AYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMP 613

Query: 576 -------------------------------------VNAFRVMRTDGLKPSNLALNSLI 598
                                                   F +M+ + +  S     S++
Sbjct: 614 NHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSIL 673

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             F E++R  E  +++  MKE  L  +   Y  L+    ++  +   ++
Sbjct: 674 EGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 15/356 (4%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           F  M +    +P  ATY A+I AL        A+     +  SG +P    +N+L+ GY 
Sbjct: 116 FAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYC 175

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           +   L+ A  +  +M   G   D  +Y+ LI+ +  AGR + A  + +EM     +P+ +
Sbjct: 176 RTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMY 231

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ ++ G  D G  +    +L++MK  G  P T  Y  ++D + +      A    + M
Sbjct: 232 THAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G+ P  +T   +++ + + GR   A  +FE M+ +G  P   TYN ++       + 
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKV 351

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
                LL  MR  G+ P+VVTY  L  I GQ         C++G    A    R+M  +G
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLL--IRGQ---------CIDGHIGSAFRLLRLMEGNG 400

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           L       N LI+A  +  +  EA ++   ++  G++P+ VT+ T++  L +  KF
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 34/492 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++     + K+Y+A  L  + R   + P  +TYN LI     +  +  A  L+  M 
Sbjct: 338 YNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLME 397

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D   Y+++I +L +T K+D +    L+  +E   I  +    N VI G  KAG 
Sbjct: 398 GNGLAADQYTYNVLIDALCKTGKVDEAC--SLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A  FL      G +P T TY+  I  L  +  + E     +E+ +  +KP T  Y  
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++           A  +  +M   G  PD  TY+  + AY N GR + A  V+ EM+   
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA- 459
              ++  Y+ ++ G+   G+  R   +LK M      P+   + +++    +     H  
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP 635

Query: 460 ---------------MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
                             F+ M    +     T+ ++++   +  R D    L   M+E 
Sbjct: 636 LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEE 695

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
                   YN ++N   +   + D   LL +M   G LPN++ Y  L+   G +      
Sbjct: 696 NLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLS--GLTA----- 748

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
               EG +D+A   FR  R        +    +I+ F           ++  +++   KP
Sbjct: 749 ----EGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKP 804

Query: 625 DVVTYTTLMKAL 636
              TY  L + L
Sbjct: 805 SDETYAMLTEEL 816



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/327 (19%), Positives = 131/327 (40%), Gaps = 22/327 (6%)

Query: 160 YSYELLYSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           Y+Y      L    G  E L+    +L +  + + + Y  +I+      +   A  +  +
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D + Y+  +++     ++D +  + +  E++  +  +D    N +I G    
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEA--ENVVTEMKKCRTIVDAMAYNTLIDGHTSI 593

Query: 279 GDASKAMRFLGMAQGVGLSPKTATY-------------AAVITALSNSGRTIEAEAVFEE 325
           G   +A+  L    GV   P   T+               V    ++  +TIE   VFE 
Sbjct: 594 GQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFEL 653

Query: 326 ---LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
              +K++ +    + Y ++L+G+ +   L +   +VS M+   +  +E  Y+ L++ +  
Sbjct: 654 FELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCK 713

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
              +  A  +L  M      PN   Y  +L+G    G+  R  ++ +  +      D   
Sbjct: 714 LRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIV 773

Query: 443 YNVMIDTF---GKYNCLHHAMAAFDRM 466
           + V+ID F   G  +  H  ++  ++M
Sbjct: 774 WKVIIDGFIRKGHADMCHDMISMLEQM 800


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 215/453 (47%), Gaps = 13/453 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI A  R  D++ A+ L+  M   G     + ++ V++ L +  + D +  ++++
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA--KEVF 250

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++   +  D +  N +I GF + G+  +AM+F    Q  G++P   +++ +I   S  
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   A A   E+K  GL P    Y  ++ G+ + G + +A  V  EM   G LPD  TY
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L++      R   A  +L EM+     P+   ++ ++ GY   G +++  Q+   +  
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + PD   YN +ID   +   L  A   +D M +  I P+ +T++ LID H + G+ + 
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A    +EM  +G  P   TYN +I         +  ++ L  M    +LP+++T+ TL+ 
Sbjct: 491 AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH 550

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y +        E + G    A N F +M  + ++P  +  N +IN F E     EA  V
Sbjct: 551 GYIKE-------ENMHG----AFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRV 599

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + M  +G++PD  TY +L+   +      + F
Sbjct: 600 FKKMGASGIEPDRYTYMSLINGHVTAGNSKEAF 632



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 208/437 (47%), Gaps = 27/437 (6%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLY-KEIECDKI-----ELDGQLL-------NDVIVGFAK 277
           Y LV+ S +  N    +++   Y K +E DK      E++ + +       N +I    +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGD   A+  +      GL P   T+ +V+  L    R  +A+ VF  + +  + P  ++
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+ G+ ++G +++A     EM++ GV PD  ++S LI  ++  G+ + A   L+EM+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+  IY+ ++ G+   G      +V  EM   G  PD   YN +++   K + L 
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    + M   G+ PD  T+ TLI  + + G +++A +LF+ +  +   P    YN +I
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + +  +        L  +M A+ + PN VTY+ L+D + + G+ ++A     G  D+ V 
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF----GFLDEMV- 499

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                 + G  P+ +  NS+I  +       +    LQ M ++ + PD++T+ TL+   I
Sbjct: 500 ------SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553

Query: 638 RVDKFHKVFSSYLFFNI 654
           + +  H  F+    FNI
Sbjct: 554 KEENMHGAFN---VFNI 567



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 203/446 (45%), Gaps = 6/446 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYEA 182
           P  + H++L +       +D A A+V  +    L        S+L  +    R +K  E 
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F    +  + P   ++N LI    R  ++E+A+    +M+Q G   D +++S +I   + 
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             K+D +      +E++   +  DG +   VI GF +AG  S+A+R      G+G  P  
Sbjct: 310 RGKMDHA--AAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  ++  L    R ++AE +  E+KE G+ P    +  L+ GY + G  + A  +   
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           +    + PD   Y+ LID     G    A  +  +M      PN   YS ++  + ++G+
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +  F  L EM S G  P+   YN +I  + +   +        +M+ + I PD IT+NT
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI  + K      A  +F  M++    P   TYN++IN   EQ   E+  R+   M A G
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIE 566
           + P+  TY +L++ +  +G   +A +
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKEAFQ 633



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 12/367 (3%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           +K  +     P  +  S L  L S+   +D A A +  ++   L     ++Y+++I    
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD-GVIYTMVIGGFC 343

Query: 175 RSEKLYEAFLLSQRQRLTPL-------TYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           R+  + EA  L  R  +  L       TYN L++   +   L  A  L+++M++ G   D
Sbjct: 344 RAGSMSEA--LRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
              ++ +I    R    + +L  +L+  +   ++  D    N +I G  + GD +KA   
Sbjct: 402 LCTFTTLIHGYCRDGNFEKAL--QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                   + P   TY+ +I +    G+  EA    +E+   G  P    YN+++KGY +
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCR 519

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G +K  +  + +M +  +LPD  T++ LI  Y        A  V   ME    +P++  
Sbjct: 520 SGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVT 579

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ I+ G+ ++G  +   +V K+M +SG+EPD + Y  +I+          A    D M+
Sbjct: 580 YNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639

Query: 468 SEGIEPD 474
             G  PD
Sbjct: 640 HRGFAPD 646



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 7/289 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKAL 213
           C    + Y+ L++ L +  +L +A   L   ++R +TP   T+  LI    R+ + EKAL
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L   +       D + Y+ +I  + R  K D +   +L+ ++   +I  +    + +I 
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCR--KGDLAKANELWDDMHAREIFPNHVTYSILID 480

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
              + G   +A  FL      G  P   TY ++I     SG   + +   +++ +  + P
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N L+ GY+K   +  A  V + ME+  V PD  TY+++I+ ++  G  E A  V 
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           K+M  S  +P+ + Y  ++ G+   G  +  FQ+  EM   G  PD  F
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 174/401 (43%), Gaps = 49/401 (12%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEA---------------VFEELKESGLKPRTKA 337
           G G  P TA  AA  T  + +GR  E ++               +   L  S   P+ + 
Sbjct: 30  GTGARPSTAALAAAATDAAAAGRASECQSLLLRMSRRRGASRREIVSSLLASSPTPQPQV 89

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-----ESARIV 392
           ++ L++ Y +    ++A F    +     +P   + S  + A  +   W     E+ R+V
Sbjct: 90  FDLLIRTYTQSRKPREA-FEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLV 148

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L     S ++ N++  + ++  Y    E+ +   V+ EM+   V PD   +NV+ID   +
Sbjct: 149 LS----SDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A+A  D M ++G++P  +T+N+++    K  R+D+A+E+F  M +    P   +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------ 566
           +NI+I         E+  +    M+ +G+ P+VV+++ L+ ++   G+ D A        
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 567 ------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                             C  G   +A+     M   G  P  +  N+L+N   +  R  
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +A  +L  MKE G+ PD+ T+TTL+    R   F K    +
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 18/471 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YSIL+  L R++++ +A+ + +   ++   P  + YN LI +      L KA+ +   
Sbjct: 320 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 379

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G       Y+ +I+   +  + D++  ++L KE+      ++      VI      
Sbjct: 380 MVSKGLSLTSSTYNTLIKGYCKNGQADNA--ERLLKEMLSIGFNVNQGSFTSVICLLCSH 437

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A+RF+G      +SP       +I+ L   G+  +A  ++ +    G    T+  
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 497

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL G  + G L +A  +  E+   G + D  +Y+ LI       + + A + L EM  
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+++ YS ++ G  +  + +   Q   + K +G+ PD + Y+VMID   K      
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 617

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               FD M+S+ ++P+T+ +N LI  + + GR   A EL E+M+ +G  P + TY  +I 
Sbjct: 618 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 677

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            +    R E+ K L   MR +GL PNV  YT L+D YG+ G+    +ECL          
Sbjct: 678 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL---------- 726

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            R M +  + P+ +    +I  +  D    EA  +L  M+E G+ PD +TY
Sbjct: 727 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 209/475 (44%), Gaps = 43/475 (9%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
           P  + +S+L    +    I  AY V+  + K     +  ++Y+ LI +   +  L +A  
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV-IVYNNLIDSFIEAGSLNKAIE 375

Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++S+   LT  TYN LI    +N   + A  L+ +M   G++ +  +++ VI  L 
Sbjct: 376 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 435

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM----RFL------- 288
                DS+L  +   E+    +   G LL  +I G  K G  SKA+    +FL       
Sbjct: 436 SHLMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 493

Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                    G+ +               G G      +Y  +I+      +  EA    +
Sbjct: 494 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 553

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+ + GLKP    Y+ L+ G   M  +++A     + +R+G+LPD +TYS++ID    A 
Sbjct: 554 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 613

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R E  +    EM   + +PN+ +Y+ ++  Y   G      ++ ++MK  G+ P++  Y 
Sbjct: 614 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 673

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I      + +  A   F+ M  EG+EP+   +  LID + K G+  + E L  EM  +
Sbjct: 674 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 733

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
              P   TY +MI          +  RLL  MR +G++P+ +TY   +  Y + G
Sbjct: 734 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 788



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 34/447 (7%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIE 262
           + D    AL++   +   G        ++++ SL R N+      QK  +  ++ C  + 
Sbjct: 192 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE-----FQKCCEAFDVVCKGVS 246

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  L    I  F K G   +A++     +  G++P   T+  VI  L   GR  EA   
Sbjct: 247 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 306

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E++ E G++P    Y+ L+KG  +   + DA FV+ EM + G  P+   Y+ LID++  
Sbjct: 307 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 366

Query: 383 AGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           AG    A I +K++ VS      S  Y+ ++ GY   G+     ++LKEM S G      
Sbjct: 367 AGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG------ 419

Query: 442 FYNVMIDTFGKYNCLHHAMAAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            +NV   +F    CL  +   FD        ML   + P      TLI    K G++ +A
Sbjct: 420 -FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 478

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL+ +   +G+   T T N +++ L E  + ++  R+   +  +G + + V+Y TL+  
Sbjct: 479 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                + D+A   L+ +  +           GLKP N   + LI       +  EA    
Sbjct: 539 CCGKKKLDEAFMFLDEMVKR-----------GLKPDNYTYSILICGLFNMNKVEEAIQFW 587

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
              K NG+ PDV TY+ ++    + ++
Sbjct: 588 DDCKRNGMLPDVYTYSVMIDGCCKAER 614



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 212/494 (42%), Gaps = 34/494 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA---CARNDDLEKALNLM 216
           L++  I+A  +  K+ EA  L  +     + P  +T+N +I     C R D+   A    
Sbjct: 251 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE---AFMFK 307

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            KM + G     I YS++++ LTR  +I  +    + KE+       +  + N++I  F 
Sbjct: 308 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF--VLKEMTKKGFPPNVIVYNNLIDSFI 365

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +AG  +KA+    +    GLS  ++TY  +I     +G+   AE + +E+   G      
Sbjct: 366 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 425

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
           ++ +++           A   V EM    + P     + LI      G+   A     + 
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + K   V     N+     +L G  + G+    F++ KE+   G   D   YN +I    
Sbjct: 486 LNKGFVVDTRTSNA-----LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 540

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
               L  A    D M+  G++PD  T++ LI   F   + + A + +++ +  G  P   
Sbjct: 541 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 600

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY++MI+   + ER E+ +     M ++ + PN V Y  L+  Y +SGR   A+E  E  
Sbjct: 601 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED- 659

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                     M+  G+ P++    SLI       R  EA  + + M+  GL+P+V  YT 
Sbjct: 660 ----------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 709

Query: 632 LMKALIRVDKFHKV 645
           L+    ++ +  KV
Sbjct: 710 LIDGYGKLGQMVKV 723



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 12/352 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T   ++T+L  +    +    F+ + + G+ P    +   +  + K G +++A
Sbjct: 210 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 268

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S+ME +GV P+  T++ +ID     GR++ A +  ++M     +P    YS ++ G
Sbjct: 269 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 328

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     + VLKEM   G  P+   YN +ID+F +   L+ A+   D M+S+G+   
Sbjct: 329 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 388

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           + T+NTLI  + K G+ D AE L +EM   G+     ++  +I LL     ++   R +G
Sbjct: 389 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 448

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + P     TTL+    + G+   A+E    L  Q +N   V+ T   + SN  L
Sbjct: 449 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALE----LWFQFLNKGFVVDT---RTSNALL 501

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + L  A   D    EAF + + +   G   D V+Y TL+       K  + F
Sbjct: 502 HGLCEAGKLD----EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 549



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 42/338 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAF--- 183
           L  +L+  LC        + A+  W Q  N  +  +   S  L+H L  + KL EAF   
Sbjct: 461 LLTTLISGLCKHGKH---SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 517

Query: 184 --LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             +L +   +  ++YN LIS C     L++A   + +M + G   D   YS++I  L   
Sbjct: 518 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 577

Query: 242 NKIDSSLL---------------------------------QKLYKEIECDKIELDGQLL 268
           NK++ ++                                  Q+ + E+    ++ +  + 
Sbjct: 578 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 637

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  + ++G  S A+      +  G+SP +ATY ++I  +S   R  EA+ +FEE++ 
Sbjct: 638 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 697

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P    Y AL+ GY K+G +   E ++ EM    V P++ TY+++I  YA  G    
Sbjct: 698 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 757

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           A  +L EM      P+S  Y   + GY  +G     F+
Sbjct: 758 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 257/554 (46%), Gaps = 28/554 (5%)

Query: 101 SALASSPSSLNR--VEFKLAESYRAVPAPLWH---SLLKNLCSSNSSIDLAYAVVSWLQK 155
           S L S+ + +N+  V   L E  + +  P  H   S+L N     S + LA AV+  + K
Sbjct: 85  SKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144

Query: 156 HNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
             L Y   ++  S L++    S+++ EA  L  +  +T      +T+N LI     ++  
Sbjct: 145 --LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            +A+ L+ +M   G   D + Y +V+  L +    D + +  L  ++E  K+E    +  
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI--LLNKMEQGKLEPGVLIYT 260

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K      A+      +  G+ P   TY+++I+ L N GR  +A  +  ++ E 
Sbjct: 261 TIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            + P    ++AL+  +VK G L +AE +  EM +  + P   TYS LI+ +    R + A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           + + + M   H  P+   YS ++ G+          ++ +EM   G+  +T  Y  +I  
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +      A   F  M+S+G+ P+ +T+NTL+D   K G+ ++A  +FE +Q     P 
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNIMI  + +  + ED   L  N+  +G+ P+VV Y T++  +           C +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF-----------CRK 549

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  ++A   F+ M+ DG  P++   N+LI A   D     +  +++ M+  G   D  T 
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609

Query: 630 TTLMKAL--IRVDK 641
             +   L   R+DK
Sbjct: 610 GLVTNMLHDGRLDK 623



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 220/460 (47%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + ++ L+SA A+ +  +  ++L  +M+  G   +   YS++I    R ++
Sbjct: 72  MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQ 131

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +L  L K+ K      I     LLN    G+  +   S+A+  +      G  P T 
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLN----GYCHSKRISEAVALVDQMFVTGYQPNTV 187

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + +   G +P    Y  ++ G  K G    A  ++++M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+  + P    Y+ +ID        + A  + KEME    +PN   YS +++   + G W
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++L +M    + PD   ++ +ID F K   L  A   +D M+   I+P  +T+++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+      R D A+++FE M  +  FP   +Y+ +I    + +R ++   L   M  +GL
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGL 427

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + N VTYTTL+    Q+G      +C     D A   F+ M +DG+ P+ +  N+L++  
Sbjct: 428 VGNTVTYTTLIQGLFQAG------DC-----DMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            ++ +  +A  V +Y++ + ++P + TY  +++ + +  K
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 206/449 (45%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A+ L  +M +       I +S ++ ++ + NK D  ++  L ++++   +  +    
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQNLGMPHNHYTY 119

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           + +I  F +      A+  LG    +G  P   T ++++    +S R  EA A+ +++  
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G +P T  +N L+ G        +A  ++  M   G  PD  TY ++++     G  + 
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A I+L +ME    +P   IY+ I+ G            + KEM++ G+ P+   Y+ +I 
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I PD  T++ LID   K G+   AE+L++EM +R   P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ +IN     +R ++ K++   M ++   P+VV+Y+TL+  + ++ R D+ +E  
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME-- 417

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +   +LI    +      A  + + M  +G+ P+++T
Sbjct: 418 ---------LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y TL+  L +  K  K    + +    KM
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 262/616 (42%), Gaps = 79/616 (12%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y +T L+N          A   A +     R+ F++ E   +     ++ ++  LC +  
Sbjct: 237 YTYTHLIN----------AHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA-G 285

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTY 196
            +D A+ +   + K  L       YSILI   G+ ++  EA L+ +    + L P  + Y
Sbjct: 286 EVDEAFELKKLMDKKGLVADV-FTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            ALI    R  D  +A  +  +M   G   +   Y+ +++ + +   ++ +    L  E+
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA--DALLNEM 402

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               I+ D Q  N++I G+ K  + S+    L   +   L P   T   +I  L   G  
Sbjct: 403 IMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSI 462

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A  VFE +   G+KP    Y  L+KG+V+ G  ++A  ++  M++ GV PD   Y+ +
Sbjct: 463 EDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSV 522

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I     + + E A+  L EM     KPN + Y  ++ GY   GE Q   +  KEM   G+
Sbjct: 523 IIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGI 582

Query: 437 EPDTHFYNVMIDTFGK-------------------------YNCLHH----------AMA 461
            P+      +ID + K                         Y+ L H          AM 
Sbjct: 583 APNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAME 642

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
                L +G+ PD  T+N++I    K G   +A +L E M ++G  P   TYN +IN L 
Sbjct: 643 LLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLC 702

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------- 568
           +    E  + L   +  +GL  N VTY T++D Y +SG    A                 
Sbjct: 703 KAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF 762

Query: 569 -----------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                      EG +++A++ F      G   S  +LN+L++ F +  +  EA  +L+ M
Sbjct: 763 VYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDM 821

Query: 618 KENGLKPDVVTYTTLM 633
            +  +KPD VTYT L+
Sbjct: 822 VDKHVKPDHVTYTILI 837



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 211/451 (46%), Gaps = 13/451 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN +I    R  ++++A  L   M + G   D   YS++I    +  +   + L  + 
Sbjct: 272 VTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKL--ML 329

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    ++        +I GF + GD+ +A R        G+     TY A++  +   
Sbjct: 330 EEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKF 389

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   +A+A+  E+   G+KP T+ YN +++GY+K       + ++SEM++S ++P  +T 
Sbjct: 390 GDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTC 449

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
            ++I+     G  E A  V + M     KPN+ IY+ ++ G+   G +Q   ++LK M  
Sbjct: 450 GMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV+PD   YN +I    K   +  A      M+  G++P+  T+  LI  + K G    
Sbjct: 510 KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQV 569

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+  F+EM   G  P       +I+   ++    +   +   M  + + P+V TY+ L+ 
Sbjct: 570 ADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++G+   A+E L    ++           GL P     NS+I+ F +     +AF +
Sbjct: 630 GLLRNGKLQGAMELLSEFLEK-----------GLVPDVFTYNSIISGFCKQGGIGKAFQL 678

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +YM + G+ P+++TY  L+  L +  +  +
Sbjct: 679 HEYMCQKGISPNIITYNALINGLCKAGEIER 709



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 221/485 (45%), Gaps = 18/485 (3%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           +++ +LI    +     EA   FL ++R       L  N L+S   + + LE      + 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +     D   Y+ +I +  R         ++L  E+E           N VI G  +A
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEG--KRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+  +A     +    GL     TY+ +I       R  EA+ + EE+   GLKP   AY
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            AL+ G+++ G   +A  V  EM   GV  +  TY+ L+      G  E A  +L EM +
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP++  Y+ ++ GY       R   +L EMK S + P  +   ++I+   ++  +  
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+S G++P+ + + TLI  H + GR+  A  + + M ++G  P    YN +I 
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  + E+ K  L  M  +GL PNV TY  L+  Y +SG           ++D+    
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ--------VADR---Y 573

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M   G+ P+++   +LI+ + ++    EA ++ + M    + PDV TY+ L+  L+R
Sbjct: 574 FKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLR 633

Query: 639 VDKFH 643
             K  
Sbjct: 634 NGKLQ 638



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 210/449 (46%), Gaps = 55/449 (12%)

Query: 166  YSILIHALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            YS LIH L R+ KL  A  LLS+   + L P   TYN++IS   +   + KA  L   M 
Sbjct: 624  YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            Q G   + I Y+ +I  L +  +I+ +  ++L+  I    +  +      +I G+ K+G+
Sbjct: 684  QKGISPNIITYNALINGLCKAGEIERA--RELFDGIPGKGLAHNAVTYATIIDGYCKSGN 741

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             SKA R        G+ P +  Y+A+I      G T +A ++F E  + G    T + NA
Sbjct: 742  LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNA 800

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L+ G+ K G + +A  ++ +M    V PD  TY++LID +   G  + A     +M+  +
Sbjct: 801  LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN 860

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              PN+  Y+ +L+GY   G     F                                   
Sbjct: 861  LMPNALTYTALLSGYNMAGRRSEMF----------------------------------- 885

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            A FD M+++ IEPD +TW+ +ID H K G + +  +L ++M ++G        +++I+ L
Sbjct: 886  ALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPL 945

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +E   +V ++L  +  QGL  ++ T +TLV  + ++G+ D A   L+ +       F+
Sbjct: 946  CRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMV-----RFK 1000

Query: 581  VMRTDGLKPSNLALNSLINAFGEDQRDAE 609
             +      P +  LN LIN   +D  D+E
Sbjct: 1001 WV------PDSTELNDLINV-EQDSTDSE 1022



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/571 (23%), Positives = 229/571 (40%), Gaps = 100/571 (17%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R     EAF     +L++  +L   TYNAL+    +  D+EKA  L+++M 
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMI 403

Query: 221 QDGYHCDFINYS-----------------------------------LVIQSLTRTNKID 245
             G   D   Y+                                   ++I  L R   I+
Sbjct: 404 MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIE 463

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +   ++++ +    ++ +  +   +I G  + G   +A+R L +    G+ P    Y +
Sbjct: 464 DA--SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           VI  L  S +  EA+    E+ E GLKP    Y AL+ GY K G ++ A+    EM   G
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG 581

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P++   + LID Y   G    A  + + M      P+   YS ++ G    G+ Q   
Sbjct: 582 IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L E    G+ PD   YN +I  F K   +  A    + M  +GI P+ IT+N LI+  
Sbjct: 642 ELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  +RA ELF+ +  +G      TY  +I+   +        RL   M  +G+ P+ 
Sbjct: 702 CKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDS 761

Query: 546 VTYTTLVDI----------------------------------YGQSGRFDDAIECLEGL 571
             Y+ L+D                                   + +SG+  +A + LE +
Sbjct: 762 FVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDM 821

Query: 572 SDQAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRD 607
            D+ V                          F  M+   L P+ L   +L++ +    R 
Sbjct: 822 VDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRR 881

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +E FA+   M    ++PD VT++ ++ A ++
Sbjct: 882 SEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 24/370 (6%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +   +  +I      G   EA + F   K +G        N LL   +K   L+      
Sbjct: 165 RGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFY 224

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           + M  + VL D +TY+ LI+A+  AG  +  + +L EME     P+   Y+ ++ G    
Sbjct: 225 NGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRA 284

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           GE    F++ K M   G+  D   Y+++ID FGK      A    + M S+G++P  + +
Sbjct: 285 GEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAY 344

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
             LID   + G    A  + EEM  RG      TYN ++  + +    E    LL  M  
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 539 QGLLPNVVTYTTLVDIY---GQSGRFDDAIE---------------------CLEGLSDQ 574
            G+ P+  TY  +++ Y     + R  D +                      C  G  + 
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   F +M + G+KP+ +   +LI    ++ R  EA  +L+ M + G++PDV+ Y +++ 
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 635 ALIRVDKFHK 644
            L +  K  +
Sbjct: 525 GLCKSRKMEE 534


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 241/533 (45%), Gaps = 31/533 (5%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLT 195
           S +     V S +  +  C S  L++ +L+    ++ KL E       L S+   ++   
Sbjct: 266 SGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 325

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
            N+L+    +   ++ A  +  ++ + G   +    +++I +L +  KI+++  +    +
Sbjct: 326 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT--KSFLSD 383

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   +  D    N +I  + + G   +A   +    G GL P   TY A+I  L  +G+
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A+ V +E+ + G+ P T  YN LL    +   + DAE +  EM   GV+PD  ++S 
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI   +  G  + A    ++M+ +   P++ IY+ ++ G+   G      +V  EM   G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              D   YN +++   K   L  A   F  M   G+ PD  T+ TLI+ + K G  ++A 
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            LFE M +R   P   TYN +I+   +    E V  L  +M ++ + PN ++Y  L++ Y
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683

Query: 556 GQSG-------RFDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
              G        +D+ +E                 C  G + +A      M   G+ P  
Sbjct: 684 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 743

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  N+LIN F +++    AFA++  M+ +GL PDV+TY  ++    R  +  +
Sbjct: 744 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 796



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 215/466 (46%), Gaps = 20/466 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  R   L EAF L      + L P   TYNA+I+   +     +A  ++ +M 
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 455

Query: 221 QDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + G   D   Y++++    R  N +D+   ++++ E+    +  D    + +I   +K G
Sbjct: 456 KIGMSPDTATYNILLVECCRNDNMMDA---ERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+++    +  GL+P    Y  +I     +G   EA  V +E+ E G       YN
Sbjct: 513 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYN 572

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +L G  K   L +A+ + +EM   GV PD +T++ LI+ Y   G    A  + + M   
Sbjct: 573 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           + KP+   Y+ ++ G+    E ++  ++  +M S  + P+   Y ++I+ +    C+  A
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 692

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +D M+ +G E   IT NT++  + + G   +A+E    M  +G  P   TYN +IN 
Sbjct: 693 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 752

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             ++E  +    L+  M   GLLP+V+TY  +++ + + GR  +A   +  + ++ VN  
Sbjct: 753 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN-- 810

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                    P      SLIN         EAF V   M + G  PD
Sbjct: 811 ---------PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 221/529 (41%), Gaps = 50/529 (9%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-------------LT-------PLTYNALISAC 203
           +S +IH L RS +L   +A +L   ++             LT       PL ++ L+   
Sbjct: 239 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 298

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +   L +       ++  G        + ++  L +   +D  L  ++Y+E+    +++
Sbjct: 299 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD--LAWEIYQEVVRSGVQV 356

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +   LN +I    K         FL   +  G+ P   TY  +I A    G   EA  + 
Sbjct: 357 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 416

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS-LLIDAYAN 382
           + +   GLKP    YNA++ G  K G    A+ V+ EM + G+ PD  TY+ LL++   N
Sbjct: 417 DSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN 476

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
               ++ RI   EM      P+   +S ++      G   +  +  ++MK++G+ PD   
Sbjct: 477 DNMMDAERI-FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 535

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y ++I  F +   +  A+   D ML +G   D +T+NT+++   K      A+ELF EM 
Sbjct: 536 YTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMT 595

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           ERG FP   T+  +IN   +         L   M  + L P+VVTY TL+D + +    +
Sbjct: 596 ERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 655

Query: 563 DAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
              E                        C  G   +A   +  M   G + + +  N+++
Sbjct: 656 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             +       +A   L  M   G+ PD +TY TL+   I+ +   + F+
Sbjct: 716 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 764



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 161/335 (48%), Gaps = 17/335 (5%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F  LK  GL     A N+LL G VK+G++  A  +  E+ RSGV  + +T +++I
Sbjct: 306 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 365

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     + E+ +  L +ME     P+   Y+ ++  Y  +G  +  F+++  M   G++
Sbjct: 366 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK 425

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR---A 494
           P    YN +I+   K      A    D ML  G+ PDT T+N L+    +C R D    A
Sbjct: 426 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDA 482

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E +F+EM  +G  P   +++ +I LL +    +   +   +M+  GL P+ V YT L+  
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGG 542

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + ++G   +A++  + + +Q           G     +  N+++N   +++  +EA  + 
Sbjct: 543 FCRNGVMSEALKVRDEMLEQ-----------GCXLDVVTYNTILNGLCKEKMLSEADELF 591

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             M E G+ PD  T+TTL+    +    +K  + +
Sbjct: 592 TEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 153/369 (41%), Gaps = 45/369 (12%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F    S   VP  +  S L  L S N  +D A      ++   L     ++Y+ILI    
Sbjct: 486 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD-NVIYTILIGGFC 544

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R+  + EA      +L Q   L  +TYN +++   +   L +A  L ++M + G   DF 
Sbjct: 545 RNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 604

Query: 230 NYSLVIQSLTRTNKID---------------------SSLLQKLYKEIECDKIELDGQLL 268
            ++ +I    +   ++                     ++L+    K  E +K+    +L 
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN---ELW 661

Query: 269 NDVIV---------------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           ND+I                G+   G  S+A R        G      T   ++     +
Sbjct: 662 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 721

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  ++A+     +   G+ P    YN L+ G++K   +  A  +V++ME SG+LPD  TY
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 781

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++++ ++  GR + A +++ +M      P+   Y+ ++ G+  +   +  F+V  EM  
Sbjct: 782 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 841

Query: 434 SGVEPDTHF 442
            G  PD  F
Sbjct: 842 RGFVPDDKF 850



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 48/335 (14%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER-SGVLPDEHTYSLLIDAYANAGRWESA 389
            K   ++++A++   V+   L DA+ V+  M R SGV   E   SL++  Y N G     
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVL-TYGNCG----- 285

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                         N  ++  ++  Y    + +   +  + +KS G+    +  N ++  
Sbjct: 286 -------------SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 332

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   +  A   +  ++  G++ +  T N +I+   K  + +  +    +M+E+G FP 
Sbjct: 333 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 392

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA----- 564
             TYN +IN    Q   E+   L+ +M  +GL P V TY  +++   ++G++  A     
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 452

Query: 565 ------------------IECLEGLSDQAVNAFRV---MRTDGLKPSNLALNSLINAFGE 603
                             +EC    +D  ++A R+   M + G+ P  ++ ++LI    +
Sbjct: 453 EMLKIGMSPDTATYNILLVECCR--NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +    +A    + MK  GL PD V YT L+    R
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 545


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 240/533 (45%), Gaps = 27/533 (5%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYE 181
           + + LLK  C +  + D A  ++        C      YSIL+ +L      G+++ L  
Sbjct: 148 IANHLLKGFCEAKRT-DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             +       +P  + Y+ +I    +  D+ KA +L  +M Q G   DF+ YS V+ +L 
Sbjct: 207 -MMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +D +  +   +++    +  +    N++I G++  G   +A+R     +   + P 
Sbjct: 266 KARAMDKA--EAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T + ++ +L   G+  EA  VF+ +   G  P   +Y  +L GY   G L D   +  
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G+ PD +T+++LI AYAN G  + A I+  EM     KP+   Y  ++A     G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     +   +M   GV PD + Y+ +I  F  +  L  A      +++ G+  D + ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I+   K GR   A+ +F+     G  P    Y+++++      + E   R+   M + 
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+ PN V Y TLV+ Y + GR D      EGLS      FR M   G+KPS +  N +I+
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRID------EGLS-----LFREMLQKGIKPSTILYNIIID 612

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
              E  R   A      M E+G+  +  TY  +++ L +    ++ F   +F 
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFK----NRCFDEAIFL 661



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 235/528 (44%), Gaps = 43/528 (8%)

Query: 166 YSILIHALGRSEK--LYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           Y+IL+    R+ +  L  AF   LL    R+  +  N L+         ++AL+ L+ + 
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRT 173

Query: 220 RQDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            + G   D  +YS++++SL    ++ + D  L         C     D    + VI GF 
Sbjct: 174 PELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP---DVVAYSTVIDGFF 230

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K GD +KA          G+ P   TY++V+ AL  +    +AEA   ++   G+ P   
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW 290

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+ GY   G  K+A  V  EM R  +LPD  T S+L+ +    G+ + AR V   M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    PN F Y+ +L GY  +G       +   M   G+ PD + +NV+I  +     L
Sbjct: 351 AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 410

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  F+ M   G++PD +T+ T+I    + G+ D A E F +M ++G  P    Y+ +
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           I            K L+  +   G+  ++V ++++++   + GR  DA            
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         CL G  ++A+  F  M + G++P+++   +L+N + +  R  E  +
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVD-------KFHKVFSSYLFFN 653
           + + M + G+KP  + Y  ++  L           KFH++  S +  N
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMN 638



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 203/485 (41%), Gaps = 29/485 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY  L+  C R    E AL    ++ + G   + I  + +++      + D +L   
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL 169

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL-SPKTATYAAVIT 308
           L++  E+ C        +L   +    K+G A   +R   MA+G  + SP    Y+ VI 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM--MAEGGAVCSPDVVAYSTVID 227

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G   +A  +F+E+ + G+ P    Y++++    K   +  AE  + +M   GVLP
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ LI  Y++ G+W+ A  V KEM      P+    S ++      G+ +    V 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   G  P+   Y +M++ +    CL      FD ML +GI PD  T+N LI  +  C
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D+A  +F EM++ G  P   TY  +I  L    + +D       M  QG+ P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 549 TTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRT 584
             L+  +   G    A E                        C  G    A N F +   
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            GL P+ +  + L++ +    +  +A  V   M   G++P+ V Y TL+    ++ +  +
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 645 VFSSY 649
             S +
Sbjct: 588 GLSLF 592



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 169/350 (48%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G   D + Y  VI +L R  K+D ++ +K  +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM-EKFNQ 454

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    + +I GF   G   KA   +      G+      ++++I  L   G
Sbjct: 455 MID-QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    Y+ L+ GY  +G ++ A  V   M  +G+ P++  Y 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +Y+ I+ G  + G          EM  S
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   YN+++    K  C   A+  F  + +  ++ + IT NT+I   F+  R + A
Sbjct: 634 GIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEA 693

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +   G  PC  TY+IMI  L ++   E+ + +  +M+  G  P+
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 174/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      N LLKG+ +     +A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIYSRIL 412
           + ++      G +PD  +YS+L+ +  + G+   A  +L+ M    A   P+   YS ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   Y+ ++    K   +  A A   +M+++G+ 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LI  +   G++  A  +F+EM+     P   T ++++  L +  + ++ + +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  PNV +YT +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPDIY 395

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KPDVVTY T++ AL R+ K       +
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKF 452



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 220/541 (40%), Gaps = 84/541 (15%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++HAL ++  +   EAFL     + + P   TYN LI   +     ++A+ +  +MR
Sbjct: 257 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDS--------------------SLLQKLYKEIEC-- 258
           +     D +  S+++ SL +  KI                      +++   Y    C  
Sbjct: 317 RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLV 376

Query: 259 -----------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                      D I  D    N +I  +A  G   KAM      +  G+ P   TY  VI
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-- 365
            AL   G+  +A   F ++ + G+ P   AY+ L++G+   G L  A+ ++SE+  +G  
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 366 ---------------------------------VLPDEHTYSLLIDAYANAGRWESARIV 392
                                            + P    YS+L+D Y   G+ E A  V
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
              M  +  +PN  +Y  ++ GY   G       + +EM   G++P T  YN++ID   +
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A   F  M   GI  +  T+N ++   FK   +D A  LF+E++         T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIIT 676

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            N MI  + +  R E+ K L  ++   GL+P VVTY+ ++          + I+  EGL 
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI---------TNLIK--EGLV 725

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           ++A + F  M+  G +P +  LN ++    +      A A L  + E     + +T   L
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLL 785

Query: 633 M 633
           +
Sbjct: 786 V 786



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 157/374 (41%), Gaps = 9/374 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I AL R  K+ +A      ++ Q        Y+ LI     +  L KA  L+S++ 
Sbjct: 432 YRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIM 491

Query: 221 QDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +G H D + +S +I +L +  ++ D+  +  L   +      +   +L D   G+   G
Sbjct: 492 NNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD---GYCLVG 548

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              KA+R        G+ P    Y  ++      GR  E  ++F E+ + G+KP T  YN
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 608

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ G  + G    A+    EM  SG+  ++ TY++++        ++ A  + KE+   
Sbjct: 609 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAM 668

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           + K N    + ++AG       +    +   +  SG+ P    Y++MI    K   +  A
Sbjct: 669 NVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEA 728

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M + G EPD+   N ++    K     RA     ++ ER +     T  ++++L
Sbjct: 729 EDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDL 788

Query: 520 LGEQERWEDVKRLL 533
              +    +  R L
Sbjct: 789 FSSKGTCREHIRFL 802



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/227 (21%), Positives = 104/227 (45%), Gaps = 7/227 (3%)

Query: 163 ELLYSILIHA---LGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           +++Y  L++    +GR ++    F  +L +  + + + YN +I           A     
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFH 628

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   +   Y++V++ L +    D ++   L+KE+    ++++   LN +I G  +
Sbjct: 629 EMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF--LFKELRAMNVKINIITLNTMIAGMFQ 686

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A          GL P   TY+ +IT L   G   EAE +F  ++ +G +P ++ 
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            N +++  +K   +  A   +S+++      +  T  LL+D +++ G
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 234/497 (47%), Gaps = 55/497 (11%)

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFI----NYSLVIQSLTRTNKIDSSLLQKLY 253
           ++I AC   DD+   L+ + +M +D     F     +Y+ ++  L R   ID   ++++Y
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDE--MKRVY 202

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA-------- 305
            E+  D I  +   LN ++  ++K G+  +A  ++      GLSP + TY +        
Sbjct: 203 TEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRN 262

Query: 306 ---------------------------VITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                                      +I  L  +GR  E  ++F++++E    P  + Y
Sbjct: 263 NDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTY 322

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             ++          +   + +EM      P+ HTY++++DA     + + +R +L EM  
Sbjct: 323 TVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMME 382

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ ++ GY + G  +   ++L  M+S+   P+   YN +I  F K   +H 
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHK 442

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM    +ML   + P  +T+N+LI    K G +D A +L + ++E G  P   TY++ I+
Sbjct: 443 AMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFID 502

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L + +R E+   L  +++ +G+  N V YT L+D + ++G+ D+AI  LE         
Sbjct: 503 TLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER-------- 554

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M ++   P++   NSLI    ++ +  E  ++++ M + G+KP V TYT L++ ++R
Sbjct: 555 ---MHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611

Query: 639 ---VDKFHKVFSSYLFF 652
               D  ++VF+  + F
Sbjct: 612 EGDFDHANRVFNQMVSF 628



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 215/474 (45%), Gaps = 21/474 (4%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L+P   TY +LI    RN+D+  A  + + M   G   + ++Y+ +I  L    +ID  +
Sbjct: 245 LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              L+K++  D      +    +I          + M      +     P   TY  ++ 
Sbjct: 305 --SLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVD 362

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A+    +  E+  +  E+ E GL P    YNAL++GY + G ++ A  ++  ME +   P
Sbjct: 363 AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRP 422

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +E TY+ LI  ++       A  +L +M  S   P+   Y+ ++      G +   +++L
Sbjct: 423 NERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLL 482

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             +K +G+ PD   Y+V IDT  K   +  A   F+ +  +GI+ + + +  LID H K 
Sbjct: 483 DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+ D A  L E M      P ++TYN +I  + ++ + ++   ++ NM   G+ P V TY
Sbjct: 543 GKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATY 602

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L++   + G F           D A   F  M + G KP      + I+ +       
Sbjct: 603 TILIEEMLREGDF-----------DHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           EA  ++  M E G+ PD +TYT L+ A      + ++  +Y  FN+ K +  +G
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLISA------YERLGLAYDAFNVLKRMLDAG 699



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/475 (23%), Positives = 216/475 (45%), Gaps = 20/475 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SL+   C +N  ++ AY V + +     C   E+ Y+ +IH L  + ++ E   L ++
Sbjct: 252 YTSLILGYCRNND-VNSAYKVFNMMPNKG-CRRNEVSYTTIIHGLCEAGRIDEGISLFKK 309

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R      T  TY  +I A   ND   + ++L ++MR+     +   Y++++ ++ +  K
Sbjct: 310 MREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERK 369

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D S  +++  E+    +       N +I G+ + G    A+  LG+ +     P   TY
Sbjct: 370 LDES--RRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTY 427

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I   S      +A  +  ++ ES L P    YN+L+    K G+   A  ++  ++ 
Sbjct: 428 NELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G++PD+ TYS+ ID    + R E A  +   ++    K N  +Y+ ++ G+   G+   
Sbjct: 488 NGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDE 547

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +L+ M S    P++  YN +I    K   +   ++  + M   G++P   T+  LI+
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE 607

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G +D A  +F +M   G+ P   TY   I+        ++ + ++  M   G++P
Sbjct: 608 EMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP 667

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +TYT L+  Y + G           L+  A N  + M   G  PS+   N+LI
Sbjct: 668 DSLTYTLLISAYERLG-----------LAYDAFNVLKRMLDAGCDPSHPIWNNLI 711


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 250/542 (46%), Gaps = 19/542 (3%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILI 170
           R  F L  +  A P     + +   C +   +D+A A+V  + +       +   Y+++I
Sbjct: 142 RAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVI 201

Query: 171 HALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
             L RS K  +A  +        + P  +TYN +I    +  DLE    L  +M  DG  
Sbjct: 202 AGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPK 261

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            + + Y++++  L R  ++D +  + L  E+    +  DG   + +  G  + G++   +
Sbjct: 262 PNIVTYNVLLSGLCRAGRMDET--RVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 319

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                +   G+     T + ++  L   G+  +AE V E L  +GL P T  YN L+ GY
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 379

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            ++  L+ A  +  +M+   + PD  TY+ LI+          A  ++ EME S   P+ 
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             ++ ++  Y   G+ ++ F VL +M+  G++ D   +  ++  F K   +  A+A  D 
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+ + + P+   +N++ID + + G  ++A  L E+M+  G      TYN+++  L    +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            ++ + L+  +R QGL P+VV+Y T++      G  D A+E L     Q +N +      
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL-----QEMNKY------ 608

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G++P+    ++L++A     R  +   + Q M    ++P    Y  ++ A +R +   KV
Sbjct: 609 GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKV 668

Query: 646 FS 647
            S
Sbjct: 669 AS 670



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 232/514 (45%), Gaps = 32/514 (6%)

Query: 164 LLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM-R 220
           LL S+L   +GR   +  AF  L++   R     +N ++ AC    DL+ AL ++ +M R
Sbjct: 128 LLESLLF--VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGR 185

Query: 221 QDGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +G    D  +Y++VI  L R+ K   +L  K++ E+    +  +    N +I G  K G
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDAL--KVFDEMVDMGVVPNWITYNTMIDGHVKGG 243

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D     R        G  P   TY  +++ L  +GR  E   + +E+    + P    Y+
Sbjct: 244 DLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS 303

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L  G  + G  +    + +E  + GV+   +T S+L++     G+   A  VL+ +  +
Sbjct: 304 ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 363

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P + IY+ ++ GY    + +  F + ++MKS  + PD   YN +I+   K   +  A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M   G++P   T+NTLID +   G+ ++   +  +MQ++G      ++  ++  
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  +  +   +L +M  + + PN   Y +++D Y +SG  + A   +E + +  V+A 
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543

Query: 580 RV------------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            V                        +R  GL+P  ++ N++I+A        +A  +LQ
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M + G++P + TY TL+ AL    + H +   Y
Sbjct: 604 EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLY 637



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 159/344 (46%), Gaps = 7/344 (2%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQ 221
           SIL++ L   G+  K  +   +     L P T  YN LI+   +  DL  A  +  +M+ 
Sbjct: 338 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D I Y+ +I  L +   +  +  + L  E+E   ++   +  N +I  +  AG  
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKA--EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K    L   Q  G+     ++ +V+ A   +G+  EA A+ +++    + P  + YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y++ G  + A  +V +M+ SGV     TY+LL+     + + + A  ++  +     
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P+   Y+ I++   ++G+  +  ++L+EM   G+ P    Y+ ++        +H    
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 635

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            + +ML + +EP +  +  ++D + +C    +   L +EM E+G
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 142/304 (46%), Gaps = 26/304 (8%)

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           LP   + +LL+++    GR    R     +  + A+P++F +++++      G+      
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 427 VLKEM-KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           +++ M +S G  P   F YNV+I    +      A+  FD M+  G+ P+ IT+NT+ID 
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           H K G  +    L ++M   G  P   TYN++++ L    R ++ + L+  M +  + P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 545 VVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEGLSDQAVNAFR 580
             TY+ L D   ++G        F ++++                 C +G   +A     
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           ++   GL P+ +  N+LIN + + +    AF + + MK   ++PD +TY  L+  L +++
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 641 KFHK 644
              K
Sbjct: 419 MVTK 422



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/418 (21%), Positives = 184/418 (44%), Gaps = 9/418 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           ++ LL  LC +   +D    ++  +  H++ +     YSIL   L   G S  +   F  
Sbjct: 267 YNVLLSGLCRAGR-MDETRVLMDEMASHSM-FPDGFTYSILFDGLTRTGESRTMLSLFAE 324

Query: 186 SQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           S ++   L   T + L++   ++  + KA  ++  +   G     + Y+ +I    +   
Sbjct: 325 SLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRD 384

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +    ++++++   I  D    N +I G  K    +KA   +   +  G+ P   T+
Sbjct: 385 LRGAFC--IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I A   +G+  +   V  ++++ G+K    ++ +++K + K G + +A  ++ +M  
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             V P+   Y+ +IDAY  +G  E A +++++M+ S    +   Y+ +L G     +   
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +++  +++ G+ PD   YN +I           A+     M   GI P   T++TL+ 
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVS 622

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
                GR    E L+++M  +   P ++ Y IM++     E    V  L   M  +G+
Sbjct: 623 ALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 13/284 (4%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           + Y+ LI+ L + E + +A    +  ++  + P   T+N LI A      LEK   ++S 
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           M+Q G   D I++  V+++  +  KI  +   L   +YK++       + Q+ N +I  +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA-----PNAQVYNSIIDAY 519

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++GD  +A   +   +  G+S    TY  ++  L  S +  EAE +   L+  GL+P  
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            +YN ++      G    A  ++ EM + G+ P   TY  L+ A A+AGR      + ++
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           M   + +P+S IY  ++  Y       +   + KEM   G+  D
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN++I A   + D E+A  L+ KM+  G     + Y+L+++ L R+++ID +  ++L  
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA--EELIY 568

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    +  D    N +I      GD  KA+  L      G+ P   TY  +++AL+++G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           R  + E +++++    ++P +  Y  ++  YV+         +  EM   G+  D+
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 195/424 (45%), Gaps = 13/424 (3%)

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           K+ ++GY  D I  +  I+      +I  +L    + ++      LD      +I G  K
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQAL--HFHDKVIAMGFHLDQVSYGTLINGLCK 310

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+   A+  L    G  + P    Y  +I  +       +A  ++ E     + P    
Sbjct: 311 VGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFT 370

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YNAL+ G+  +G LKDA  + ++M    ++PD +T+S+L+D +   G  + A+ VL  M 
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMM 430

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   YS ++ GY    E  +   +   M   GV  +   YN+MI+ F K   + 
Sbjct: 431 KQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVD 490

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AM  F  M  + I PD IT+++LID   K GR   A EL +EM  RG  P   TYN ++
Sbjct: 491 EAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + L ++   +    LL  ++ QG+ P++ TYT LV    QSG+ +DA +  E L  +  N
Sbjct: 551 DALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                          A   +I  F +     EA A+L  M+ENG  PD  TY  ++ +L 
Sbjct: 611 L-----------DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 659

Query: 638 RVDK 641
             D+
Sbjct: 660 EKDE 663



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 7/382 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  +   A  L +R   + + P  + YN +I    ++  +  A +L S+  
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D   Y+ +I       K+  ++   L+ ++    I  D    + ++ GF K G+
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAI--DLFNKMTSKNIIPDVYTFSILVDGFCKDGN 418

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L M     + P   TY++++          +AE++F  +   G+    ++YN 
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+ K+  + +A  +  EM    + PD  TYS LID    +GR   A  ++ EM    
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   Y+ IL     +    +   +L ++K  G+ PD + Y +++    +   L  A 
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ +L +G   D   +  +I      G +D A  L  +M+E G  P   TY I+I  L
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658

Query: 521 GEQERWEDVKRLLGNMRAQGLL 542
            E++  +  ++LL  M  +GLL
Sbjct: 659 FEKDENDMAEKLLREMIMRGLL 680



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 11/349 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ +I  + + + + +AF L S++  +R+ P   TYNALIS       L+ A++L +K
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           M       D   +S+++    +   I  +  +L  + K+     I+ D    + ++ G+ 
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ----SIKPDVVTYSSLMDGYC 449

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              + +KA          G++    +Y  +I          EA  +F+E+    + P   
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y++L+ G  K G +  A  +V EM   G  PD  TY+ ++DA       + A  +L ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +    +P+   Y+ ++ G    G+ +   +V +++   G   D + Y VMI  F      
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
             A+A   +M   G  PD  T+  +I   F+    D AE+L  EM  RG
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 161/387 (41%), Gaps = 46/387 (11%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P    +  ++ +L  S       ++ ++++  G+K      N L+  + ++G +    F
Sbjct: 107 TPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLI---PF 163

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR---IVLKEMEVSHAKPNSFIYSR--- 410
             S + R GV    +   +L D +      +  R   IVL   +        F+ SR   
Sbjct: 164 AFSVLTR-GV----YWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFN 218

Query: 411 ILAGYRDRGEWQRTF----QVLKEMKSS-----------GVEPDTHFYNVMIDTFGKYNC 455
           +L  ++   E+ +TF     +LK  + S           G EPDT      I  F     
Sbjct: 219 VLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQ 278

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +H A+   D++++ G   D +++ TLI+   K G    A EL      +   P    YN 
Sbjct: 279 IHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNT 338

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ + + +   D   L     ++ + P+V TY  L+  +   G+  DAI+         
Sbjct: 339 IIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID--------- 389

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M +  + P     + L++ F +D    EA  VL  M +  +KPDVVTY++LM  
Sbjct: 390 --LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDG 447

Query: 636 LIRVDKFHKVFSSYLFFNIYKMLSYSG 662
              V++ +K  S      I+  +S+ G
Sbjct: 448 YCLVNEVNKAES------IFNTMSHRG 468


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 245/532 (46%), Gaps = 25/532 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLY 180
           VP  + +S+L +       ID A+ +V  +   N C    + Y+ LI  L    ++EK Y
Sbjct: 112 VPDVVTYSILADGLCKRGRIDEAFELVKEMS-GNGCTPNLVTYNTLIDGLCKASKTEKAY 170

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           E           P  +TY  ++    +   L+KAL ++  M + G     I Y+ +++ L
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            RT ++D +    ++KE+       D      ++ G+ K+    +A + +    G+  +P
Sbjct: 231 CRTGRVDEA--HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV---DGIRGTP 285

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y A++      GR  E   VFE++   G  P  K YN ++ G  K G + +A   +
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 345

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M  +G +PD  +Y+++ID    A + + AR VL +M  +   P++  Y+ ++A +   
Sbjct: 346 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 405

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTIT 477
             +     +LK M  +GV+PD   YN +I    + N L  A      ML  G +     T
Sbjct: 406 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 465

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NT+ID   K G   +A  L + M   G    T TYNI I+ L ++ R ++   LL  M 
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
               L + V+YTT++    ++ + D A          +  A  ++   GL  ++   N L
Sbjct: 526 T---LRDEVSYTTVIIGLCKAEQLDRA----------SKLAREMVAVKGLCITSHTFNLL 572

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           I+AF + +R  EA  +L+ M + G  P V+TY  ++  L ++DK  K +  +
Sbjct: 573 IDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 218/488 (44%), Gaps = 33/488 (6%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           A +  +  R +  TYN LIS   +  ++++A  L+ +    G+  D + YS++   L + 
Sbjct: 69  AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +ID +   +L KE+  +    +    N +I G  KA    KA   L      G  P   
Sbjct: 129 GRIDEAF--ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L   GR  +A  + E + + G  P    Y AL++G  + G + +A  +  EM
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
                  D   Y  L++ Y  + R + A+ V+  +      P   +Y+ ++ GY   G  
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRL 303

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                V ++M   G  P+   YN+++D   K+  +  A    + M S G  PD +++N +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID  FK  +   A ++ ++M + G  P   TYN ++    ++ER++D   +L NM   G+
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE-------------------------CLEGLSDQAV 576
            P+ VTY TL+    Q+ R  DA E                         C EG   QA+
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M   G++ + +  N  I+   ++ R  EA ++L  M  + L+ D V+YTT++  L
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLR-DEVSYTTVIIGL 540

Query: 637 IRVDKFHK 644
            + ++  +
Sbjct: 541 CKAEQLDR 548



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 43/406 (10%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G  KA    KA   L      G++P T T+ +++  L  +G+   A ++   + E
Sbjct: 14  NILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 73

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
              +P    YN L+ G  K   +  A+ +V E   SG +PD  TYS+L D     GR + 
Sbjct: 74  RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDE 133

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++KEM  +   PN   Y+ ++ G     + ++ +++L+ + SSG  PD   Y +++D
Sbjct: 134 AFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVD 193

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER---- 504
              K   L  A+   + ML  G  P  IT+  L++   + GR D A  +F+EM  +    
Sbjct: 194 GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTA 253

Query: 505 ----------GYF------------------PCTTTYNIMINLLGEQERWEDVKRLLGNM 536
                     GY                   P    YN +++   ++ R +++  +  +M
Sbjct: 254 DALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDM 313

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +G +PN+ TY  ++D   + G+ D+A   LE            M + G  P  ++ N 
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES-----------MHSAGCVPDVVSYNI 362

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +I+   +  +  EA  VL  M + G+ PD VTY TLM    + ++F
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 226/514 (43%), Gaps = 46/514 (8%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI  L ++ K  +A   L     R +TP  +T+N+++    +    E+A +L++ M 
Sbjct: 13  YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV------G 274
           +         Y+ +I  L +   +D +  + L  E       +    + DV+       G
Sbjct: 73  ERNCRPSCCTYNTLISGLCKQQNVDRA--KTLVDEF------VSSGFVPDVVTYSILADG 124

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             K G   +A   +    G G +P   TY  +I  L  + +T +A  + E L  SG  P 
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              Y  ++ G  K G L  A  +V  M + G  P   TY+ L++     GR + A  + K
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM       ++  Y  ++ GY      +   +V+  ++ +   P    YN ++D + K  
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEG 301

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L      F+ M   G  P+  T+N ++D   K G+ D A    E M   G  P   +YN
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+I+ L +  + ++ +++L  M   G+ P+ VTY TL+  + +  RFDD           
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD----------- 410

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG-LKPDVVTYTTLM 633
           AV   + M   G+ P N+  N+LI+   +  R  +A+ ++  M  NG +     TY T++
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 470

Query: 634 ----------KALIRVDKF--HKVFSSYLFFNIY 655
                     +AL+ +D    H V ++ + +NI+
Sbjct: 471 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIF 504



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 17/324 (5%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P    YN L+ G  K      A  ++ EM   GV PD  T++ ++D    AG+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           +E A  +L  M   + +P+   Y+ +++G   +    R   ++ E  SSG  PD   Y++
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           + D   K   +  A      M   G  P+ +T+NTLID   K  + ++A EL E +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TY I+++ L ++ R +   +++  M  +G  P+V+TYT L++   ++GR     
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV---- 236

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                  D+A + F+ M +       LA  SL+N + +  R  EA  V+  ++     P 
Sbjct: 237 -------DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PY 286

Query: 626 VVTYTTLMKALI---RVDKFHKVF 646
           +  Y  LM       R+D+   VF
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVF 310



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 7/344 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN ++    ++  +++A   +  M   G   D ++Y+++I  L + +K   +  Q L +
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR-QVLDQ 382

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   I  D    N ++  F K      A+  L      G+ P   TY  +I+ LS + 
Sbjct: 383 MIQ-AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441

Query: 315 RTIEA-EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R  +A E + E L+   +      YN ++    K G LK A  ++  M   GV  +  TY
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++ ID     GR + A  +L EM+      +   Y+ ++ G     +  R  ++ +EM +
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVA 558

Query: 434 -SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+   +H +N++ID F K   L  A+   + M+  G  P  IT+N +I C  K  + D
Sbjct: 559 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVD 618

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           +A ELF+EM  RG    + +Y ++I  L  Q R ++  ++L  M
Sbjct: 619 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 243/574 (42%), Gaps = 64/574 (11%)

Query: 77  LQKQRYDFTPLLN-FLSENSNSESASALASSP----SSLNRVEFKLAESYRAVPAPLWHS 131
           LQ+ R      LN  L+  + +  +S++   P    S  NR+    A + +  P      
Sbjct: 91  LQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRM--ARAGAKKVAPDIATFG 148

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR- 190
           +L + C     ++L +A +  + K  L  +  + ++ L+  L   ++  +A  +  R+  
Sbjct: 149 ILISCCCDAGCLNLGFAALGQIIKTGL-RAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMP 207

Query: 191 ---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNK 243
               TP   +Y  L+         E+A  L+  M +DG +C  + ++Y+ VI        
Sbjct: 208 ELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH------- 260

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                                         GF K GD  KA          G+ P   T 
Sbjct: 261 ------------------------------GFFKEGDVGKAYTLFCKMLDHGIPPNVVTC 290

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +VI  L       +AEAV +++ +  + P    YN+L+ GY+  G   +A  ++ EM R
Sbjct: 291 NSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSR 350

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  TYS+LID    +G    AR +   M  S  KPN+  Y  +L GY   G    
Sbjct: 351 DGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVD 410

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V   M  +G+ P  H +N+ I  + K   L  A   F++M  +G  PD + + T+ID
Sbjct: 411 MNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVID 470

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR D A   F +M + G  P   T+N +I+      +WE  + L   M  +G+ P
Sbjct: 471 GLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPP 530

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV T+ +++D   + G+             +A   F +M   G KP+ ++ N++I+ +  
Sbjct: 531 NVNTFNSMIDKLFKEGKV-----------TEARKLFDLMPRAGAKPNVVSYNTMIHGYFI 579

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                E   +L  M   GLKP  VT+ TL+  ++
Sbjct: 580 AGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 223/527 (42%), Gaps = 41/527 (7%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
           A  +  LL+ LC+   + D    V+  + +   C      Y+ L+  L   +K  EA   
Sbjct: 179 AVTFTPLLRTLCAEKRTSDAMNIVLRRMPELG-CTPDVFSYTTLLKGLCAEKKCEEAAEL 237

Query: 183 -FLLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
             ++++     P   ++Y  +I    +  D+ KA  L  KM   G   + +  + VI  L
Sbjct: 238 IHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 297

Query: 239 TRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            +   +D +  +LQ++  E     I  +    N +I G+  +G  ++A+R L      G 
Sbjct: 298 CKVQAMDKAEAVLQQMIDE----HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 353

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   TY+ +I  L  SG   EA  +F  + +SG KP    Y +LL GY   G L D   
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNN 413

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           V   M ++G+ P  H +++ I AY   GR + A +   +M+     P+   Y+ ++ G  
Sbjct: 414 VKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLC 473

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G          +M   G+ PD   +N +I  F  +     A   F  M+  GI P+  
Sbjct: 474 KIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVN 533

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N++ID  FK G+   A +LF+ M   G  P   +YN MI+         +V +LL +M
Sbjct: 534 TFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 593

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
              GL P  VT+ TL+D                            M + GLKP  +   +
Sbjct: 594 LLIGLKPTAVTFNTLLD---------------------------GMVSMGLKPDVVTCKT 626

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           LI++  ED R  +   + + M     K D +T    ++ +     +H
Sbjct: 627 LIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKASYH 673



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 157/357 (43%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           ++P  AT+  +I+   ++G      A   ++ ++GL+ +   +  LL+         DA 
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRIL 412
             V+  M   G  PD  +Y+ L+       + E A  ++  M  +  +  PN   Y+ ++
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  + + +  +M   G+ P+    N +ID   K   +  A A   +M+ E I 
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N+LI  +   G++  A  + +EM   G  P   TY+++I+ L +     + + +
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             +M   G  PN  TY +L+  Y   G   D             N   +M  +G++P   
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDM-----------NNVKDLMVQNGMRPGRH 428

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N  I A+ +  R  EA      M++ G  PD+V YTT++  L ++ +     S +
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRF 485


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 242/505 (47%), Gaps = 25/505 (4%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP------LTY 196
           +D A  ++  +++ N C    + ++  +H L    ++ +A  L    R T       + Y
Sbjct: 69  LDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAY 128

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           N LI+   +  D ++AL++  +++Q+G  C  + +++  ++  L + ++   +L   +++
Sbjct: 129 NTLIAGYCKAGDGDRALDMFRRLKQEG-SCKPNAVSFDTLVIFLCKMSRATDAL--AVFQ 185

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    ++ D  + N +I    + G   +A R L        +    TY  ++ A   +G
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAG 245

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTY 373
           +  E  +  E  +  G       YN +++G+++ G L +A +   S M +  V PD  TY
Sbjct: 246 QMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV-PDVFTY 304

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +LLI A   + + E A  + +E E      + F YS ++  +   G   +  +V   M+ 
Sbjct: 305 NLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQK 363

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PDT  YNV+I   GK   +  A+   + M  +GI PD  T+N +ID    CGRY++
Sbjct: 364 AGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEK 423

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A   F  M+ R + P   TYN ++N L +  R ++   L   M+A   +P++ T+ TL+D
Sbjct: 424 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 483

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++GR +DA+E           + R+++  G  P++   N+LI+ F    +  + + +
Sbjct: 484 TLAKAGRMEDALE----------QSARLVKM-GHAPNSYIYNALISGFCRSGQVDKGYEL 532

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            Q M E    PD +TYT L+    R
Sbjct: 533 FQDMIECSCFPDSITYTILVLGFSR 557



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 21/457 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSL 248
           L+ +T    I A  R  DL+ A+ ++  MR+ G  C  D + ++  +  L    +++ ++
Sbjct: 51  LSEVTCTECIQAFGRAGDLDAAMGMLDDMRR-GNFCQPDTVAFTAAMHWLCEVRRVEQAM 109

Query: 249 LQKLYKEIE--CDKIELDGQLLNDVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAA 305
              L+ ++   CD    D    N +I G+ KAGD  +A+  F  + Q     P   ++  
Sbjct: 110 --TLFDDMRETCD-CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDT 166

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L    R  +A AVF+E+  +GLK      N L+    ++G L+ A  ++  M    
Sbjct: 167 LVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHA 226

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
              D  TY +L++A+  AG+       ++         ++  Y+ I+ G+   G      
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+ +   +    PD   YN++I    K   L  A+  F      G+  D  T++ L+D  
Sbjct: 287 QLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR  +A E+F  MQ+ G  P T  YN++I+ LG+Q + ++   LL +M  +G++P+ 
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            TY  ++D+    GR++           +A + F +M+     P  +  N+L+N   + +
Sbjct: 406 RTYNIVIDVLSSCGRYE-----------KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLR 454

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           R  EA  +   M+ N   PD+ T+ TL+  L +  + 
Sbjct: 455 RTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 491



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 3/371 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TY  L++A  R   + +  + M   R DG     +NY+ +IQ   R  ++  +   +L+
Sbjct: 232 FTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA--TQLF 289

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E    K  +      ++++   K+    +A+     A+  G+     TY+ ++ A   +
Sbjct: 290 -ESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +A  VF  ++++G  P T  YN L+    K G + +A  ++ +M R G++PD  TY
Sbjct: 349 GRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 408

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++ID  ++ GR+E A      M+     P+   Y+ +L G +          +  EM++
Sbjct: 409 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 468

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +   PD   +  +IDT  K   +  A+    R++  G  P++  +N LI    + G+ D+
Sbjct: 469 NKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK 528

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             ELF++M E   FP + TY I++     +        LL  M  +G  P + TY  L+ 
Sbjct: 529 GYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIR 588

Query: 554 IYGQSGRFDDA 564
               +G+ +DA
Sbjct: 589 SLSMAGQVEDA 599



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 10/402 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKAL 213
           C      Y IL++A  R+ +++E     +  R     L+ + YN +I    R   L +A 
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286

Query: 214 NLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
            L  S M ++    D   Y+L+I +L ++ +++ +L   L++E E   + LD    + ++
Sbjct: 287 QLFESTMTKESVP-DVFTYNLLI-ALCKSKQLEEAL--TLFQEAEQGGVVLDVFTYSYLM 342

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             F KAG A+KA+      Q  G  P T  Y  +I+ L   G+  EA  + E++   G+ 
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  + YN ++      G  + A      M+R    PD  TY+ L++      R + A  +
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             EM+ +   P+   +  ++      G  +   +    +   G  P+++ YN +I  F +
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCR 522

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +      F  M+     PD+IT+  L+    + G    A EL +EM   G+ P   T
Sbjct: 523 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 582

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           YN++I  L    + ED   L   M A+G  P++ TY+ L ++
Sbjct: 583 YNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNL 624



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 174/396 (43%), Gaps = 18/396 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            + I  F +AGD   AM  L  M +G    P T  + A +  L    R  +A  +F++++
Sbjct: 57  TECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMR 116

Query: 328 ES-GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL-PDEHTYSLLIDAYANAGR 385
           E+    P   AYN L+ GY K G    A  +   +++ G   P+  ++  L+       R
Sbjct: 117 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 176

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  V +EM  +  K +  + + ++      G  ++  ++L  M +     D   Y +
Sbjct: 177 ATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGI 236

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +++   +   +H   +  +    +G     + +N +I    +CGR   A +LFE    + 
Sbjct: 237 LVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKE 296

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TYN++I L  + ++ E+   L       G++ +V TY+ L+D +G++GR   A+
Sbjct: 297 SVPDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKAL 355

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           E            F  M+  G  P  +  N LI+  G+  +  EA  +L+ M   G+ PD
Sbjct: 356 E-----------VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 404

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
             TY  ++  L    ++ K +S   FF + K   +S
Sbjct: 405 CRTYNIVIDVLSSCGRYEKAYS---FFGMMKRRKHS 437



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 147/373 (39%), Gaps = 26/373 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL     T  A++  +   GRT     +  EL++ G+          ++ + + G L  A
Sbjct: 13  GLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAA 72

Query: 355 EFVVSEMERSGVL-PDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRIL 412
             ++ +M R     PD   ++  +       R E A  +  +M E     P+   Y+ ++
Sbjct: 73  MGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLI 132

Query: 413 AGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           AGY   G+  R   + + +K  G  +P+   ++ ++    K +    A+A F  ML  G+
Sbjct: 133 AGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGL 192

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           + D    NTLI C  + G   +A  L   M          TY I++N      +  +V  
Sbjct: 193 KADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVAS 252

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-----------------------CL 568
            +   R  G   + V Y  ++  + + GR  +A +                       C 
Sbjct: 253 FMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIALCK 312

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               ++A+  F+     G+       + L++AFG+  R A+A  V   M++ G  PD V 
Sbjct: 313 SKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVV 372

Query: 629 YTTLMKALIRVDK 641
           Y  L+  L +  K
Sbjct: 373 YNVLISCLGKQGK 385


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 223/502 (44%), Gaps = 27/502 (5%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACA--R 205
           AVV  LQ+  +  S           L R+ +      +  R R+ P T+   ++A A  R
Sbjct: 120 AVVPLLQRRPVSASQG--------GLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCR 171

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
               ++AL L+  M + G   D + Y  VI +L     +  +    L  E+       D 
Sbjct: 172 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA--ATLLNEMLLMGCAADV 229

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              +DV+ G    G   +A R +      G  P   TY  ++  L    +  EA A+   
Sbjct: 230 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 289

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  +      +N ++ G +  G L +A  +   M   G  PD HTYS+L+      GR
Sbjct: 290 VPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGR 345

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             SA  +L+EME     PN   Y+ +L  +   G W  T  +L+EM + G+  ++  YN 
Sbjct: 346 IGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNG 405

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           MI    K   +  AM     M S+G  PD  ++NT+I       + + AE +FE + E G
Sbjct: 406 MIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEG 465

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                 TYN +I+ L    RW+D  RL   M   G   +VV+Y  L+    + G  D ++
Sbjct: 466 VVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSL 525

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             LE ++++           G+KP+N++ N LI+   +++R  +A  + + M   GL PD
Sbjct: 526 VLLEEMAEK-----------GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPD 574

Query: 626 VVTYTTLMKALIRVDKFHKVFS 647
           +VTY TL+  L ++   H   +
Sbjct: 575 IVTYNTLINGLCKMGWMHAALN 596



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 175/397 (44%), Gaps = 13/397 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C    + Y  L+  L R  +  EA  +L +   L  + +N +I  C     L +A  L  
Sbjct: 260 CMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 319

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   YS+++  L +  +I S++  +L +E+E      +      V+  F K
Sbjct: 320 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAV--RLLREMEKKGFAPNVVTYTIVLHSFCK 377

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G        L      GL+  +  Y  +I AL   GR  EA  + +E++  G  P   +
Sbjct: 378 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++        +++AE +   +   GV+ +  TY+ +I A    GRW+ A  + KEM 
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 497

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +     +   Y+ ++      G   R+  +L+EM   G++P+   YN++I    K   + 
Sbjct: 498 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 557

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+    +ML++G+ PD +T+NTLI+   K G    A  L E++      P   TYNI+I
Sbjct: 558 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617

Query: 518 NLLGEQERWEDVKRLL----------GNMRAQGLLPN 544
           +   +    +D   LL          G+ R   +LP+
Sbjct: 618 SWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 654



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 187/455 (41%), Gaps = 35/455 (7%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNA 198
           D A A++  + +H  C    +LY  +IHAL     + EA  L     L        T++ 
Sbjct: 176 DEALALLRGMARHG-CVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 234

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK----- 251
           ++        + +A  L+ +M   G     + Y  ++Q L R  + D +  +L +     
Sbjct: 235 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 294

Query: 252 ----------------------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
                                 LY+ +     + D    + ++ G  K G    A+R L 
Sbjct: 295 VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLR 354

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +  G +P   TY  V+ +   +G   +  A+ EE+   GL   ++ YN ++    K G
Sbjct: 355 EMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDG 414

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + +A  ++ EM   G  PD  +Y+ +I    N  + E A  + + +       N   Y+
Sbjct: 415 RMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYN 474

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            I+      G WQ   ++ KEM   G   D   YN +I    K   +  ++   + M  +
Sbjct: 475 TIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK 534

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI+P+ +++N LI    K  R   A EL ++M  +G  P   TYN +IN L +       
Sbjct: 535 GIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAA 594

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             LL  +  + + P+++TY  L+  + +    DDA
Sbjct: 595 LNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 14/468 (2%)

Query: 179 LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           LY  F LS    + PL  + L+S C+ +  + ++  L   M++DG      + +L ++SL
Sbjct: 99  LYTLFSLSSTP-MKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESL 157

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
             T + + +L  +L+ EI    +  D  +    I    K GD  +A+  +   +  G+SP
Sbjct: 158 VSTKRYEDTL--QLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSP 215

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y  VI  L    R  +AE +F+E+ +  + P    YN L+ GY K+G L++A  + 
Sbjct: 216 GVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIR 275

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M+   V P   T++ L++    A   E A+ VL+EMEV    P+ F Y+ +  G+   
Sbjct: 276 ERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G    +  + +E    GV+   +  +++++   K   +  A     + L  G+ P  + +
Sbjct: 336 GNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFF 395

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NT+++ + + G  ++A    E+M+  G  P   TYN ++    E +  E+ ++ +  M  
Sbjct: 396 NTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVE 455

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G+LPNV TY TL+D YG+S  FD   + LE            M   GLKP+ ++   LI
Sbjct: 456 KGVLPNVETYNTLIDGYGRSCLFDRCFQILEE-----------MEKKGLKPNVISYGCLI 504

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N   +D    EA  +L  M   G+ P+   Y  L+       K    F
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/587 (24%), Positives = 266/587 (45%), Gaps = 33/587 (5%)

Query: 78  QKQRYDFTPLLNFLSENSNSESASALA----------SSPSSLNRVEFKLAESYRAVPAP 127
           ++ R++    L  L +   +E+A  L           SSPS L  + F L+ +      P
Sbjct: 57  EQARHEHVQKLQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLYTL-FSLSSTPMK---P 112

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYEAF-- 183
           L+  +L ++CS +  +  +  +   ++K  +  S   L   L  + +  R E   + F  
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++    R     Y   I A  +  DL++A+ LM+ M++ G       Y++VI  L +  +
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  +KL+ E+   ++  +    N +I G+ K G   +A       +   + P   T+
Sbjct: 233 MKDA--EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITF 290

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME- 362
            +++  L  +    EA+ V EE++  G  P    Y  L  G++K G + DA   +SE   
Sbjct: 291 NSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV-DASITLSEEAV 349

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R GV   ++T S+L++A    G  E A  VLK+   +   P    ++ I+ GY   G+  
Sbjct: 350 RKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDIN 409

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           + +  +++M++ G+ P+   YN ++  F +   +  A     +M+ +G+ P+  T+NTLI
Sbjct: 410 KAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D + +   +DR  ++ EEM+++G  P   +Y  +IN L +     + + +LG+M  +G++
Sbjct: 470 DGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVV 529

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN   Y  L+D    +G+  DA              F  M    + P+ +  N LIN   
Sbjct: 530 PNAQIYNMLIDGSCIAGKLKDAFR-----------FFDEMVAREIVPTLVTYNILINGLC 578

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  +  EA  +   +   GL  DV+TY +L+          K    Y
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELY 625



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 232/513 (45%), Gaps = 36/513 (7%)

Query: 164 LLYSILIHALGR------SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
            +Y+++I  L +      +EKL++  L    +R+ P  +TYN LI    +   LE+A N+
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEML---DRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
             +M+ +      I ++ ++  L R   ++ +  Q++ +E+E      D      +  G 
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRAQMMEEA--QRVLEEMEVYGFVPDRFTYTTLFDGH 332

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K G+   ++     A   G+     T + ++ AL   G   +AE V ++  E+GL P  
Sbjct: 333 LKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVG 392

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             +N ++ GY ++G +  A   + +ME  G+ P+  TY+ L+  +      E A   +K+
Sbjct: 393 VFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKK 452

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M      PN   Y+ ++ GY     + R FQ+L+EM+  G++P+   Y  +I+   K   
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN 512

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A      M+  G+ P+   +N LID     G+   A   F+EM  R   P   TYNI
Sbjct: 513 ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +IN L ++ +  + + L   +  +GL  +V+TY +L+  Y  +G    A+E  E +    
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632

Query: 576 VNA-----------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           +                         ++ M    L P  +  N+LI+ + E     +A +
Sbjct: 633 IKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACS 692

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +   M+  G++PD +TY  L+    +  + HKV
Sbjct: 693 LHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKV 725



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 189/437 (43%), Gaps = 41/437 (9%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQ 221
           SIL++AL   G  EK  E         L P+   +N +++   +  D+ KA   + KM  
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + + Y+ +++       ++ +  +K  K++    +  + +  N +I G+ ++   
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEA--EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLF 478

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +  + L   +  GL P   +Y  +I  L      +EAE +  ++   G+ P  + YN L
Sbjct: 479 DRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNML 538

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G    G LKDA     EM    ++P   TY++LI+     G+   A  +  E+     
Sbjct: 539 IDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK--------- 452
             +   Y+ +++GY   G  Q+  ++ + MK SG++P  + Y+ +I   GK         
Sbjct: 599 SFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI 658

Query: 453 ---------------YNCLHH----------AMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
                          YN L H          A +    M ++GI+PD +T+N LI  HFK
Sbjct: 659 YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            GR  + + L  +M+ RG  P T TY+I+I    + + ++        M   G  P+V  
Sbjct: 719 EGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSI 778

Query: 548 YTTLVDIYGQSGRFDDA 564
              L+    + GR  DA
Sbjct: 779 CDNLITGLREEGRSHDA 795



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 204/466 (43%), Gaps = 24/466 (5%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y  + LLN L +  N E A  +            K  E+  A     +++++   C    
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLK----------KFLENGLAPVGVFFNTIVNGYCQV-G 406

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTY 196
            I+ AY  +  ++   L  ++ + Y+ L+      + + EA    ++   + + P   TY
Sbjct: 407 DINKAYTTIEKMEAVGLRPNH-VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--LYK 254
           N LI    R+   ++   ++ +M + G   + I+Y  +I  L +    D+++L+   +  
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCK----DANILEAEVILG 521

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +  + Q+ N +I G   AG    A RF        + P   TY  +I  L   G
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           + +EAE +  E+   GL      YN+L+ GY   G ++ A  +   M++SG+ P  +TY 
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH 641

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI      G     +I  +EM   +  P+  IY+ ++  Y + G+ Q+   +   M++ 
Sbjct: 642 RLIAGCGKEGLVLVEKI-YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQ 700

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++PD   YN +I    K   +H      + M   G+ P T T++ LI  H K   +D A
Sbjct: 701 GIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGA 760

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
              + EM E G+ P  +  + +I  L E+ R  D   +   M  +G
Sbjct: 761 YVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 171/386 (44%), Gaps = 10/386 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++SL+K  C    +++ A   +  + +  +  + E  Y+ LI   GRS   ++ ++    
Sbjct: 430 YNSLVKKFCEM-KNMEEAEKCIKKMVEKGVLPNVET-YNTLIDGYGRSCLFDRCFQILEE 487

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +++ L P  ++Y  LI+   ++ ++ +A  ++  M   G   +   Y+++I       K
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +   + + E+   +I       N +I G  K G   +A          GLS    TY
Sbjct: 548 LKDAF--RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I+  S++G   +A  ++E +K+SG+KP    Y+ L+ G  K G L   E +  EM +
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQ 664

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             ++PD   Y+ LI  Y   G  + A  +   ME    +P+   Y+ ++ G+   G   +
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              ++ +MK  G+ P T  Y+++I    K      A   +  M   G  P     + LI 
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPC 509
              + GR   A+ +  EM  +G   C
Sbjct: 785 GLREEGRSHDADVICSEMNMKGKDDC 810


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 212/453 (46%), Gaps = 23/453 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N LI+       +    ++++K+ + GY  D +  + +I+ L    ++  +L     
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH-- 152

Query: 254 KEIECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                DK+   G  LN V     I G  K GD   A++FL    G    P    Y  +I 
Sbjct: 153 -----DKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A+       EA  +F E+   G+      YN L+ G+  +G LK+A  +++EM    + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           + +TY++L+DA    G+ + A+ VL  M  +  KP+   YS ++ GY    E ++   V 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   GV PD H Y ++I+ F K   +  A+  F  M  + + P  +T+++LID   K 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR     +L +EM++RG      TY+ +I+ L +    +    L   M+ Q + PN+ T+
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L+D   + GR  DA E            F+ + T G   +    N +IN   +     
Sbjct: 448 TILLDGLCKGGRLKDAQE-----------VFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           EA  +L  M++NG  P+  T+ T++ AL + D+
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 188/432 (43%), Gaps = 16/432 (3%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           DD     N M  MR        I ++ ++ S  +     +++   L   +E   I+ D  
Sbjct: 41  DDAVSQFNRMLCMRHTP---PIIQFNKILDSFAKMKHYSTAV--SLSHRLELKGIQPDLI 95

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  F   G  +     L      G  P T T   +I  L   G+  +A    ++L
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G +    +Y  L+ G  K+G  + A   + +++     PD   Y+ +IDA       
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV 215

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  EM V     +   Y+ ++ G+   G+ +    +L EM    + P+ + YN++
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A +    ML   ++PD IT++TL+D +F      +A+ +F  M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY I+IN   + +  ++   L   M  + ++P +VTY++L+D   +SGR    I 
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR----IS 391

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            +  L D+       MR  G     +  +SLI+   ++     A A+   MK+  ++P++
Sbjct: 392 YVWDLIDE-------MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444

Query: 627 VTYTTLMKALIR 638
            T+T L+  L +
Sbjct: 445 FTFTILLDGLCK 456



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 167/394 (42%), Gaps = 37/394 (9%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           LL+Q  +L  ++Y  LI+   +  D   A+  + K+       D + Y+ +I ++ +   
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQL 214

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +    L+ E+    I  D    N +I GF   G   +A+  L       ++P   TY
Sbjct: 215 VSEA--YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++ AL   G+  EA++V   + ++ +KP    Y+ L+ GY  +  +K A+ V + M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 364 SGVLPDEHTY-----------------------------------SLLIDAYANAGRWES 388
            GV PD HTY                                   S LID    +GR   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              ++ EM       +   YS ++ G    G   R   +  +MK   + P+   + +++D
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A   F  +L++G   +  T+N +I+ H K G  + A  +  +M++ G  P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              T+  +I  L +++  +  ++LL  M A+GLL
Sbjct: 513 NAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRS 176
           R  PA +  + SL+  LC  N  +D A A+ + ++   +    +++ +L   L    GR 
Sbjct: 403 RGQPADVITYSSLIDGLCK-NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG-GRL 460

Query: 177 EKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           +   E F  LL++   L   TYN +I+   +   LE+AL ++SKM  +G   +   +  +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 235 IQSLTRTNKIDSSLLQKLYKEI 256
           I +L + ++ D +  +KL +++
Sbjct: 521 IIALFKKDENDKA--EKLLRQM 540


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 208/448 (46%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N LI+       +    ++++K+ + GY    I ++ +I+ L    +++ +L    +
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL--HFH 152

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++    I+ D      +I G  K GD   A++ +    G    P    Y  +I AL   
Sbjct: 153 DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKY 212

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  +F E+   G+      Y  L+ G+     LK+A  +++EM    + P+ +TY
Sbjct: 213 QLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+DA    G+ + A+ VL  M  +  KP+   YS ++ GY    E ++   V   M  
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD H Y ++I+ F K   +  A+  F  M  + + P  +T+++LID   K GR   
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +L +EM++RG      TYN +I+ L +    +    L   M+ QG+ P   T+T L+D
Sbjct: 393 VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLD 452

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR  DA E           AF+ + T G        N +IN   +     EA  +
Sbjct: 453 GLCKGGRLKDAQE-----------AFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTM 501

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           L  M+ENG  P+ VT+  ++ AL + D+
Sbjct: 502 LSKMEENGCVPNAVTFDIIINALFKKDE 529



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 200/434 (46%), Gaps = 8/434 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P  +  ++L N       I   ++V++ + K      + + ++ LI  L    ++ +A  
Sbjct: 92  PDLITLNILINCFCHMGQITFGFSVLAKILKRGY-QPHTITFTTLIKGLCLKGQVNKALH 150

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               LL+Q  +   ++Y  LI+   +  D   A+ L+ K+       +   Y+ +I +L 
Sbjct: 151 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +  +    L+ E+    I  D      +I GF  A    +A+  L       ++P 
Sbjct: 211 KYQLVSEA--YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPN 268

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  ++ AL   G+  EA+ V   + ++ +KP    Y+ L+ GY  +  LK A+ V +
Sbjct: 269 VYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFN 328

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   GV PD H+Y++LI+ +      + A  + KEM   +  P    YS ++ G    G
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                + ++ EM+  G+  +   YN +ID   K   L  A+A F++M  +GI P + T+ 
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            L+D   K GR   A+E F+++  +GY      YN+MIN   +Q   E+   +L  M   
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508

Query: 540 GLLPNVVTYTTLVD 553
           G +PN VT+  +++
Sbjct: 509 GCVPNAVTFDIIIN 522



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 16/432 (3%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           DD     N M  MR        I ++ ++ S  +     +++   L   +E   I+ D  
Sbjct: 41  DDAVSQFNRMLCMRHTP---PIIQFNKILDSFAKIKHYSTAV--SLSHRLELKGIQPDLI 95

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  F   G  +     L      G  P T T+  +I  L   G+  +A    ++L
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G+K    +Y  L+ G  K+G  + A  +V +++     P+   Y+ +IDA       
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  EM       +   Y+ ++ G+    + +    +L EM    + P+ + YN++
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A      ML   ++PD IT++TL+D +F      +A+ +F  M   G 
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGV 335

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   +Y I+IN   + +  ++   L   M  + ++P +VTY++L+D   +SGR    I 
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR----IS 391

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            +  L D+       MR  G+  + +  NSLI+   ++     A A+   MK+ G++P  
Sbjct: 392 YVWDLIDE-------MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCS 444

Query: 627 VTYTTLMKALIR 638
            T+T L+  L +
Sbjct: 445 FTFTILLDGLCK 456


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 241/533 (45%), Gaps = 31/533 (5%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLT 195
           S +     V S +  +  C S  L++ +L+    ++ KL E       L S+   ++   
Sbjct: 162 SGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 221

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
            N+L+    +   ++ A  +  ++ + G   +    +++I +L +  KI+++  +    +
Sbjct: 222 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT--KSFLSD 279

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   +  D    N +I  + + G   +A   +    G GL P   TY A+I  L  +G+
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A+ V +E+ + G+ P T  YN LL    +   + DAE +  EM   GV+PD  ++S 
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI   +  G  + A    ++M+ +   P++ IY+ ++ G+   G      +V  EM   G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              D   YN +++   K   L  A   F  M   G+ PD  T+ TLI+ + K G  ++A 
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            LFE M +R   P   TYN +I+   +    E V  L  +M ++ + PN ++Y  L++ Y
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579

Query: 556 GQSG-------RFDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
              G        +D+ +E                 C  G + +A      M   G+ P  
Sbjct: 580 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 639

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  N+LIN F +++    AFA++  M+ +GL PDV+TY  ++    R  +  +
Sbjct: 640 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 692



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 216/466 (46%), Gaps = 20/466 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  R   L EAF L      + L P   TYNA+I+   +     +A  ++ +M 
Sbjct: 292 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 351

Query: 221 QDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + G   D   Y++++    R  N +D+   ++++ E+    +  D    + +I   +K G
Sbjct: 352 KIGMSPDTATYNILLVECCRNDNMMDA---ERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+++    +  GL+P    Y  +I     +G   EA  V +E+ E G       YN
Sbjct: 409 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 468

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +L G  K   L +A+ + +EM   GV PD +T++ LI+ Y+  G    A  + + M   
Sbjct: 469 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           + KP+   Y+ ++ G+    E ++  ++  +M S  + P+   Y ++I+ +    C+  A
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 588

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +D M+ +G E   IT NT++  + + G   +A+E    M  +G  P   TYN +IN 
Sbjct: 589 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 648

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             ++E  +    L+  M   GLLP+V+TY  +++ + + GR  +A   +  + ++ VN  
Sbjct: 649 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN-- 706

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                    P      SLIN         EAF V   M + G  PD
Sbjct: 707 ---------PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 232/530 (43%), Gaps = 46/530 (8%)

Query: 153 LQKHNLCYSYELLYSIL-----IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARND 207
           L+   LC S     S+L     +  +  + ++Y+  + S  Q +   T N +I+A  +N 
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ-VNVYTLNIMINALCKNQ 268

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            +E   + +S M + G   D + Y+ +I +  R       LL++ ++ ++     + G+ 
Sbjct: 269 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR-----QGLLEEAFELMD----SMSGKG 319

Query: 268 L-------NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           L       N +I G  K G   +A   L     +G+SP TATY  ++     +   ++AE
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +F+E+   G+ P   +++AL+    K G L  A     +M+ +G+ PD   Y++LI  +
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G    A  V  EM       +   Y+ IL G           ++  EM   GV PD 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + +  +I+ + K   ++ A+  F+ M+   ++PD +T+NTLID   K    ++  EL+ +
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M  R  +P   +Y I+IN         +  RL   M  +G    ++T  T+V  Y ++G 
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 561 FDDAIECL----------EGLS--------------DQAVNAFRVMRTDGLKPSNLALNS 596
              A E L          +G++              D+A      M   GL P  +  N 
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++N F    R  EA  ++  M E G+ PD  TYT+L+   +  +   + F
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 729



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 221/529 (41%), Gaps = 50/529 (9%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-------------LT-------PLTYNALISAC 203
           +S +IH L RS +L   +A +L   ++             LT       PL ++ L+   
Sbjct: 135 FSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTY 194

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +   L +       ++  G        + ++  L +   +D  L  ++Y+E+    +++
Sbjct: 195 VQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD--LAWEIYQEVVRSGVQV 252

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +   LN +I    K         FL   +  G+ P   TY  +I A    G   EA  + 
Sbjct: 253 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 312

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS-LLIDAYAN 382
           + +   GLKP    YNA++ G  K G    A+ V+ EM + G+ PD  TY+ LL++   N
Sbjct: 313 DSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN 372

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
               ++ RI   EM      P+   +S ++      G   +  +  ++MK++G+ PD   
Sbjct: 373 DNMMDAERI-FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVI 431

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y ++I  F +   +  A+   D ML +G   D +T+NT+++   K      A+ELF EM 
Sbjct: 432 YTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMT 491

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           ERG FP   T+  +IN   +         L   M  + L P+VVTY TL+D + +    +
Sbjct: 492 ERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME 551

Query: 563 DAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
              E                        C  G   +A   +  M   G + + +  N+++
Sbjct: 552 KVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 611

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             +       +A   L  M   G+ PD +TY TL+   I+ +   + F+
Sbjct: 612 KGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 660



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 17/335 (5%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F  LK  GL     A N+LL G VK+G++  A  +  E+ RSGV  + +T +++I
Sbjct: 202 EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 261

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     + E+ +  L +ME     P+   Y+ ++  Y  +G  +  F+++  M   G++
Sbjct: 262 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK 321

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR---A 494
           P    YN +I+   K      A    D ML  G+ PDT T+N L+    +C R D    A
Sbjct: 322 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDA 378

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E +F+EM  +G  P   +++ +I LL +    +   +   +M+  GL P+ V YT L+  
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI-- 436

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
               G F     C  G+  +A+     M   G     +  N+++N   +++  +EA  + 
Sbjct: 437 ----GGF-----CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 487

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             M E G+ PD  T+TTL+    +    +K  + +
Sbjct: 488 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 154/369 (41%), Gaps = 45/369 (12%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F    S   VP  +  S L  L S N  +D A      ++   L     ++Y+ILI    
Sbjct: 382 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD-NVIYTILIGGFC 440

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R+  + EA      +L Q   L  +TYN +++   +   L +A  L ++M + G   DF 
Sbjct: 441 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 500

Query: 230 NYSLVIQSLTRTNKID---------------------SSLLQKLYKEIECDKIELDGQLL 268
            ++ +I   ++   ++                     ++L+    K  E +K+    +L 
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN---ELW 557

Query: 269 NDVIV---------------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           ND+I                G+   G  S+A R        G      T   ++     +
Sbjct: 558 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 617

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  ++A+     +   G+ P    YN L+ G++K   +  A  +V++ME SG+LPD  TY
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 677

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++++ ++  GR + A +++ +M      P+   Y+ ++ G+  +   +  F+V  EM  
Sbjct: 678 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 737

Query: 434 SGVEPDTHF 442
            G  PD  F
Sbjct: 738 RGFVPDDKF 746



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 48/335 (14%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER-SGVLPDEHTYSLLIDAYANAGRWESA 389
            K   ++++A++   V+   L DA+ V+  M R SGV   E   SL++  Y N G     
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVL-TYGNCG----- 181

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                         N  ++  ++  Y    + +   +  + +KS G+    +  N ++  
Sbjct: 182 -------------SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGG 228

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   +  A   +  ++  G++ +  T N +I+   K  + +  +    +M+E+G FP 
Sbjct: 229 LVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPD 288

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA----- 564
             TYN +IN    Q   E+   L+ +M  +GL P V TY  +++   ++G++  A     
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 348

Query: 565 ------------------IECLEGLSDQAVNAFRV---MRTDGLKPSNLALNSLINAFGE 603
                             +EC    +D  ++A R+   M + G+ P  ++ ++LI    +
Sbjct: 349 EMLKIGMSPDTATYNILLVECCR--NDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +    +A    + MK  GL PD V YT L+    R
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 441



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 54/294 (18%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y FT L+N  S++ N   A  L           F++          +  +L  ++ + N+
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTL-----------FEMM---------IQRNLKPDVVTYNT 539

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNAL 199
            ID              C   E+            EK+ E +  ++S+R     ++Y  L
Sbjct: 540 LID------------GFCKGSEM------------EKVNELWNDMISRRIYPNHISYGIL 575

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN---KIDSSLLQKLYKEI 256
           I+       + +A  L  +M + G+    I  + +++   R     K D  L   L K  
Sbjct: 576 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-- 633

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               I  DG   N +I GF K  +  +A   +   +  GL P   TY  ++   S  GR 
Sbjct: 634 ---GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 690

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            EAE +  ++ E G+ P    Y +L+ G+V    LK+A  V  EM + G +PD+
Sbjct: 691 QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 744


>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 564

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 218/462 (47%), Gaps = 31/462 (6%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            R    ++AL   +  R+DG   D   YS+++ ++ R+ + +  L+  L   +  + +  
Sbjct: 45  GRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLV--LLDVMRSEGVAP 102

Query: 264 DGQLLNDVIVGFAKAGDA--------SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           D       +   AK G           +A+R LG    VGLSP   T+++ + A  N+G+
Sbjct: 103 DHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNAGQ 162

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              A  + +++ E G+ P    ++A +    K G  + A  ++  M  +   P+  TY+ 
Sbjct: 163 WERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTA 222

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            IDA   AG W  A+ +L EM      PN   ++  ++   + G+WQ    +L++M S G
Sbjct: 223 AIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMG 282

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V+P+   Y   +   G  N    A+A  ++M S GI  D +++   ID   + G ++ A 
Sbjct: 283 VQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMAL 342

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L +EM++ G  P   +++  I+  G+ ++W     LL  M   G+ PN V++   +D  
Sbjct: 343 ALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDAC 402

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G++G++  A+  L+ +S           + G+    +  N++I A G+ +  A A +VL+
Sbjct: 403 GRAGQWRAALSLLDKMS-----------SAGVPRGTITYNAVIAACGKGKEWARAVSVLR 451

Query: 616 YM-----KENG-LKP----DVVTYTTLMKALIRVDKFHKVFS 647
            M     K +G + P    DVV+Y+  + A +R  ++ +  S
Sbjct: 452 EMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEAIS 493



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 19/302 (6%)

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           LK   + G  K+A    +     GV+ D +TYS+L+ A A +GRWE   ++L  M     
Sbjct: 41  LKSQGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGV 100

Query: 402 KPNSFIYSRILAGYRDRGEW--------QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            P+ F +   +      G+W        QR  ++L EM + G+ P+   ++  +   G  
Sbjct: 101 APDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNA 160

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A+   D+M  EG+ P+  T++  +    K G++  A  +   M+     P   TY
Sbjct: 161 GQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTY 220

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
              I+  G+   W   + LL  MR +G+ PNV+T+ + +   G  G++ +A+        
Sbjct: 221 TAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEAL-------- 272

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              N  R M + G++P+  +  + + A G++ R A A AV + M+  G++ D V++T  +
Sbjct: 273 ---NLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAI 329

Query: 634 KA 635
            A
Sbjct: 330 DA 331



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 165/375 (44%), Gaps = 27/375 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+++ ++AC      E+AL L+ +M ++G   +   +S  + +  +  +   +L   + +
Sbjct: 149 TFSSAVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPAL--TILR 206

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +       + Q     I    KAG+   A   L   +  G++P   T+ + I+AL N G
Sbjct: 207 RMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGG 266

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +  ++   G++P   +Y A +           A  V  +M   G+  DE +++
Sbjct: 267 QWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFT 326

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             IDA A  G WE A  +L EM      P    +S  ++      +W R   +L+EM+  
Sbjct: 327 AAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEV 386

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV P+   +N  ID  G+      A++  D+M S G+   TIT+N +I    K   + RA
Sbjct: 387 GVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWARA 446

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             +  EM                 L G+        +  G+M A   + +VV+Y+  +D 
Sbjct: 447 VSVLREM-----------------LAGQ-------AKTDGDM-APVPMADVVSYSAAIDA 481

Query: 555 YGQSGRFDDAIECLE 569
             ++G +++AI  +E
Sbjct: 482 CVRAGEWEEAISLVE 496



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 138/352 (39%), Gaps = 52/352 (14%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMS 217
           E  +S  + A G++ +   A  + +R R         TY A I AC +  +   A  L++
Sbjct: 182 EFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLA 241

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +MR+ G   + I +                                     N  I     
Sbjct: 242 EMREKGVAPNVITF-------------------------------------NSAISALGN 264

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A+  L     +G+ P   +Y A +TA  ++ R   A AV E+++  G++    +
Sbjct: 265 GGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVS 324

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           + A +    + G  + A  ++ EM   G+ P   ++S  I A     +W  A  +L+EME
Sbjct: 325 FTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREME 384

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN   ++  +      G+W+    +L +M S+GV   T  YN +I   GK     
Sbjct: 385 EVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITYNAVIAACGKGKEWA 444

Query: 458 HAMAAFDRMLSEGIE----------PDTITWNTLIDCHFKCGRYDRAEELFE 499
            A++    ML+   +           D ++++  ID   + G ++ A  L E
Sbjct: 445 RAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWEEAISLVE 496


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 221/486 (45%), Gaps = 40/486 (8%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           R+  +T N LI         + A++++  +M + GY  D  +Y+ +I+ L    K   +L
Sbjct: 126 RVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 185

Query: 249 LQKLYKEIECDKIELDGQL--------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              L+       +  DG           + +I GF K G+  KA        G G  P  
Sbjct: 186 ELLLH-------MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDV 238

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY+++I  L  +    +AEA+ + + + G+ P T+ YN +++GY  +G L++A  ++ +
Sbjct: 239 VTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK 298

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  SG+ PD  TY LLI  Y   GR   AR V   M     KPNS IY  +L GY  +G 
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L  M   G+  +   +N++I  + K+  +  AM AF  M   G+ PD ++++T
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 418

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K GR + A   F +M   G  P   ++  +I+ L     W+ V+ L   M  +G
Sbjct: 419 VIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 478

Query: 541 LLPNVVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEGLSDQAV 576
           + P+ +   T++D   + GR       FD  I                  C  G  D+++
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESI 538

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  M + GL+P +   N+L+N + ++ R  +A A+ + M    +K   +T   ++  L
Sbjct: 539 KQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598

Query: 637 IRVDKF 642
            +  + 
Sbjct: 599 FQAGRI 604



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 243/578 (42%), Gaps = 76/578 (13%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           + L+K LC    + D    V   + +  L Y+ ++  Y+ LI  L   +K  EA  L   
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPE--LGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190

Query: 189 Q------RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                    +P  ++Y+ +I    +  +++KA  L  +M   G+  D + YS +I  L +
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
              ++ +  +LQ ++ +     +  + +  N +I G+   G   +A+R L    G GL P
Sbjct: 251 AQAMNKAEAILQHMFDK----GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP 306

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD----- 353
              TY  +I      GR  EA +VF+ +   G KP +  Y+ LL GY   G L D     
Sbjct: 307 DVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 366

Query: 354 ------------------------------AEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
                                         A    +EM ++G+ PD  +YS +I      
Sbjct: 367 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKI 426

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR E A     +M      PN   ++ ++ G    GEW++  ++  EM + G+ PD  F 
Sbjct: 427 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 486

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N ++D   K   +  A   FD ++  G++P+ +++NTLID +   G+ D + + F+ M  
Sbjct: 487 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS 546

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P + TYN ++N   +  R ED   L   M  + +    +T   ++    Q+GR   
Sbjct: 547 IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVA 606

Query: 564 AIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A E                        C     D+A+  F  +R+   +      N +IN
Sbjct: 607 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVIN 666

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           A  +  R  EA ++   M   G  P V+TY+ ++K+ I
Sbjct: 667 ALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRI 704



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 165/356 (46%), Gaps = 15/356 (4%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           +G   +  T   +I  L +  RT +A + VF  + E G  P   +YNAL+KG       +
Sbjct: 123 MGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQ 182

Query: 353 DAEFVVSEMERSG---VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
           +A  ++  M   G     P+  +YS +ID +   G  + A  +  EM      P+   YS
Sbjct: 183 EALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYS 242

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G        +   +L+ M   GV P+T  YN+MI  +     L  A+    +M   
Sbjct: 243 SLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 302

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++PD +T+  LI  + K GR   A  +F+ M  +G  P +T Y+I+++    +    DV
Sbjct: 303 GLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 362

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           + LL  M   G+      +  L+  Y + G  D           +A+ AF  MR +GL+P
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD-----------KAMTAFTEMRQNGLRP 411

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             ++ +++I+   +  R  +A      M   GL P+++++T+L+  L  + ++ KV
Sbjct: 412 DVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKV 467



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 7/381 (1%)

Query: 165 LYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y IL+H       L +       ++          +N LI A A++  ++KA+   ++M
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ+G   D ++YS VI  L +  +++ ++    + ++  + +  +      +I G    G
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYH--FNQMVSEGLSPNIISFTSLIHGLCSIG 462

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +  K           G+ P       ++  L   GR +EA+  F+ +   G+KP   +YN
Sbjct: 463 EWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYN 522

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY  +G + ++      M   G+ PD  TY+ L++ Y   GR E A  + +EM   
Sbjct: 523 TLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             K  +   + IL G    G      ++  +M   G +     YN ++    + +C+  A
Sbjct: 583 DVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEA 642

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  F+ + S+  E D  T+N +I+   K GR D A+ LF  M  RG  P   TY++MI  
Sbjct: 643 LRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKS 702

Query: 520 LGEQERWEDVKRLLGNMRAQG 540
             E+   E+   L  +M   G
Sbjct: 703 RIEEGLLEESDDLFLSMEKNG 723



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 131/552 (23%), Positives = 222/552 (40%), Gaps = 85/552 (15%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L +++ + +A  + Q    + + P   TYN +I        LE+A+ L+ KM 
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300

Query: 221 QDGYHCDFINYSLVIQ----------------SLTRTNKIDSSLL--------------- 249
             G   D + Y L+IQ                S+ R  +  +S +               
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 360

Query: 250 --QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
             + L   +  D I  + +  N +I  +AK G   KAM      +  GL P   +Y+ VI
Sbjct: 361 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 420

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L   GR  +A   F ++   GL P   ++ +L+ G   +G  K  E +  EM   G+ 
Sbjct: 421 HILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIH 480

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD    + ++D     GR   A+     +     KPN   Y+ ++ GY   G+   + + 
Sbjct: 481 PDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ 540

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M S G+ PD+  YN +++ + K   +  A+A +  M  + ++   IT N ++   F+
Sbjct: 541 FDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQ 600

Query: 488 CGRYDRAEELFEEMQERGY----------------FPCTT-------------------T 512
            GR   A EL+ +M +RG                   C                     T
Sbjct: 601 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWT 660

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +NI+IN L +  R ++ K L   M  +G +P+V+TY+ ++            IE  EGL 
Sbjct: 661 FNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI---------KSRIE--EGLL 709

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           +++ + F  M  +G    +  LN +I    E      A   L  + E     +  T   L
Sbjct: 710 EESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEAST-AAL 768

Query: 633 MKALIRVDKFHK 644
           +  ++   K+ K
Sbjct: 769 LIPIVSEKKYQK 780


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 18/460 (3%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH L  +    +A  L +   R     +P+TYN +I A  +   LE+A +L+ KM 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG+  D + Y+ V+  L ++++++ +LL  L+ E+E      + +  N +I+G  +   
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALL--LFNEMERLGCTPNRRSHNTIILGLCQQSK 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +     +   + P + +Y  +I  L+ +G+  EA  +F+ + +SG+ P    YN 
Sbjct: 166 IDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNV 225

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G      L +A  +   M   G  P   T+++LIDA+   G+ + A  +LK M    
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS +++G            +L++M     +P     N +I    K   +  A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D M+S G  PD +T+NTL+  H + G+ +RA EL  +M  RG  P   TY  +++ L
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  R  +   +   M++ G  PN+ TYT L+  +  +G+ D  ++            F 
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK-----------LFG 454

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            M   G+ P ++   +L     +  R A A  +L+  +E+
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 183/376 (48%), Gaps = 15/376 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G AKAG  + A          G++P T  Y ++I  L  +    +A  +F ++   G
Sbjct: 16  LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    YN ++    K G L++A  ++ +M   G +PD  TY+ ++D    + R E A 
Sbjct: 76  CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++  EME     PN   ++ I+ G   + +  +  QV  EM++  + PD+  Y ++ID  
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY--DRAEELFEEMQERGYFP 508
            K   L+ A   F RML  GI P  +T+N +I  H  C  Y  D A ELF+ M+ +G  P
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI--HGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+NI+I+   ++ + ++  RLL  M   G +P+VVTY+TL+       R DDA   L
Sbjct: 254 SRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E +  +             KP+ +  N+LI+   +  R  EA  VL  M  +G  PDVVT
Sbjct: 314 EDMVKRQC-----------KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 629 YTTLMKALIRVDKFHK 644
           Y TL+    R  +  +
Sbjct: 363 YNTLVHGHCRAGQTER 378



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 156/318 (49%), Gaps = 14/318 (4%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P + +Y  L+ G  K G L DA  +  ++  SGV P    Y+ LI     A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++ AR +  +M      P+   Y+ ++     RG  +    ++K+M   G  PD   YN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D   K + +  A+  F+ M   G  P+  + NT+I    +  + D+A ++F EM+ + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P + +Y I+I+ L +  +  +  +L   M   G+ P+ VTY  +  I+G         
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV--IHGM-------- 230

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            CL    D+A+  F+ MR+ G +PS    N LI+A  +  +  EAF +L+ M ++G  PD
Sbjct: 231 -CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289

Query: 626 VVTYTTLMKALI---RVD 640
           VVTY+TL+  L    RVD
Sbjct: 290 VVTYSTLISGLCSIARVD 307



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 141/356 (39%), Gaps = 46/356 (12%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           C      ++ILI A  +  KL EAF                               L+ +
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAF------------------------------RLLKR 280

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           M  DG+  D + YS +I  L    ++D +  LL+ + K  +C    +     N +I G  
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR-QCKPTVVT---QNTLIHGLC 336

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KAG   +A   L      G SP   TY  ++     +G+T  A  +  ++   GL P   
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y AL+ G  K   L +A  V ++M+ SG  P+  TY+ LI  + +AG+ +    +  EM
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS------GVEPDTHFYNVMIDTF 450
             +   P+  +Y  + A     G   R  ++L+E + S      G E     Y   +D  
Sbjct: 457 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE----VYRFAVDGL 512

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
            +   +  A+     M+  G  P      +L+    K G+   A  + EE+ +  Y
Sbjct: 513 LEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 568



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 54/255 (21%)

Query: 130 HSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAF 183
           ++L+  LC +     + ++  A+VS  Q  ++     + Y+ L+H     G++E+  E  
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV-----VTYNTLVHGHCRAGQTERARELL 383

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
                + L P  +TY AL+S   + + L +A  + ++M+  G   +   Y+ +I      
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG------------ 289
            ++D  L  KL+ E+ C  I  D  +   +     K+G +++A+  L             
Sbjct: 444 GQVDGGL--KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 501

Query: 290 ------------------MAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                             MA G        G  P     A+++  L  SG+  EA AV E
Sbjct: 502 DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561

Query: 325 ELKE--SGLKPRTKA 337
           E+ +   G K R KA
Sbjct: 562 EIMDLAYGGKARGKA 576


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 211/450 (46%), Gaps = 15/450 (3%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L+P   TYN +I   AR  DLE A +L  +M+  G   D + Y+ +I    +   +  ++
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              +++E++    E D    N +I  F K     +A  +L   +  GL P   TY+ +I 
Sbjct: 307 --SVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A   +G  +EA   F ++   GL+P    Y +L+    K+G L +A  + SEM+++GV  
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ L+D     GR   A  +   +  +    N  IY+ +  GY      ++   +L
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +EM    ++PD   Y   I    + N +  +MA    M+  G+  ++  + TLID +FK 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+   A  L +EMQ+ G      TY ++I+ L +    +   R   +M   GL PN++ Y
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIY 604

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L+D   ++       +CLE    +A N F  M   G+ P  L   SLI+   +     
Sbjct: 605 TALIDGLCKN-------DCLE----EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPG 653

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           EA ++   M E G++ D+  YT+L+    R
Sbjct: 654 EALSLRNRMVEIGMELDLCAYTSLIWGFSR 683



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 176/424 (41%), Gaps = 59/424 (13%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N+++   +K+     A+ F       GLSP   TY  VI  L+  G    A ++FEE+K 
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKA 279

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P    YN+L+ GY K+G L  A  V  EM+ +G  PD  TY+ LI+ +    R   
Sbjct: 280 KGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQ 339

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   L  M+    +PN   YS ++  +   G      +   +M   G++P+   Y  +ID
Sbjct: 340 AFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF---------- 498
              K   L+ A      M   G+  + +T+  L+D   + GR   AEELF          
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459

Query: 499 -------------------------EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
                                    EEM ++   P    Y   I  L  Q   ED   ++
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------ 569
             M   GL  N   YTTL+D Y + G+  +A+  L+                        
Sbjct: 520 REMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKI 579

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           GL  QAV  F  M  +GL+P+ +   +LI+   ++    EA  +   M + G+ PD + Y
Sbjct: 580 GLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVY 639

Query: 630 TTLM 633
           T+L+
Sbjct: 640 TSLI 643



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 151/331 (45%), Gaps = 24/331 (7%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    ++ L    V +G L++A     +M +  VLP   + + L+   + + +   A  
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
             K+M V+   P+ F Y+ ++      G+ +    + +EMK+ G+ PD   YN +ID +G
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A++ F+ M   G EPD IT+N+LI+C  K  R  +A E    M++RG  P   
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----- 566
           TY+ +I+   +     +  +   +M   GL PN  TYT+L+D   + G  ++A +     
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 567 -------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                              C +G   +A   F  +   G   +     SL + + + +  
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +A  +L+ M +  LKPD++ Y T +  L R
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCR 508



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI A  ++  L EA   F+   R  L P   TY +LI A  +  DL +A  L S+M+
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G + + + Y+ ++  L    ++  +  ++L+  +      L+ Q+   +  G+ KA  
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREA--EELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 281 ASKAMRFL--------------------GMAQ---------------GVGLSPKTATYAA 305
             KAM  L                    G+ +                 GL+  +  Y  
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I A    G+T EA  + +E+++ G+K     Y  L+ G  K+G ++ A      M R+G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P+   Y+ LID        E A+ +  EM      P+  +Y+ ++ G    G      
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +   M   G+E D   Y  +I  F +Y  +  A +  D ML +GI PD +    L+  +
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKY 716

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           ++ G  + A  L ++M  RG    T    +
Sbjct: 717 YELGDINEALALHDDMARRGLISGTIDITV 746



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 11/246 (4%)

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P   ++  +     D G  +   Q   +M    V P     N ++    K +    A+
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + F  M+  G+ P   T+N +I C  + G  + A  LFEEM+ +G  P   TYN +I+  
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+         +   M+  G  P+V+TY +L++ + +  R   A E L G          
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHG---------- 346

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M+  GL+P+ +  ++LI+AF +     EA      M   GL+P+  TYT+L+ A  ++ 
Sbjct: 347 -MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405

Query: 641 KFHKVF 646
             ++ F
Sbjct: 406 DLNEAF 411



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 125/277 (45%), Gaps = 7/277 (2%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y+ L H   +++ + +A  + +   ++ L P  L Y   I    R +++E ++ ++ +M
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   +   Y+ +I +  +  K   ++   L +E++   I++       +I G  K G
Sbjct: 523 MDCGLTANSYIYTTLIDAYFKVGKTTEAV--NLLQEMQDLGIKITVVTYGVLIDGLCKIG 580

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+R+       GL P    Y A+I  L  +    EA+ +F E+ + G+ P    Y 
Sbjct: 581 LVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYT 640

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G +K G   +A  + + M   G+  D   Y+ LI  ++  G+ + A+ +L EM   
Sbjct: 641 SLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRK 700

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
              P+  +   +L  Y + G+      +  +M   G+
Sbjct: 701 GIIPDQVLCICLLRKYYELGDINEALALHDDMARRGL 737


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 224/484 (46%), Gaps = 45/484 (9%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS----S 247
           +P+ +N+L+ A  R+ D   A  L+ KM   GY   ++ Y+++I  +  T  + S     
Sbjct: 10  SPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIG 69

Query: 248 LLQKLYKEIECDKIELDGQLLNDV-IVGFAKA----GDASKAMRFLGMAQGVGLSPKTAT 302
           L ++ Y E+    +E+ G +LN V +  F +     G   KA   +      G  P ++T
Sbjct: 70  LAERAYNEM----LEM-GVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+ VI  L N+ +  +A  +F+E+K +G+ P    Y  LL  + K+G ++ A     EM+
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           + G  P+  TY+ LI AY    +   A  + + M  +   PN   Y+ ++ G+   GE +
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 423 RTFQVLKEMKSSGV-----------------EPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
           +  Q+   MK+  V                 EP+   Y  ++D   K + +  A    + 
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLET 304

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M  EG EP+ I ++ LID   K G+ D A+E+F +M   G  P   TY+ +I+ L + +R
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            +   ++L  M      PNVV YT +VD   + G+           +D+A     +M   
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK-----------TDEAYRLMLMMEEK 413

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK---ALIRVDKF 642
           G  P+ +   ++I+ FG+  R      +LQ M   G  P+ +TY  L+    A   +D  
Sbjct: 414 GCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDA 473

Query: 643 HKVF 646
           HK+ 
Sbjct: 474 HKLL 477



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 223/503 (44%), Gaps = 38/503 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AF L Q   R  +TP   TY  L+    +   +E+A N   +M+
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           QDG   + + Y+ +I +  +T K+  +   ++++ +  +    +      +I G  KAG+
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRA--NEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 281 ASKAMRFLGMAQGVGLS-----------------PKTATYAAVITALSNSGRTIEAEAVF 323
             KA +     +   +                  P   TY A++  L  + +  EA  + 
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E +   G +P    Y+AL+ G+ K+G L +A+ V ++M   G  P+ +TYS LID     
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            R + A  VL +M  +   PN  IY+ ++ G    G+    ++++  M+  G  P+   Y
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
             MID FGK   +   +     M S+G  P+ IT+  LI+     G  D A +L EEM++
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
             +      Y  +I   G    +     LL  +   G +P +  Y  L+D + ++GR + 
Sbjct: 483 TYWPKHIGMYRKVIE--GFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEM 540

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E  E LS     +F     +          SLI +     +  +AF +   M   G  
Sbjct: 541 ALELHEELS-----SFSAAYQN-------TYVSLIESLTLACKVDKAFKLYSDMTRRGFV 588

Query: 624 PDVVTYTTLMKALIRVDKFHKVF 646
           P++     L+K L+RV K+ +  
Sbjct: 589 PELSMLVCLIKGLLRVGKWEEAL 611



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 155/339 (45%), Gaps = 21/339 (6%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P    +N+L+  Y + G    A  ++ +M   G  P    Y++LI    +     S 
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 390 RIV---------LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
            ++         + EM V   K N   ++R L      G++++ + V++EM S G  PD+
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCI---GKFEKAYNVIREMMSKGFIPDS 122

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             Y+ +I      + +  A   F  M   GI PD  T+ TL+D   K G  ++A   F+E
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           MQ+ G  P   TY  +I+   +  +      +   M + G +PN+VTYT L+D + ++G 
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 561 FDDAIECLEGLSDQAVNA------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
            + A +    + +  V+       FR++ ++  +P+ +   +L++   +  +  EA  +L
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYL 650
           + M   G +P+ + Y  L+    +V K     +VF+  L
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 170/423 (40%), Gaps = 60/423 (14%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIHA  ++ KL  A      +LS       +TY ALI    +  + EKA  + ++M+
Sbjct: 195 YTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMK 254

Query: 221 QDGYHC-----------------DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            D                     + + Y  ++  L + +K+  +  + L + +  +  E 
Sbjct: 255 NDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA--RDLLETMSLEGCEP 312

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +  + + +I GF K G   +A        G G SP   TY+++I  L    R   A  V 
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            ++ E+   P    Y  ++ G  K+G   +A  ++  ME  G  P+  TY+ +ID +  A
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKA 432

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRIL------AGYRDRG------------------ 419
           GR +    +L+ M      PN FI  R+L      AG  D                    
Sbjct: 433 GRVDRCLELLQLMTSKGCAPN-FITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491

Query: 420 ----------EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
                     E+  +  +L E+   G  P    Y ++ID F K   L  A+   + + S 
Sbjct: 492 YRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
                  T+ +LI+      + D+A +L+ +M  RG+ P  +    +I  L    +WE+ 
Sbjct: 552 SAAYQN-TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610

Query: 530 KRL 532
            +L
Sbjct: 611 LQL 613



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 23/186 (12%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M++EG  P  + +N+L+  + + G Y  A +L ++M   GY P    YNI+I  +   E 
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 526 WEDV------KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              +      +R    M   G++ N V            G+F           ++A N  
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKF-----------EKAYNVI 110

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           R M + G  P +   + +I       +  +AF + Q MK NG+ PDV TYTTL+      
Sbjct: 111 REMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLL------ 164

Query: 640 DKFHKV 645
           D+F KV
Sbjct: 165 DRFCKV 170


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 242/526 (46%), Gaps = 26/526 (4%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPL 194
           N+ ++ A++V + + K   C   E+ Y+ LIH L    ++ E   + ++ R      T  
Sbjct: 17  NNDVNSAFSVFNMMPKKG-CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  ++ A   +    +A+NL S+MR+ G   +   Y+++I ++ +  K++    +++  
Sbjct: 76  TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG--RRILD 133

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +       N +I G+ K G    A   L +      +P   TY  +I       
Sbjct: 134 EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKK 193

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A A+  ++ ES L P    YN+L+ G  K+GYL  A  +++ M  +GV+PD+ TYS
Sbjct: 194 NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYS 253

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           + ID     GR E A ++   ++    K N  IY+ ++ GY   G+      +L  M + 
Sbjct: 254 VFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              P++  YN +ID   K   +  A+   + M+ +G++    T+  LI    K G +D A
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYA 373

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + ++M   GY P    Y   I+    +   ++ + ++  M  +G++P+ +TYT ++D 
Sbjct: 374 HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDA 433

Query: 555 YGQSGRFDDAIECLEGLSDQAVN----AFRVMRTDGLKP------SNLAL-NSLINAFGE 603
           YG  G  + A + L+ + D   +     +  +    LK        N+AL +S+ N F  
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFA 493

Query: 604 DQRDA-------EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           D  D         A  + + M E+G  P++ TY  L+  L +V + 
Sbjct: 494 DVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 220/544 (40%), Gaps = 86/544 (15%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQ--RQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y+++I+A+ +  KL E   +L +   + L P   TYNALI    +   +E A  ++  M 
Sbjct: 112 YTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMH 171

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +  + +   Y+ +I    R   +  +  LL K+ +     ++       N +I G  K 
Sbjct: 172 SNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES----RLTPSVVTYNSLIHGQCKI 227

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R L +    G+ P   TY+  I  L   GR  EA  +F  LKE G+K     Y
Sbjct: 228 GYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIY 287

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID-------------------- 378
            AL+ GY K G + DA  ++  M     LP+  TY+ LID                    
Sbjct: 288 TALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQ 347

Query: 379 ---------------AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                          A    G ++ A  +L +M  S  +P+ +IY+  +  +  RG  + 
Sbjct: 348 KGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKE 407

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              ++  M   GV PD   Y ++ID +G    L+ A     RM   G +P   T++ LI 
Sbjct: 408 AEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK 467

Query: 484 ----------------CH-------------FKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                           C              +K  +++ A ELFE+M E G  P   TY 
Sbjct: 468 HLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYA 527

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I  L +  R    ++L  +M  +G+ P+   Y +L++   + G + DA+        +
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAV--------R 579

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            V A   M   G  P   +LN L     E+    +A  V   + + G   D V +  L+ 
Sbjct: 580 LVGA---MMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILID 636

Query: 635 ALIR 638
            L++
Sbjct: 637 GLLK 640



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 215/526 (40%), Gaps = 73/526 (13%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           R+  ++ E       P +++L+   C     ++ A  ++  L   N C   E  Y+ LI 
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKE-GMVEAAQEILD-LMHSNSCNPNERTYNELIC 187

Query: 172 ALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
              R + ++ A  LLS+    RLTP  +TYN+LI    +   L+ A  L++ M ++G   
Sbjct: 188 GFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVP 247

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D   YS+ I +L +  +I+ +    L+  ++   I+ +  +   +I G+ KAG    A  
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEA--NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK-------------- 332
            L         P ++TY A+I  L    +  EA  + E + + GLK              
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365

Query: 333 ---------------------PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                                P    Y A +  +   G +K+AE ++S M   GV+PD  
Sbjct: 366 KEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA---------GYRDRG--- 419
           TY+L+IDAY   G    A  VLK M  +   P+   YS ++           Y++     
Sbjct: 426 TYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCD 485

Query: 420 -----------------EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
                            +++   ++ ++M   G  P+ + Y  +I    K   L  A   
Sbjct: 486 SIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKL 545

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           FD M   G+ P    +N+L++C  + G Y  A  L   M E G+ P   + N++   L E
Sbjct: 546 FDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYE 605

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
           +   E  K +  N+   G   + V +  L+D   ++G  D   E L
Sbjct: 606 EGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELL 651



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/429 (22%), Positives = 164/429 (38%), Gaps = 37/429 (8%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
            VP    +S+  +       I+ A  + + L++  +  + E++Y+ LI    ++ K+ +A
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI-KANEVIYTALIDGYCKAGKMDDA 303

Query: 183 FLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             L  R           TYNALI    +   +++AL LM  M Q G  C    Y+++I +
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           + +    D +   ++  ++     + D  +    I  F   G+  +A   + M    G+ 
Sbjct: 364 MLKEGDFDYA--HRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK---------- 347
           P   TY  VI A    G    A  V + + ++G  P    Y+ L+K  +K          
Sbjct: 422 PDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481

Query: 348 -------------------MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
                              M   + A  +  +M   G  P+ +TY+ LI      GR   
Sbjct: 482 ALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A+ +   M      P+  IY+ +L    + G +    +++  M   G  P     NV+  
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +      A   F  +L  G   D + W  LID   K G  D   EL   M+ RG   
Sbjct: 602 GLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQI 661

Query: 509 CTTTYNIMI 517
              TY ++I
Sbjct: 662 HPQTYRMLI 670



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 11/194 (5%)

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           N ++ A + F+ M  +G   + +++  LI    + GR D    +F++M+E   +P   TY
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            ++++ L E  R  +   L   MR +G  PN+ TYT +++   +  + ++    L+ + +
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +           GL PS    N+LI+ + ++     A  +L  M  N   P+  TY  L+
Sbjct: 138 K-----------GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186

Query: 634 KALIRVDKFHKVFS 647
               R    H+  +
Sbjct: 187 CGFCRKKNVHRAMA 200



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 119/296 (40%), Gaps = 27/296 (9%)

Query: 165 LYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y+  IHA      + EA      +  +      LTY  +I A      L  A +++ +M
Sbjct: 391 IYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE-CDKIELDGQLLNDVIVGFAKA 278
              G       YS +I+ L +        L K YK +  CD I           V FA  
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEE------LTKKYKNVALCDSIP---------NVFFADV 495

Query: 279 GDASKAMRF---LGMAQGV---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
            D  K M+F   L + + +   G SP   TYA +I  L   GR   A+ +F+ + E G+ 
Sbjct: 496 ADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    YN+LL    ++G   DA  +V  M   G LP   + ++L       G  E A++V
Sbjct: 556 PSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVV 615

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +       +   +  ++ G    G      ++L  M++ G +     Y ++I+
Sbjct: 616 FSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIE 671


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 197/418 (47%), Gaps = 18/418 (4%)

Query: 175 RSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           R  + Y+ F   LL Q      +TYN LI    +  D+E+A  L+++M++ G+  D + +
Sbjct: 84  RHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTH 143

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++Q+L  T  + S  +Q   + +EC     D  L N ++ G  KA   S+A + +   
Sbjct: 144 SSIVQALCNTGNL-SRAMQYFRESVECAP---DSVLFNILVHGLCKANQLSEARQMIEEM 199

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G+ P   TY ++I  L  S R  EA  + E + +  ++P    YN L+ GY K G  
Sbjct: 200 SERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT 259

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  ++  M +SG  PD  T++ LI  +    + + A  VL  M+     PN   Y+ +
Sbjct: 260 GLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           ++G  D G      ++L EM   G+ PD   YN +I  F +   +  A    + M+  G+
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD I++ TL     K  R+D A  L + M + G  P   T+N ++  L    R ++ + 
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           LL  MR  G  P   TY  LV    ++GR DDA E L            +M ++G++P
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLV-----------MMVSEGIQP 486



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 182/397 (45%), Gaps = 16/397 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I GF KAGD  +A + L   +  G SP   T+++++ AL N+G    A   F E  E
Sbjct: 109 NTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE 168

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
               P +  +N L+ G  K   L +A  ++ EM   G++PD  TY+ LID    + R E 
Sbjct: 169 CA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEE 226

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           AR +L+ M     +PN   Y+ ++ GY   G      Q+++ M  SG  PD   +N +I 
Sbjct: 227 ARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLIS 286

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            F + + +  A      M      P+ +T+N LI      GR + A EL  EM  RG  P
Sbjct: 287 GFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN +I +     + E   ++   M  +G++P+ ++Y TL     +S RFD+A   L
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           + + D            G  P+    NSL+      +R  EA  +L  M+  G  P   T
Sbjct: 407 DNMFDA-----------GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAAST 455

Query: 629 YTTLMKALI---RVDKFHKVFSSYLFFNIYKMLSYSG 662
           Y  L+  L    RVD   +V    +   I  ++S SG
Sbjct: 456 YEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSG 492



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 184/402 (45%), Gaps = 12/402 (2%)

Query: 125 PAPLWHS-LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           P  + HS +++ LC++    +L+ A+  + ++   C    +L++IL+H L ++ +L EA 
Sbjct: 138 PDVVTHSSIVQALCNTG---NLSRAM-QYFRESVECAPDSVLFNILVHGLCKANQLSEAR 193

Query: 184 LLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
            + +    + + P  +TYN+LI    ++  +E+A  L+  M +     + + Y+ +I   
Sbjct: 194 QMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGY 253

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +T    + L  +L + +       D    N +I GF +     KA   L + +    +P
Sbjct: 254 CKTGC--TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAP 311

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I+ L ++GR  EA  +  E+   G+ P    YN+L+  + +   ++ A  + 
Sbjct: 312 NLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQ 371

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           + M   GV+PD  +Y  L  A   + R++ A  +L  M  + A PN F ++ ++ G    
Sbjct: 372 NLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCS 431

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
                   +L  M+  G +P    Y V++    K   +  A      M+SEGI+P   + 
Sbjct: 432 RRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSS 491

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            T++    + G+ D A   F+++       C  +Y  ++  +
Sbjct: 492 GTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFV 533


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 219/469 (46%), Gaps = 18/469 (3%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
           YSIL+  L +++++ +A+  L    ++  P   + YN LI +      L KA+ +   M 
Sbjct: 325 YSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMV 384

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G       Y+ +I+   ++ + D  + ++L KE+      ++      VI        
Sbjct: 385 SKGLSLTSSTYNTLIKGYCKSGQAD--IAERLLKEMLSIGFNVNQGSFTSVICLLCSHHM 442

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+RF+G      +SP       +I+ L   G+  +A  ++ +    G    TK  NA
Sbjct: 443 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNA 502

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  + G L++   +  E+   G + D  +Y+ LI       + + A + + EM    
Sbjct: 503 LLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG 562

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+++ YS ++ G  +  + +   Q   + K +G+ PD + Y+VMID   K        
Sbjct: 563 LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQ 622

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M+S  ++P+T+ +N LI  + + GR   A EL E+M+ +G  P + TY  +I  +
Sbjct: 623 KLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 682

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               R E+ K LL  MR +GL PNV  YT L+D YG+ G+    +ECL           R
Sbjct: 683 SIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL----------LR 731

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            M +  + P+ +    +I  +  D    EA  +L  M+E G+ PD +TY
Sbjct: 732 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 215/475 (45%), Gaps = 43/475 (9%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
           P  + +S+L    +    I  AY V+  + +     +  ++Y+ LI +L  +  L +A  
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNV-IVYNNLIDSLIEAGSLNKAIE 378

Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++S+   LT  TYN LI    ++   + A  L+ +M   G++ +  +++ VI  L 
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLC 438

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA----MRFL------- 288
             +  DS+L  +   E+    +   G LL  +I G  K G  SKA    ++FL       
Sbjct: 439 SHHMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVD 496

Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                    G+ +               G G      +Y  +I+    + +  EA    +
Sbjct: 497 TKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMD 556

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+ + GLKP    Y+ L++G + M  +++A     + +R+G++PD +TYS++ID    A 
Sbjct: 557 EMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAE 616

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R E  + +  EM  ++ +PN+ +Y+ ++  Y   G      ++ ++MK  G+ P++  Y 
Sbjct: 617 RTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYT 676

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I      + +  A    + M  EG+EP+   +  LID + K G+  + E L  EM  +
Sbjct: 677 SLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 736

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
              P   TY +MI          +  RLL  MR +G++P+ +TY   +  Y + G
Sbjct: 737 NVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQG 791



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 212/491 (43%), Gaps = 28/491 (5%)

Query: 165 LYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           L++  I+A    G+ E+  E F   +   + P  +TYN +I     +   ++A     KM
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G     I YS++++ LT+  +I  +    + KE+       +  + N++I    +AG
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYC--VLKEMTEKGFPPNVIVYNNLIDSLIEAG 371

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA+    +    GLS  ++TY  +I     SG+   AE + +E+   G      ++ 
Sbjct: 372 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFT 431

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RIVLK 394
           +++           A   V EM    + P     + LI      G+   A     + + K
Sbjct: 432 SVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNK 491

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
              V     N+ ++     G  + G+ +  F++ KE+   G   D   YN +I       
Sbjct: 492 GFLVDTKTSNALLH-----GLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNK 546

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A    D M+ +G++PD  T++ LI       + + A + + + +  G  P   TY+
Sbjct: 547 KLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYS 606

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           +MI+   + ER E+ ++L   M +  L PN V Y  L+  Y +SGR   A+E  E     
Sbjct: 607 VMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED---- 662

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                  M+  G+ P++    SLI       R  EA  +L+ M+  GL+P+V  YT L+ 
Sbjct: 663 -------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALID 715

Query: 635 ALIRVDKFHKV 645
              ++ +  KV
Sbjct: 716 GYGKLGQMVKV 726



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 170/387 (43%), Gaps = 13/387 (3%)

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           + C  +  D  L    I  F K G   +A+      +  G+ P   TY  VI  L  SGR
Sbjct: 243 VVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA    E++ E G++P    Y+ L+KG  K   + DA  V+ EM   G  P+   Y+ 
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362

Query: 376 LIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           LID+   AG    A I +K++ VS      S  Y+ ++ GY   G+     ++LKEM S 
Sbjct: 363 LIDSLIEAGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSI 421

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G   +   +  +I     ++    A+     ML   + P      TLI    K G++ +A
Sbjct: 422 GFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 481

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL+ +   +G+   T T N +++ L E  + E+  R+   +  +G + + V+Y TL+  
Sbjct: 482 VELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISG 541

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
              + + D+A   ++            M   GLKP N   + LI       +  EA    
Sbjct: 542 CCGNKKLDEAFMFMDE-----------MVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFW 590

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
              K NG+ PDV TY+ ++    + ++
Sbjct: 591 GDCKRNGMIPDVYTYSVMIDGCCKAER 617



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 154/338 (45%), Gaps = 42/338 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAF--- 183
           L  +L+  LC        + AV  WL+  N  +  +   S  L+H L  + KL E F   
Sbjct: 464 LLTTLISGLCKHGKH---SKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQ 520

Query: 184 --LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             +L +   +  ++YN LIS C  N  L++A   M +M + G   D   YS++I+ L   
Sbjct: 521 KEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNM 580

Query: 242 NKIDSSLL---------------------------------QKLYKEIECDKIELDGQLL 268
           NK++ ++                                  QKL+ E+  + ++ +  + 
Sbjct: 581 NKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVY 640

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  + ++G  S A+      +  G+SP +ATY ++I  +S   R  EA+ + EE++ 
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P    Y AL+ GY K+G +   E ++ EM    V P++ TY+++I  YA  G    
Sbjct: 701 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 760

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           A  +L EM      P+S  Y   + GY  +G   + F+
Sbjct: 761 ASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798


>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 540

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 219/443 (49%), Gaps = 32/443 (7%)

Query: 223 GYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           G +C  D   Y+LVI+    T +  ++  Q  + +++      D  + N +I+ + K G+
Sbjct: 52  GKNCPPDIKFYALVIKEAINTGRFQTA--QHWFSKMKLLGCPPDIVIYNILILEYGKRGN 109

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S+AM++    +  GL P + TY AV++A    G   +     +E++E+G+KP   AY+ 
Sbjct: 110 FSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSI 169

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + K G  +DA     E++ SG LPD   Y+ LI A+A  G  + A +V KE + S 
Sbjct: 170 LIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSF 229

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              +  I+  ++  Y       +   VLK MK  G++P+   Y  +++ F + N    A+
Sbjct: 230 CLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAI 289

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ M          T+ T+++ + K G +  AEEL  +M++ G+      Y+ +I++ 
Sbjct: 290 KLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMY 349

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD------- 573
           G+  + ++  RL   M+ QG   N++ Y T++D+YG++GR +DA   +  L D       
Sbjct: 350 GKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDT 409

Query: 574 -----------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                            + +  F   R DGLK   + +  +IN +G+ ++ ++   +L+ 
Sbjct: 410 VTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEV 469

Query: 617 MKENGLKPDVVTYTTLMKALIRV 639
           M ++G++PD    T ++K ++ +
Sbjct: 470 MPKSGIQPD----TRILKTVVEI 488



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 194/429 (45%), Gaps = 13/429 (3%)

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           QDG+   F  Y      L R  K  +  L+ L  E+       D +    VI      G 
Sbjct: 17  QDGFEPHFHLYVAFAHCLMRVQKWVA--LEILVDEMIGKNCPPDIKFYALVIKEAINTGR 74

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A  +    + +G  P    Y  +I      G   +A   F +LK+ GL P +  Y A
Sbjct: 75  FQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCA 134

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L    K+G +      + EM  +G+ PD+  YS+LID +  AGR E A    +E+++S 
Sbjct: 135 VLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSG 194

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+S  Y+ ++  +   G   +   V KE + S    D   +  MI  + K      A+
Sbjct: 195 YLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQAL 254

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M   G++P+ + + ++++   +  +   A +LFEEMQE       +TY  M+N+ 
Sbjct: 255 HVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVY 314

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +       + LL  MR  G   NVV Y+TL+D+YG+ G+  +A              F 
Sbjct: 315 SKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEA-----------TRLFS 363

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M+  G K + +  N++++ +G+  R  +A  ++  +K++ L PD VTYTTL+ A  R+ 
Sbjct: 364 TMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLG 423

Query: 641 KFHKVFSSY 649
           +F +    +
Sbjct: 424 RFEECIRVF 432



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 196/429 (45%), Gaps = 9/429 (2%)

Query: 152 WLQKHNL--CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACA 204
           W  K  L  C    ++Y+ILI   G+     +A   F   + + L P   TY A++SAC 
Sbjct: 81  WFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACR 140

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           +  +++K    + +MR+ G   D + YS++I    +  + + +     ++E++      D
Sbjct: 141 KVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDA--AATFRELQMSGYLPD 198

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I  FAK G   +A      AQ          +  +I   + +    +A  V +
Sbjct: 199 SVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLK 258

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +KE GL+P    Y ++L  +++      A  +  EM+ S     E TY  +++ Y+ AG
Sbjct: 259 LMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAG 318

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
              +A  +L +M     + N   YS ++  Y   G+ Q   ++   MK  G + +   YN
Sbjct: 319 FHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYN 378

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            M+D +GK   ++ A      +    + PDT+T+ TLI+ + + GR++    +FE+ +  
Sbjct: 379 TMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRAD 438

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G         IMIN+ G+  ++  +  LL  M   G+ P+     T+V+IY   G  ++A
Sbjct: 439 GLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENA 498

Query: 565 IECLEGLSD 573
            E L  +++
Sbjct: 499 AELLRKINE 507



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 24/304 (7%)

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            EF      + G  P  H Y           +W +  I++ EM   +  P+   Y+ ++ 
Sbjct: 8   VEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIK 67

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
              + G +Q       +MK  G  PD   YN++I  +GK      AM  F ++  EG+ P
Sbjct: 68  EAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLP 127

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D+ T+  ++    K G  D+  E  +EM+E G  P    Y+I+I++ G+  R ED     
Sbjct: 128 DSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATF 187

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------CLEG-------------- 570
             ++  G LP+ V Y TL+  + + G  D A           CL+               
Sbjct: 188 RELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKA 247

Query: 571 -LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            ++DQA++  ++M+  GL+P+ L   S++NAF    +   A  + + M+E+  +    TY
Sbjct: 248 RMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTY 307

Query: 630 TTLM 633
            T++
Sbjct: 308 ITML 311


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 246/524 (46%), Gaps = 24/524 (4%)

Query: 132 LLKNLCSSN----SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           +L N+C  +      +D+A+     ++ + L    E+ Y+ +I  L ++ +L EA   F 
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFE 297

Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++ R  P TY  N +I         ++A +L+ + R  G     I Y+ ++  L +  
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L  K+++E++ D    +    N +I    +AG    A       Q  GL P   T
Sbjct: 358 KVDEAL--KVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  S +  EA A+FEE+      P    + +L+ G  K+G + DA  V  +M 
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            S    +   Y+ LI  + N GR E    + K+M   +  P+  + +  +      GE +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + +E+K+    PD   Y+++I    K    +     F  M  +G   DT  +N +I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   KCG+ ++A +L EEM+ +G+ P   TY  +I+ L + +R ++   L    +++ + 
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   LE L  +           GL P+    NSL++A  
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNLYTWNSLLDALV 703

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MKE    P+ VTY  L+  L +V KF+K F
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/550 (22%), Positives = 251/550 (45%), Gaps = 34/550 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC +N  +D A  +   L+K N        Y+ +I   G + K  EA+ L +R
Sbjct: 276 YTSMIGVLCKANR-LDEAVEMFEHLEK-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           QR      + + YN +++   +   +++AL +  +M++D    +   Y+++I  L R  K
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGK 392

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D++   +L   ++   +  + + +N ++    K+    +A            +P   T+
Sbjct: 393 LDTAF--ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I  L   GR  +A  V+E++ +S  +  +  Y +L+K +   G  +D   +  +M  
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               PD    +  +D    AG  E  R + +E++     P++  YS ++ G    G    
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
           T+++   MK  G   DT  YN++ID F K   ++ A    + M ++G EP  +T+ ++ID
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K  R D A  LFEE + +        Y+ +I+  G+  R ++   +L  +  +GL P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------------QAVNAF 579
           N+ T+ +L+D   ++   ++A+ C + + +                        +A   +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           + M+  G+KPS ++  ++I+   +    AEA A+    K NG  PD   Y  +++ L   
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 640 DKFHKVFSSY 649
           ++    FS +
Sbjct: 811 NRAMDAFSLF 820



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 211/463 (45%), Gaps = 12/463 (2%)

Query: 115 FKLAESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
            K+ E  +   AP    ++ L+  LC +   +D A+ +   +QK  L +      +I++ 
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGL-FPNVRTVNIMVD 420

Query: 172 ALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            L +S+KL EA  + +    +  TP  +T+ +LI    +   ++ A  +  KM       
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + I Y+ +I++     + +     K+YK++       D QLLN  +    KAG+  K   
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDG--HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +     P   +Y+ +I  L  +G   E   +F  +KE G    T+AYN ++ G+ 
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G +  A  ++ EM+  G  P   TY  +ID  A   R + A ++ +E +    + N  
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           IYS ++ G+   G     + +L+E+   G+ P+ + +N ++D   K   ++ A+  F  M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
                 P+ +T+  LI+   K  ++++A   ++EMQ++G  P T +Y  MI+ L +    
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            +   L    +A G +P+   Y  +++      R  DA    E
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 26/357 (7%)

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +  E+  +G  P       ++ G VK   L++   VV  M +    P    Y+ LI A
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           ++     +    + ++M+    +P   +++ ++ G+   G       +L EMKSS ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YNV ID+FGK   +  A   F  + + G++PD +T+ ++I    K  R D A E+FE
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            +++    PCT  YN MI   G   ++++   LL   RA+G +P+V+ Y  ++    + G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357

Query: 560 RFDDAIE-----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           + D+A++                       C  G  D A      M+  GL P+   +N 
Sbjct: 358 KVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
           +++   + Q+  EA A+ + M      PD +T+ +L+  L    RVD  +KV+   L
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 179/384 (46%), Gaps = 15/384 (3%)

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++++G  KA    +    + M +     P  + Y  +I A S    +     +F++++E 
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P    +  L++G+ K G +  A  ++ EM+ S +  D   Y++ ID++   G+ + A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                E+E +  KP+   Y+ ++             ++ + ++ +   P T+ YN MI  
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +G       A +  +R  ++G  P  I +N ++ C  K G+ D A ++FEEM++    P 
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 376

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            +TYNI+I++L    + +    L  +M+  GL PNV T   +VD   +S + D+A    E
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            +  +              P  +   SLI+  G+  R  +A+ V + M ++  + + + Y
Sbjct: 437 EMDYKVCT-----------PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485

Query: 630 TTLMKALI---RVDKFHKVFSSYL 650
           T+L+K      R +  HK++   +
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMI 509



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 183/403 (45%), Gaps = 8/403 (1%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           +D AY V   +   + C +  ++Y+ LI      GR E  ++ +     Q  +P     N
Sbjct: 463 VDDAYKVYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
             +    +  + EK   +  +++   +  D  +YS++I  L +    + +   +L+  ++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY--ELFYSMK 579

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
                LD +  N VI GF K G  +KA + L   +  G  P   TY +VI  L+   R  
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +FEE K   ++     Y++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           DA   A     A +  + M+     PN   Y  ++ G     ++ + F   +EM+  G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P T  Y  MI    K   +  A A FDR  + G  PD+  +N +I+      R   A  L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           FEE + RG      T  ++++ L + +  E    +   +R  G
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 215/460 (46%), Gaps = 18/460 (3%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH L  +    +A  L +   R     +P+TYN +I A  +   LE+A +L+ KM 
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG+  D + Y+ V+  L ++ +++ +LL  L+ E+E      + +  N +I+G  +   
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALL--LFNEMERLGCTPNRRSHNTIILGLCQQSK 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +     +   + P + +Y  +I  L+ +G+  EA  +F  + +SG+ P    YN 
Sbjct: 166 IDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNV 225

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G      L +A  +   M   G  P   T+++LIDA+   G+ + A  +LK M    
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS +++G            +L++M     +P     N +I    K   +  A 
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D M+S G  PD +T+NTL+  H + G+ +RA EL  +M  RG  P   TY  +++ L
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  R  +   +   M++ G  PN+ TYT L+  +  +G+ D  ++            F 
Sbjct: 406 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK-----------LFG 454

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            M   G+ P ++   +L     +  R A A  +L+  +E+
Sbjct: 455 EMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 184/376 (48%), Gaps = 15/376 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G AKAG  + A          G++P T  Y ++I  L  +    +A  +F ++   G
Sbjct: 16  LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    YN ++    K G L++A  ++ +M   G +PD  TY+ ++D    +GR E A 
Sbjct: 76  CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++  EME     PN   ++ I+ G   + +  +  QV  EM++  + PD+  Y ++ID  
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY--DRAEELFEEMQERGYFP 508
            K   L+ A   F RML  GI P  +T+N +I  H  C  Y  D A ELF+ M+ +G  P
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI--HGMCLAYTLDEALELFKSMRSKGCRP 253

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+NI+I+   ++ + ++  RLL  M   G +P+VVTY+TL+       R DDA   L
Sbjct: 254 SRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 313

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E +  +             KP+ +  N+LI+   +  R  EA  VL  M  +G  PDVVT
Sbjct: 314 EDMVKRQC-----------KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 629 YTTLMKALIRVDKFHK 644
           Y TL+    R  +  +
Sbjct: 363 YNTLVHGHCRAGQTER 378



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 206/463 (44%), Gaps = 16/463 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +Y  LI   A+   L  A +L  K+   G     + Y+ +I  L   N  D +  ++L+ 
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA--RELFA 69

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++            N +I    K G   +A   +      G  P   TY  V+  L  SG
Sbjct: 70  DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  +F E++  G  P  +++N ++ G  +   +  A  V  EME   + PD  +Y 
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID  A AG+   A  + + M  S   P++  Y+ ++ G           ++ K M+S 
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P    +N++ID   K   +  A     RM  +G  PD +T++TLI       R D A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L E+M +R   P   T N +I+ L +  R ++ + +L  M + G  P+VVTY TLV  
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + ++G+ + A E    LSD        M   GL P+ +   +L++   +  R  EA  V 
Sbjct: 370 HCRAGQTERAREL---LSD--------MVARGLAPNVVTYTALVSGLCKANRLPEACGVF 418

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYLFFNI 654
             MK +G  P++ TYT L+       +VD   K+F   +   I
Sbjct: 419 AQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 155/318 (48%), Gaps = 14/318 (4%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P + +Y  L+ G  K G L DA  +  ++  SGV P    Y+ LI     A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++ AR +  +M      P+   Y+ I+     RG  +    ++K+M   G  PD   YN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D   K   +  A+  F+ M   G  P+  + NT+I    +  + D+A ++F EM+ R 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P + +Y I+I+ L +  +  +  +L   M   G+ P+ VTY  +  I+G         
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV--IHGM-------- 230

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            CL    D+A+  F+ MR+ G +PS    N LI+A  +  +  EAF +L+ M ++G  PD
Sbjct: 231 -CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD 289

Query: 626 VVTYTTLMKALI---RVD 640
           VVTY+TL+  L    RVD
Sbjct: 290 VVTYSTLISGLCSIARVD 307



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 150/387 (38%), Gaps = 79/387 (20%)

Query: 122 RAVPAPLW-HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           R +P   W + +L +  +    ++ AY +   +    +  S  + Y+++IH +  +  L 
Sbjct: 179 RDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS-AVTYNVVIHGMCLAYTLD 237

Query: 181 EAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           EA  L     S+  R +  T+N LI A  +   +++A  L+ +M  DG+  D + YS +I
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 236 QSLTRTNKIDSS--LLQKLYKEIEC---------------------------DKIELDGQ 266
             L    ++D +  LL+ + K  +C                           D +   GQ
Sbjct: 298 SGLCSIARVDDARHLLEDMVKR-QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 267 -----LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
                  N ++ G  +AG   +A   L      GL+P   TY A+++ L  + R  EA  
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL----- 376
           VF ++K SG  P    Y AL+ G+   G +     +  EM  +G+ PD   Y  L     
Sbjct: 417 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 377 --------------------------------IDAYANAGRWESARIVLKEMEVSHAKPN 404
                                           +D   +AG+ E A   +++M      P 
Sbjct: 477 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPA 536

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEM 431
               + ++AG    G+      VL+E+
Sbjct: 537 PERCASLVAGLCKSGQGGEARAVLEEI 563



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 59/275 (21%)

Query: 130 HSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAF 183
           ++L+  LC +     + ++  A+VS  Q  ++     + Y+ L+H     G++E+  E  
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV-----VTYNTLVHGHCRAGQTERARELL 383

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
                + L P  +TY AL+S   + + L +A  + ++M+  G   +   Y+ +I      
Sbjct: 384 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 443

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG------------ 289
            ++D  L  KL+ E+ C  I  D  +   +     K+G +++A+  L             
Sbjct: 444 GQVDGGL--KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 501

Query: 290 ------------------MAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                             MA G        G  P     A+++  L  SG+  EA AV E
Sbjct: 502 DEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561

Query: 325 ELKE--SGLKPRTKAYN----ALLKGY-VKMGYLK 352
           E+ +   G K R KA       + KGY ++ G LK
Sbjct: 562 EIMDLAYGGKARGKAAKFVEEMVGKGYEIEDGVLK 596


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 248/569 (43%), Gaps = 41/569 (7%)

Query: 95  SNSESASALASSPSSLNRVEFKLAESYRAVPAPL-------WHSLLKNLCSSNSSIDLAY 147
           ++S  A A    P++   V    A +     APL         +L+++LC++  + D A 
Sbjct: 11  TSSLPAPATKPKPAAATSVSVSAAAT-----APLDAGGSGRLSALIRSLCAAGRTADAAR 65

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALI-SACA 204
           A+ +      +     + Y+ +I    R+ ++  A  L+    + P   TY  ++ S CA
Sbjct: 66  ALDTAGDAAGV-----VAYNAMIAGYCRAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCA 120

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIE 262
           R   +  AL ++ +M   G         +++++  R     S++  LQ L+ +       
Sbjct: 121 RGL-IADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAK----GCT 175

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
           LD    N V+    + G   + +  L      G  P   +Y AV+  L  + R  + E +
Sbjct: 176 LDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEEL 235

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
             E+   G  P    +N L+    + G  +     +S+M   G  PD   Y+ +ID    
Sbjct: 236 MVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK 295

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G  E A  +L  M     KPN   Y+ +L G      W+    +L EM       D   
Sbjct: 296 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVT 355

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           +N+++D F +   +   +   ++ML  G  PD IT+ T+I+   K G  D A  L + M 
Sbjct: 356 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 415

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P T +Y I++  L   ERW D + L+ +M  QG LPN VT+ TL++         
Sbjct: 416 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM------- 468

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C +GL +QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L  M   G+
Sbjct: 469 ----CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524

Query: 623 KPDVVTYTTLMKALI---RVDKFHKVFSS 648
            P+ + Y+++  AL    R DK  ++F S
Sbjct: 525 TPNTIIYSSMASALSREGRTDKIIQMFDS 553



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 199/441 (45%), Gaps = 15/441 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N ++SA      +++ + L+ K+   G   D ++Y+ V++ L    + D   +++L  E+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDD--VEELMVEM 239

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                  +    N +I    + G   +    L      G +P    YA +I  +   G  
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A  +   +   GLKP    YN +LKG       ++AE +++EM +     D+ T+++L
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +D +   G  +    +L++M      P+   Y+ ++ G+   G       +LK M + G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+T  Y +++    +      A      M+ +G  P+ +T+NTLI+   K G  ++A E
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L ++M   G  P   +Y+ +I+ LG+  + E+   LL  M  +G+ PN + Y+++     
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL-NSLINAFGEDQRDAEAFAVLQ 615
           + GR D  I+  + + D  V             S+ AL N++I++  +      A     
Sbjct: 540 REGRTDKIIQMFDSIQDATVR------------SDAALYNAVISSLCKRWETDRAIDFFA 587

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
           YM  NG  P+  TYT L++ L
Sbjct: 588 YMVSNGCMPNESTYTILIRGL 608



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 183/415 (44%), Gaps = 13/415 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++++LK LC +    D+   +V  ++    C      ++ LI  L R+   E+++EA   
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVG--CPPNVATFNTLIAYLCRNGLFEQVHEALSQ 273

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 TP    Y  +I    ++   E A +++S+M   G   + + Y+ V++ L    +
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            + +  LL ++++E +C    LD    N ++  F + G   + +  L      G  P   
Sbjct: 334 WEEAEDLLAEMFQE-DC---PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  VI      G   EA  + + +   G KP T +Y  +LKG  +     DA+ ++S M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G LP+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+ 
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +   ++L  M + G+ P+T  Y+ M     +       +  FD +    +  D   +N +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           I    K    DRA + F  M   G  P  +TY I+I  L  +    + + LL  +
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 215/453 (47%), Gaps = 13/453 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI A  R  D++ A+ L+  M   G     + Y+ V++ L +  + D +  ++++
Sbjct: 193 VTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKA--KEVF 250

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++   +  D +  N +I GF + G+  +A++F    Q   ++P   +++ +I   S  
Sbjct: 251 RTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRR 310

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A A   E+K  GL P    Y  ++ G+ + G + +A  V  EM   G LPD  TY
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L++      R   A  +L EME     P+   ++ ++ GY  +G ++   Q+   +  
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + PD   YN +ID   +   L  A   +D M +  I P+ IT++ LID H + G+ + 
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVED 490

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A    +EM ++G  P   TYN +I         +  ++ L  MR   + P+++T+ TL+ 
Sbjct: 491 AFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIH 550

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y +        E + G    A N F +M  + ++P  +  N +IN F E     +A  V
Sbjct: 551 GYIKE-------ENMHG----AFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + M ++G++PD  TY +L+   +      + F
Sbjct: 600 FKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAF 632



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 225/495 (45%), Gaps = 21/495 (4%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           ++ +LI    +S K  EAF     LL  R  +     NAL++  +R      A      +
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                  +    ++++ S  +T + D +    +  E+E   +  D    N +I    +AG
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGA--DTVISEMEKRCVFPDVVTHNVLIDARFRAG 206

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D   A+  +      GL P   TY +V+  L    R  +A+ VF  + +  + P  +++N
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN 266

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+ ++G +K+A     EM+   V PD  ++S LI  ++  G  + A   L+EM+  
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+  IY+ ++ G+   G      +V  EM   G  PD   YN +++   K + L  A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + M   G+ PD  T+ TLI  + + G ++ A +LF+ +  +   P   TYN +I+ 
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           +  +        L  +M A+ +LPN +TY+ L+D + + G+ +DA     G  D+ V   
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF----GFLDEMVKK- 501

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                 G  P+    NS+I  +       +    LQ M+++ + PD++T+ TL+   I+ 
Sbjct: 502 ------GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKE 555

Query: 640 DKFHKVFSSYLFFNI 654
           +  H  F+    FNI
Sbjct: 556 ENMHGAFN---VFNI 567



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 230/503 (45%), Gaps = 24/503 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           + HS  K L       D A  V+S ++K  + +   + +++LI A  R+  +  A  L  
Sbjct: 163 MVHSYCKTL-----EFDGADTVISEMEKRCV-FPDVVTHNVLIDARFRAGDVDAAIALVD 216

Query: 188 ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
               + L P  +TYN+++    ++   +KA  +   M Q     D  +++++I    R  
Sbjct: 217 SMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVG 276

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++  ++  K YKE++   +  D    + +I  F++ G+   A  +L   +G+GL P    
Sbjct: 277 EVKEAV--KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVI 334

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  VI     +G   EA  V +E+   G  P    YN LL G  K   L DAE +++EME
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEME 394

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV PD  T++ LI  Y   G +E+A  +   +     +P+   Y+ ++ G   +G+  
Sbjct: 395 ERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLA 454

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++  +M +  + P+   Y+++ID+  +   +  A    D M+ +G  P+  T+N++I
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G   + ++  ++M++   FP   T+N +I+   ++E       +   M  + + 
Sbjct: 515 KGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVR 574

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+ VTY  +++ + + G   DA    +G+ D            G++P      SLIN   
Sbjct: 575 PDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS-----------GIEPDRYTYMSLINGHV 623

Query: 603 EDQRDAEAFAVLQYMKENGLKPD 625
                 +AF +   M   G  PD
Sbjct: 624 TAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 52/323 (16%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKH----NLCYSYELLYSILIHALGRSEKLYEAFL 184
           +++LL  LC  +  +D A  +++ +++     +LC      ++ LIH   R      A  
Sbjct: 370 YNTLLNGLCKQHRLLD-AEKLLNEMEERGVTPDLC-----TFTTLIHGYCRQGNFENALQ 423

Query: 185 LSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L     RQRL P  +TYN+LI    R  DL KA  L   M       + I YS++I S  
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS-- 481

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
                             C+K                  G    A  FL      G  P 
Sbjct: 482 -----------------HCEK------------------GQVEDAFGFLDEMVKKGNLPN 506

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY ++I     SG   + +   +++++  + P    +N L+ GY+K   +  A  V +
Sbjct: 507 IRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFN 566

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            ME+  V PD  TY+++I+ ++  G  + A  V K M  S  +P+ + Y  ++ G+   G
Sbjct: 567 IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626

Query: 420 EWQRTFQVLKEMKSSGVEPDTHF 442
             ++ FQ+  EM   G  PD  F
Sbjct: 627 NSKQAFQLHDEMIHRGFAPDDKF 649



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 170/393 (43%), Gaps = 49/393 (12%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEA---------------VFEELKESGLKPRTKAY 338
           +G  P TA  AA  TA + +GR  E ++               +   L  S   P+ + +
Sbjct: 31  IGARPSTAALAAAATAAAAAGRASECQSLLLRMSRRRGASRREIVSSLLASSPTPQPQVF 90

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-----ESARIVL 393
           + L++ Y +    ++A F    +     +P   + S  + A  +   W     E+ R+VL
Sbjct: 91  DLLIRTYTQSRKPREA-FEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVL 149

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
                S ++ N++  + ++  Y    E+     V+ EM+   V PD   +NV+ID   + 
Sbjct: 150 S----SDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A+A  D M + G++P  +T+N+++    K  R+D+A+E+F  M +    P   ++
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------- 566
           NI+I         ++  +    M+ + + P+VV+++ L+ ++ + G  D A         
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325

Query: 567 -----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            C  G   +A+     M   G  P  +  N+L+N   +  R  +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A  +L  M+E G+ PD+ T+TTL+    R   F
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 222/482 (46%), Gaps = 34/482 (7%)

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I A  ++     A  +  KM++     + +  + ++ SL R     SS      +E   D
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR---YPSSHSVSFSREAFND 198

Query: 260 KIEL----DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
            I+L    +    N VI G+        A+ FL +      SP   TY  ++ AL   GR
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  +  ++K  GL P    YN L+ GY KMG+LK+A  V+  M ++ +LPD  TY++
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+   N GR E A  +  EME     P+   Y+ ++ G  +  +    F++L+EM   G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V+P+   +N+M+  + K   +  A     +M   G  PD +T+NTLI+ + K G    A 
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
              +EM  +     + T N ++  L  +++ E+  +LL + R +G   + V+Y TL+  Y
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 556 GQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
            + G  D A++                        C  G ++QA++    +   GL P  
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
              N++++ +  +    +AF     M EN  KPDV T   L++ L     ++K  K+F++
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618

Query: 649 YL 650
           ++
Sbjct: 619 WV 620



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 178/386 (46%), Gaps = 7/386 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLS---QRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI+ L    ++ EAF L    +  +L P  ++YN LI+ C     + +A  L+ +M 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + ++++++   +  K+D +       ++E      D    N +I G+ KAG+
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDA--SNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A R +       +   + T   ++  L    +  EA  +    ++ G      +Y  
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K G +  A  +  EM+   ++P   TY+ +I      G+ E A   L E+  S 
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ IL GY   G+ ++ FQ   +M  +  +PD    N+++        L  A+
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+  +S+G   DT+T+NTLI    K GR D A  L  EM+E+   P   TYN +I  L
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVV 546
            +  R  + +  +  M  +G LP  V
Sbjct: 674 TDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 14/353 (3%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP  A     I A   SG+   A  +F+++K   L+P     N LL   V+        F
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 357 ---VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
                ++  + G++P+ +T++++I  Y    +++ A   L  M   +  P++  Y+ IL 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
               +G       +L +MKS G+ P+ + YN+++  + K   L  A    + M    + P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+N LI+     GR + A +L +EM+     P   +YN +IN   E  +  +  +LL
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  +G+ PN VT+  +V  Y + G+ DD           A N    M   G  P  + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDD-----------ASNTITKMEESGFSPDCVT 420

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            N+LIN + +     EAF  +  M    +K D VT  T+++ L R  K  + +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 30/416 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+      K+ EAF L +       +   +T+N ++    +   ++ A N ++KM 
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D + Y+ +I    +   +  +   +   E+    +++D   LN ++    +   
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAF--RTMDEMGRKNMKMDSVTLNTILRTLCREKK 468

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A + L  A+  G      +Y  +I      G    A  +++E+KE  + P T  YN 
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  + G  + A   ++E+  SG+LPDE TY+ ++  Y   G  E A     +M  + 
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+ F  + +L G    G  ++  ++     S G   DT  YN +I +  K   L  A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC----------- 509
                M  + + PD  T+N +I      GR   AEE   +M E+G  P            
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETV 708

Query: 510 ------------TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
                       +  Y+  I  L  + +++D  R+ G  + +G+  +  TY  L+D
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 22/170 (12%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           L ++ KL+  ++ S+ + +  +TYN LI++  +   L+ A NL+S+M +     D   Y+
Sbjct: 609 LEKALKLFNTWV-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667

Query: 233 LVIQSLTRTNKID------SSLLQKLYKEIECDKIELDGQLL---------------NDV 271
            +I +LT + +I       S +L+K     +  +++ +  ++               ++ 
Sbjct: 668 AIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEW 727

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           I      G    AMR  G ++  G++   +TY  ++  L    ++I  EA
Sbjct: 728 IKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           PS   L++ I A+ +  +   AF + + MK   L+P+++T  TL+ +L+R    H V  S
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 649 YLFFN 653
              FN
Sbjct: 193 REAFN 197


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 240/535 (44%), Gaps = 57/535 (10%)

Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL-----YEAFLLSQRQRLTPLTYNAL 199
           LA  + + + +H         Y+ +I +L R   L     Y + ++    R    T+N+L
Sbjct: 135 LALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSL 194

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I    R + ++ A +L  KM   G+  D ++Y+ +I+ L    +ID ++  +L+ E++  
Sbjct: 195 IVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV--ELFGEMD-- 250

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
             + D  +   ++ G   A    + +  L   + +G  P T  YAAV+       +  EA
Sbjct: 251 --QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 308

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           E + +E+ E GL P      A++  Y K G + DA  V+  M+  G  P+  TY+ L+  
Sbjct: 309 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           + N G+   A  +L +M      P++  Y+ ++ G    G  +  F++L+ M+  G+  D
Sbjct: 369 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 428

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            + YN +I+   K      A + FD + + GI+P+ +T+N+LI+   K G+ D A +  E
Sbjct: 429 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 488

Query: 500 -----------------------------------EMQERGYFPCTTTYNIMINLLGEQE 524
                                              EM ++   P T  Y I+I+ L ++ 
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 548

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
            +  V R  G M + G  P+VVTYTT +  Y           C+EG  ++A N    M  
Sbjct: 549 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAY-----------CIEGRLNEAENVLMEMSK 597

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +G+    +A N+L++      +   A ++L+ M      P+  TY  L++ L+R+
Sbjct: 598 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRM 652



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 163/362 (45%), Gaps = 16/362 (4%)

Query: 281 ASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           A  A+R F  M +    +P   TY AVI +L        A      +  SG +P    +N
Sbjct: 133 APLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFN 192

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ GY +   +  A  +  +M   G   D  +Y+ LI+    AGR + A  +  EM+  
Sbjct: 193 SLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD-- 250

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+  +Y+ ++ G  +    +    +L+ MK  G  P T  Y  ++D   +      A
Sbjct: 251 --QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 308

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M  +G+ P  +T   +I+ + K GR   A  + E M+ RG  P   TYN ++  
Sbjct: 309 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
              + +      LL  MRA G+ P+ VTY  L  I GQ         C++G  + A    
Sbjct: 369 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL--IRGQ---------CIDGHIESAFRLL 417

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           R+M  DGL       N+LINA  +D R  +A ++   ++  G+KP+ VT+ +L+  L + 
Sbjct: 418 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 477

Query: 640 DK 641
            K
Sbjct: 478 GK 479



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 203/509 (39%), Gaps = 41/509 (8%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARND 207
           L K   C      Y+ L+       K+++A  L  + R   + P  +TYN LI     + 
Sbjct: 349 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 408

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            +E A  L+  M  DG   D   Y+ +I +L +  + D +    L+  +E   I+ +   
Sbjct: 409 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC--SLFDSLETRGIKPNAVT 466

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G  K+G A  A +FL      G +P T TY++ I  L     + E  +   E+ 
Sbjct: 467 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 526

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  +KP T  Y  ++   +K            EM  SG  PD  TY+  + AY   GR  
Sbjct: 527 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 586

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  VL EM  +    ++  Y+ ++ G+   G+      +LK+M S    P+   Y +++
Sbjct: 587 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 646

Query: 448 DTFGKYNCLHHAM-----------------AAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               +   +   +                   FD M      P++ T++++++   + GR
Sbjct: 647 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 706

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + A  L   M+E         Y  ++    + +R+ D   L+ +M   G +P +++Y  
Sbjct: 707 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 766

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRD 607
           L+            + C EG +D+A   F   R     P  +    +I+     G     
Sbjct: 767 LL----------SGLIC-EGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 815

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            E   +L+ M     +P   TY  L + L
Sbjct: 816 REMIIMLERMN---CRPSHQTYAMLTEEL 841


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 247/522 (47%), Gaps = 35/522 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWL-QKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           + S++  LC +N  +D A  +   L Q   +  +Y   Y+ +I   G + K  EA+ L +
Sbjct: 303 YTSMIGVLCKANR-LDEAVELFEQLEQNRKVPCAYA--YNTMIMGYGSAGKFDEAYGLLE 359

Query: 188 RQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           RQ+      + + YN +++   +   +E+AL +  +M++D    +   Y+++I  L R  
Sbjct: 360 RQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREG 418

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVG-----FAKAGDASKAMR-FLGMAQGVGL 296
           K++++L      EI  D +E  G   N + V        KA    +A   F GM   V  
Sbjct: 419 KLNAAL------EIR-DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV-C 470

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   T++++I  L   GR  +A +++E++ + G  P    Y +L++ + K G  +D   
Sbjct: 471 TPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHK 530

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  EM  +G  PD    +  +D    AG  E  R + +E+      P++  YS ++ G  
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G    T+++   MK  G   DTH YN +ID F K   ++ A    + M  +G  P  +
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ ++ID   K  R D A  LFEE +  G       Y+ +I+  G+  R ++   ++  +
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +GL PNV T+  L+D   ++   ++A+ C + + D               P+ +  + 
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC-----------PPNQITYSI 759

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           LIN     ++  +AF   Q M++ GLKP+ +TYTT++  L +
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAK 801



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 234/514 (45%), Gaps = 32/514 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKM 219
           L++ LI    R  ++  A  L    +   L      YN  I    +   ++ +     +M
Sbjct: 232 LFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEM 291

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G   D + Y+ +I  L + N++D ++  +L++++E ++        N +I+G+  AG
Sbjct: 292 KSHGLMPDDVTYTSMIGVLCKANRLDEAV--ELFEQLEQNRKVPCAYAYNTMIMGYGSAG 349

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A   L   +  G  P    Y  ++T L    R  EA  +FEE+K   + P    YN
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYN 408

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+    + G L  A  +  +MER+G+ P+  T +++ID    A + E A  + + M+  
Sbjct: 409 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN+  +S ++ G    G     + + ++M   G  P    Y  +I +F K       
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +  M+  G  PD    NT +DC FK G  ++   LF E+   G+ P   +Y+I+I+ 
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------- 569
           L +     +   L   M+ QG + +   Y  ++D + +SG+ + A + LE          
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 570 ---------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                    GL+     D+A   F   +++G+K + +  +SLI+ FG+  R  EA+ +++
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            + + GL P+V T+  L+ AL++ ++ ++    +
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEALICF 742



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 245/524 (46%), Gaps = 24/524 (4%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           +L N+C         +D+++     ++ H L    ++ Y+ +I  L ++ +L EA   F 
Sbjct: 266 VLYNVCIDCFGKAGKVDMSWKFFHEMKSHGL-MPDDVTYTSMIGVLCKANRLDEAVELFE 324

Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++ R  P  Y  N +I         ++A  L+ + +  G     I Y+ ++  L +  
Sbjct: 325 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +++ +L  ++++E++ D +  +    N +I    + G  + A+      +  GL P   T
Sbjct: 385 RVEEAL--RIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLT 441

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              +I  L  + +  EA ++FE + +    P    +++L+ G  K G + DA  +  +M 
Sbjct: 442 VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 501

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G +P    Y+ LI ++   GR E    + KEM  +   P+  + +  +      GE +
Sbjct: 502 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 561

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + +E+ + G  PD   Y+++I    K    +     F  M  +G   DT  +N +I
Sbjct: 562 KGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 621

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+ ++A +L EEM+ +G+ P   TY  +I+ L + +R ++   L    ++ G+ 
Sbjct: 622 DGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIK 681

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   +E L  +           GL P+    N L++A  
Sbjct: 682 LNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK-----------GLTPNVYTWNCLLDALV 730

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MK+    P+ +TY+ L+  L RV KF+K F
Sbjct: 731 KAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 774



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 231/507 (45%), Gaps = 35/507 (6%)

Query: 175 RSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +S KL EAF + Q  R     P    Y  LI A +   + +  L L  +M++ GY  +  
Sbjct: 172 KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVH 231

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            ++ +I+   R  ++D++L   L  E++ + ++ D  L N  I  F KAG    + +F  
Sbjct: 232 LFTTLIRVFAREGRVDAAL--SLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFH 289

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +  GL P   TY ++I  L  + R  EA  +FE+L+++   P   AYN ++ GY   G
Sbjct: 290 EMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAG 349

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
              +A  ++   +  G +P    Y+ ++       R E A  + +EM+   A PN   Y+
Sbjct: 350 KFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYN 408

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++      G+     ++  +M+ +G+ P+    N+MID   K   L  A + F+ M  +
Sbjct: 409 ILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
              P+ +T+++LID   KCGR D A  L+E+M + G+ P    Y  +I    +  R ED 
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------- 569
            ++   M   G  P++    T +D   ++G  +                           
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588

Query: 570 ----GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               GL+++    F  M+  G      A N++I+ F +  +  +A+ +L+ MK  G  P 
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYLFF 652
           VVTY +++  L ++D+  +   +Y+ F
Sbjct: 649 VVTYGSVIDGLAKIDRLDE---AYMLF 672



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 225/484 (46%), Gaps = 28/484 (5%)

Query: 123 AVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           AVP  P ++ L+  LC     ++ A  +   +++  L +   L  +I+I  L +++KL E
Sbjct: 400 AVPNVPTYNILIDMLCRE-GKLNAALEIRDDMERAGL-FPNVLTVNIMIDRLCKAQKLEE 457

Query: 182 A---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A   F     +  TP  +T+++LI    +   ++ A +L  KM   G+    I Y+ +I+
Sbjct: 458 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 517

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           S  +  + +     K+YKE+       D  L+N  +    KAG+  K           G 
Sbjct: 518 SFFKCGRKEDG--HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   +Y+ +I  L  +G   E   +F  +KE G    T AYNA++ G+ K G +  A  
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ EM+  G  P   TY  +ID  A   R + A ++ +E + +  K N  +YS ++ G+ 
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G     + +++E+   G+ P+ + +N ++D   K   ++ A+  F  M      P+ I
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ LI+   +  ++++A   ++EMQ+ G  P T TY  MI+ L +     +   L    
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 815

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--DQAVNAFRVMRTDGLKPSNLAL 594
           +A G +P+  +Y  ++                EGLS  ++A++A+ +     LK  N+  
Sbjct: 816 KANGGIPDSASYNAMI----------------EGLSSANKAMDAYALFEETRLKGCNIHT 859

Query: 595 NSLI 598
            + +
Sbjct: 860 KTCV 863



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/527 (22%), Positives = 230/527 (43%), Gaps = 61/527 (11%)

Query: 125 PAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS------E 177
           P P L   +LK L  +N++++       W +K          Y+ L+  + R+      E
Sbjct: 90  PLPELVIGVLKRLKDANTAVNY----FQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLE 145

Query: 178 KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           ++ E   LS     + ++   L++ C ++  L +A +++  MR+  +   F  Y+++I +
Sbjct: 146 RILEEMSLSGFGPSSNISIE-LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L+   + D  L+  L+ ++                                   Q +G  
Sbjct: 205 LSEVREPDPMLI--LFHQM-----------------------------------QELGYE 227

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
                +  +I   +  GR   A ++ +E+K + L      YN  +  + K G +  +   
Sbjct: 228 VNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKF 287

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             EM+  G++PD+ TY+ +I     A R + A  + +++E +   P ++ Y+ ++ GY  
Sbjct: 288 FHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGS 347

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G++   + +L+  K+ G  P    YN ++   GK   +  A+  F+ M  + + P+  T
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPT 406

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LID   + G+ + A E+ ++M+  G FP   T NIMI+ L + ++ E+   +   M 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 466

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +   PN VT+++L+D  G+ GR DDA    E + D            G  P  +   SL
Sbjct: 467 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC-----------GHVPGAIVYTSL 515

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           I +F +  R  +   + + M   G  PD+    T M  + +  +  K
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 562



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 172/370 (46%), Gaps = 23/370 (6%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y +++  ++ +      E + EE+  SG  P +     L+   VK   L++A  ++  M 
Sbjct: 128 YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMR 187

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           +    P    Y++LI A +     +   I+  +M+    + N  +++ ++  +   G   
Sbjct: 188 KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVD 247

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L EMKS+ ++ D   YNV ID FGK   +  +   F  M S G+ PD +T+ ++I
Sbjct: 248 AALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI 307

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K  R D A ELFE++++    PC   YN MI   G   ++++   LL   +A+G +
Sbjct: 308 GVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 367

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV-------------------NAFRVMR 583
           P+V+ Y  ++   G+  R ++A+   E +   AV                   NA   +R
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIR 427

Query: 584 TD----GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            D    GL P+ L +N +I+   + Q+  EA ++ + M +    P+ VT+++L+  L + 
Sbjct: 428 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 487

Query: 640 DKFHKVFSSY 649
            +    +S Y
Sbjct: 488 GRVDDAYSLY 497



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 176/369 (47%), Gaps = 7/369 (1%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP-LT-YNALISACARNDDLEKALNLMSK 218
           ++Y+ LI +    GR E  ++ +        +P LT  N  +    +  + EK   L  +
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 569

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +   G+  D  +YS++I  L +    + +   +L+  ++     LD    N VI GF K+
Sbjct: 570 INAHGFIPDARSYSILIHGLVKAGLANETY--ELFYAMKEQGCVLDTHAYNAVIDGFCKS 627

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  +KA + L   +  G  P   TY +VI  L+   R  EA  +FEE K +G+K     Y
Sbjct: 628 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 687

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+DA   A     A I  + M+ 
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 747

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   YS ++ G     ++ + F   +EM+  G++P+T  Y  MI    K   +  
Sbjct: 748 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F R  + G  PD+ ++N +I+      +   A  LFEE + +G    T T  ++++
Sbjct: 808 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 867

Query: 519 LLGEQERWE 527
            L + E  E
Sbjct: 868 ALHKAECLE 876



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 12/250 (4%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I  L + ++L EA++L     S   +L  + Y++LI    +   +++A  +M ++ 
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 711

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           Q G   +   ++ ++ +L +  +I+ +L+  +  K+++C   ++   +L   I G  +  
Sbjct: 712 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL---INGLCRVR 768

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA  F    Q +GL P T TY  +I+ L+ +G  +EA  +F   K +G  P + +YN
Sbjct: 769 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 828

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI---VLKEM 396
           A+++G        DA  +  E    G      T  +L+DA   A   E A I   VLKE 
Sbjct: 829 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKET 888

Query: 397 EVSHAKPNSF 406
             S     SF
Sbjct: 889 AKSQHASRSF 898


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 181/384 (47%), Gaps = 16/384 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G  K G   +A+  L      G +P   TY ++I  L    R+ EA  +F+E+  
Sbjct: 25  NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 84

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL   T  Y AL++  ++ G +  A  V   M   G +PD  T S +ID  + AGR  +
Sbjct: 85  RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 144

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  + K ME     PN  +YS ++ G     +     ++L +MK +   PDT  YNV+ID
Sbjct: 145 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLID 204

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A A FD ML  G +PD  T+N LI    K G  D A       QE     
Sbjct: 205 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA--QETTING 262

Query: 509 CTT---TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           CT    TY  +++ L + ++ E+   L+  + A G  P + TY  L++   + GR ++AI
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 322

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           + L  + D           +G  P  +   SLI+  G+++R  EA+ + + M   GL  D
Sbjct: 323 DLLRKIVD-----------NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
            V YT L++ L++  K  +  S Y
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVY 395



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 224/471 (47%), Gaps = 19/471 (4%)

Query: 178 KLYEAFLLSQR---QRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           K+ EA  L ++      TP   TYNAL++   +   LE+A++L+ K+  +G   D + Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L +  +  S    KL+KE+    + LD      +I    + G   +A        
Sbjct: 61  SLIDGLGKEKR--SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             G  P   T + +I  LS +GR   A  +F+ ++  GL P    Y+AL+ G  K   + 
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  ++++M+++   PD  TY++LID    +G  E+AR    EM  +  KP+ + Y+ ++
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238

Query: 413 AGYRDRGEWQRTFQVL-KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +G+   G        L +E   +G   D H Y  ++D   K   +  A+A  +++ + G 
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P   T+N L++   K GR + A +L  ++ + G  P   TY  +I+ LG+++R  +  +
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +GL  + V YT L+    Q+G+             QA + ++ M + G  P  
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELLQTGKI-----------PQASSVYKTMTSHGCVPDV 407

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           + L+++I+   +  R   A  + + M+  GL P+ V Y+ L+  L +  K 
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 229/519 (44%), Gaps = 27/519 (5%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++LL  LC       +IDL   +V      N C    + Y+ LI  LG+ ++ +EA+ L
Sbjct: 24  YNALLNGLCKMGRLEEAIDLLRKIVD-----NGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            +   L  L      Y ALI    +   + +A ++   M   G   D +  S +I  L++
Sbjct: 79  FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I +++  +++K +E   +  +  + + +I G  KA     A+  L   +    +P T
Sbjct: 139 AGRIGAAV--RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 196

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF-VVS 359
            TY  +I  L  SG    A A F+E+ E+G KP    YN L+ G+ K G    A   +  
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           E   +G   D HTY+ ++D  A   + E A  +++++  +   P    Y+ +L G    G
Sbjct: 257 ETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMG 316

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +    +L+++  +G  PD   Y  +ID  GK      A   F  M   G+  DT+ + 
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYT 376

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    + G+  +A  +++ M   G  P   T + MI+ L +  R     R+  +M A+
Sbjct: 377 ALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 436

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL PN V Y+ L+    ++ + D A+E L     Q   AF         P  +  N LI+
Sbjct: 437 GLAPNEVVYSALIHGLCKARKMDCALEMLA----QMKKAF-------CTPDTITYNILID 485

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +      A A    M E G KPDV TY  L+    +
Sbjct: 486 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 524



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 219/513 (42%), Gaps = 55/513 (10%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           +K   S+  VP  +  S + +  S    I  A  +   ++   L    E++YS LIH L 
Sbjct: 114 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL-APNEVVYSALIHGLC 172

Query: 175 RSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           ++ K+  A  +L+Q ++   TP  +TYN LI    ++ D+E A     +M + G   D  
Sbjct: 173 KARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 232

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I                                      GF KAG+   A   L 
Sbjct: 233 TYNILIS-------------------------------------GFCKAGNTDAASHSLA 255

Query: 290 MAQGV-GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
               + G +    TY A++  L+ + +  EA A+ E++  +G  P    YNALL G  KM
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L++A  ++ ++  +G  PD  TY+ LID      R   A  + KEM +     ++  Y
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++      G+  +   V K M S G  PD    + MID   K   +  A+  F  M +
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ P+ + ++ LI    K  + D A E+  +M++    P T TYNI+I+ L +    E 
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +     M   G  P+V TY  L+  +           C  G +D A   F  M +    
Sbjct: 496 ARAFFDEMLEAGCKPDVYTYNILISGF-----------CKAGNTDAACGVFDDMSSSRCS 544

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            + +   +LI+   + ++  +A    Q+MKE G
Sbjct: 545 ANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 163/361 (45%), Gaps = 28/361 (7%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA A+ E++  +G  P    YNALL G  KMG L++A  ++ ++  +G  PD  TY+ LI
Sbjct: 4   EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D      R   A  + KEM +     ++  Y+ ++      G+  +   V K M S G  
Sbjct: 64  DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD    + MID   K   +  A+  F  M + G+ P+ + ++ LI    K  + D A E+
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M++    P T TYN++I+ L +    E  +     M   G  P+V TY  L+  + +
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243

Query: 558 SGRFDDAIECL------EGLS-------------------DQAVNAFRVMRTDGLKPSNL 592
           +G  D A   L       G +                   ++AV     +  +G  P+  
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
             N+L+N   +  R  EA  +L+ + +NG  PDVVTYT+L+  L    K  + F +Y  F
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL---GKEKRSFEAYKLF 360

Query: 653 N 653
            
Sbjct: 361 K 361


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 244/529 (46%), Gaps = 25/529 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLY 180
           VP  + +S+L +       ID A+ +V  +     C    + Y+ LI  L    ++EK Y
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG-CTPNLVTYNTLIDGLCKASKTEKAY 421

Query: 181 EAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           E    L+S       +TY  ++    +   L+KAL ++  M + G     I Y+ +++ L
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            RT ++D +    ++KE+       D      ++ G+ K+    +A +   +  G+  +P
Sbjct: 482 CRTGRVDEA--HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQK---VVDGIRGTP 536

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y A++      GR  E   VFE++   G  P  K YN ++ G  K G + +A   +
Sbjct: 537 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 596

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M  +G +PD  +Y+++ID    A + + AR VL +M  +   P++  Y+ ++A +   
Sbjct: 597 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTIT 477
             +     +LK M  +GV+PD   YN +I    + N L  A      ML  G +     T
Sbjct: 657 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 716

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NT+ID   K G   +A  L + M   G    T TYNI I+ L ++ R ++   LL  M 
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
               L + V+YTT++    ++ + D A +           A  ++   GL  ++   N L
Sbjct: 777 T---LRDEVSYTTVIIGLCKAEQLDRASKL----------AREMVAVKGLCITSHTFNLL 823

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           I+AF + +R  EA  +L  M + G  P V+TY  ++  L ++DK  K +
Sbjct: 824 IDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAW 872



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 223/498 (44%), Gaps = 35/498 (7%)

Query: 174 GRSEKLYE--AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G+ E+ +   A +  +  R +  TYN LIS   +  ++++A +L+ +    G+  D + Y
Sbjct: 310 GKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTY 369

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S++   L +  +ID +   +L KE+       +    N +I G  KA    KA   L   
Sbjct: 370 SILADGLCKRGRIDEAF--ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL 427

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G  P   TY  ++  L   GR  +A  + E + + G  P    Y AL++G  + G +
Sbjct: 428 VSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRV 487

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  +  EM       D   Y  L++ Y  + R + A+ V+  +      P   +Y+ +
Sbjct: 488 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNAL 544

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G       V ++M   G  P+   YN+++D   K+  +  A    + M S G 
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 604

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD +++N +ID  FK  +   A ++ ++M + G  P   TYN ++    ++ER++D   
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVG 664

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------- 566
           +L NM   G+ P+ VTY TL+    Q+ R  DA E                         
Sbjct: 665 ILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 724

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C EG   QA+     M   G++ + +  N  I+   ++ R  EA ++L  M  + L+ D 
Sbjct: 725 CKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLR-DE 781

Query: 627 VTYTTLMKALIRVDKFHK 644
           V+YTT++  L + ++  +
Sbjct: 782 VSYTTVIIGLCKAEQLDR 799



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 27/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ +I +  + + ++KA  ++ K +  G+  +   Y+++ ++  +T ++  +L  ++++
Sbjct: 162 TYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL--EIFR 219

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I       D    N +I G  +  D   A+ FL       ++P   TY  +I  L  + 
Sbjct: 220 NIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS 275

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +T +A  +  E+ + G+ P T  +N+++ G  K G  + A  +++ M      P   TY+
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 335

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI         + A+ ++ E   S   P+   YS +  G   RG     F+++KEM   
Sbjct: 336 TLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   YN +ID   K +    A    + ++S G  PD +T+  ++D   K GR D+A
Sbjct: 396 GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 455

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ++ E M +RG  P   TY  ++  L    R ++   +   M ++    + + Y +LV+ 
Sbjct: 456 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 515

Query: 555 YGQSGRFDDAIE---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLA 593
           Y +S R  +A +                     C EG  D+  N F  M   G  P+   
Sbjct: 516 YCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKT 575

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            N +++   +  +  EAF  L+ M   G  PDVV+Y  ++  L +  K
Sbjct: 576 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 220/545 (40%), Gaps = 107/545 (19%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQK 251
            T N  +     N   ++   +  +M   GY  D   Y LVI+SL + N+ID   ++L K
Sbjct: 126 FTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDK 185

Query: 252 -------------------------------LYKEI--------------ECDKIELDGQ 266
                                          +++ I               C K + DG 
Sbjct: 186 AKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGA 245

Query: 267 L-----------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           L                  N +I G  KA    KA   L      G++P T T+ +++  
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G+   A ++   + E   +P    YN L+ G  K   +  A+ +V E   SG +PD
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS+L D     GR + A  ++KEM      PN   Y+ ++ G     + ++ +++L+
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            + SSG  PD   Y +++D   K   L  A+   + ML  G  P  IT+  L++   + G
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485

Query: 490 RYDRAEELFEEMQER--------------GYF------------------PCTTTYNIMI 517
           R D A  +F+EM  +              GY                   P    YN ++
Sbjct: 486 RVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALM 545

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +   ++ R +++  +  +M  +G +PN+ TY  ++D   + G+ D+A   LE        
Sbjct: 546 DGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES------- 598

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M + G  P  ++ N +I+   +  +  EA  VL  M + G+ PD VTY TLM    
Sbjct: 599 ----MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC 654

Query: 638 RVDKF 642
           + ++F
Sbjct: 655 KEERF 659



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 245/558 (43%), Gaps = 39/558 (6%)

Query: 119 ESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           E +R +P+P    +++++   C  N   D A   +  + +  +       Y+ILI  L +
Sbjct: 216 EIFRNIPSPDAIAYNAIIHGHCRKNDC-DGALEFLKEMNERKVAPDV-FTYNILIDGLCK 273

Query: 176 SEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           + K  +A  +      + +TP  +T+N+++    +    E+A +L++ M +         
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ +I  L +   +D +  + L  E        D    + +  G  K G   +A   +  
Sbjct: 334 YNTLISGLCKQQNVDRA--KDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
             G G +P   TY  +I  L  + +T +A  + E L  SG  P    Y  ++ G  K G 
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L  A  +V  M + G  P   TY+ L++     GR + A  + KEM       ++  Y  
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY      +   +V+  ++ +   P    YN ++D + K   L      F+ M   G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             P+  T+N ++D   K G+ D A    E M   G  P   +YNI+I+ L +  + ++ +
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           ++L  M   G+ P+ VTY TL+  + +  RFDDA+  L+            M   G+ P 
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN-----------MIKAGVDPD 677

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENG-LKPDVVTYTTLM----------KALIRV 639
           N+  N+LI+   +  R  +A+ ++  M  NG +     TY T++          +AL+ +
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 737

Query: 640 DKF--HKVFSSYLFFNIY 655
           D    H V ++ + +NI+
Sbjct: 738 DHMTGHGVEANTVTYNIF 755



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 166/355 (46%), Gaps = 18/355 (5%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P + TY  VI +L    +  +A  + ++ K  G KP    Y  L + + K G LKDA
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                E+ R+   PD   Y+ +I  +      + A   LKEM      P+ F Y+ ++ G
Sbjct: 215 ----LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDG 270

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                +  +  ++L EM   GV PDT  +N ++D   K      A +    M      P 
Sbjct: 271 LCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPS 330

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+NTLI    K    DRA++L +E    G+ P   TY+I+ + L ++ R ++   L+ 
Sbjct: 331 CCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVK 390

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  PN+VTY TL+D   ++ + + A E LE L            + G  P  +  
Sbjct: 391 EMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV-----------SSGFVPDVVTY 439

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
             +++   ++ R  +A  +++ M + G  P V+TYT LM+ L    RVD+ H +F
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 45/357 (12%)

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           + G K  T   N  L+  ++ G       +   M  +G  PD +TY L+I +     + +
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 388 SARIVLKEMEVSHAK-------------------------------PNSFIYSRILAGYR 416
            A  +L + +V   K                               P++  Y+ I+ G+ 
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHC 237

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
            + +     + LKEM    V PD   YN++ID   K +    A      M+  G+ PDT+
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N+++D   K G+++RA  L   M ER   P   TYN +I+ L +Q+  +  K L+   
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            + G +P+VVTY+ L D   + GR D+A E ++ +S +           G  P+ +  N+
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK-----------GCTPNLVTYNT 406

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
           LI+   +  +  +A+ +L+ +  +G  PDVVTYT ++  L    R+DK  K+    L
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 463



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 160/344 (46%), Gaps = 7/344 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN ++    ++  +++A   +  M   G   D ++Y+++I  L + +K   +  Q L +
Sbjct: 575 TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR-QVLDQ 633

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   I  D    N ++  F K      A+  L      G+ P   TY  +I+ LS + 
Sbjct: 634 MIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692

Query: 315 RTIEA-EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           R  +A E + E L+   +      YN ++    K G LK A  ++  M   GV  +  TY
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++ ID     GR + A  +L EM+      +   Y+ ++ G     +  R  ++ +EM +
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVA 809

Query: 434 -SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+   +H +N++ID F K   L  A+     M+  G  P  IT+N +I C  K  + D
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           +A ELF+EM  RG    + +Y ++I  L  Q R ++  ++L  M
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/349 (21%), Positives = 142/349 (40%), Gaps = 41/349 (11%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLS 186
           ++ ++  LC  +  +D A+  +  +     C    + Y+I+I  L ++ K  EA   L  
Sbjct: 576 YNIVMDGLCK-HGKVDEAFPFLESMHSAG-CVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 187 QRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             Q   P   +TYN L++   + +  + A+ ++  M + G   D + Y+ +I  L++TN+
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  + +++ +    +       N +I    K G   +A+  +    G G+   T TY
Sbjct: 694 LGDAY-ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 304 AAVITALSNSGRTIEAEAVFEELKE---------------------------------SG 330
              I  L   GR  EA ++  E+                                    G
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 812

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L   +  +N L+  + K   L +A  ++  M + G  P   TY+++I       + + A 
Sbjct: 813 LCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAW 872

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            +  EM V     +S  Y+ ++ G   +G  +   QVL+EM SS  E D
Sbjct: 873 ELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 12/248 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L+  L  +N   D AY ++  + ++    S    Y+ +I  L +   L +A LL   
Sbjct: 681 YNTLISGLSQTNRLGD-AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                     +TYN  I    +   L++A +L+S+M  D    D ++Y+ VI  L +  +
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLR-DEVSYTTVIIGLCKAEQ 796

Query: 244 IDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +D +   KL +E+   K + +     N +I  F K     +A+  LG+    G SP   T
Sbjct: 797 LDRA--SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  VIT L    +  +A  +F+E+   G+   + +Y  L+ G    G  K+A  V+ EM 
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 914

Query: 363 RSGVLPDE 370
            S    D+
Sbjct: 915 SSDCEIDD 922


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 243/525 (46%), Gaps = 26/525 (4%)

Query: 125 PAPLWHSLLKNLCS-SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLY 180
           P P  H L + L   + +SI   +  ++   +  L +   +++  LI +   + R+++ +
Sbjct: 113 PKPALHLLRQALGGGTTNSIREIFEFLAA-SRDRLGFKSSIVFDYLIKSCCDMNRADEAF 171

Query: 181 EAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           E F   + + + P   T N+L+S   + +  E A  L ++M +         ++++I  L
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K+  +  +     +E   ++ +    N ++ G+  +G    A   L   +   + P
Sbjct: 232 CKEGKLKKA--KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
            + TY ++I+ +   GR  EA  +FEE+ + GL+P    YN L+ G+   G L  A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM + G+ P   TY+ LI A     R + A  ++KE++     P++  Y+ ++ GY   
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
              ++ F +  EM +SG++P    Y  ++    K N +  A   F ++ SEG+ PD I +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF 469

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N LID H        A EL ++M      P   T+N ++     + + E+ + L   M+ 
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDGLKPSNLALN 595
           +G+ P+ +++ TL+  Y + G   D              AFRV   M   G  P+ L  N
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKD--------------AFRVRNEMLDTGFNPTVLTYN 575

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           +L+    ++Q    A  +L+ M   G+ PD  TY TL++ + +V+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T  ++++      RT  A  ++ E+    +K     +N ++    K G LK A
Sbjct: 181 GVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           +  V  ME SGV P+  TY+ ++  Y ++GR E+A  +L  M+    +P+SF Y  +++G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
              +G  +   ++ +EM   G+ P    YN +ID F     L  A A  D ML +GI P 
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N+LI   F   R D AE + +E+QE+G  P   TYNI+IN        +    L  
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M A G+ P   TYT+L+ +  +  R             +A + F+ + ++G+ P  +  
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMK-----------EADDLFKKITSEGVLPDAIMF 469

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           N+LI+    +     AF +L+ M    + PD VT+ T+M+   R  K
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 18/350 (5%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKES----GLKPRTKAYNALLKGYVKMGYLK 352
           SPK A +  ++      G T     +FE L  S    G K  +  ++ L+K    M    
Sbjct: 112 SPKPALH--LLRQALGGGTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRAD 168

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A      M+  GVLP   T + L+  +    R E+A ++  EM     K + + ++ ++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G+ ++    +  M++SGV+P+   YN ++  +     +  A A    M  + IE
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD+ T+ +LI    K GR + A ++FEEM ++G  P    YN +I+    +   +     
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G+ P + TY +L+       R D+A EC+           + ++  G+ P  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEA-ECM----------IKEIQEKGISPDAI 397

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             N LIN +       +AF +   M  +G+KP   TYT+L+  L + ++ 
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 223/481 (46%), Gaps = 37/481 (7%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L+  TYN  I    +N  + +A+ + + +   G   D   Y  ++  L +  + ++   +
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG--E 305

Query: 251 KLYKE-IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++  E IE   +  +  + N ++ G  K G+   A   +   +  G++P    Y A+I +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSN-LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           +   G+  EAE++F  +   GL P    Y+ L+  + K G L  A   + +M   G+   
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            + YS LI  +   G+  +A+ +  EM  +  KPN  IY+ +++GY   GE    F++  
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM   G+ P+T+ +  +I      N +  A   F  M+   + P+ +T+N LI+ H K G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA--------QGL 541
              RA EL +EM E+G  P T TY  +I+ L    R  + +  + +++         +G 
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604

Query: 542 LPNVVTYTTLVDIYGQSGRFDDA-IECLEGLS-----------------------DQAVN 577
           LPNVVTYT L++   + G  D A + C E L+                       ++A+ 
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
              V+  +G   + +  N LI  F +  R  EA  VL  M ++G+ PD ++Y+T++    
Sbjct: 665 LHDVL-LEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 638 R 638
           R
Sbjct: 724 R 724



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 210/484 (43%), Gaps = 65/484 (13%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+    +  ++  A +L++K+++ G       Y+ +I S+ +  K+D +  + L+     
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA--ESLF----- 378

Query: 259 DKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + +   G   NDV     I  F K G    A+ FLG    VG+      Y+++I+     
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   A+++F+E+  +GLKP    Y +L+ GY K G L +A  +  EM   G+ P+ +T+
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI    +A R   A  +  EM   +  PN   Y+ ++ G+   G   R F++L EM  
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE--------GIEPDTITWNTLIDCH 485
            G+ PDT+ Y  +I        +  A    + +  E        G  P+ +T+  LI+  
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618

Query: 486 FKCGRYDRAEELFEEMQE----------------------------------RGYFPCTT 511
            K G  D+AE L  EM                                     G+   T 
Sbjct: 619 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV 678

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYNI+I    +  R ++   +L NM   G+ P+ ++Y+T++  Y + G   +AI+  E +
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            ++ VN           P  +A N LI          +AF +   M   G+KP+  TY +
Sbjct: 739 LNRGVN-----------PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 787

Query: 632 LMKA 635
           L+  
Sbjct: 788 LIHG 791



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 192/458 (41%), Gaps = 21/458 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T + +++   R      AL+L  ++   G   D   Y+ V++SL      D    +++  
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELK--DFIRAREVIG 239

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E    +L     N  I G  K     +A+    +    GL     TY  ++  L    
Sbjct: 240 RMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVE 299

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                E +  E+ E G  P   A + L+ G  K G +  A  +V+++++ GV P    Y+
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI++    G+ + A  +   M      PN   YS ++  +  RG+       L +M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++   + Y+ +I    K   L  A + FD M++ G++P+ + + +LI  + K G    A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L+ EM  +G  P T T+  +I+ L    R  +  +L G M    ++PN VTY  L++ 
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           +           C EG + +A      M   GL P       LI+      R +EA   +
Sbjct: 540 H-----------CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 615 -------QYMKE-NGLKPDVVTYTTLMKALIRVDKFHK 644
                  Q + E  G  P+VVTYT L+  L ++    K
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDK 626



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 11/333 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y +LIS   +  +L  A  L  +M   G   +   ++ +I  L   N++  +   KL+
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA--NKLF 518

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    +  +    N +I G  K G+  +A   L      GL P T TY  +I+ L ++
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578

Query: 314 GRTIEAEAVFEELKES--------GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           GR  EA     +L+          G  P    Y AL+ G  K+G +  AE +  EM  S 
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN 638

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            LP+++TY+  +D   + G  E A I L ++ +     N+  Y+ ++ G+   G  Q   
Sbjct: 639 SLPNQNTYACFLDYLTSEGNIEKA-IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAA 697

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           +VL  M  SG+ PD   Y+ +I  + +   L  A+  ++ ML+ G+ PDT+ +N LI   
Sbjct: 698 EVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGC 757

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
              G   +A EL ++M  RG  P   TYN +I+
Sbjct: 758 CVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 790



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 154/376 (40%), Gaps = 46/376 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P+  T + V+  L    +   A  +F+E+  SGL+P    Y A+++   ++     A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESARI---------------------- 391
             V+  ME SG      TY++ I       R WE+  I                      
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 392 ------------VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
                       ++ EM      P+    S ++ G R +G     F ++ ++K  GV P 
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN +I++  K   L  A + F+ M  +G+ P+ +T++ LID   K G+ D A     
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLG 414

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           +M E G       Y+ +I+   +  +    K L   M A GL PNVV YT+L+  Y    
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY---- 470

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C EG    A   +  M   G+ P+     +LI+      R AEA  +   M E
Sbjct: 471 -------CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523

Query: 620 NGLKPDVVTYTTLMKA 635
             + P+ VTY  L++ 
Sbjct: 524 WNVIPNEVTYNVLIEG 539



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 157/351 (44%), Gaps = 13/351 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T  +  +I     + R ++   V   + + G+ P+ +  + +L G +++   + A  +  
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDR 418
           E+  SG+ PD + Y+ ++ +      +  AR V+  ME S    +   Y+  + G  +++
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
             W+   ++   +   G+  D   Y  ++    K           + M+  G  P     
Sbjct: 265 RVWE-AVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAV 323

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + L+D   K G    A +L  ++++ G  P    YN +IN + +  + ++ + L  NM  
Sbjct: 324 SNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH 383

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL PN VTY+ L+D + + G+ D A+  L  +++            G+K +    +SLI
Sbjct: 384 KGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV-----------GIKATVYPYSSLI 432

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +   +  +   A ++   M  NGLKP+VV YT+L+    +  + H  F  Y
Sbjct: 433 SGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 53/302 (17%)

Query: 160 YSYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
           Y++  L S L HA  +  + KL+   +      + P  +TYN LI    +  +  +A  L
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMV---EWNVIPNEVTYNVLIEGHCKEGNTVRAFEL 552

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI---ELDGQLLNDV- 271
           + +M + G   D   Y  +I  L  T ++  +  ++   +++ ++    E++G L N V 
Sbjct: 553 LDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA--REFMNDLQGEQQKLNEIEGCLPNVVT 610

Query: 272 ----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
               I G  K G   KA             P   TYA  +  L++ G   +A  + + L 
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 670

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-- 385
           E G    T  YN L++G+ K+G +++A  V+  M  SG+ PD  +YS +I  Y   G   
Sbjct: 671 E-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 729

Query: 386 -----WES----------------------------ARIVLKEMEVSHAKPNSFIYSRIL 412
                WES                            A  +  +M     KPN   Y+ ++
Sbjct: 730 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789

Query: 413 AG 414
            G
Sbjct: 790 HG 791


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 203/416 (48%), Gaps = 16/416 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S+V+    ++ ++D +  + L  E+    + L+    N ++  + +  D ++    L + 
Sbjct: 136 SVVVDGFCKSGRVDDA--RALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIM 193

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+     TY  ++ +LS +G   + EAV +E+K   +      Y A++  Y + G +
Sbjct: 194 ENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNV 253

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  V  E   +G+ P+E TY +LI+ +   G+ E+A ++L +M+      N  I++ +
Sbjct: 254 RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM 313

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  +G      +V   M+  G+E D + YN +     + N +  A      M+ +G+
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGV 373

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ +T+ TLI  H K G    A  LF EM  +G  P   TYN+M++   ++    + +R
Sbjct: 374 PPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAER 433

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M  +GL+P+V TY +LV  +G          C+ G  D A+  F  M+  G +P+ 
Sbjct: 434 FRKEMEKKGLVPDVYTYASLV--HGH---------CVNGKVDVALKLFEEMKHRGTEPNV 482

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
           +A  +LI+   ++ R  EAF +   M + GL PD   Y+ L+ +L    R D  HK
Sbjct: 483 VAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDIHHK 538



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)

Query: 537 RAQGLLPNVVT---YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
           RA G  P  V+    + +VD + +SGR DDA      L D+       M   G++ + L 
Sbjct: 121 RALGSCPGSVSPLAASVVVDGFCKSGRVDDA----RALLDE-------MPRHGVRLNALC 169

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            NSL++ +   + DA    +L+ M+  G++  V TYT L+ +L       KV
Sbjct: 170 YNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKV 221


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 232/515 (45%), Gaps = 60/515 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           +S L   LG S  L++  +     ++ P   TY+ LI    R   LE    +   + + G
Sbjct: 168 HSTLESQLGIS--LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTG 225

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIELDGQLLNDVIVGFAKAGDA 281
           +  + I ++ +++ L    ++D +    L++  E  C    +     N ++ GF     A
Sbjct: 226 WRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVS---YNTLVKGFCNENRA 282

Query: 282 SKAMRFLGMA---QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            +A+  L +    QG+   P   +Y  VI      G+  +A  +F ++ + G+ P    Y
Sbjct: 283 EEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTY 342

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G  K   +  A+ V  +M   GV P   TY+ LI  Y + G+W+    +L+EM  
Sbjct: 343 NTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMST 402

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P+ FIY+ +L      G       +   +   G++PD      MID          
Sbjct: 403 HDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDA-----MID---------E 448

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD-----------------------RAE 495
           A+  FD+M  +G+ P+ + +  LID   K GR D                       +AE
Sbjct: 449 AVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAE 508

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           EL  EM ++G       +N ++  L  + R  + +RL+  M   G+ P+V++Y TLVD +
Sbjct: 509 ELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGH 568

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      CL G +D+A     VM + GLKP+    N+L++ + + +R  +A+++L+
Sbjct: 569 -----------CLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            M  NG  PDVVTY T++  L +  +F +    YL
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 225/528 (42%), Gaps = 64/528 (12%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           YSILI    R  +L   F     +L    R+  + +N L+        L++A N L+ +M
Sbjct: 198 YSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRM 257

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + G   + ++Y+ +++     N+ + +L L  +  + +      D    N VI GF + 
Sbjct: 258 PEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFRE 317

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA          G+ P   TY  VI  L  +     A+AVF+++ + G+KP    Y
Sbjct: 318 GQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTY 377

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY+  G  K+   ++ EM    + PD   Y+LL+D     GR   AR +   +  
Sbjct: 378 NCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIR 437

Query: 399 SHAKPNSFIYSR--ILAGYRDRG------------------------------------- 419
              KP++ I     I    R +G                                     
Sbjct: 438 KGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG 497

Query: 420 -----EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                +W++  +++ EM   G+  D   +N ++    +   +  A    + ML  G+ PD
Sbjct: 498 LCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPD 557

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            I++NTL+D H   GR D A +L + M   G  P   TYN +++   +  R +D   LL 
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD-GLKPSNLA 593
            M   G  P+VVTY T++    Q+GRF +A E    L    +N+    RT   +   N+ 
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKE----LYLNMINS----RTQWDMYTYNII 669

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           LN L      D    EAF + Q +   GL+  ++T+  ++ AL++  K
Sbjct: 670 LNGLCKNNCVD----EAFKMFQSLCSKGLQLHIITFNIMIGALLKGGK 713



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 188/417 (45%), Gaps = 34/417 (8%)

Query: 153 LQKHNL---CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDL 209
           +  H+L   C+ Y LL   L    GR  +    F    R+ + P   +A+I         
Sbjct: 400 MSTHDLEPDCFIYALLLDYLCKN-GRCTEARNIFDSVIRKGIKP---DAMI--------- 446

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++A+ +  KMRQ G   + +NY  +I +L +  ++D ++L+               Q++N
Sbjct: 447 DEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKF-------------NQMIN 493

Query: 270 DVIVGFAKAGDASKA--MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           +V  G        KA  + F  + QG+ L      +  ++  L   GR +EA+ + E + 
Sbjct: 494 EV-YGLCTVEKWEKAEELVFEMLDQGIRLD--VVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
             G++P   +YN L+ G+   G   +A  ++  M   G+ P+E TY+ L+  Y  A R +
Sbjct: 551 RVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRID 610

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +L+EM ++   P+   Y+ IL G    G +    ++   M +S  + D + YN+++
Sbjct: 611 DAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +   K NC+  A   F  + S+G++   IT+N +I    K G+ + A +LF  +   G  
Sbjct: 671 NGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLV 730

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           P   TY ++   L ++   E++  L   M   G  PN      LV  +   G    A
Sbjct: 731 PDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA 787



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 157/359 (43%), Gaps = 61/359 (16%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           ++P   TY+ +I      GR     AVF  + ++G +     +N LLKG      L +A 
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             ++  M   G  P+  +Y+ L+  + N  R E A      +E+ H              
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEA------LELLH-------------- 290

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                       V+ + +     PD   YN +I+ F +   +  A   F +M+  GI PD
Sbjct: 291 ------------VMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPD 338

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+NT+ID   K    DRA+ +F++M ++G  P   TYN +I+      +W++V RLL 
Sbjct: 339 VVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLE 398

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M    L P+   Y  L+D   ++GR      C E     A N F  +   G+KP     
Sbjct: 399 EMSTHDLEPDCFIYALLLDYLCKNGR------CTE-----ARNIFDSVIRKGIKP----- 442

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
           +++I+         EA  +   M++ GL P+VV Y  L+ AL    K  +V  + L FN
Sbjct: 443 DAMID---------EAVCIFDKMRQQGLSPNVVNYGALIDALC---KLGRVDDAILKFN 489



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 7/243 (2%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMS 217
           E  Y+ L+H   ++ ++ +A+ L +   +   TP  +TYN ++    +     +A  L  
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M       D   Y++++  L + N +D +   K+++ +    ++L     N +I    K
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKNNCVDEAF--KMFQSLCSKGLQLHIITFNIMIGALLK 710

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    AM         GL P   TY  +   L   G   E   +F  ++E+G  P ++ 
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRM 770

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            NAL++ ++  G +  A   +S+++      +  T S+LI  Y+     + A+ + ++  
Sbjct: 771 LNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEKYR 830

Query: 398 VSH 400
             H
Sbjct: 831 FPH 833



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/325 (20%), Positives = 132/325 (40%), Gaps = 6/325 (1%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L Q  RL  + +N L+    R   + +A  L+  M + G   D I+Y+ ++     T +
Sbjct: 514 MLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGR 573

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +   KL   +    ++ +    N ++ G+ KA     A   L      G +P   TY
Sbjct: 574 TDEA--AKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L  +GR  EA+ ++  +  S  +     YN +L G  K   + +A  +   +  
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+     T++++I A    G+ E A  +   +      P+   Y  I       G  + 
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +   M+ +G  P++   N ++  F     +  A A   ++  +    +  T + LI 
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811

Query: 484 CHFKCGRYDRAEELFEEMQERGYFP 508
            + + G Y   ++L + + E+  FP
Sbjct: 812 LYSR-GEY---QQLAKSLPEKYRFP 832



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/309 (21%), Positives = 134/309 (43%), Gaps = 19/309 (6%)

Query: 164 LLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           ++++ L+  L R  ++ EA      +L    R   ++YN L+         ++A  L+  
Sbjct: 524 VVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDV 583

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   +   Y+ ++    +  +ID +    L +E+  +    D    N ++ G  + 
Sbjct: 584 MVSIGLKPNEFTYNTLLHGYCKARRIDDA--YSLLREMLMNGPTPDVVTYNTILHGLFQT 641

Query: 279 GDASKAMR-FLGMAQGVGLSPKTA----TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  S+A   +L M     ++ +T     TY  ++  L  +    EA  +F+ L   GL+ 
Sbjct: 642 GRFSEAKELYLNM-----INSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQL 696

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N ++   +K G  +DA  + + +   G++PD  TY L+ +     G  E   ++ 
Sbjct: 697 HIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLF 756

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVEPDTHFYNVMIDTFG 451
             ME +   PNS + + ++  +  RG+  R    L ++  K+  +E  T    + + + G
Sbjct: 757 SAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRG 816

Query: 452 KYNCLHHAM 460
           +Y  L  ++
Sbjct: 817 EYQQLAKSL 825


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 239/528 (45%), Gaps = 26/528 (4%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQR 188
           L+  LC     I+    +   +Q+   C    + YS LI  L    ++ EA   F+  Q+
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRG--CILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQD----GYHCD--FINYSLVIQSLTR 240
               P  + Y  L+    +  ++  AL L  +M  D    G  C    I+YS++I  L +
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             + D +  ++L+KE++   I  D      +I GF  +G   KA         VG+ P  
Sbjct: 315 DRREDEA--RELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 372

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T + +I  L   G+ IEA  + E + + G  P       L+KG      +  A  +  +
Sbjct: 373 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLK 432

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS------HAKPNSFIYSRILAG 414
           M++ G +P+  T + L+     +G  + A  + K M         + KPN+  YS I+ G
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G      ++ KEMK+ GV PD   Y  +I  F +      A   F+ M+  G++PD
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T++ LID   K G+   A EL E M +RG  P T TY  ++  L   +R  +  +L  
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M+  G LP+VVTY TL+    Q+G    A+E    L  + ++      T+  KP  ++ 
Sbjct: 613 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE----LHKKMLSDTGQYGTN-FKPDVISY 667

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           + +I+   +  R+ EA  + + MK  G+ P+V++YT+L+    R  K 
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 260/593 (43%), Gaps = 87/593 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           + +L+K LC  +  I  A  +   ++K   C    + Y  L+  L ++ K+  A  L Q 
Sbjct: 48  YSTLIKGLCMKHR-ISEATQLFMSMKKLG-CRPDAIAYGTLMKGLCQTGKINIALHLHQE 105

Query: 188 ----------RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
                     + + T ++Y+ +I    ++   ++A  L  +M+  G   D I+Y+ +I  
Sbjct: 106 MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 165

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG------FAKAGDASKAMRFLGMA 291
             R+ K + +  + L+ E+      LD  + +DV           K G   +A   L + 
Sbjct: 166 FCRSGKWEKA--KCLFNEM------LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVM 217

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G      TY+ +I  L    R  EA  +F  +++ G +P   AY  L+KG  + G +
Sbjct: 218 IQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNI 277

Query: 352 KDAEFVVSEM----ERSGVL--PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
             A  +  EM     R G+   P   +YS++ID      R + AR + KEM+     P+ 
Sbjct: 278 NTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDV 337

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y+ ++ G+   G+W++   +  EM   G++PD    +V+ID   K   +  A    + 
Sbjct: 338 ISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEV 397

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP----CTT---------- 511
           ++  G  PD +T  TL+       R  +A +LF +MQ+ G  P    C T          
Sbjct: 398 VIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGN 457

Query: 512 ---------------------------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                                      +Y+I+I+ L +  R ++ + L   M+A G++P+
Sbjct: 458 IKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD 517

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           V++YT+L+  + +SG++ DA              F  M   G++P     + LI+   ++
Sbjct: 518 VISYTSLIHGFCRSGKWKDA-----------KYLFNEMVDIGVQPDVTTFSVLIDMLCKE 566

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
            +  EA  +L+ M + G  P+ VTYTTL+K L   D+  +  ++ LF  + K+
Sbjct: 567 GKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE--ATQLFMKMQKL 617



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 220/494 (44%), Gaps = 54/494 (10%)

Query: 126 APLWHSLLKNLCSS---NSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALG---RSEK 178
           A  + +L+K LC +   N+++ L   +++   ++ + C    + YSI+I  L    R ++
Sbjct: 261 AIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 320

Query: 179 LYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             E F   + Q + P  ++Y  LI     +   EKA  L ++M   G   D    S++I 
Sbjct: 321 ARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380

Query: 237 SLTRTNKI--DSSLLQKLYKE------IECD--------------------KIELDGQLL 268
            L +  K+   + LL+ + +       + C                     K++  G + 
Sbjct: 381 MLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440

Query: 269 NDVIV-----GFAKAGDASKAMRFLG------MAQGVGLSPKTATYAAVITALSNSGRTI 317
           N V       G  ++G+   A+             G+   P   +Y+ +I  L   GR  
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +F+E+K  G+ P   +Y +L+ G+ + G  KDA+++ +EM   GV PD  T+S+LI
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D     G+   A  +L+ M      PN+  Y+ ++ G           Q+  +M+  G  
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE------GIEPDTITWNTLIDCHFKCGRY 491
           PD   Y  ++    +   +  A+    +MLS+        +PD I+++ +ID   K GR 
Sbjct: 621 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 680

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A ELF+EM+  G  P   +Y  +I+      + ED K L   M  QG+  N VTY+ +
Sbjct: 681 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740

Query: 552 VDIYGQSGRFDDAI 565
           +  + + G+ D A+
Sbjct: 741 IHGFCKEGQIDKAL 754



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 208/483 (43%), Gaps = 53/483 (10%)

Query: 167 SILIHALGRSEKLYEA--FLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
            +LI    +  K+ EA   L    QR   L  +TY+ LI        + +A  L   M++
Sbjct: 14  GVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 73

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D I Y  +++ L +T KI+ +L              L  ++LND           
Sbjct: 74  LGCRPDAIAYGTLMKGLCQTGKINIAL-------------HLHQEMLNDT---------- 110

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
                      G+   P   +Y+ +I  L    R  EA  +F+E+K  G+ P   +Y +L
Sbjct: 111 --------SQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSL 162

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G+ + G  + A+ + +EM   G+  D  T S+LID     G+   A  +L+ M     
Sbjct: 163 IHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 222

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
             +   YS ++ G   +       ++   M+  G  PD   Y  ++    +   ++ A+ 
Sbjct: 223 ILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQ 282

Query: 462 AFDRMLSE----GI--EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
               ML++    GI  +P  I+++ +ID   K  R D A ELF+EM+ +G  P   +Y  
Sbjct: 283 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTT 342

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+      +WE  K L   M   G+ P+V T + L+D+  + G+  +A + LE      
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE------ 396

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                V+   G  P  +   +L+       R ++A  +   M++ G  P+VVT  TLMK 
Sbjct: 397 -----VVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451

Query: 636 LIR 638
           L +
Sbjct: 452 LCQ 454



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 191/430 (44%), Gaps = 60/430 (13%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F K G   +A   L +    G      TY+ +I  L    R  EA  +F  +K+ G +P 
Sbjct: 20  FCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 79

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEM----ERSGVL--PDEHTYSLLIDAYANAGRWES 388
             AY  L+KG  + G +  A  +  EM     + G+   P   +YS++ID      R + 
Sbjct: 80  AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDE 139

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           AR + KEM+     P+   Y+ ++ G+   G+W++   +  EM   G+  D    +++ID
Sbjct: 140 ARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLID 199

Query: 449 TFGKYN-------------------------------CLHH----AMAAFDRMLSEGIEP 473
              K                                 C+ H    A   F  M   G  P
Sbjct: 200 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRP 259

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYF-----PCTTTYNIMINLLGEQERWE 527
           D I + TL+    + G  + A +L +EM  + G +     P   +Y+I+I+ L +  R +
Sbjct: 260 DAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           + + L   M+AQG++P+V++YTTL+  +  SG+++ A +CL          F  M   G+
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKA-KCL----------FNEMLDVGI 368

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +P     + LI+   +  +  EA  +L+ + + G  PDVVT TTL+K L    +  K  +
Sbjct: 369 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK--A 426

Query: 648 SYLFFNIYKM 657
           + LF  + K+
Sbjct: 427 TQLFLKMQKL 436



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 165/359 (45%), Gaps = 15/359 (4%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VG+ P   T   +I      G+ IEA  + E + + G       Y+ L+KG      + +
Sbjct: 4   VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISE 63

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSH----AKPNSFI 407
           A  +   M++ G  PD   Y  L+      G+   A  + +EM  + S      KP    
Sbjct: 64  ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS 123

Query: 408 YSRILAGY-RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           YS I+ G  +DR E     ++ KEMK+ G+ PD   Y  +I  F +      A   F+ M
Sbjct: 124 YSIIIDGLCKDRRE-DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L  GI  D  T + LID   K G+   A EL E M +RG      TY+ +I  L  + R 
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-LEGLSDQAVNAFRVMRTD 585
            +  RL  +M+  G  P+ + Y TL+    Q+G  + A++   E L+D      +     
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC---- 298

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             KP+ ++ + +I+   +D+R+ EA  + + MK  G+ PDV++YTTL+       K+ K
Sbjct: 299 --KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEK 355



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 7/180 (3%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ML  GI+PD  T   LID   K G+   A EL E M +RG      TY+ +I  L  + R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-LEGLSDQAVNAFRVMRT 584
             +  +L  +M+  G  P+ + Y TL+    Q+G+ + A+    E L+D +    +    
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC--- 117

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              KP+ ++ + +I+   +D+R+ EA  + + MK  G+ PDV++YT+L+    R  K+ K
Sbjct: 118 ---KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEK 174



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 166 YSILIHALGRSEKLYEAF----LLSQRQRL-TPLTYNALISACARNDDLEKALNLMSKMR 220
           +S+LI  L +  K+ EA     ++ QR  +   +TY  L+     ND + +A  L  KM+
Sbjct: 556 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 615

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV------G 274
           + G   D + Y  +++ L +T  I ++L  +L+K++  D  +       DVI       G
Sbjct: 616 KLGCLPDVVTYGTLMKGLCQTGNIKTAL--ELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             K G   +A       + +G+ P   +Y ++I     SG+  +A+ +F E+ + G++  
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733

Query: 335 TKAYNALLKGYVKMGYLKDAEF 356
              Y+ ++ G+ K G +  A F
Sbjct: 734 AVTYSVMIHGFCKEGQIDKALF 755



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELL-YSILIHAL---GRSEKLYE 181
           + +L+K LC +    ++++L   ++S   ++   +  +++ YSI+I  L   GR ++  E
Sbjct: 626 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 685

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   +   + P  ++Y +LI    R+  LE A +L ++M   G   + + YS++I    
Sbjct: 686 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745

Query: 240 RTNKIDSSLLQKL 252
           +  +ID +L QK+
Sbjct: 746 KEGQIDKALFQKM 758


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 219/458 (47%), Gaps = 17/458 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T++ LI+   +   L++A +L + M + G   D + YS++I  L R  K++      L+
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEG--NSLF 333

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                  +++D  + + ++  + + GD  KA+         G+SP   TY+ +I  L  +
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRN 393

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR +EA  VF ++ + GL+P    Y++L+ G+ K   L+D   +   M R G +PD    
Sbjct: 394 GRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVC 453

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+LI+  +  G  + A     +        N+++++ ++ G       +   ++   M  
Sbjct: 454 SMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGM 513

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             V PD   Y V++    +   L  A+A F ++L +G  PD I + TLID    C + D 
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF--CKKRDP 571

Query: 494 AE--ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           A   ++F+ MQ  G FP    YN++IN+   +   E+V  LL  +   GL P++VTY T+
Sbjct: 572 ATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C   +  +A+  F V++    +P+ +    LI+A+ +D R  +A 
Sbjct: 632 ICGY-----------CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +   M E G +P+++TY+ L+    + +     F  Y
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 252/535 (47%), Gaps = 34/535 (6%)

Query: 122 RAVPAP--LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           R+ P+P  +  S L N+      +D A+++ + + +  +     ++YSILI+ L R+ KL
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL-VIYSILINGLFRAGKL 326

Query: 180 YE-----AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            E     +  L++  ++  + +++++ A  R  DL KA+ + ++M ++G   + + YS++
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  L R  ++  +    ++ +I    +E      + +I GF K+ +        G+    
Sbjct: 387 INGLCRNGRVLEAC--GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P     + +I  LS  G   EA   F +  + GL      +NAL+ G  ++   +D 
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M    V+PD  TY++L+   A  GR + A  +  ++      P+  IY  ++ G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  + +     Q+ K M+S+G+ PD   YNV+I+ F +  C+ + +     ++  G+EPD
Sbjct: 565 FCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+NT+I  +     + +A +LFE ++     P   T+ I+I+   +  R +D   +  
Sbjct: 625 IVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEG 570
           +M  +G  PN++TY+ L+D Y ++   + A E                        C +G
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           L ++A  AF+      L P  +A   LI  + +  R AEA  +  +M  NG+ PD
Sbjct: 745 LMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/479 (22%), Positives = 199/479 (41%), Gaps = 53/479 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            Y+ L+    RN  +++A++  + M + G        S ++  L  +++ID  L  + Y+
Sbjct: 142 VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVIL--ENYE 199

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+ C  + +   + N     F K G+  K + F       GL PK      ++  L    
Sbjct: 200 EM-CKGLGVYEFVFNS----FLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +   A   F+ +  SG  P    ++ L+  Y K   L +A  + + M   G++PD   YS
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI+    AG+ E    +         K +  I+S I+  Y   G+  +  +V   M   
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P+   Y+++I+   +   +  A   F ++L +G+EP  +T+++LID   K       
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL------------- 541
             L+  M  +G+ P     +++IN L  Q   ++  R       +GL             
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 542 ----------------------LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                                 +P+VVTYT LV    + GR D+A+             F
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF----------F 544

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++++  G  P ++   +LI+ F + +  A    + + M+ NG+ PD+  Y  L+    R
Sbjct: 545 QLLKK-GFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 155/369 (42%), Gaps = 8/369 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLY 180
           VP  +  S+L N  S    +D A        K  L  +   L++ LI     L R+    
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN-NYLFNALIDGCFRLKRTRDGL 505

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           + ++L    ++ P  +TY  L+   A    L++AL L  ++ + G+  D I Y  +I   
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K D +   +++K ++ + I  D  + N +I  F + G     +  L      GL P
Sbjct: 566 CK--KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I    +     +A  +FE LK    +P    +  L+  Y K G + DA  + 
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           S M   G  P+  TYS LID Y      ESA  + ++M      PN   YS ++ G   +
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  +      +      + PD   Y ++I  + K   L  AM  +D ML  GI PD +  
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQ 803

Query: 479 NTLIDCHFK 487
             L +  F+
Sbjct: 804 KALAEYGFQ 812


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 221/473 (46%), Gaps = 19/473 (4%)

Query: 184 LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           L+  R+R   L  +TYN LI+   R+  +E+A      M   G   D   Y  +I  L +
Sbjct: 245 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 304

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           + + + +  + L  E+ C +++ +  +  ++I GF + G+A +A + +      G+ P  
Sbjct: 305 SRRSNEA--KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNK 362

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  ++  L   G+   A  + +++     +P T  YN +++G+ +    KDA  ++SE
Sbjct: 363 ITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSE 422

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ME +G+ P+ +TYS++I     +G  E A  +L+EM     KPN+F+Y+ +++GY   G 
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++  +M    V PD + YN +I    K   +  +   F +M   G+ P+  T++ 
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI  + K G  + AE+L + M + G  P    Y  ++    + +  E V     +M  QG
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           ++ +   Y  L+     SG  + A   L G+             +G  P     +SLI+ 
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGI-----------EKNGSVPDVHVYSSLISG 651

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
             +     +AF +L  M + G+ P++V Y  L+  L +   +     VF+S L
Sbjct: 652 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSIL 704



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 169/355 (47%), Gaps = 24/355 (6%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A+ V  E++E G    T  YN L+ G  + G +++A     +ME  G++PD  TY  LI+
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 300

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
               + R   A+ +L EM  +  KPN  +Y+ ++ G+   G     F+++KEM ++GV+P
Sbjct: 301 GLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 360

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   Y+ ++    K   +  A     +M+ +   PDTIT+N +I+ HF+      A  L 
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 420

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM+  G  P   TY+IMI+ L +    E    LL  M  +GL PN   Y  L+  Y + 
Sbjct: 421 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 480

Query: 559 GRFDDAIECLE-------------------GLS-----DQAVNAFRVMRTDGLKPSNLAL 594
           G    A E  +                   GLS     +++   F  M+  GL P+    
Sbjct: 481 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 540

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + LI+ + ++     A  ++Q M + GLKP+ V Y  L+++  + D   KV S++
Sbjct: 541 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 250/562 (44%), Gaps = 35/562 (6%)

Query: 119 ESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
           E Y  VP    + +L+  LC S  S + A A++  +    L  +  ++Y+ LI    R  
Sbjct: 284 EDYGLVPDGFTYGALINGLCKSRRSNE-AKALLDEMSCAELKPNV-VVYANLIDGFMREG 341

Query: 178 KLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
              EAF     +++   +   +TY+ L+    +   +++A  L+ +M +D +  D I Y+
Sbjct: 342 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           L+I+   R +    +   +L  E+E   I  +    + +I G  ++G+  KA   L    
Sbjct: 402 LIIEGHFRHHSKKDAF--RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P    YA +I+     G    A  +F+++ +  + P    YN+L+ G  K+G ++
Sbjct: 460 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 519

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           ++    ++M+  G+LP+E TYS LI  Y   G  ESA  +++ M  +  KPN  IY  +L
Sbjct: 520 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 579

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
             Y    + ++     K M   GV  D   Y ++I        +  A      +   G  
Sbjct: 580 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 639

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD   +++LI    K    ++A  + +EM ++G  P    YN +I+ L +       + +
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 699

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI----ECLE-GLSDQAVNAFRVMRTDGL 587
             ++ A+GL+PN VTYT+L+D   + G   +A     E L  G++  A   + V+ T   
Sbjct: 700 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAF-VYSVLTTGCS 758

Query: 588 KPSNL-------------------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
              +L                   + N+L++ F +  +  E   +L  +   GL P+ +T
Sbjct: 759 SAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 818

Query: 629 YTTLMKALIRVDKFHKVFSSYL 650
              ++  L    K  +V + ++
Sbjct: 819 IENIISGLSEAGKLSEVHTIFV 840



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 229/520 (44%), Gaps = 54/520 (10%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR-----QRLTPLTYNALISACARNDDLEKALNLMS 217
           ++ Y  L+  L +  ++  A LL ++      R   +TYN +I    R+   + A  L+S
Sbjct: 362 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   +   YS++I  L ++ + + +    L +E+    ++ +  +   +I G+ +
Sbjct: 422 EMENAGISPNVYTYSIMIHGLCQSGEPEKA--SDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+ S A         V + P    Y ++I  LS  GR  E+   F +++E GL P    
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLP----------------------------- 368
           Y+ L+ GY+K G L+ AE +V  M  +G+ P                             
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 369 ------DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
                 D   Y +LI   +++G  E+A  VL  +E + + P+  +YS +++G     + +
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           + F +L EM   GV+P+   YN +ID   K   + +A   F+ +L++G+ P+ +T+ +LI
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G    A  L+ EM   G  P    Y+++          E    L+  M  +G  
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-H 778

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            ++ ++  LVD + + G+  + ++ L            V+   GL P+ L + ++I+   
Sbjct: 779 ASISSFNNLVDGFCKRGKMQETLKLLH-----------VIMGRGLVPNALTIENIISGLS 827

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           E  + +E   +   +++   +     +++L   +I   K 
Sbjct: 828 EAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 867



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 138/304 (45%), Gaps = 11/304 (3%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           + + L+ Y K+     A+ V+ EM   G   +  TY++LI     +G  E A    K+ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+ F Y  ++ G            +L EM  + ++P+   Y  +ID F +     
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A      M++ G++P+ IT++ L+    K G+ DRA  L ++M    + P T TYN++I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                    +D  RLL  M   G+ PNV TY+ ++    QSG  + A + LE        
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE-------- 456

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M T GLKP+      LI+ +  +   + A  +   M +  + PD+  Y +L+  L 
Sbjct: 457 ---EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 513

Query: 638 RVDK 641
           +V +
Sbjct: 514 KVGR 517



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 175/418 (41%), Gaps = 68/418 (16%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMS 217
           E  YS LIH   ++  L  A  L QR   T L      Y  L+ +  ++DD+EK  +   
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   Y ++I +L+ +  ++++   ++   IE +    D  + + +I G  K
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAF--RVLSGIEKNGSVPDVHVYSSLISGLCK 654

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             D  KA   L      G+ P    Y A+I  L  SG    A  VF  +   GL P    
Sbjct: 655 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 714

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G  K+G + +A ++ +EM  +G+ PD   YS+L    ++AG  E A  +++EM 
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774

Query: 398 V-SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKY 453
           +  HA  +SF  + ++ G+  RG+ Q T ++L  +   G+ P+      +I      GK 
Sbjct: 775 LRGHASISSF--NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832

Query: 454 NCLH----------------HAMAAFDRMLSEGIEP------------------------ 473
           + +H                H  + F  M+++G  P                        
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 892

Query: 474 DTI----------TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
           D I          ++  ++D   + G+   A  L +EM +RG    T     ++ LLG
Sbjct: 893 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPT-----LVALLG 945


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 223/495 (45%), Gaps = 49/495 (9%)

Query: 177 EKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           E++Y   +  Q  R T +T+N ++ +  +  ++ +A+ ++  MR  G   + ++Y++++ 
Sbjct: 192 EEVYSVMIKCQ-IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA------------------ 278
            L+   + D +  ++L +++    +++     N +I GF K                   
Sbjct: 251 GLSGKGEFDRA--KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308

Query: 279 -----------------GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
                            G  S A R+L +     L P   +Y  +I   S  G   EA  
Sbjct: 309 LPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F EL+   L P    YN L+ G  + G L  A+ +  +M + G+ PD  T+++L+  + 
Sbjct: 369 LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFC 428

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    A+ +  EM     KP+   Y+  + G    G   + F + +EMK+ G  PD  
Sbjct: 429 QMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLI 488

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YNV+I+   K      A     +M  EGI PD +T+ ++I  H   G   +AEE+F +M
Sbjct: 489 TYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDM 548

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ++G  P   TY ++I+    + R +  K+    M+ +G+ PNV+TY  L  IYG     
Sbjct: 549 LKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL--IYGL---- 602

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C E + D A N F  M + G+ P+      LIN     Q   +A  + + M +  
Sbjct: 603 -----CKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657

Query: 622 LKPDVVTYTTLMKAL 636
           +KPD  T++ LMK L
Sbjct: 658 IKPDSCTHSALMKHL 672



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 207/477 (43%), Gaps = 48/477 (10%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + LI   A+   LEK L +  KM  +G   D  N + V++ L   + ++   ++++Y  +
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE--VEEVYSVM 198

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
              +I       N ++    K G+  +A+  L + +  G  P   +Y  ++  LS  G  
Sbjct: 199 IKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEF 258

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A+ + E++   GLK     YN L++G+ K    ++A  +  EM   G LP   TY+ +
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           + +    GR   AR  L  M      P+   Y+ ++ GY   G +     +  E++S  +
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378

Query: 437 EPDTHFYNVMIDT-----------------------------------FGKYNCLHHAMA 461
            P    YN +ID                                    F +   L  A  
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            FD MLS G++PD I + T I    K G   +A  + EEM+  G+ P   TYN++IN L 
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +   ++D   L+  MR +G++P+ VTYT+++  +            + GL  +A   F  
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH-----------LISGLLRKAEEVFSD 547

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           M   G+ PS +    LI+++    R   A      M++ G+ P+V+TY  L+  L +
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 185/401 (46%), Gaps = 13/401 (3%)

Query: 243 KIDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           K+D  +L  L   I C +  E+  +LL+ +I  FAK     K +         GL P   
Sbjct: 115 KVDGGVLDVLVG-IGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVR 173

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
               V+  L +     E E V+  + +  ++P    +N ++    K G +  A  V+  M
Sbjct: 174 NCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVM 233

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G  P++ +Y++L++  +  G ++ A+ ++++M +   K ++  Y+ ++ G+  +  +
Sbjct: 234 RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF 293

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    + +EM   G  P    YN ++ +  +   +  A    D M++E + PD +++NTL
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I  + + G +  A  LF E++ +   P   TYN +I+        +  K +  +M   GL
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+VVT+T LV  + Q G    A E            F  M + GLKP  +A  + I   
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKEL-----------FDEMLSRGLKPDCIAYTTRIVGE 462

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +    ++AF + + MK  G  PD++TY  L+  L ++  F
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 6/341 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQK 251
           ++YN LI   +R  +  +AL L S++R        + Y+ +I    RT  +D    +   
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + K   C     D      ++ GF + G+   A          GL P    Y   I    
Sbjct: 408 MIKHGLCP----DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   +A  + EE+K  G  P    YN L+ G  K+G   DA  +V +M   G++PD  
Sbjct: 464 KLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHV 523

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ +I A+  +G    A  V  +M      P+   Y+ ++  Y  RG      +   EM
Sbjct: 524 TYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEM 583

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  GV P+   YN +I    K N +  A   F  M S+G+ P+  T+  LI+ +     +
Sbjct: 584 QDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYW 643

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
             A +L+++M +R   P + T++ ++  L +  +   V RL
Sbjct: 644 QDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 166/388 (42%), Gaps = 27/388 (6%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           ++++DG +L DV+VG     ++  +++ L +               +I   +      + 
Sbjct: 113 EVKVDGGVL-DVLVGIGCGRNSEVSVKLLDL---------------LIQVFAKKLILEKC 156

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             VF ++  +GL P  +  N +LK       + + E V S M +  + P   T++ ++D+
Sbjct: 157 LMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDS 216

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
               G    A  VL  M +    PN   Y+ ++ G   +GE+ R  +++++M   G++  
Sbjct: 217 RCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVS 276

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            H YN +I  F K      A      ML  G  P  +T+NT++    + GR   A    +
Sbjct: 277 AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLD 336

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M      P   +YN +I        + +   L   +R++ L+P+VVTY TL+D   ++G
Sbjct: 337 VMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG 396

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
             D A    +G+ D  +         GL P  +    L+  F +      A  +   M  
Sbjct: 397 NLDIA----KGMKDDMIK-------HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLS 445

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            GLKPD + YTT +   +++    K F 
Sbjct: 446 RGLKPDCIAYTTRIVGELKLGNPSKAFG 473


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 243/525 (46%), Gaps = 26/525 (4%)

Query: 125 PAPLWHSLLKNLCS-SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLY 180
           P P  H L + L   + +SI   +  ++   +  L +   +++  LI +   + R+++ +
Sbjct: 113 PKPALHLLKQALGGGTTNSIREIFEFLAA-SRDRLGFKSSIVFDYLIKSCCDMNRADEAF 171

Query: 181 EAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           E F   + + + P   T N+L+S   + +  E A  L ++M +         ++++I  L
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K+  +  +     +E   ++ +    N ++ G+  +G    A   L   +   + P
Sbjct: 232 CKEGKLKKA--KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
            + TY ++I+ +   GR  EA  +FEE+ + GL+P    YN L+ G+   G L  A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM + G+ P   TY+ LI A     R + A  ++KE++     P++  Y+ ++ GY   
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
              ++ F +  EM +SG++P    Y  ++    K N +  A   F ++ SEG+ PD I +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N LID H        A EL ++M      P   T+N ++     + + E+ + L   M+ 
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDGLKPSNLALN 595
           +G+ P+ +++ TL+  Y + G   D              AFRV   M   G  P+ L  N
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKD--------------AFRVRNEMLDTGFNPTVLTYN 575

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           +L+    ++Q    A  +L+ M   G+ PD  TY TL++ + +V+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T  ++++      RT  A  ++ E+    +K     +N ++    K G LK A
Sbjct: 181 GVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKA 240

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           +  V  ME SGV P+  TY+ ++  Y ++GR E+A  +L  M+    +P+SF Y  +++G
Sbjct: 241 KDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISG 300

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
              +G  +   ++ +EM   G+ P    YN +ID F     L  A A  D ML +GI P 
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPT 360

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N+LI   F   R D AE + +E+QE+G  P   TYNI+IN        +    L  
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M A G+ P   TYT+L+ +  +  R             +A + F+ + ++G+ P  +  
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMK-----------EADDLFKKITSEGVLPDVIMF 469

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           N+LI+    +     AF +L+ M    + PD VT+ T+M+   R  K
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 18/350 (5%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKES----GLKPRTKAYNALLKGYVKMGYLK 352
           SPK A +  ++      G T     +FE L  S    G K  +  ++ L+K    M    
Sbjct: 112 SPKPALH--LLKQALGGGTTNSIREIFEFLAASRDRLGFK-SSIVFDYLIKSCCDMNRAD 168

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A      M+  GVLP   T + L+  +    R E+A ++  EM     K + + ++ ++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G+ ++    +  M++SGV+P+   YN ++  +     +  A A    M  + IE
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD+ T+ +LI    K GR + A ++FEEM ++G  P    YN +I+    +   +     
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G+ P + TY +L+       R D+A EC+           + ++  G+ P  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEA-ECM----------IKEIQEKGISPDAI 397

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             N LIN +       +AF +   M  +G+KP   TYT+L+  L + ++ 
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 245/536 (45%), Gaps = 33/536 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           +++L+  LC  + ++D A+     + K  +  +  + YS+LI+ L + EK  EA  +   
Sbjct: 284 YNNLIHGLCK-HGNLDEAFRFKEKMVKDGVNATL-ITYSVLINGLMKLEKFNEANSVLKE 341

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  +  TP  + YN LI    +  +L  AL +   M   G + + +  + +IQ   +  +
Sbjct: 342 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 401

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ +  + + +E+      ++      +I           A+RFL       + P     
Sbjct: 402 MEQA--ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   G+  +A  ++  L E G        NAL+ G  K G +++A  ++ +M  
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G + D+ TY+ LI      G+ E    +  EM     +P++F Y+ ++ G    G+   
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +  E KS  + P+ + Y VMID + K + +      F  +L++ +E +++ +NTLI 
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            + + G    A +L ++M+ +G  P T TY+ +I+ +    R ED K L+  MR +GLLP
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---------------------- 581
           NVV YT L+  Y + G+ D  +  L+ +S   ++  ++                      
Sbjct: 700 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLL 759

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             M   G+ P  +  N L N F ++ +  E F +  YM + GL  D +TYTTL+  
Sbjct: 760 HEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 224/499 (44%), Gaps = 40/499 (8%)

Query: 165 LYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           L+S  I+A    G+ E   + F   ++  ++P  +TYN LI    ++ +L++A     KM
Sbjct: 248 LFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 220 RQDGYHCDFINYSLVIQSLTRT---NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            +DG +   I YS++I  L +    N+ +S L + L K    +++     + N +I G+ 
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV-----VYNTLIDGYC 362

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K G+   A+R  G     G++P + T  ++I      G+  +AE + EE+   G      
Sbjct: 363 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 422

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
           A+  ++         + A   + EM    + P++   + L+      G+   A     R+
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + K    +    N+ I+     G    G  Q   ++LK+M   G   D   YN +I    
Sbjct: 483 LEKGFGANLVTTNALIH-----GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCC 537

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +         M+ +GIEPDT T+N LI    + G+ D A  L+ E + R   P   
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY +MI+   + ++ E+ ++L   +  Q L  N V Y TL+  Y ++G            
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG------------ 645

Query: 572 SDQAVNAFRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               V AF++   MR+ G+ P+    +SLI+      R  +A  ++  M++ GL P+VV 
Sbjct: 646 --NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 629 YTTLMKALIRVDKFHKVFS 647
           YT L+    ++ +  KV +
Sbjct: 704 YTALIGGYCKLGQMDKVVN 722



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/499 (22%), Positives = 201/499 (40%), Gaps = 66/499 (13%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK--IE 262
           RN     A+ +   +   G        + ++ SL + N+     L+K Y   E  +  + 
Sbjct: 189 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANE-----LEKSYWVFETMRQGVS 243

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  L +  I  F K G    A++     + +G+SP   TY  +I  L   G   EA   
Sbjct: 244 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF 303

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E++ + G+      Y+ L+ G +K+    +A  V+ E    G  P+E  Y+ LID Y  
Sbjct: 304 KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 363

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------- 435
            G    A  +  +M      PNS   + I+ G+   G+ ++   +L+EM S G       
Sbjct: 364 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 423

Query: 436 ----------------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
                                       + P+      ++    K      A+  + R+L
Sbjct: 424 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 483

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G   + +T N LI    K G    A  L ++M ERG+     TYN +I+   ++ + E
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI----EC---------------L 568
           +  +L G M  QG+ P+  TY  L+    + G+ D+A+    EC               +
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603

Query: 569 EGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           +G       ++    F  + T  L+ +++  N+LI A+  +    EAF +   M+  G+ 
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663

Query: 624 PDVVTYTTLMKALIRVDKF 642
           P   TY++L+  +  + + 
Sbjct: 664 PTTATYSSLIHGMCNIGRM 682



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 87/407 (21%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           FT ++++L  NS  ESA         L  +   L  + R     L  +L+  LC      
Sbjct: 424 FTTIIHWLCMNSRFESA---------LRFLREMLLRNMRPNDG-LLTTLVGGLCKEGKHS 473

Query: 144 DLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAFLLSQRQR-----LTPLTYN 197
           D   AV  W +     +   L+ +  LIH L ++  + EA  L ++       L  +TYN
Sbjct: 474 D---AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYN 530

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--------- 248
            LIS C +   +E+   L  +M + G   D   Y+L+I  + R  K+D ++         
Sbjct: 531 TLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 590

Query: 249 ------------------------LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
                                    +KL+ E+    +EL+  + N +I  + + G+  +A
Sbjct: 591 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 650

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
            +     +  G+ P TATY+++I  + N GR  +A+ + +E+++ GL P    Y AL+ G
Sbjct: 651 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710

Query: 345 YVKMGYL-----------------------------------KDAEFVVSEMERSGVLPD 369
           Y K+G +                                   K A  ++ EM   G++PD
Sbjct: 711 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
             TY++L + +   G+ E    +   M       +   Y+ ++ G++
Sbjct: 771 TVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQ 817



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 7/197 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSK 218
           ++Y+ LI A  R+    EAF L    R      T  TY++LI        +E A  L+ +
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR++G   + + Y+ +I    +  ++D  +   + +E+    I  +      +I G++K+
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVV--NVLQEMSSYDIHPNKITYTVMIDGYSKS 749

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD   A + L    G G+ P T TY  +       G+  E   + + + + GL      Y
Sbjct: 750 GDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITY 809

Query: 339 NALLKGYVKMGYLKDAE 355
             L+ G+ +   L + E
Sbjct: 810 TTLVHGWQQPSALTNQE 826


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 249/527 (47%), Gaps = 24/527 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQ 187
           +S+L N     S + LA AV++ + K  L Y  +++  + L++      ++ +A  L+ Q
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMK--LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176

Query: 188 RQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +       T+N LI    R++   +A+ L+ +M   G   D + Y +V+  L +   
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +L   L K++E  KIE    + N +I       + + A+         G+ P   TY
Sbjct: 237 IDLAL--SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I  L N GR  +A  +  ++ E  + P    ++AL+  +VK G L +AE +  EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TYS LI+ +    R + A+ + + M      PN   Y+ ++ G+        
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  +T  Y  +I  F +     +A   F +M+S+G+ PD +T++ L+D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G+ + A  +FE +Q     P   TYNIMI  + +  + ED   L  ++  +G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTYTT++  +           C +GL ++A   FR M+ +G  P +   N+LI A   
Sbjct: 535 NVVTYTTMMSGF-----------CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK-FHKVFS 647
           D   A +  +++ M+      D  T   +   L   R+DK F K+ S
Sbjct: 584 DGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 215/468 (45%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ LI+   R   L  AL +++KM + GY  D +  + ++      N+I  ++   L  
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV--SLVG 175

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     + D    N +I G  +   AS+A+  +      G  P   TY  V+  L   G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++ +++++  ++P    YN ++        + DA  + +EM+  G+ P+  TY+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    N GRW  A  +L +M      PN   +S ++  +   G+     ++  EM   
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            ++PD   Y+ +I+ F  ++ L  A   F+ M+S+   P+ +T+NTLI    K  R D  
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF EM +RG    T TY  +I+   +    ++ + +   M + G+LP+++TY+ L+D 
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475

Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
              +G+ + A+                         C  G  +   + F  +   G+KP+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +   ++++ F       EA A+ + MKE G  PD  TY TL++A +R
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 202/449 (44%), Gaps = 13/449 (2%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A+NL   M +       + +S ++ ++ + NK D  L+  L ++++   I  +    
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 119

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           + +I  F +    S A+  L     +G  P   T  +++    +  R  +A ++  ++ E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P +  +N L+ G  +     +A  +V  M   G  PD  TY ++++     G  + 
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+ME    +P   IY+ I+    +         +  EM + G+ P+   YN +I 
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+   I P+ +T++ LID   K G+   AE+L++EM +R   P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ +IN     +R ++ K +   M ++   PNVVTY TL+  + ++ R D+ +E  
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME-- 417

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL  + +   +LI+ F + +    A  V + M  +G+ PD++T
Sbjct: 418 ---------LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
           Y+ L+  L    K       + +    KM
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKM 497



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 11/149 (7%)

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D A  LF +M +   FP    ++ +++ + +  +++ V  L   M+  G+  N+ TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++ + +  +   A+  L           ++M+  G +P  + LNSL+N F    R ++
Sbjct: 121 ILINCFCRRSQLSLALAVLA----------KMMKL-GYEPDIVTLNSLLNGFCHGNRISD 169

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A +++  M E G +PD  T+ TL+  L R
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 241/533 (45%), Gaps = 31/533 (5%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLT 195
           S +     V S +  +  C S  L++ +L+    ++ KL E       L S+   ++   
Sbjct: 5   SGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 64

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
            N+L+    +   ++ A  +  ++ + G   +    +++I +L +  KI+++  +    +
Sbjct: 65  CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT--KSFLSD 122

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   +  D    N +I  + + G   +A   +    G GL P   TY A+I  L  +G+
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A+ V +E+ + G+ P T  YN LL    +   + DAE +  EM   GV+PD  ++S 
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI   +  G  + A    ++M+ +   P++ IY+ ++ G+   G      +V  EM   G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              D   YN +++   K   L  A   F  M   G+ PD  T+ TLI+ + K G  ++A 
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            LFE M +R   P   TYN +I+   +    E V  L  +M ++ + PN ++Y  L++ Y
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422

Query: 556 GQSG-------RFDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
              G        +D+ +E                 C  G + +A      M   G+ P  
Sbjct: 423 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 482

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  N+LIN F +++    AFA++  M+ +GL PDV+TY  ++    R  +  +
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 535



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 216/466 (46%), Gaps = 20/466 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  R   L EAF L      + L P   TYNA+I+   +     +A  ++ +M 
Sbjct: 135 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 194

Query: 221 QDGYHCDFINYSLVIQSLTRT-NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + G   D   Y++++    R  N +D+   ++++ E+    +  D    + +I   +K G
Sbjct: 195 KIGMSPDTATYNILLVECCRNDNMMDA---ERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+++    +  GL+P    Y  +I     +G   EA  V +E+ E G       YN
Sbjct: 252 CLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYN 311

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +L G  K   L +A+ + +EM   GV PD +T++ LI+ Y+  G    A  + + M   
Sbjct: 312 TILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 371

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           + KP+   Y+ ++ G+    E ++  ++  +M S  + P+   Y ++I+ +    C+  A
Sbjct: 372 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEA 431

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +D M+ +G E   IT NT++  + + G   +A+E    M  +G  P   TYN +IN 
Sbjct: 432 FRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING 491

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             ++E  +    L+  M   GLLP+V+TY  +++ + + GR  +A   +  + ++ VN  
Sbjct: 492 FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN-- 549

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                    P      SLIN         EAF V   M + G  PD
Sbjct: 550 ---------PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 232/530 (43%), Gaps = 46/530 (8%)

Query: 153 LQKHNLCYSYELLYSIL-----IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARND 207
           L+   LC S     S+L     +  +  + ++Y+  + S  Q +   T N +I+A  +N 
Sbjct: 53  LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQ-VNVYTLNIMINALCKNQ 111

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            +E   + +S M + G   D + Y+ +I +  R       LL++ ++ ++     + G+ 
Sbjct: 112 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR-----QGLLEEAFELMD----SMSGKG 162

Query: 268 L-------NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           L       N +I G  K G   +A   L     +G+SP TATY  ++     +   ++AE
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +F+E+   G+ P   +++AL+    K G L  A     +M+ +G+ PD   Y++LI  +
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G    A  V  EM       +   Y+ IL G           ++  EM   GV PD 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + +  +I+ + K   ++ A+  F+ M+   ++PD +T+NTLID   K    ++  EL+ +
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M  R  +P   +Y I+IN         +  RL   M  +G    ++T  T+V  Y ++G 
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 561 FDDAIECL----------EGLS--------------DQAVNAFRVMRTDGLKPSNLALNS 596
              A E L          +G++              D+A      M   GL P  +  N 
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++N F    R  EA  ++  M E G+ PD  TYT+L+   +  +   + F
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 572



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 203/480 (42%), Gaps = 28/480 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           PL ++ L+    +   L +       ++  G        + ++  L +   +D  L  ++
Sbjct: 27  PLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD--LAWEI 84

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           Y+E+    ++++   LN +I    K         FL   +  G+ P   TY  +I A   
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G   EA  + + +   GLKP    YNA++ G  K G    A+ V+ EM + G+ PD  T
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 373 YS-LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           Y+ LL++   N    ++ RI   EM      P+   +S ++      G   +  +  ++M
Sbjct: 205 YNILLVECCRNDNMMDAERI-FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K++G+ PD   Y ++I  F +   +  A+   D ML +G   D +T+NT+++   K    
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A+ELF EM ERG FP   T+  +IN   +         L   M  + L P+VVTY TL
Sbjct: 324 SEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTL 383

Query: 552 VDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGL 587
           +D + +    +   E                        C  G   +A   +  M   G 
Sbjct: 384 IDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGF 443

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + + +  N+++  +       +A   L  M   G+ PD +TY TL+   I+ +   + F+
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 503



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 158/335 (47%), Gaps = 17/335 (5%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F  LK  GL     A N+LL G VK+G++  A  +  E+ RSGV  + +T +++I
Sbjct: 45  EGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMI 104

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     + E+ +  L +ME     P+   Y+ ++  Y  +G  +  F+++  M   G++
Sbjct: 105 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLK 164

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR---A 494
           P    YN +I+   K      A    D ML  G+ PDT T+N L+    +C R D    A
Sbjct: 165 PCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDA 221

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E +F+EM  +G  P   +++ +I LL +    +   +   +M+  GL P+ V YT L+  
Sbjct: 222 ERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI-- 279

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
               G F     C  G+  +A+     M   G     +  N+++N   +++  +EA  + 
Sbjct: 280 ----GGF-----CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF 330

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             M E G+ PD  T+TTL+    +    +K  + +
Sbjct: 331 TEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 154/369 (41%), Gaps = 45/369 (12%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F    S   VP  +  S L  L S N  +D A      ++   L     ++Y+ILI    
Sbjct: 225 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPD-NVIYTILIGGFC 283

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R+  + EA      +L Q   L  +TYN +++   +   L +A  L ++M + G   DF 
Sbjct: 284 RNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFY 343

Query: 230 NYSLVIQSLTRTNKID---------------------SSLLQKLYKEIECDKIELDGQLL 268
            ++ +I   ++   ++                     ++L+    K  E +K+    +L 
Sbjct: 344 TFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN---ELW 400

Query: 269 NDVIV---------------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           ND+I                G+   G  S+A R        G      T   ++     +
Sbjct: 401 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 460

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  ++A+     +   G+ P    YN L+ G++K   +  A  +V++ME SG+LPD  TY
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY 520

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++++ ++  GR + A +++ +M      P+   Y+ ++ G+  +   +  F+V  EM  
Sbjct: 521 NVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580

Query: 434 SGVEPDTHF 442
            G  PD  F
Sbjct: 581 RGFVPDDKF 589



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 118/295 (40%), Gaps = 54/295 (18%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y FT L+N  S++ N   A  L           F++          +  +L  ++ + N+
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTL-----------FEMM---------IQRNLKPDVVTYNT 382

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNAL 199
            ID              C   E+            EK+ E +  ++S+R     ++Y  L
Sbjct: 383 LID------------GFCKGSEM------------EKVNELWNDMISRRIYPNHISYGIL 418

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN---KIDSSLLQKLYKEI 256
           I+       + +A  L  +M + G+    I  + +++   R     K D  L   L K  
Sbjct: 419 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK-- 476

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               I  DG   N +I GF K  +  +A   +   +  GL P   TY  ++   S  GR 
Sbjct: 477 ---GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRM 533

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            EAE +  ++ E G+ P    Y +L+ G+V    LK+A  V  EM + G +PD+ 
Sbjct: 534 QEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 208/415 (50%), Gaps = 14/415 (3%)

Query: 226 CDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           C   + + +I+ L   N+ D ++   +   + E  K E  G+L + +I    + G  + A
Sbjct: 194 CGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNE-QGKLASAMISTLGRYGKVTIA 252

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
            R    A   G       ++A+I+A   SG   EA +VF  +KE GL+P    YNA++  
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312

Query: 345 YVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
             K G   K       EM+R+GV PD  T++ L+   +  G WE+AR +  EM     + 
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           + F Y+ +L      G+    F++L +M    + P+   Y+ +ID F K      A+  F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M   GI  D +++NTL+  + K GR + A ++  EM   G      TYN ++   G+Q
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            ++++VK++   M+ + +LPN++TY+TL+D Y + G + +A+E            FR  +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI-----------FREFK 541

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + GL+   +  ++LI+A  ++     A +++  M + G+ P+VVTY +++ A  R
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 37/437 (8%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           +S LI A GRS   E+    F   +   L P  +TYNA+I AC +   + ++      +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +++G   D I ++ ++   +R    +++  + L+ E+   +IE D    N ++    K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAA--RNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   L       + P   +Y+ VI   + +GR  EA  +F E++  G+     +YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  Y K+G  ++A  ++ EM   G+  D  TY+ L+  Y   G+++  + V  EM+  
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           H  PN   YS ++ GY   G ++   ++ +E KS+G+  D   Y+ +ID   K   +  A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT--------- 510
           ++  D M  EGI P+ +T+N++ID   +    DR+ +        G  P +         
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----SNGGSLPFSSSALSALTE 624

Query: 511 TTYNIMINLLGE-------------QERWEDVKRLLGNMRAQGLL---PNVVTYTTLVDI 554
           T  N +I L G+             +E  +++  +L   R    L   PNVVT++ +++ 
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684

Query: 555 YGQSGRFDDAIECLEGL 571
             +   F+DA   LE L
Sbjct: 685 CSRCNSFEDASMLLEEL 701



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 222/504 (44%), Gaps = 73/504 (14%)

Query: 165 LYSILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           L S +I  LGR      +++++E          T   ++ALISA  R+   E+A+++ + 
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGN-TVYAFSALISAYGRSGLHEEAISVFNS 293

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++ G   + + Y+ VI +                    C K  ++ +            
Sbjct: 294 MKEYGLRPNLVTYNAVIDA--------------------CGKGGMEFK------------ 321

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +  +F    Q  G+ P   T+ +++   S  G    A  +F+E+    ++    +Y
Sbjct: 322 ----QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL    K G +  A  ++++M    ++P+  +YS +ID +A AGR++ A  +  EM  
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                +   Y+ +L+ Y   G  +    +L+EM S G++ D   YN ++  +GK      
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F  M  E + P+ +T++TLID + K G Y  A E+F E +  G       Y+ +I+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG----LSDQ 574
            L +         L+  M  +G+ PNVVTY +++D +G+S   D + +   G     S  
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGE--------DQRDAEA--------FAVLQYMK 618
           A++A  +  T+G        N +I  FG+          +D E           V + M 
Sbjct: 618 ALSA--LTETEG--------NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMH 667

Query: 619 ENGLKPDVVTYTTLMKALIRVDKF 642
           +  +KP+VVT++ ++ A  R + F
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSF 691



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 15/266 (5%)

Query: 384 GRWESARIVLKEMEVSHAKP---NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
           GR+    I  +  E + A       + +S +++ Y   G  +    V   MK  G+ P+ 
Sbjct: 244 GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL 303

Query: 441 HFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
             YN +ID  GK       +A F D M   G++PD IT+N+L+    + G ++ A  LF+
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM  R       +YN +++ + +  + +    +L  M  + ++PNVV+Y+T++D + ++G
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           RFD+A+           N F  MR  G+    ++ N+L++ + +  R  EA  +L+ M  
Sbjct: 424 RFDEAL-----------NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKV 645
            G+K DVVTY  L+    +  K+ +V
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEV 498



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 203/474 (42%), Gaps = 71/474 (14%)

Query: 166 YSILIHALGRS----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+ +I A G+     +++ + F   QR  + P  +T+N+L++ C+R    E A NL  +M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                  D  +Y+ ++ ++ +  ++D  L  ++  ++   +I  +    + VI GFAKAG
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMD--LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+   G  + +G++    +Y  +++  +  GR+ EA  +  E+   G+K     YN
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL GY K G   + + V +EM+R  VLP+  TYS LID Y+  G ++ A  + +E + +
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM------------- 446
             + +  +YS ++      G       ++ EM   G+ P+   YN +             
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603

Query: 447 ---------------------------IDTFGKY----------NC------LHHAMAAF 463
                                      I  FG+           +C      L   +  F
Sbjct: 604 ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL-GE 522
            +M    I+P+ +T++ +++   +C  ++ A  L EE++          Y ++  LL G+
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLMGQ 719

Query: 523 QER-WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-IECLEGLSDQ 574
           +E  W   + L   +           Y  L D+    G+   A +  LEG S Q
Sbjct: 720 RENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQ 773



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 18/220 (8%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + MI T G+Y  +  A   F+   + G       ++ LI  + + G ++ A  +F  M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 504 RGYFPCTTTYNIMINLLGEQE-RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            G  P   TYN +I+  G+    ++ V +    M+  G+ P+ +T+ +L+ +  + G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG--- 353

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                   L + A N F  M    ++    + N+L++A  +  +   AF +L  M    +
Sbjct: 354 --------LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            P+VV+Y+T++    +  +F +        N++  + Y G
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEA------LNLFGEMRYLG 439


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 246/524 (46%), Gaps = 24/524 (4%)

Query: 132 LLKNLCSSN----SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           +L N+C  +      +D+A+     ++ + L    E+ Y+ +I  L ++ +L EA   F 
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFE 297

Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++ R  P TY  N +I         ++A +L+ + R  G     I Y+ ++  L +  
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L  ++++E++ D    +    N +I    +AG    A       Q  GL P   T
Sbjct: 358 KVDEAL--RVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRT 414

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  S +  EA A+FE++      P    + +L+ G  K+G + DA  +  +M 
Sbjct: 415 VNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKML 474

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            S    +   Y+ LI  + N GR E    + K+M   +  P+  + +  +      GE +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPE 534

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + +E+KS    PD   Y+++I    K    +     F  M  +G   DT  +N +I
Sbjct: 535 KGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   KCG+ ++A +L EEM+ +G+ P   TY  +I+ L + +R ++   L    +++ + 
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   LE L  +           GL P+    NSL++A  
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNVYTWNSLLDALV 703

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MKE    P+ VTY  L+  L +V KF+K F
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/550 (22%), Positives = 250/550 (45%), Gaps = 34/550 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC +N  +D A  +   L+K N        Y+ +I   G + K  EA+ L +R
Sbjct: 276 YTSMIGVLCKANR-LDEAVEMFEHLEK-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           QR      + + YN +++   +   +++AL +  +M++D    +   Y+++I  L R  K
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDMLCRAGK 392

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   +L   ++   +  + + +N ++    K+    +A            +P   T+
Sbjct: 393 LDCAF--ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITF 450

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I  L   GR  +A  ++E++ +S  +  +  Y +L+K +   G  +D   +  +M  
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               PD    +  +D    AG  E  R + +E++     P++  YS ++ G    G    
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANE 570

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
           T+++   MK  G   DT  YN++ID F K   ++ A    + M ++G EP  +T+ ++ID
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K  R D A  LFEE + +        Y+ +I+  G+  R ++   +L  +  +GL P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------------QAVNAF 579
           NV T+ +L+D   ++   ++A+ C + + +                        +A   +
Sbjct: 691 NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           + M+  G+KPS ++  ++I+   +    AEA A+    K NG  PD   Y  +++ L   
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 640 DKFHKVFSSY 649
           ++    FS +
Sbjct: 811 NRAMDAFSLF 820



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 207/452 (45%), Gaps = 8/452 (1%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P    +++L ++      +D A+ +   +QK  L +      +I++  L +S+KL EA
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGL-FPNVRTVNIMVDRLCKSQKLDEA 431

Query: 183 FLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             + ++   +  TP  +T+ +LI    +   ++ A  +  KM       + I Y+ +I++
Sbjct: 432 CAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKN 491

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
                + +     K+YK++       D QLLN  +    KAG+  K        +     
Sbjct: 492 FFNHGRKEDG--HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFV 549

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   +Y+ +I  L  +G   E   +F  +KE G    T+AYN ++ G+ K G +  A  +
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + EM+  G  P   TY  +ID  A   R + A ++ +E +    + N  IYS ++ G+  
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G     + +L+E+   G+ P+ + +N ++D   K   ++ A+  F  M      P+ +T
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+   K  ++++A   ++EMQ++G  P T +Y  MI+ L +     +   L    +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           A G +P+   Y  +++      R  DA    E
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/513 (23%), Positives = 217/513 (42%), Gaps = 65/513 (12%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN---------------- 242
           ++ +C + + L +  +++  MR+  +   F  Y+ +I + +  N                
Sbjct: 139 MVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198

Query: 243 -------------------KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
                              ++DS+L   L  E++   ++ D  L N  I  F K G    
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSAL--SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   TY ++I  L  + R  EA  +FE L+++   P T AYN ++ 
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY   G   +A  ++      G +P    Y+ ++      G+ + A  V +EM+   A P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMK-KDAAP 375

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++      G+    F++   M+ +G+ P+    N+M+D   K   L  A A F
Sbjct: 376 NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIF 435

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           ++M  +   PD IT+ +LID   K GR D A +++E+M +      +  Y  +I      
Sbjct: 436 EQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNH 495

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------- 569
            R ED  ++  +M  Q   P++    T +D   ++G  +      E              
Sbjct: 496 GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSY 555

Query: 570 ----------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                     G +++    F  M+  G      A N +I+ F +  +  +A+ +L+ MK 
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            G +P VVTY +++  L ++D+  +   +Y+ F
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDE---AYMLF 645



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 26/357 (7%)

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +  E+  +G  P       ++   VK   L++   VV  M +    P    Y+ LI A
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGA 177

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           ++     +    + ++M+    +P   +++ ++ G+   G       +L EMKSS ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YNV ID+FGK   +  A   F  + + G++PD +T+ ++I    K  R D A E+FE
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            +++    PCT  YN MI   G   ++++   LL   RA+G +P+V+ Y  ++    + G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357

Query: 560 RFDDAIECLEGL-SDQAVN-------------------AFRV---MRTDGLKPSNLALNS 596
           + D+A+   E +  D A N                   AF +   M+  GL P+   +N 
Sbjct: 358 KVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI 417

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
           +++   + Q+  EA A+ + M      PD +T+ +L+  L    RVD  +K++   L
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKML 474



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 183/403 (45%), Gaps = 8/403 (1%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           +D AY +   +   + C +  ++Y+ LI      GR E  ++ +     Q  +P     N
Sbjct: 463 VDDAYKIYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLN 521

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
             +    +  + EK   +  +++   +  D  +YS++I  L +    + +   +L+  ++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY--ELFYSMK 579

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
                LD +  N VI GF K G  +KA + L   +  G  P   TY +VI  L+   R  
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +FEE K   ++     Y++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLL 699

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           DA   A     A +  + M+     PN   Y  ++ G     ++ + F   +EM+  G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P T  Y  MI    K   +  A A FDR  + G  PD+  +N +I+      R   A  L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           FEE + RG      T  ++++ L + +  E    +   +R  G
Sbjct: 820 FEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 149/354 (42%), Gaps = 14/354 (3%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
            +   P+      V+  L +  R IE    +E   E    P  ++YN+LL    +     
Sbjct: 58  ALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCP--ESYNSLLLVMARCRNFD 115

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             + ++ EM  +G  P  +T   ++ +   A +      V++ M     +P    Y+ ++
Sbjct: 116 ALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLI 175

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
             +           + ++M+  G EP  H +  +I  F K   +  A++  D M S  ++
Sbjct: 176 GAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            D + +N  ID   K G+ D A + F E++  G  P   TY  MI +L +  R ++   +
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             ++     +P    Y T++  YG +G+FD+A   LE             R  G  PS +
Sbjct: 296 FEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER-----------QRAKGSIPSVI 344

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A N ++    +  +  EA  V + MK++   P++ TY  L+  L R  K    F
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAF 397


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 210/464 (45%), Gaps = 28/464 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           + N LI+   R   ++ A+++M KM + G   D I ++ +I  L    KI  ++   L+ 
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV--GLFN 190

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNS 313
           E+     E +    N VI G  K G+   A+R F  M Q  G  P   TY  +I +L   
Sbjct: 191 EMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKD 249

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA     E+ + G+ P    YN +L G+  +G L +A  +  EM    V+PD  T+
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+D     G    AR V + M    A+PN++ Y+ ++ GY    +     +VL  M  
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   YN++I+ + K   ++ A      M  + + PDT+T++TL+    + GR   
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF+EM   G  P    Y+I+++   +    ++  +LL  M  + + PN++ YT L+ 
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489

Query: 554 IYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLKP 589
               +G+ + A E                          EGLSD+A   FR M  DG  P
Sbjct: 490 GMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            + + N +I  F ++Q  + A  ++  M       D  T+  L+
Sbjct: 550 DSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 16/390 (4%)

Query: 258 CDKIELDGQL-----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           C++++L G       LN +I    +      A+  +G    +G+ P   T+  +I  L N
Sbjct: 119 CNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCN 178

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G+  EA  +F E+  SG +P   +YN ++ G  K G    A  V  +ME++   P+  T
Sbjct: 179 EGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVT 238

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ +ID+         A   L EM      P+   Y+ IL G+   G+     ++ KEM 
Sbjct: 239 YNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMV 298

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V PDT  +N+++D   K   +  A    + M  +G EP+  T+N L+D +    + D
Sbjct: 299 GRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMD 358

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++   M  +G  P  ++YNI+IN   + +R  + KRLL  M  + L P+ VTY+TL+
Sbjct: 359 EAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               Q GR             +A+N F+ M + GL P  +A + L++ F +     EA  
Sbjct: 419 QGLCQVGR-----------PREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +L+ M E  +KP+++ YT L++ +    K 
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKL 497



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 210/452 (46%), Gaps = 9/452 (1%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           L+  LC   S +D A +V+  + K  +     + ++ LI+ L    K+ EA      ++ 
Sbjct: 137 LINCLCRL-SHVDFAVSVMGKMFKLGI-QPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
                  ++YN +I+   +N +   A+ +  KM Q+    + + Y+ +I SL +   ++ 
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++  +   E+    I  D    N ++ GF   G  ++A R      G  + P T T+  +
Sbjct: 255 AV--EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L   G   EA  V E + E G +P    YNAL+ GY     + +A  V+  M   G 
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  +Y++LI+ Y  + R   A+ +L EM   +  P++  YS ++ G    G  +    
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + KEM SSG+ PD   Y++++D F K+  L  A+     M    I+P+ I +  LI   F
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+ + A+ELF ++   G  P   TYN+MI  L ++   ++       M   G LP+  
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSC 552

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +Y  ++  + Q+     AI+ ++ +  +  +A
Sbjct: 553 SYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSA 584



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 220/481 (45%), Gaps = 30/481 (6%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++    R + + +   + + A+      A++L ++M   G   +  + +++I  L R + 
Sbjct: 87  MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146

Query: 244 ID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +D   S++ K++K      I+ D    N +I G    G   +A+         G  P   
Sbjct: 147 VDFAVSVMGKMFKL----GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVI 202

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  VI  L  +G TI A  VF +++++  KP    YN ++    K   + +A   +SEM
Sbjct: 203 SYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEM 262

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ PD  TY+ ++  + + G+   A  + KEM   +  P++  ++ ++ G    G  
Sbjct: 263 VDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMV 322

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                V + M   G EP+ + YN ++D +  +N +  A+     M+ +G  P+  ++N L
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNIL 382

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+ + K  R + A+ L  EM E+   P T TY+ ++  L +  R  +   L   M + GL
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA----------------------- 578
           LP+++ Y+ L+D + + G  D+A++ L+ + ++ +                         
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502

Query: 579 -FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  +  DG++P     N +I    ++    EA+   + M+++G  PD  +Y  +++  +
Sbjct: 503 LFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFL 562

Query: 638 R 638
           +
Sbjct: 563 Q 563



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 191/402 (47%), Gaps = 11/402 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLS 186
           +++++  LC + ++I +A  V   +++ N      + Y+ +I +L +   + EA  FL  
Sbjct: 204 YNTVINGLCKNGNTI-MAVRVFRKMEQ-NRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSE 261

Query: 187 QRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              R  P   +TYN ++        L +A  L  +M       D + +++++  L +   
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321

Query: 244 IDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +  +   +   E   +K  E +    N ++ G+       +A++ LG+  G G +P  ++
Sbjct: 322 VSEA---RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I     S R  EA+ +  E+ E  L P T  Y+ L++G  ++G  ++A  +  EM 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            SG+LPD   YS+L+D +   G  + A  +LKEM     KPN  +Y+ ++ G    G+ +
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              ++  ++ + G+ PD   YNVMI    K      A   F +M  +G  PD+ ++N +I
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
               +      A +L +EM  + +   ++T+ ++++L    E
Sbjct: 559 QGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHDE 600



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 155/355 (43%), Gaps = 30/355 (8%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    +   L    K      A  + ++M+  GV  + ++ ++LI+        + A  
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           V+ +M     +P++  ++ ++ G  + G+ +    +  EM  SG EP+   YN +I+   
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K      A+  F +M     +P+ +T+NT+ID   K    + A E   EM +RG  P   
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI------ 565
           TYN +++      +  +  RL   M  + ++P+ VT+  LVD   + G   +A       
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332

Query: 566 ------------------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                              CL    D+A+    +M   G  P+  + N LIN + + +R 
Sbjct: 333 TEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRM 392

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            EA  +L  M E  L PD VTY+TLM+ L +V +  +        N++K +  SG
Sbjct: 393 NEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA------LNLFKEMCSSG 441


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 219/458 (47%), Gaps = 17/458 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T++ LI+   +   L++A +L + M + G   D + YS++I  L R  K++      L+
Sbjct: 276 VTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEG--NSLF 333

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                  +++D  + + ++  + + GD  KA+         G+SP   TY+ +I  L  +
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRN 393

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR +EA  VF ++ + GL+P    Y++L+ G+ K   L+D   +   M R G +PD    
Sbjct: 394 GRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVC 453

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+LI+  +  G  + A     +        N+++++ ++ G       +   ++   M  
Sbjct: 454 SMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGM 513

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             V PD   Y V++    +   L  A+A F ++L +G  PD I + TLID    C + D 
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF--CKKRDP 571

Query: 494 AE--ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           A   ++F+ MQ  G FP    YN++IN+   +   E+V  LL  +   GL P++VTY T+
Sbjct: 572 ATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C   +  +A+  F V++    +P+ +    LI+A+ +D R  +A 
Sbjct: 632 ICGY-----------CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +   M E G +P+++TY+ L+    + +     F  Y
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 252/535 (47%), Gaps = 34/535 (6%)

Query: 122 RAVPAP--LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           R+ P+P  +  S L N+      +D A+++ + + +  +     ++YSILI+ L R+ KL
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL-VIYSILINGLFRAGKL 326

Query: 180 YE-----AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            E     +  L++  ++  + +++++ A  R  DL KA+ + ++M ++G   + + YS++
Sbjct: 327 EEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  L R  ++  +    ++ +I    +E      + +I GF K+ +        G+    
Sbjct: 387 INGLCRNGRVLEAC--GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P     + +I  LS  G   EA   F +  + GL      +NAL+ G  ++   +D 
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M    V+PD  TY++L+   A  GR + A  +  ++      P+  IY  ++ G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  + +     Q+ K M+S+G+ PD   YNV+I+ F +  C+ + +     ++  G+EPD
Sbjct: 565 FCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+NT+I  +     + +A +LFE ++     P   T+ I+I+   +  R +D   +  
Sbjct: 625 IVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEG 570
           +M  +G  PN++TY+ L+D Y ++   + A E                        C +G
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG 744

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           L ++A  AF+      L P  +A   LI  + +  R AEA  +  +M  NG+ PD
Sbjct: 745 LMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/572 (21%), Positives = 235/572 (41%), Gaps = 70/572 (12%)

Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSY 162
           L S+P+S  R  F+ AE++  +  P+     ++ C           +   L +H +    
Sbjct: 65  LRSNPTSALRF-FEWAENFLGLCHPV-----QSFC----------GIAHVLLRHRMFDPA 108

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-YNALISACARNDDLEKALNLMSKMRQ 221
             ++  ++   G  E L E     +     P T Y+ L+    RN  +++A++  + M +
Sbjct: 109 TRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSK 168

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G        S ++  L  +++ID  ++ + Y+E+ C  + +   + N     F K G+ 
Sbjct: 169 MGVSISHYAASEMLDLLIDSDRID--VILENYEEM-CKGLGVYEFVFNS----FLKRGEV 221

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K + F       GL PK      ++  L    +   A   F+ +  SG  P    ++ L
Sbjct: 222 EKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTL 281

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y K   L +A  + + M   G++PD   YS+LI+    AG+ E    +         
Sbjct: 282 INVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGV 341

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           K +  I+S I+  Y   G+  +  +V   M   G+ P+   Y+++I+   +   +  A  
Sbjct: 342 KMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACG 401

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F ++L +G+EP  +T+++LID   K         L+  M  +G+ P     +++IN L 
Sbjct: 402 VFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLS 461

Query: 522 EQERWEDVKRLLGNMRAQGL-----------------------------------LPNVV 546
            Q   ++  R       +GL                                   +P+VV
Sbjct: 462 RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVV 521

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TYT LV    + GR D+A+             F++++  G  P ++   +LI+ F + + 
Sbjct: 522 TYTVLVKGLAEQGRLDEALALF----------FQLLKK-GFSPDHIIYCTLIDGFCKKRD 570

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A    + + M+ NG+ PD+  Y  L+    R
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 155/369 (42%), Gaps = 8/369 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLY 180
           VP  +  S+L N  S    +D A        K  L  +   L++ LI     L R+    
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN-NYLFNALIDGCFRLKRTRDGL 505

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           + ++L    ++ P  +TY  L+   A    L++AL L  ++ + G+  D I Y  +I   
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K D +   +++K ++ + I  D  + N +I  F + G     +  L      GL P
Sbjct: 566 CK--KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I    +     +A  +FE LK    +P    +  L+  Y K G + DA  + 
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           S M   G  P+  TYS LID Y      ESA  + ++M      PN   YS ++ G   +
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  +      +      + PD   Y ++I  + K   L  AM  +D ML  GI PD +  
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQ 803

Query: 479 NTLIDCHFK 487
             L +  F+
Sbjct: 804 KALAEYGFQ 812


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 215/466 (46%), Gaps = 31/466 (6%)

Query: 196 YNALISACARNDDLEKALNLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           YN ++ +  R  D  +AL +   +M +DG     + Y+ +I  L ++N + + +  +L++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGM--ELFE 61

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+       D    N +I    KAGD  +A R  G     G  P   TY+ +I  L   G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 315 RTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL---PD 369
           R  EA  + +E+  K   + P    YN+ L G  K     +A  ++  + R G L   PD
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPD 180

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T+S LID     G+ + A  V  +M      PN   Y+ ++ G     + +R   +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-----IEPDTITWNTLIDC 484
            M   GV PD   Y+V++D F K + +  A+     M S G     + PD +T+N LI  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQERWEDVKRLLGNMRAQGL 541
             K G +++A  LFEEM  +   P   T+  +I+ L   G+ E   D+  L+GN+   G+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL---GV 357

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNVVTY  LV    +SGR ++A + LE            M + G  P ++   SL+ A 
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEE-----------MVSSGCVPDSITYGSLVYAL 406

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
               R  +A  ++  +K  G  PD VTY  L+  L +  K  +  +
Sbjct: 407 CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 452



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 216/484 (44%), Gaps = 64/484 (13%)

Query: 166 YSILIHALGRSEKL---YEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+ L +S  L    E F  L+ +      +TYN LI +  +  DLE+A  L   M 
Sbjct: 40  YNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 99

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK- 277
             G   + + YS++I  L +  +ID +  L+Q++ ++  CD +  +    N  + G  K 
Sbjct: 100 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK-SCDVLP-NIITYNSFLDGLCKQ 157

Query: 278 --AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
               +A + MR L     + +SP T T++ +I  L   G+  EA +VF+++   G  P  
Sbjct: 158 SMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 216

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YNAL+ G  K   ++ A  ++  M   GV PD  TYS+L+DA+  A R + A  +L  
Sbjct: 217 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 276

Query: 396 MEVSHAKPNSFI-----YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           M      PN  +     ++ ++AG    G +++   + +EM +  ++PD   +  +ID  
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 451 GK-------------------------YNCLHHAMAAFDR----------MLSEGIEPDT 475
            K                         YN L H +    R          M+S G  PD+
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           IT+ +L+    +  R D A +L  E++  G+ P T TYNI+++ L +  + E    +L  
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M  +G  P+  T+        +SG     +E L           RV+   G+ P     +
Sbjct: 457 MVGKGHQPDSFTFAACFSGLHRSGNLAGTMELL-----------RVVLAKGMLPDATTCS 505

Query: 596 SLIN 599
           S+++
Sbjct: 506 SILD 509



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 189/419 (45%), Gaps = 16/419 (3%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTP--LTYNALISACARNDDLEK 211
           C    + YS+LI+ L +  ++ EA  L Q        + P  +TYN+ +    +     +
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 162

Query: 212 ALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           A  LM  +R        D + +S +I  L +  +ID +    ++ ++       +    N
Sbjct: 163 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC--SVFDDMIAGGYVPNVITYN 220

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++ G  KA    +A   +      G++P   TY+ ++ A   + R  EA  +   +   
Sbjct: 221 ALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 280

Query: 330 G-----LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G     L P    +N L+ G  K G  + A  +  EM    + PD  T+  LID    AG
Sbjct: 281 GCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 340

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           + E+AR +L  M      PN   Y+ ++ G    G  +   Q L+EM SSG  PD+  Y 
Sbjct: 341 QVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYG 400

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            ++    + +    A+     + S G +PDT+T+N L+D  +K G+ ++A  + EEM  +
Sbjct: 401 SLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           G+ P + T+    + L           LL  + A+G+LP+  T ++++D   +SG+ DD
Sbjct: 461 GHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 183/411 (44%), Gaps = 39/411 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF---- 183
           ++S L  LC  + + + A  ++  L+  +L  S + + +S LI  L +  ++ EA     
Sbjct: 147 YNSFLDGLCKQSMTAE-ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +++       +TYNAL++   + D +E+A  ++  M   G   D I YS+++ +  + +
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++D +L                 +LL+    G A  G                L P   T
Sbjct: 266 RVDEAL-----------------ELLH----GMASRGCTPNV-----------LVPDKVT 293

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I     +G   +A A+FEE+    L+P    + AL+ G  K G ++ A  ++  M 
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV P+  TY+ L+     +GR E A   L+EM  S   P+S  Y  ++          
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              Q++ E+KS G +PDT  YN+++D   K      A+   + M+ +G +PD+ T+    
Sbjct: 414 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 473

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
               + G      EL   +  +G  P  TT + +++ +    + +DVK ++
Sbjct: 474 SGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMI 524



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 12/210 (5%)

Query: 443 YNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
           YN+++ +  +      A+  F   M  +G+ P  +T+NT+I+   K        ELFEE+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ERG+ P   TYN +I+ L +    E+ +RL G+M ++G +PNVVTY+ L++   + GR 
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D+A E ++ ++ ++ +           P+ +  NS ++   +    AEA  +++ +++  
Sbjct: 124 DEARELIQEMTRKSCDVL---------PNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 174

Query: 622 LK--PDVVTYTTLMKALIRVDKFHKVFSSY 649
           L+  PD VT++TL+  L +  +  +  S +
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVF 204



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 140/322 (43%), Gaps = 30/322 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           +++L+  LC ++  ++ A+A++  +    +     + YS+L+ A  ++ ++ EA  L   
Sbjct: 219 YNALVNGLCKADK-MERAHAMIESMVDKGVTPDV-ITYSVLVDAFCKASRVDEALELLHG 276

Query: 188 --RQRLTP-------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              +  TP       +T+N LI+   +  + E+A  L  +M       D + +  +I  L
Sbjct: 277 MASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 336

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQL--------LNDVIVGFAKAGDASKAMRFLGM 290
            +  +++++           D ++L G L         N ++ G  K+G   +A +FL  
Sbjct: 337 CKAGQVEAAR----------DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G  P + TY +++ AL  + RT +A  +  ELK  G  P T  YN L+ G  K G 
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            + A  V+ EM   G  PD  T++        +G       +L+ +      P++   S 
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506

Query: 411 ILAGYRDRGEWQRTFQVLKEMK 432
           IL      G+      ++KE +
Sbjct: 507 ILDWVCRSGKLDDVKAMIKEFE 528


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 161/666 (24%), Positives = 271/666 (40%), Gaps = 104/666 (15%)

Query: 44  ATASGESSFSSSSFT----------SKQNDTEEEEEDDD-----DVLSLQKQRYDFTPLL 88
            +A G +  SSS  T          +KQ   +   E  D     D L  +  R     L 
Sbjct: 7   GSALGRAGASSSKRTKQGGRGGAKRTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFDLN 66

Query: 89  NFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYA 148
             LS+ + +  A A+    S  NR+    A S  A P    + ++   C     +DLA+A
Sbjct: 67  RALSDVARASPAVAI----SLFNRMPRAGATS--AAPNIATYGIVIGCCRRLGRLDLAFA 120

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDD 208
            V  +    L                             R    PL  ++    C     
Sbjct: 121 TVGRVITTGL-----------------------------RHEPNPLQSSSQGPLCTAGGR 151

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD---KIELDG 265
             +   ++ +M + G   D  +Y+++++ L   +K     L  L+  I  D   +  LD 
Sbjct: 152 AMRMDIVLRRMPELGCKPDLFSYTILLKGLC-DDKTSQQALDLLH--IMADHKGRCPLDV 208

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
                VI G  + G   KA          G SP   TY+++I+ALS +    +A  VF  
Sbjct: 209 VAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTR 268

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + ++G+ P    Y +L+ GY   G  K+A  +  +M R GV PD  TY+ L+D     G+
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              AR +   +     KP+S  Y  +L GY   G       +L  M   G++   H +N+
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++  + K+N +  A+  F  M  +G+ PD + + T++D     GR D A   F  ++  G
Sbjct: 389 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 448

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRL-------------------LGNMRAQGLL---- 542
             P    +  +I+ L   ++W+ V+ L                   +GN+  +G +    
Sbjct: 449 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 508

Query: 543 ------------PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
                       PN  TY TL+D Y           CL+G  D+A+    VM  +G+KPS
Sbjct: 509 NLFDLMVRIGIEPNTNTYNTLIDGY-----------CLDGKMDEAMKLLGVMVFNGVKPS 557

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           ++  N++IN + ++ R  +   +L+ M   G+ P +VTY  L++ L +  +   V +  L
Sbjct: 558 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR--TVAAKEL 615

Query: 651 FFNIYK 656
           +  + K
Sbjct: 616 YLRMIK 621


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 214/448 (47%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N LI+       +  + ++++ + + GYH D I  + +I+ L    ++  +L  K +
Sbjct: 105 VTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKAL--KFH 162

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++   + +LD      +I G  K G+   A++ +   +   + P    Y  +I +L  +
Sbjct: 163 DDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKN 222

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  ++ E+    + P    Y  L+ G+  MG L +A  +++EM+   + PD +T+
Sbjct: 223 KLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTF 282

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+LIDA    G+ ++A+IVL  M  ++ KP+   Y+ ++ GY    E +    V   M  
Sbjct: 283 SILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQ 342

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SGV P    Y +MID   K   +  A++ F+ M  + + P+TIT+N+LID   K GR   
Sbjct: 343 SGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAY 402

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +L ++M++R       TY+ +I+ L +    +    L   M  Q + P++ TYT L+D
Sbjct: 403 VWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILID 462

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR   A E            F+ +   G          +I+ F +     EA A+
Sbjct: 463 GLCKGGRLKIAQE-----------VFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           L  M++NG  P+ +T+  ++ AL   D+
Sbjct: 512 LSKMEDNGCIPNAITFDIIICALFEKDE 539



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 177/388 (45%), Gaps = 37/388 (9%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           +L  ++Y  LI+   +  + + A+ LM  + +     D + Y+++I SL +   +  +  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEAC- 229

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             LY E+   +I  +      +I GF   G   +A+  L   +   ++P   T++ +I A
Sbjct: 230 -NLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+   A+ V   + ++ +KP    YN+L+ GY  +  +K A++V + M +SGV P 
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG--------------- 414
             +Y+++ID        + A  + +EM+  +  PN+  ++ ++ G               
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 415 -YRDRGEW-------------------QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
             RDR +                     +   + K+M +  ++PD + Y ++ID   K  
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A   F  +L +G   D  T+  +I    K G +D A  L  +M++ G  P   T++
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFD 528

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLL 542
           I+I  L E++  +  ++LL  M A+GLL
Sbjct: 529 IIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 166/365 (45%), Gaps = 24/365 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++++L    R   A ++ + L   G+       N L+  +  +G +  +  V
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++ + + G  PD  T + LI      G  + A     ++     + +   Y  ++ G   
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            GE +   Q+++ ++   ++PD   YN++ID+  K   +  A   +  M ++ I P+ +T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + TLI      G    A  L  EM+ +   P   T++I+I+ LG++ + +  K +L  M 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 538 AQGLLPNVVTYTTLVDIY----------------GQSG------RFDDAIE--CLEGLSD 573
              + P+VVTY +LVD Y                 QSG       +   I+  C   + D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A++ F  M+   + P+ +  NSLI+   +  R A  + ++  M++     DV+TY++L+
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 634 KALIR 638
            AL +
Sbjct: 427 DALCK 431



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 46/297 (15%)

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           Y N      A  +   M +    P +F ++ IL+       +     + K +   G+  D
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT---------------------- 477
               N++I+ F     +  + +    +L  G  PD IT                      
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 478 -------------WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                        + TLI+   K G    A +L   ++ER   P    YNI+I+ L + +
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
              +   L   M A+ + PNVVTYTTL  IYG          C+ G   +AV     M+ 
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTL--IYG---------FCIMGCLIEAVALLNEMKL 272

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             + P     + LI+A G++ +   A  VL  M +  +KPDVVTY +L+     V++
Sbjct: 273 KNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE 329


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 209/448 (46%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI+  ++      + ++ + + + GY  + I  + +I+ L    +I  +L    +
Sbjct: 92  VTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL--HFH 149

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++      L+      +I G  K G  S A++ L    G  + P    Y  +I ++   
Sbjct: 150 DKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKV 209

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  ++ E+   G+ P    Y+AL+ G+  +G L DA  + ++M    + PD +T+
Sbjct: 210 KLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+L+D +   GR + A+ VL  M     KP+   Y  ++ GY    +  +   +   M  
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV  +   YN+MI+ F K   +  AM  F  M  + I PD +T+N+LID   K G+   
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L +EM +RG      TYN +++ L +  + +    LL  M+ +G+ P++ TYT L+D
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR  D           A N F  +   G   +      +I  F ++    +A A+
Sbjct: 450 GLCKGGRLKD-----------AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALAL 498

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           L  M++NG  P+  TY  ++ +L   D+
Sbjct: 499 LSKMEDNGCIPNAKTYEIIILSLFEKDE 526



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 193/408 (47%), Gaps = 13/408 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           +  ++ SL + N   +++   L++E+E + I  D    N +I  F++ G    +      
Sbjct: 59  FGKILGSLVKINCYQTAI--SLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFAN 116

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G  P   T   +I  L   G+  +A    +++   G       Y  L+ G  K+G 
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
              A  ++  ++   V P+   Y+ +ID+         A  +  EM      P+   YS 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++G+   G+      +  +M S  + PD + +++++D F K   +  A      M+ +G
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I+PD +T+ +L+D +    + ++A+ +F  M + G      +YNIMIN   + ++ ++  
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   M  + ++P+VVTY +L+D   +SG+   A++ ++ + D+           G+   
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR-----------GVPHD 405

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  NS+++A  ++ +  +A A+L  MK+ G++PD+ TYT L+  L +
Sbjct: 406 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 182/385 (47%), Gaps = 7/385 (1%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++ Y  LI+ L +  +   A  L +R   + + P  + YN +I +  +   + +A +L S
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + YS +I       K++ ++   L+ ++  ++I  D    + ++ GF K
Sbjct: 221 EMVSKGISPDVVTYSALISGFCILGKLNDAI--GLFNKMISEEINPDVYTFSILVDGFCK 278

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A   L M    G+ P   TY +++       +  +A+++F  + + G+    ++
Sbjct: 279 EGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQS 338

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G+ K+  + +A  +  EM    ++PD  TY+ LID    +G+   A  ++ EM 
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 +   Y+ IL       +  +   +L +MK  G++PD + Y ++ID   K   L 
Sbjct: 399 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ +L +G      T+  +I        +D+A  L  +M++ G  P   TY I+I
Sbjct: 459 DAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLL 542
             L E++  +  ++LL  M A+GLL
Sbjct: 519 LSLFEKDENDMAEKLLREMIARGLL 543



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 158/350 (45%), Gaps = 14/350 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++    T+  +I   S  G T  + +VF  + + G +P       L+KG    G +  A
Sbjct: 86  GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                ++   G   ++  Y  LI+     G+  +A  +L+ ++    +PN  +Y+ I+  
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     F +  EM S G+ PD   Y+ +I  F     L+ A+  F++M+SE I PD
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T++ L+D   K GR   A+ +   M ++G  P   TY  +++     ++    K +  
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFN 325

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G+  NV +Y  +++ + +  + D           +A+N F+ M    + P  +  
Sbjct: 326 TMAQGGVTANVQSYNIMINGFCKIKKVD-----------EAMNLFKEMHCKNIIPDVVTY 374

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDK 641
           NSLI+   +  + + A  ++  M + G+  D +TY +++ AL +   VDK
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 424



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 139/309 (44%), Gaps = 11/309 (3%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +  +L   VK+   + A  +  EME +G+  D  T+++LI+ ++  G    +  V
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
              +     +PN+   + ++ G   +G+  +      ++ + G   +   Y  +I+   K
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A+    R+  + ++P+ + +NT+ID   K    + A +L+ EM  +G  P   T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +I+      +  D   L   M ++ + P+V T++ LVD +           C EG  
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF-----------CKEGRV 282

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A N   +M   G+KP  +   SL++ +   ++  +A ++   M + G+  +V +Y  +
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342

Query: 633 MKALIRVDK 641
           +    ++ K
Sbjct: 343 INGFCKIKK 351



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 24/271 (8%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P  F + +IL        +Q    + +EM+ +G+  D   +N++I+ F +    H + + 
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  +L +G EP+ IT  TLI      G+  +A    +++   G+      Y  +IN L +
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------- 566
             +     +LL  +  + + PNVV Y T++D   +    ++A +                
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 567 --------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C+ G  + A+  F  M ++ + P     + L++ F ++ R  EA  VL  M 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + G+KPDVVTY +LM     V + +K  S +
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 33/229 (14%)

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H  +++F+R+L+    P    +  ++    K   Y  A  L  EM+  G      T+NI+
Sbjct: 38  HSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNIL 97

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           IN   +         +  N+  +G  PN +T TTL+      G+   A+           
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 567 --------------CLEGLSDQAVNAFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEA 610
                         C  G +  A+   R  R DG  ++P+ +  N++I++  + +   EA
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLR--RVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 215

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLS 659
           F +   M   G+ PDVVTY+ L+     + K +        FN  KM+S
Sbjct: 216 FDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIG---LFN--KMIS 259


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 226/482 (46%), Gaps = 27/482 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           E   +I +  L R+ +L E     +R   Q   P  +   +LI    R+   +KA  +M 
Sbjct: 106 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +   G   D I Y+++I    ++ +ID +L     + +E   +  D    N ++     
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKAL-----EVLERMSVAPDVVTYNTILRSLCD 220

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +G   +AM  L         P   TY  +I A  N     +A  + +E+++ G KP    
Sbjct: 221 SGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 280

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G  K G L +A   ++ M   G  P+  T+++++ +  + GRW  A  +L +M 
Sbjct: 281 YNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+   ++ ++     +    R   VL++M   G  P++  YN ++  F +   + 
Sbjct: 341 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMD 400

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+   + M+S G  PD +T+NTL+    K G+ D A E+  ++  +G  P   TYN +I
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI 460

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLSDQ 574
           + L +  + E    LL  MR +GL P+++TY+TL+   G+ G+ D+AI+    +EGLS  
Sbjct: 461 DGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS-- 518

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                       +KPS +  N+++    + Q+ + A   L YM E G KP   TYT L++
Sbjct: 519 ------------IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566

Query: 635 AL 636
            +
Sbjct: 567 GI 568



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 207/450 (46%), Gaps = 18/450 (4%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            RN +LE+ L  + +M   G   D I  + +I+   R+ K   +   ++ + +E      
Sbjct: 117 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKA--TRIMEILENSGAVP 174

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ K+G+  KA+  L   + + ++P   TY  ++ +L +SG+  EA  V 
Sbjct: 175 DVITYNVLIGGYCKSGEIDKALEVL---ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +   +    P    Y  L++       +  A  ++ EM + G  PD  TY++LI+     
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L  M     KPN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G  P+++++N L+    +  + DRA E  E M  
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN ++  L +  + +    +L  + ++G  P ++TY T++D   + G+ + 
Sbjct: 412 RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 471

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E LE            MR  GLKP  +  ++L+   G + +  EA  +   M+   +K
Sbjct: 472 AVELLEE-----------MRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK 520

Query: 624 PDVVTYTTLMKALIRVDKFHKV--FSSYLF 651
           P  VTY  +M  L +  +  +   F +Y+ 
Sbjct: 521 PSAVTYNAIMLGLCKAQQTSRAIDFLAYMV 550



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 14/333 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G   E     E +   G  P   A  +L++G+ + G  K A  ++  +E SG +PD
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY++LI  Y  +G  + A  VL+ M V+   P+   Y+ IL    D G+ +   +VL 
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                   PD   Y ++I+     + +  AM   D M  +G +PD +T+N LI+   K G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A +    M   G  P   T+NI++  +    RW D +RLL +M  +G  P+VVT+ 
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++             C + L  +A++    M   G  P++L+ N L++ F ++++   
Sbjct: 353 ILINFL-----------CRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A   L+ M   G  PD+VTY TL+ AL +  K 
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 434



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 187/411 (45%), Gaps = 17/411 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            ++ E+  AVP  + +++L      +  ID A  V   L++ ++     + Y+ ++ +L 
Sbjct: 164 MEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDV-VTYNTILRSLC 219

Query: 175 RSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            S KL EA  +  RQ      P  +TY  LI A   +  + +A+ L+ +MR+ G   D +
Sbjct: 220 DSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 279

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I  + +  ++D ++  K    +     + +    N ++      G    A R L 
Sbjct: 280 TYNVLINGICKEGRLDEAI--KFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337

Query: 290 MAQGVGLSPKTATYAAVITALSNS---GRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                G SP   T+  +I  L      GR I+   V E++ + G  P + +YN LL G+ 
Sbjct: 338 DMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCVPNSLSYNPLLHGFC 394

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           +   +  A   +  M   G  PD  TY+ L+ A    G+ ++A  +L ++      P   
Sbjct: 395 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI 454

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G+ +   ++L+EM+  G++PD   Y+ ++   G+   +  A+  F  M
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               I+P  +T+N ++    K  +  RA +    M E+G  P   TY I+I
Sbjct: 515 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 229/478 (47%), Gaps = 27/478 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN  I    +   ++ A     +M+ +G   D + Y+ ++  L + N++D ++  +++++
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAV--EIFEQ 191

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E ++        N +I+G+  AG   +A   L   +  G  P    Y  ++T L   G+
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
           T +A  +FEE+K   + P    YN ++    K G ++ A  V   M+ +G+ P+  T ++
Sbjct: 252 TDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +ID    A + + A  + + M+     P+   +  ++ G   +G     +++ + M  + 
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD 370

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P+   Y  +I  F K +        +  M+  G  PD +  NT +DC FK G  ++  
Sbjct: 371 QIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGR 430

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            LFEE++ RG+ P T +Y+I+I+ L +     +   L   M+ QG + +   Y T++D +
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGF 490

Query: 556 GQSGRFDDAIECLE-------------------GLS-----DQAVNAFRVMRTDGLKPSN 591
            +SG+ + A + LE                   GL+     D+A   F   +++G++ + 
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  +SLI+ FG+  R  EA+ V++ M + GL P+V T+  L+  L++ ++ ++    +
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCF 608



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 243/517 (47%), Gaps = 25/517 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWL-QKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           + S++  LC +N  +D A  +   + Q   +  +Y   Y+ +I   G + K  EA+ L +
Sbjct: 169 YTSMMGVLCKANR-LDEAVEIFEQMEQNRQVPCAYA--YNTMIMGYGSAGKFDEAYSLLE 225

Query: 188 RQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           RQR      + + YN +++   +    +KAL +  +M++D    +   Y+++I  L +  
Sbjct: 226 RQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAG 284

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTA 301
            ++++   K+   ++   +  + + +N +I    KA    +A   F GM   V  SP  A
Sbjct: 285 NVEAAF--KVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV-CSPDGA 341

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+ ++I  L   GR  +A  ++E + ++   P    Y +L++ + K    +D   +  EM
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            RSG  PD    +  +D    AG  E  R + +E++     P++  YS ++      G  
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           + T+++   MK  G   DT  YN +ID F K   ++ A    + M + G  P  +T+ ++
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D   K  R D A  LFEE +  G       Y+ +I+  G+  R ++   ++  M  +GL
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNV T+  L+D   ++   ++A+ C + + D               P+ +    LIN  
Sbjct: 582 TPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCT-----------PNQITYCILINGL 630

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + ++  +AF   Q M++ GLKP+ +TYT ++  L +
Sbjct: 631 CKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAK 667



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 229/513 (44%), Gaps = 35/513 (6%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMRQDG 223
           L+ +  +S KL EAF L Q  R     P    Y  LI A +   + ++ L L ++M++ G
Sbjct: 32  LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y  +    + +I+  +R  ++D++L   L  E++ +  + D  L N  I  F K G    
Sbjct: 92  YEVNVHLLTTLIRVFSREGRVDAAL--SLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDM 149

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   TY +++  L  + R  EA  +FE+++++   P   AYN ++ 
Sbjct: 150 AWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIM 209

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY   G   +A  ++      G +P    Y+ ++      G+ + A  + +EM+   A P
Sbjct: 210 GYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMP 268

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ I+      G  +  F+V   MK +G+ P+    N+MID   K   L  A + F
Sbjct: 269 NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF 328

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  +   PD  T+ +LID   K GR D A  ++E M +    P    Y  +I    + 
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------- 569
           +R ED  ++   M   G  P+++   T +D   ++G  +      E              
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448

Query: 570 ----------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                     G + +    +  M+  G      A N++I+ F +  +  +A+ +L+ MK 
Sbjct: 449 SILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 508

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            G  P VVTY +++  L ++D+  +   +Y+ F
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDE---AYMLF 538



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 213/448 (47%), Gaps = 9/448 (2%)

Query: 127 PLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---F 183
           P ++ ++  LC +  +++ A+ V   +++  L  +   + +I+I  L +++KL EA   F
Sbjct: 271 PTYNIIIGMLCKA-GNVEAAFKVRDAMKEAGLFPNVRTI-NIMIDRLCKAQKLDEACSIF 328

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
                +  +P   T+ +LI    +   ++ A  +  +M       + + Y+ +I++  + 
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           ++ +     K+YKE+       D  LLN  +    KAG+  K        +  G  P T 
Sbjct: 389 DRKEDG--HKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y+ +I +L  +G   E   ++  +K+ G    T+AYN ++ G+ K G +  A  ++ EM
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  G  P   TY  ++D  A   R + A ++ +E + +  + N  IYS ++ G+   G  
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              + V++EM   G+ P+ + +N ++D   K   ++ A+  F  M      P+ IT+  L
Sbjct: 567 DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCIL 626

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+   K  ++++A   ++EMQ++G  P T TY  MI+ L +         L    RA G 
Sbjct: 627 INGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGG 686

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           +P+  +Y  +++    + R  DA +  E
Sbjct: 687 IPDSASYNAMIEGLSIANRALDAYQLFE 714



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 15/384 (3%)

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           +++    K+    +A   L M +     P  + Y  +I ALS  G +    A+F +++E 
Sbjct: 31  ELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQEL 90

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +        L++ + + G +  A  ++ EM+ +    D   Y++ ID +   G+ + A
Sbjct: 91  GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMA 150

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                EM+ +   P+   Y+ ++             ++ ++M+ +   P  + YN MI  
Sbjct: 151 WKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMG 210

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +G       A +  +R  ++G  P  + +N ++ C  K G+ D+A  +FEEM+ R   P 
Sbjct: 211 YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK-RDAMPN 269

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI+I +L +    E   ++   M+  GL PNV T   ++D   ++ + D+A    E
Sbjct: 270 LPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFE 329

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G+       ++V   DG         SLI+  G+  R  +A+ + + M +    P+VV Y
Sbjct: 330 GMD------YKVCSPDG-----ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVY 378

Query: 630 TTLMKALIRVDK---FHKVFSSYL 650
           T+L++   + D+    HK++   +
Sbjct: 379 TSLIRNFFKCDRKEDGHKMYKEMM 402



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 4/355 (1%)

Query: 175 RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           R E  ++ +    R   +P  +  N  +    +  + EK   L  +++  G+  D  +YS
Sbjct: 390 RKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYS 449

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           ++I SL +      +   +LY  ++     LD +  N VI GF K+G  +KA + L   +
Sbjct: 450 ILIHSLVKAGFARETY--ELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK 507

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
            +G  P   TY +V+  L+   R  EA  +FEE K +G++     Y++L+ G+ K+G + 
Sbjct: 508 TMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVD 567

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A  V+ EM + G+ P+ +T++ L+D    A     A +  + M+     PN   Y  ++
Sbjct: 568 EAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILI 627

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G     ++ + F   +EM+  G++P+T  Y  MI    K   +  A + F+R  + G  
Sbjct: 628 NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGI 687

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           PD+ ++N +I+      R   A +LFEE + +G    T T   +++ L + E  E
Sbjct: 688 PDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLE 742



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 26/357 (7%)

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           E +  E+  +G  P       L+   VK   L +A  ++  M      P    Y+ LI A
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            +  G  +    +  +M+    + N  + + ++  +   G       +L EMKS+  + D
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YNV ID FGK   +  A   F  M + G+ PD +T+ +++    K  R D A E+FE
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           +M++    PC   YN MI   G   ++++   LL   RA+G +P+VV Y  ++   G+ G
Sbjct: 191 QMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKG 250

Query: 560 RFDDAIECLE-----------------GLSDQAVN---AFRV---MRTDGLKPSNLALNS 596
           + D A+   E                 G+  +A N   AF+V   M+  GL P+   +N 
Sbjct: 251 KTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
           +I+   + Q+  EA ++ + M      PD  T+ +L+  L    RVD  ++++   L
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERML 367



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 11/270 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++   C S   ++ AY ++  ++     +   + Y  ++  L + ++L EA++L + 
Sbjct: 483 YNTVIDGFCKS-GKVNKAYQLLEEMKTMGH-HPTVVTYGSVVDGLAKIDRLDEAYMLFEE 540

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +     L  + Y++LI    +   +++A  +M +M Q G   +   ++ ++  L +  +
Sbjct: 541 AKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEE 600

Query: 244 IDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           I+ +L+  +  K+++C   ++   +L   I G  K    +KA  F    Q  GL P T T
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCIL---INGLCKVRKFNKAFVFWQEMQKQGLKPNTIT 657

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I+ L+ SG   +A ++FE  + SG  P + +YNA+++G        DA  +  E  
Sbjct: 658 YTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETR 717

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIV 392
             G      T   L+DA   A   E A IV
Sbjct: 718 LKGCSIHTKTCVALLDALHKAECLEQAAIV 747


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 50/496 (10%)

Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L PL  TY+ LI    +   LE A +L+ +M   G   D   YSL+I  L +    D++ 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA- 331

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA------- 301
            + L  E+    I +   + +  I   +K G   KA          GL P+         
Sbjct: 332 -KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 302 ----------------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                                       TY  V+  + +SG    A  + +E+  SG +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  L+K +++     DA  V+ EM+  G+ PD   Y+ LI   + A R + AR  L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM  +  KPN+F Y   ++GY +  E+    + +KEM+  GV P+      +I+ + K 
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A +A+  M+ +GI  D  T+  L++  FK  + D AEE+F EM+ +G  P   +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            ++IN   +    +    +   M  +GL PNV+ Y  L+  + +SG  + A E L+ +S 
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS- 689

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                       GL P+ +   ++I+ + +    AEAF +   MK  GL PD   YTTL+
Sbjct: 690 ----------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 634 KALIRVDKFHKVFSSY 649
               R++   +  + +
Sbjct: 740 DGCCRLNDVERAITIF 755



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 231/517 (44%), Gaps = 58/517 (11%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R + + + +  L+  ++R   ++P TY  ++     + DL+ A N++ +M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I++  + ++   ++  ++ KE++   I  D    N +I+G +KA  
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAM--RVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
             +A  FL      GL P   TY A I                               T 
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 310 LSN----SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           L N     G+ IEA + +  + + G+    K Y  L+ G  K   + DAE +  EM   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  +Y +LI+ ++  G  + A  +  EM      PN  IY+ +L G+   GE ++  
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L EM   G+ P+   Y  +ID + K   L  A   FD M  +G+ PD+  + TL+D  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE-RWEDVKRLLGNMRAQGL 541
            +    +RA  +F    ++G    T  +N +IN +   G+ E + E + RL+     +  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VTY  ++D             C EG  + A   F  M+   L P+ +   SL+N +
Sbjct: 802 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  R AE F V       G++PD + Y+ ++ A ++
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 238/551 (43%), Gaps = 59/551 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + +++K +CSS   +D AY +V  +     C    ++Y+ LI    ++ +  +A  +   
Sbjct: 420 YGTVVKGMCSS-GDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q + P    YN+LI   ++   +++A + + +M ++G   +   Y   I      ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             S+   K  KE+ EC  +  +  L   +I  + K G   +A          G+     T
Sbjct: 538 FASA--DKYVKEMRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  + +  +AE +F E++  G+ P   +Y  L+ G+ K+G ++ A  +  EM 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+   Y++L+  +  +G  E A+ +L EM V    PN+  Y  I+ GY   G+  
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF------------------- 463
             F++  EMK  G+ PD+  Y  ++D   + N +  A+  F                   
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 464 ---------------DRMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
                          +R++    +    P+ +T+N +ID   K G  + A+ELF +MQ  
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  ++N   +  R  ++  +     A G+ P+ + Y+ +++ + + G    A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 565 IECLEGLSDQ--AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +     L DQ  A NA      DG K S     +L++ F +      A  V++ M     
Sbjct: 895 LV----LVDQMFAKNAV----DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946

Query: 623 KPDVVTYTTLM 633
            PD  T   L+
Sbjct: 947 IPDSATVIELI 957



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P   TY  +I  L    R  +A+++  E+   G+      Y+ L+ G +K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +V EM   G+    + Y   I   +  G  E A+ +   M  S   P +  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y      ++ +++L EMK   +    + Y  ++        L  A      M++ G  P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + + TLI    +  R+  A  + +EM+E+G  P    YN +I  L + +R ++ +  L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL PN  TY   +  Y ++  F  A        D+ V   + MR  G+ P+ +  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASA--------DKYV---KEMRECGVLPNKVLC 560

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             LIN + +  +  EA +  + M + G+  D  TYT LM  L + DK
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 47/368 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  L++   +ND ++ A  +  +MR  G   D  +Y ++I   ++   +  +    ++ 
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA--SSIFD 651

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+  + +  +  + N ++ GF ++G+  KA   L      GL P   TY  +I     SG
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-------------------- 354
              EA  +F+E+K  GL P +  Y  L+ G  ++  ++ A                    
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771

Query: 355 ------EFVVSEMERSGVL-------------PDEHTYSLLIDAYANAGRWESARIVLKE 395
                 +F  +E+ ++ VL             P++ TY+++ID     G  E+A+ +  +
Sbjct: 772 LINWVFKFGKTEL-KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M+ ++  P    Y+ +L GY   G     F V  E  ++G+EPD   Y+V+I+ F K   
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 456 LHHAMAAFDRMLS-----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
              A+   D+M +     +G +    T   L+    K G  + AE++ E M    Y P +
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 511 TTYNIMIN 518
            T   +IN
Sbjct: 951 ATVIELIN 958



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 138/369 (37%), Gaps = 42/369 (11%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VG S     +  +       G   EA  VF       L PR      LL   ++   L  
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL--KEMEVSHAKPNSFIYSRI 411
              V   M    V+ D  TY +LI A+  AG  +  + VL   E E   A  N       
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV------ 258

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
                         ++ + M   G+ P  + Y+V+ID   K   L  A +    M S G+
Sbjct: 259 ----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             D  T++ LID   K    D A+ L  EM   G       Y+  I ++ ++   E  K 
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
           L   M A GL+P    Y +L++ Y +        E                        C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G  D A N  + M   G +P+ +   +LI  F ++ R  +A  VL+ MKE G+ PD+ 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 628 TYTTLMKAL 636
            Y +L+  L
Sbjct: 489 CYNSLIIGL 497


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 43/484 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
            TYN L+    R    +KA  +  +M       D   ++++++ L R+N+++ +  LL +
Sbjct: 8   FTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGR 67

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + KE+ C     D  + N +I G++KA D  +A +FL         P   TY  ++  L 
Sbjct: 68  M-KEMGCVP---DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + RT +A  + +E+++ G  P    YN +++G  +   L +A+ ++ EM   G  PD  
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+  I       R + AR  L  M V+   P+   Y+ ++ G    G+     ++L  M
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHM 240

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            + G  PD   Y+ +ID F K   +  AM   D ML  G  P+ + +N+L+    + G  
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 300

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN------- 544
            +AE++  EM+ RG+ P   +YN  I+ L + ER +  K +   M  +G  PN       
Sbjct: 301 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 360

Query: 545 ---VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA-----FRVMRTDGLKPSNL---- 592
              ++ YT L+D   + GRFD+A      + D+ +       + VM     K   +    
Sbjct: 361 IVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKAL 420

Query: 593 ---------------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                            N L++    D R ++A  +L  M + G  PD VTY TL+ A+ 
Sbjct: 421 QIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 480

Query: 638 RVDK 641
           +  K
Sbjct: 481 KCGK 484



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 244/575 (42%), Gaps = 60/575 (10%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKN 135
           S Q   + F  LL  L  ++  E A  L      +             VP    ++ L +
Sbjct: 37  SCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG-----------CVPDDAIYNALIS 85

Query: 136 LCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LT 192
             S       A+  ++ + K N C    + Y+ ++  L ++E+  +A  L    R    +
Sbjct: 86  GYSKAKDFGQAFKFLAEMVK-NHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144

Query: 193 P--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           P   TYN ++        L++A  ++ +M   GY  D + Y+  I+ L + +++D +  +
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA--R 202

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K    +    +  D      VI G  K+GD   A R L      G +P   TY+++I   
Sbjct: 203 KFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGF 259

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G    A  + + + + G +P   AYN+LL    ++G++  AE ++ EMER G  PD 
Sbjct: 260 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 319

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            +Y+  ID    A R + A+ V   M      PN+  YS ++                  
Sbjct: 320 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV----------------- 362

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPDTITWNTLIDCHFKCG 489
                   D   Y V++D   K      A A F ++L E I EPD   +N ++D H K  
Sbjct: 363 --------DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D+A ++ ++M E+       T+NI+++ L   +R  D + +L  M  +G +P+ VTY 
Sbjct: 415 QIDKALQIHKQMLEKNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 473

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TLVD   + G+   A+E    L ++AV         G  P  +  ++LI     +    E
Sbjct: 474 TLVDAMCKCGKSAAALE----LFEEAVKG-------GCVPDVVTYSALITGLVHENMAEE 522

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           A+ +   + E    PD  T   L + L  ++K  K
Sbjct: 523 AYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRK 557



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 14/351 (3%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +G      TY  ++  L+   R  +A AVF+E+ +   +P    +  LL+G  +   L+ 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++  M+  G +PD+  Y+ LI  Y+ A  +  A   L EM  +H  P    Y+ I+ 
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G       +   ++L EM+  G  P+ + YNV+++   +   L  A    + M   G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+N+ I    KC R D A +    M      P   +Y  +IN L +    +   R+L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M  +G  P+VVTY++L+D + + G  + A+    GL D        M   G +P+ +A
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM----GLLDS-------MLKLGCRPNMVA 286

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            NSL+ A        +A  +L  M+  G  PDVV+Y   +  L + ++  K
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 337


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 221/482 (45%), Gaps = 34/482 (7%)

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I A  ++     A  +  KM++     + +  + ++ SL R     SS      +E   D
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVR---YPSSHSVSFSREAFND 198

Query: 260 KIEL----DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
            I+L    +    N VI G+        A+ FL +      SP   TY  ++  L   GR
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  +  ++K  GL P    YN L+ GY KMG+LK+A  V+  M ++ +LPD  TY++
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+   N GR E A  +  EME     P+   Y+ ++ G  +  +    F++L+EM   G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V+P+   +N+M+  + K   +  A     +M   G  PD +T+NTLI+ + K G    A 
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
              +EM  +     + T N ++  L  +++ E+  +LL + R +G   + V+Y TL+  Y
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498

Query: 556 GQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
            + G  D A++                        C  G ++QA++    +   GL P  
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
              N++++ +  +    +AF     M EN  KPDV T   L++ L     ++K  K+F++
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618

Query: 649 YL 650
           ++
Sbjct: 619 WV 620



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 217/471 (46%), Gaps = 36/471 (7%)

Query: 195 TYNALISA-CARND--DLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLL 249
           T+N +I   C  N   D  + LN+M K     Y+C  D + Y+ ++ +L +  ++  +  
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVMGK-----YNCSPDNVTYNTILDTLCKKGRLGDA-- 262

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           + L  +++   +  +    N ++ G+ K G   +A   + +     L P   TY  +I  
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L N GR  EA  + +E++   L P   +YN L+ G ++   + +A  ++ EM   GV P+
Sbjct: 323 LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPN 382

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T+++++  Y   G+ + A   + +ME S   P+   Y+ ++ GY   G     F+ + 
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM    ++ D+   N ++ T  +   L  A          G   D +++ TLI  +FK G
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             DRA +L++EM+E+   P T TYN +I  L +  + E     L  +   GLLP+  TY 
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
           T++  Y + G  + A +                        C+EG+ ++A+  F    + 
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSK 622

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           G     +  N+LI +  ++ R  +AF +L  M+E  L PD  TY  ++ AL
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 235/550 (42%), Gaps = 30/550 (5%)

Query: 89  NFLSENSNSESASALASSPS-SLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLA 146
           N L+ N+   S     SS S S +R  F  A     VP    ++ ++   C  N   D A
Sbjct: 169 NLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKD-A 227

Query: 147 YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-LTPL--TYNALIS 201
              ++ + K+N C    + Y+ ++  L +  +L +A   L+  + R L P   TYN L+ 
Sbjct: 228 VEFLNVMGKYN-CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVY 286

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
              +   L++A N++  M Q+    D   Y+++I  L    +I+ +   KL  E+E  K+
Sbjct: 287 GYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF--KLRDEMENLKL 344

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
             D    N +I G  +    S+A + L      G+ P   T+  ++      G+  +A  
Sbjct: 345 LPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASN 404

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
              +++ESG  P    YN L+ GY K G + +A   + EM R  +  D  T + ++    
Sbjct: 405 TITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLC 464

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFI----YSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              + E A  +L     S  K   FI    Y  ++ GY   G   R  ++  EMK   + 
Sbjct: 465 REKKLEEAYKLLS----SARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P T  YN +I    +      A++  + +L  G+ PD  T+NT++  + + G  ++A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M E  + P   T NI++  L  +   E   +L     ++G   + VTY TL+     
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSL-- 638

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C EG  D A N    M    L P +   N++I A  +  R  EA   +  M
Sbjct: 639 ---------CKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 618 KENGLKPDVV 627
            E G  PD V
Sbjct: 690 LEKGNLPDQV 699



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 14/353 (3%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP  A     I A   SG+   A  +F+++K   L+P     N LL   V+        F
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 357 ---VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
                ++  + G++P+ +T++++I  Y    +++ A   L  M   +  P++  Y+ IL 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
               +G       +L +MKS G+ P+ + YN+++  + K   L  A    + M    + P
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+N LI+     GR + A +L +EM+     P   +YN +IN   E  +  +  +LL
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  +G+ PN VT+  +V  Y + G+ DD           A N    M   G  P  + 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDD-----------ASNTITKMEESGFSPDCVT 420

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            N+LIN + +     EAF  +  M    +K D VT  T+++ L R  K  + +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 176/416 (42%), Gaps = 30/416 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+      K+ EAF L +       +   +T+N ++    +   ++ A N ++KM 
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D + Y+ +I    +   +  +   +   E+    +++D   LN ++    +   
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAF--RTMDEMGRKNMKMDSVTLNTILRTLCREKK 468

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A + L  A+  G      +Y  +I      G    A  +++E+KE  + P T  YN 
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  + G  + A   ++E+  SG+LPDE TY+ ++  Y   G  E A     +M  + 
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+ F  + +L G    G  ++  ++     S G   DT  YN +I +  K   L  A 
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP------------ 508
                M  + + PD  T+N +I      GR   AEE   +M E+G  P            
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETV 708

Query: 509 -----------CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
                       +  Y+  I  L  + +++D  R+ G  + +G+  +  TY  L+D
Sbjct: 709 VTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMD 764



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 32/176 (18%)

Query: 172 ALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
            L ++ KL+  ++ S+ + +  +TYN LI++  +   L+ A NL+S+M +     D   Y
Sbjct: 608 VLEKALKLFNTWV-SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666

Query: 232 SLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLL----NDVIVG----------- 274
           + +I +LT + +I  +   + K+      +K  L  Q+L    N+ +V            
Sbjct: 667 NAIITALTDSGRIREAEEFMSKML-----EKGNLPDQVLQLDKNETVVTSETSEESDSSS 721

Query: 275 ---------FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
                        G    AMR  G ++  G++   +TY  ++  L    ++I  EA
Sbjct: 722 VAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777



 Score = 39.3 bits (90), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           PS   L++ I A+ +  +   AF + + MK   L+P+++T  TL+ +L+R    H V  S
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 649 YLFFN 653
              FN
Sbjct: 193 REAFN 197


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 235/536 (43%), Gaps = 25/536 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
           V A +   LLK  C +  + D A  ++        C      Y+IL+ +L    K  +A 
Sbjct: 146 VDAIIASHLLKGFCEAKRT-DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQAD 204

Query: 183 ----FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
                +       +P  + YN +I    +  D+ KA +L  +M Q G   D + YS V+ 
Sbjct: 205 DLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 264

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           +L +   +D +  +   +++    +  D    N++I G++  G   +A+R     +   +
Sbjct: 265 ALCKARAMDKA--EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 322

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P       ++ +L   G+  EA  VF+ +   G  P   +Y  +L GY   G L D   
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +   M   G+ P   T+++LI AYAN G  + A I+  EM     KP+   Y  ++A   
Sbjct: 383 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+     +   +M   GV PD + Y+ +I  F  +  L  A      +++ G+  D +
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            + ++I+   K GR   A+ +F+     G  P    YN++++      + E   R+   M
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            + G+ PNVV Y TLV+ Y + GR D      EGLS      FR M   G+KPS +  N 
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRID------EGLS-----LFREMLQKGIKPSTILYNI 611

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           +I+   E  R   A      M E+G+  +  TY+ +++ L +    ++ F   +F 
Sbjct: 612 IIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK----NRCFDEAIFL 663



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 199/484 (41%), Gaps = 27/484 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY  L+  C R    E AL    ++ + G   D I  S +++      + D +L   
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171

Query: 252 LYK--EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           L++  E+ C        +L   +    K+G A   +R +    G   SP    Y  VI  
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG-GTVCSPDVVAYNTVIDG 230

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G   +A  +F+E+ + G+ P    Y++++    K   +  AE  + +M   GVLPD
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LI  Y++ G+W+ A  V KEM      P+    + ++      G+ +    V  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   G  PD   Y +M++ +    CL      FD ML +GI P   T+N LI  +  CG
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A  +F EM++ G  P   TY  +I  L    + +D       M  QG++P+   Y 
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
            L+  +   G    A E                        C  G    A N F +    
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL P  +  N L++ +    +  +A  V   M   G++P+VV Y TL+    ++ +  + 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 646 FSSY 649
            S +
Sbjct: 591 LSLF 594



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 2/350 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI A A    L+KA+ + ++MR  G     + Y  VI +L R  K+D ++ +K  +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM-EKFNQ 456

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  D    + +I GF   G   KA   +      G+      + ++I  L   G
Sbjct: 457 MID-QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R ++A+ +F+     GL P    YN L+ GY  +G ++ A  V   M  +G+ P+   Y 
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y   GR +    + +EM     KP++ +Y+ I+ G  + G          EM  S
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 635

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   Y++++    K  C   A+  F  + +  ++ D IT NT+I   F+  R + A
Sbjct: 636 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 695

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           ++LF  +   G  PC  TY+IMI  L ++   E+ + +  +M+  G  P+
Sbjct: 696 KDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           LSP + TYA ++   + + R   A A F +L  +GL+      + LLKG+ +     +A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME--VSHAKPNSFIYSRIL 412
           + ++      G +PD  +Y++L+ +  N G+   A  +L+ M    +   P+   Y+ ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  +   + KEM   G+ PD   Y+ ++    K   +  A A   +M+++G+ 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD  T+N LI  +   G++  A  +F+EM+ +   P     N ++  L +  + ++ + +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +G  P+V +YT +++ Y   G       CL  ++D     F +M  DG+ P   
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKG-------CLVDMTD----LFDLMLGDGIAPVIC 397

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             N LI A+       +A  +   M+++G+KP VVTY T++ AL R+ K       +
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKF 454



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/571 (23%), Positives = 238/571 (41%), Gaps = 79/571 (13%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQK----------HNLCYSYELLYSIL 169
           R +P  L  + S++  LC + + +D A A +  +            +NL Y Y       
Sbjct: 250 RGIPPDLVTYSSVVHALCKARA-MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS------ 302

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
             + G+ ++    F   +RQ + P  +  N L+ +  +   +++A ++   M   G + D
Sbjct: 303 --STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 228 FINYSLVIQS-LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             +Y++++    T+   +D   +  L+  +  D I       N +I  +A  G   KAM 
Sbjct: 361 VFSYTIMLNGYATKGCLVD---MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 417

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +  G+ P   TY  VI AL   G+  +A   F ++ + G+ P   AY+ L++G+ 
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 347 KMGYLKDAEFVVSEMERSGVL-----------------------------------PDEH 371
             G L  A+ ++SE+  +G+                                    PD  
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y++L+D Y   G+ E A  V   M  +  +PN   Y  ++ GY   G       + +EM
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G++P T  YN++ID   +      A   F  M   GI  +  T++ ++   FK   +
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 657

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A  LF+E++         T N MI  + +  R E+ K L  ++   GL+P  VTY+ +
Sbjct: 658 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIM 717

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +          + I+  EGL ++A + F  M+  G +P +  LN ++    +      A 
Sbjct: 718 I---------TNLIK--EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAG 766

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           A L  + E     + +T      A++ VD F
Sbjct: 767 AYLSKIDERNFSLEHLT------AMLLVDLF 791



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 167/396 (42%), Gaps = 8/396 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
           +D A  + + ++ H +   + + Y  +I AL R  K+ +A      ++ Q        Y+
Sbjct: 412 LDKAMIIFNEMRDHGV-KPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI     +  L KA  L+S++  +G   D + +  +I +L +  ++  +  Q ++    
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDA--QNIFDLTV 528

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D  + N ++ G+   G   KA+R        G+ P    Y  ++      GR  
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E  ++F E+ + G+KP T  YN ++ G  + G    A+    EM  SG+  ++ TYS+++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
                   ++ A  + KE+   + K +    + ++AG       +    +   +  SG+ 
Sbjct: 649 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 708

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    Y++MI    K   +  A   F  M + G EPD+   N ++    K     RA   
Sbjct: 709 PCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAY 768

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
             ++ ER +     T  ++++L   +    +  R L
Sbjct: 769 LSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 50/496 (10%)

Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L PL  TY+ LI    +   LE A +L+ +M   G   D   YSL+I  L +    D++ 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA- 331

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA------- 301
            + L  E+    I +   + +  I   +K G   KA          GL P+         
Sbjct: 332 -KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 302 ----------------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                                       TY  V+  + +SG    A  + +E+  SG +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  L+K +++     DA  V+ EM+  G+ PD   Y+ LI   + A R + AR  L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM  +  KPN+F Y   ++GY +  E+    + +KEM+  GV P+      +I+ + K 
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A +A+  M+ +GI  D  T+  L++  FK  + D AEE+F EM+ +G  P   +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            ++IN   +    +    +   M  +GL PNV+ Y  L+  + +SG  + A E L+ +S 
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS- 689

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                       GL P+ +   ++I+ + +    AEAF +   MK  GL PD   YTTL+
Sbjct: 690 ----------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 634 KALIRVDKFHKVFSSY 649
               R++   +  + +
Sbjct: 740 DGCCRLNDVERAITIF 755



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 231/517 (44%), Gaps = 58/517 (11%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R + + + +  L+  ++R   ++P TY  ++     + DL+ A N++ +M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I++  + ++   ++  ++ KE++   I  D    N +I+G +KA  
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAM--RVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
             +A  FL      GL P   TY A I                               T 
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 310 LSN----SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           L N     G+ IEA + +  + + G+    K Y  L+ G  K   + DAE +  EM   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  +Y +LI+ ++  G  + A  +  EM      PN  IY+ +L G+   GE ++  
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L EM   G+ P+   Y  +ID + K   L  A   FD M  +G+ PD+  + TL+D  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE-RWEDVKRLLGNMRAQGL 541
            +    +RA  +F    ++G    T  +N +IN +   G+ E + E + RL+     +  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VTY  ++D             C EG  + A   F  M+   L P+ +   SL+N +
Sbjct: 802 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  R AE F V       G++PD + Y+ ++ A ++
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/551 (23%), Positives = 238/551 (43%), Gaps = 59/551 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + +++K +CSS   +D AY +V  +     C    ++Y+ LI    ++ +  +A  +   
Sbjct: 420 YGTVVKGMCSS-GDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q + P    YN+LI   ++   +++A + + +M ++G   +   Y   I      ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             S+   K  KE+ EC  +  +  L   +I  + K G   +A          G+     T
Sbjct: 538 FASA--DKYVKEMRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  + +  +AE +F E++  G+ P   +Y  L+ G+ K+G ++ A  +  EM 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+   Y++L+  +  +G  E A+ +L EM V    PN+  Y  I+ GY   G+  
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF------------------- 463
             F++  EMK  G+ PD+  Y  ++D   + N +  A+  F                   
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 464 ---------------DRMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
                          +R++    +    P+ +T+N +ID   K G  + A+ELF +MQ  
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  ++N   +  R  ++  +     A G+ P+ + Y+ +++ + + G    A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 565 IECLEGLSDQ--AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +     L DQ  A NA      DG K S     +L++ F +      A  V++ M     
Sbjct: 895 LV----LVDQMFAKNAV----DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946

Query: 623 KPDVVTYTTLM 633
            PD  T   L+
Sbjct: 947 IPDSATVIELI 957



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P   TY  +I  L    R  +A+++  E+   G+      Y+ L+ G +K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +V EM   G+    + Y   I   +  G  E A+ +   M  S   P +  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y      ++ +++L EMK   +    + Y  ++        L  A      M++ G  P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + + TLI    +  R+  A  + +EM+E+G  P    YN +I  L + +R ++ +  L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL PN  TY   +  Y ++  F  A        D+ V   + MR  G+ P+ +  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASA--------DKYV---KEMRECGVLPNKVLC 560

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             LIN + +  +  EA +  + M + G+  D  TYT LM  L + DK
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 47/368 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  L++   +ND ++ A  +  +MR  G   D  +Y ++I   ++   +  +    ++ 
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA--SSIFD 651

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+  + +  +  + N ++ GF ++G+  KA   L      GL P   TY  +I     SG
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-------------------- 354
              EA  +F+E+K  GL P +  Y  L+ G  ++  ++ A                    
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771

Query: 355 ------EFVVSEMERSGVL-------------PDEHTYSLLIDAYANAGRWESARIVLKE 395
                 +F  +E+ ++ VL             P++ TY+++ID     G  E+A+ +  +
Sbjct: 772 LINWVFKFGKTEL-KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M+ ++  P    Y+ +L GY   G     F V  E  ++G+EPD   Y+V+I+ F K   
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 456 LHHAMAAFDRMLS-----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
              A+   D+M +     +G +    T   L+    K G  + AE++ E M    Y P +
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950

Query: 511 TTYNIMIN 518
            T   +IN
Sbjct: 951 ATVIELIN 958



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 147/381 (38%), Gaps = 69/381 (18%)

Query: 320 EAVFEELKESGLK--PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EAVF      GL+  PR      LL   ++   L     V   M    V+ D  TY +LI
Sbjct: 169 EAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLI 228

Query: 378 DAYANAGRWESARIVL---------------------KEMEVSHAKPNSFIYSRILAGYR 416
            A+  AG  +  + VL                     + M      P  + Y  ++ G  
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK------------------------ 452
                +    +L EM S GV  D H Y+++ID   K                        
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348

Query: 453 -YNC----------LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+C          +  A A FD M++ G+ P    + +LI+ + +     +  EL  EM
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ++R       TY  ++  +      +    ++  M A G  PNVV YTTL+  + Q+ RF
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            DA+  L+ + +Q           G+ P     NSLI    + +R  EA + L  M ENG
Sbjct: 469 GDAMRVLKEMKEQ-----------GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 622 LKPDVVTYTTLMKALIRVDKF 642
           LKP+  TY   +   I   +F
Sbjct: 518 LKPNAFTYGAFISGYIEASEF 538


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 248/551 (45%), Gaps = 51/551 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + +L+  LC +   +D+A  ++         +++    S L+H L ++ +L EA  L + 
Sbjct: 249 YDALIDGLCKAGK-LDIALGLLRDKNSQAGMFAF----SSLLHGLCQAHRLEEAIQLLKA 303

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
               P  + +N+L++   +   +++A  L   M++ G   D I Y+++++ L +  +I  
Sbjct: 304 MPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPE 363

Query: 247 SLLQKLYKEIE----CDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTA 301
           +     Y+ +E     +    +    + +I G   AG  ++A   +  M    G+SP   
Sbjct: 364 A-----YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKE---------------------SGLKPRTKAYNA 340
           TYA ++  L  +G +   E  FE++ E                        +P    YN 
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G ++DA  ++  M  SG+ PD  T++ ++D      R   A  V K      
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 538

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +PN   YS ++ G     +     Q+L +M   G   +T  Y+ ++D   K   +  A+
Sbjct: 539 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 598

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               +M   G  PD +T+NTLID  FK  R   A  L  EM E G+ P   TY  + + L
Sbjct: 599 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 658

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               R+++   +L  M A+G  PN +TY+++VD   ++GR  +A+   E          +
Sbjct: 659 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE----------K 708

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--- 637
           + R + + P  +A ++LI+   +  R  EA+  L+ M   G  PDVVT++ L+  L    
Sbjct: 709 MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 638 RVDKFHKVFSS 648
           R+D   ++F  
Sbjct: 769 RIDTGLELFCG 779



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 143/602 (23%), Positives = 275/602 (45%), Gaps = 59/602 (9%)

Query: 78  QKQRYDFTPLLNFLSENSNSESA-SALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNL 136
           Q   + F+ LL+ L +    E A   L + P   N V F              +SL+  L
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCF--------------NSLMNGL 320

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----LLSQRQRLT 192
           C +   +D A+ +   + K + C +  + Y+IL+  L +  ++ EA+    L+ + +  +
Sbjct: 321 CQARR-VDEAFELFD-VMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCS 378

Query: 193 P--LTYNALISACARNDDLEKALNLMSKMRQ-DGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           P  +T++ LI        + +A  +  +M   +G   +   Y+ +++ L +    DS  L
Sbjct: 379 PNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG--DSRRL 436

Query: 250 QKLYKEI-----------ECDKIELDGQLL----------NDVIVGFAKAGDASKAMRFL 288
           ++ ++++                E+D  ++          N ++ G +K+G    A+  L
Sbjct: 437 EQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLL 496

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 GLSP   T+ +V+  L    R ++A  VF+   E G +P    Y+ L+ G  KM
Sbjct: 497 EFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKM 556

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
             + +A  ++++M   G   +  TYS ++D     GR E A +VL++M  +   P++  Y
Sbjct: 557 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 616

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ G+  R   +    +L+EM  +G  P    Y  +     +      A+   D M +
Sbjct: 617 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 676

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWE 527
            G  P+ IT+++++D   K GR   A   FE+M ++    P    Y+ +I+ L +  R +
Sbjct: 677 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRID 736

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +    L  M   G +P+VVT++ L++    +GR D  +E   G++++           G 
Sbjct: 737 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER-----------GC 785

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           K    A N++INA+      + A+A+L+ MK +G+  + VT+  ++KAL   D+  +  S
Sbjct: 786 KADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVS 845

Query: 648 SY 649
            +
Sbjct: 846 YF 847



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 251/575 (43%), Gaps = 86/575 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K LC     I+ A+ VV  +         E+ +++L+HAL    ++ EA+   Q+  L
Sbjct: 112 IIKGLCKEGE-IEAAFRVVDEMVDRGFVPDVEI-HTVLLHALCELGRVDEAWFFFQQVLL 169

Query: 192 ---TP--LTYNALISACARN-----------------------------DDLEKALNL-- 215
              TP  +TYN ++    +                              D L KA NL  
Sbjct: 170 IGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTG 229

Query: 216 ----MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL-LND 270
                  M Q G   + + Y  +I  L +  K+D +L   L +    DK    G    + 
Sbjct: 230 AYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL--GLLR----DKNSQAGMFAFSS 283

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           ++ G  +A    +A++ L   + +   P    + +++  L  + R  EA  +F+ +KESG
Sbjct: 284 LLHGLCQAHRLEEAIQLL---KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG 340

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESA 389
                  YN LLKG  K+  + +A   V  M R+ G  P+  T+S LI    NAGR   A
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400

Query: 390 RIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-----KSSGV----EPD 439
             V + M  V    PN F Y+ +L G    G+ +R  Q  ++M     +SS       P+
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE 460

Query: 440 THF------------YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             F            YN ++    K   +  A+   + M+  G+ PD IT+N+++D   K
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCK 520

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             R   A  +F+   ERG  P   TY+ +I+ L +  + ++  +LL  M   G   N VT
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y+T+VD   + GR +DA+  L           R MR  G  P  +  N+LI+ F + QR 
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVL-----------RQMRDAGCLPDAVTYNTLIDGFFKRQRL 629

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            EA  +L+ M E G  P VVTYTTL   L R  +F
Sbjct: 630 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 664



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 212/484 (43%), Gaps = 27/484 (5%)

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           FL+ Q  R T +TYN L++  +++  +  AL L+  M + G   D I ++ V+  L +  
Sbjct: 463 FLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQ 522

Query: 243 KI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +I D+  + K   E  C    +    L D   G +K     +A++ L     +G    T 
Sbjct: 523 RILDAHNVFKRALERGCRPNVVTYSTLID---GLSKMAKMDEALQLLAKMVELGCRANTV 579

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY+ V+  L   GR  +A  V  +++++G  P    YN L+ G+ K   L++A  ++ EM
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +G  P   TY+ L      +GR++ A  +L  M      PN+  YS I+ G    G  
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699

Query: 422 QRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                  ++M +   V P    Y+ +ID   K   +  A    +RM+  G  PD +T++ 
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSI 759

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI+     GR D   ELF  M ERG       YN MIN    +  +     LL  M+  G
Sbjct: 760 LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAI--------ECLEGL--------------SDQAVNA 578
           +  N VT+  ++     + R D+A+        +C + +              S+QA+  
Sbjct: 820 IAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALEL 879

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            R M  DG  P      ++++   +      A  +LQ M+  G  PD+ TYT ++  L +
Sbjct: 880 LRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSK 939

Query: 639 VDKF 642
             + 
Sbjct: 940 AKQL 943



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 220/537 (40%), Gaps = 83/537 (15%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI+   +   +  A     K  Q G+    + YS VI  L R N++D     KL 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGC--KLL 59

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+       +    N ++      G A +A   L      G  P+  T+  +I  L   
Sbjct: 60  EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  V +E+ + G  P  + +  LL    ++G + +A F   ++   G  PD  TY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++D    AGR E+A +VL+ +  S + P  F ++  + G    G     ++    M  
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 434 SGVEPDTHFYNVMIDTFGK----------------------YNCLHHAMAAFDRMLSEGI 471
           +GV P+T  Y+ +ID   K                      ++ L H +    R L E I
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHR-LEEAI 298

Query: 472 E--------PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           +        P+ + +N+L++   +  R D A ELF+ M+E G      TYNI++  L + 
Sbjct: 299 QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358

Query: 524 ERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------- 566
            R  +  R +  M R +G  PNVVT++TL+     +GR + A E                
Sbjct: 359 RRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRF 418

Query: 567 ---------CLEGLSDQAVNAFRVM----------------RTDGL-----KPSNLALNS 596
                    C  G S +    F  M                  D L     +P+ +  N+
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
           L+    +     +A  +L++M E+GL PDV+T+ +++  L    R+   H VF   L
Sbjct: 479 LVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 535



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 254/542 (46%), Gaps = 39/542 (7%)

Query: 109  SLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSI 168
            +L  +EF + ES  +     ++S+L  LC     +D        L++   C    + YS 
Sbjct: 492  ALGLLEF-MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG--CRPNVVTYST 548

Query: 169  LIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
            LI  L +  K+ EA  L  +      R   +TY+ ++    +   +E A+ ++ +MR  G
Sbjct: 549  LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608

Query: 224  YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV------GFAK 277
               D + Y+ +I    +  ++  ++   L +E+      L+      V+       G  +
Sbjct: 609  CLPDAVTYNTLIDGFFKRQRLREAV--GLLREM------LEAGFHPSVVTYTTLCHGLCR 660

Query: 278  AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTK 336
            +G   +A+  L      G +P   TY++++  L  +GR  EA   FE++ ++  + P   
Sbjct: 661  SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 720

Query: 337  AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            AY+AL+ G  K G + +A   +  M R+G +PD  T+S+LI+   +AGR ++   +   M
Sbjct: 721  AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 397  EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 K + + Y+ ++  Y  +GE+   + +L+EMK+ G+  +T  + ++I      + +
Sbjct: 781  AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 457  HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
              A++ F  +  +    D I++NTLI       R ++A EL   M   G  P    Y  +
Sbjct: 841  DEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTV 898

Query: 517  INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            ++ L +    E   +LL  MR++G  P++ TYT ++    ++ +              A 
Sbjct: 899  MDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP-----------LAC 947

Query: 577  NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            + F  M    LKP  +  +SLI+AF +  +  +A+ +L   + +G++P +  Y+T++ +L
Sbjct: 948  DYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSL 1004

Query: 637  IR 638
             +
Sbjct: 1005 CK 1006



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 221/524 (42%), Gaps = 76/524 (14%)

Query: 115  FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            FK A      P  + +S L +  S  + +D A  +++ + +   C +  + YS ++  L 
Sbjct: 531  FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG-CRANTVTYSTVVDGLL 589

Query: 175  RSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            +  ++ +A ++ ++ R     P  +TYN LI    +   L +A+ L+ +M + G+H   +
Sbjct: 590  KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 230  NYSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC-------DKI 261
             Y+ +   L R+ + D                     SS++  L K           +K+
Sbjct: 650  TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 262  ELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
              D  +   VI       G  KAG   +A  FL      G  P   T++ +I  L ++GR
Sbjct: 710  ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 316  TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV--------- 366
                  +F  + E G K    AYNA++  Y   G    A  ++ EM+  G+         
Sbjct: 770  IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGI 829

Query: 367  --------------------LP----DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
                                +P    DE +Y+ LI +   + R E A  +L+ M      
Sbjct: 830  VIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 403  PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
            P++  Y  ++ G    G  +   ++L+EM+S G  PD   Y +MI    K   L  A   
Sbjct: 890  PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 463  FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            F+ ML + ++PD I +++LID   K  + D A +L   ++  G  P  T Y+ M++ L +
Sbjct: 950  FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCK 1006

Query: 523  QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                +    ++  M+++   P +  +T+L   Y   GR D+A++
Sbjct: 1007 NRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVK 1050



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 183/415 (44%), Gaps = 15/415 (3%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----L 184
            + +L   LC S    D A  ++ ++     C    + YS ++  L ++ ++ EA      
Sbjct: 651  YTTLCHGLCRSGR-FDEAVEILDYMAARG-CAPNAITYSSIVDGLCKAGRVTEALGYFEK 708

Query: 185  LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +++ + + P  + Y+ALI    +   +++A   + +M + G   D + +S++I  L    
Sbjct: 709  MARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 768

Query: 243  KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +ID+ L  +L+  +     + D    N +I  +   G+ S A   L   +  G++  T T
Sbjct: 769  RIDTGL--ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVT 826

Query: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
            +  VI AL  + R  EA + F  + E        +YN L+   V     + A  ++  M 
Sbjct: 827  HGIVIKALCGNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRRSEQALELLRAMV 884

Query: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              G  PD   Y  ++D    AG  E A  +L+EM      P+   Y+ +++G     +  
Sbjct: 885  ADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP 944

Query: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
                  +EM    ++PD   Y+ +ID F K + +  A   +  + S GIEP    ++T++
Sbjct: 945  LACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMV 1001

Query: 483  DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            D   K    D+A E+  EM+ +   P    +  +      + R ++  +L+ +++
Sbjct: 1002 DSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 14/186 (7%)

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +T+N LI+   K GR   A   F +  + G+ P   TY+ +I+ L      +   +LL  
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M  +G  PN VTY TLV+     GR  +A   LE            M  +G  P  +   
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLER-----------MAANGCPPELITFG 110

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
            +I    ++     AF V+  M + G  PDV  +T L+ AL    +  +V  ++ FF   
Sbjct: 111 LIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALC---ELGRVDEAWFFFQQV 167

Query: 656 KMLSYS 661
            ++ ++
Sbjct: 168 LLIGFT 173


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 190/402 (47%), Gaps = 15/402 (3%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L+K   C     D    + +I GF KA D  +A R L   +  G+ P  A Y  +I  L 
Sbjct: 20  LFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLC 79

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           ++GR   A   + +++     P    Y  L+    K   + DA  ++ +M  +G  P+  
Sbjct: 80  DNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVV 138

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ LI+ +   G  + A ++  +M  +   P+ F Y+ ++ GY  +   Q   ++L+EM
Sbjct: 139 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 198

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G EP+   YN ++D+  K      A      ML    +P   T+N +ID   K G+ 
Sbjct: 199 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQL 258

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A ELF+ M +RG  P   TYNIMI+      R +D ++LL  M   G  P+VVTY ++
Sbjct: 259 DLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI 318

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           V    ++ + D+A E            + V+R  G     +  ++LI+   + +R  +A 
Sbjct: 319 VSGLCKASQVDEAYE-----------VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            +L+ M+ NG  PDVV YT L+    + D+  K   S  FF+
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDK---SLAFFS 406



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 198/443 (44%), Gaps = 16/443 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L+SA  R    ++A +L           D I YS +I    +      +   +L  E+
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAY--RLLDEM 59

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           E   I     + N +I G    G    A+  +  M +    +P   TY  ++ AL  S R
Sbjct: 60  EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHC--APSVITYTILVDALCKSAR 117

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  + E++ E+G  P    YN L+ G+ K+G + +A  + ++M  +   PD  TY++
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID Y    R +    +L+EM     +PN   Y+ ++      G++   F + + M    
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
            +P    +N+MID F K   L  A   F  M   G  PD  T+N +I    +  R D A 
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L E M E G  P   TYN +++ L +  + ++   +   +R  G   +VVT +TL+D  
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            +S R DDA + L           R M  +G  P  +A   LI+ F +  +  ++ A   
Sbjct: 358 CKSRRLDDAEKLL-----------REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 406

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M + G  P V+TY+ ++  L +
Sbjct: 407 EMLDKGCVPTVITYSIVIDKLCK 429



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 201/450 (44%), Gaps = 43/450 (9%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + L+ A  R +K  EA+ L +       +P  +TY+ LI+   +  D ++A  L+ +M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G       Y+ +I+ L    ++DS+L+     +  C    +   +L D +   A+  DA
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           S  +  +  A   G +P   TY  +I      G   EA  +F ++ E+   P    YN L
Sbjct: 122 SLILEDMIEA---GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY K    +D   ++ EM + G  P+  TY+ L+D+   +G++  A  + + M     
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+ F ++ ++  +   G+    +++ + M   G  PD + YN+MI    + N +  A  
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             +RM   G  PD +T+N+++    K  + D A E++E ++  GYF    T + +I+ L 
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 522 EQERWEDVKRLLGNMRA-----------------------------------QGLLPNVV 546
           +  R +D ++LL  M                                     +G +P V+
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVI 418

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           TY+ ++D   +S R  D    L+ + ++ V
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 181/419 (43%), Gaps = 45/419 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++++++K LC  N  +D A      +Q+H  C    + Y+IL+ AL +S ++ +A L+ +
Sbjct: 70  VYNTIIKGLCD-NGRVDSALVHYRDMQRH--CAPSVITYTILVDALCKSARISDASLILE 126

Query: 188 ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
                   P  +TYN LI+   +  ++++A+ L ++M ++    D   Y+++I       
Sbjct: 127 DMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID------ 180

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
                                          G+ K        + L      G  P   T
Sbjct: 181 -------------------------------GYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++ +L  SG+ I+A  + + +     KP    +N ++  + K+G L  A  +   M 
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 269

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G LPD +TY+++I     A R + AR +L+ M  +   P+   Y+ I++G     +  
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++V + +++ G   D    + +ID   K   L  A      M   G  PD + +  LI
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
               K  + D++   F EM ++G  P   TY+I+I+ L +  R  D   LL  M  +G+
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 12/237 (5%)

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +L+ +  + + Q  + + K        PD+  Y+ +I+ F K      A    D M   G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I P    +NT+I      GR D A   + +MQ R   P   TY I+++ L +  R  D  
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDAS 122

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +L +M   G  PNVVTY TL++ + + G  D           +AV  F  M  +   P 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMD-----------EAVVLFNQMLENSCSPD 171

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
               N LI+ + + +R  +   +LQ M + G +P+ +TY TLM +L++  K+   F+
Sbjct: 172 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 228


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 50/496 (10%)

Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L PL  TY+ LI    +   LE A +L+ +M   G   D   YSL+I  L +    D++ 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA- 331

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA------- 301
            + L  E+    I +   + +  I   +K G   KA          GL P+         
Sbjct: 332 -KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 302 ----------------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                                       TY  V+  + +SG    A  + +E+  SG +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  L+K +++     DA  V+ EM+  G+ PD   Y+ LI   + A R + AR  L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM  +  KPN+F Y   ++GY +  E+    + +KEM+  GV P+      +I+ + K 
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A +A+  M+ +GI  D  T+  L++  FK  + D AEE+F EM+ +G  P   +Y
Sbjct: 571 EKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            ++IN   +    +    +   M  +GL PNV+ Y  L+  + +SG  + A E L+ +S 
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS- 689

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                       GL P+ +   ++I+ + +    AEAF +   MK  GL PD   YTTL+
Sbjct: 690 ----------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 634 KALIRVDKFHKVFSSY 649
               R++   +  + +
Sbjct: 740 DGCCRLNDVERAITIF 755



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 229/517 (44%), Gaps = 58/517 (11%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R + + + +  L+  ++R   ++P TY  ++     + DL+ A N++ +M 
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I++  + ++   ++  ++ KE++   I  D    N +I+G +KA  
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAM--RVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR------ 334
             +A  FL      GL P   TY A I+    +     A+   +E++E G+ P       
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 335 -----------------------------TKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
                                         K Y  L+ G  K   + DAE +  EM   G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  +Y +LI+ ++  G  + A  +  EM      PN  IY+ +L G+   GE ++  
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L EM   G+ P+   Y  +ID + K   L  A   FD M  +G+ PD+  + TL+D  
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE-RWEDVKRLLGNMRAQGL 541
            +    +RA  +F    ++G    T  +N +IN +   G+ E + E + RL+     +  
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VTY  ++D             C EG  + A   F  M+   L P+ +   SL+N +
Sbjct: 802 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  R AE F V       G++PD + Y+ ++ A ++
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 132/555 (23%), Positives = 245/555 (44%), Gaps = 67/555 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + +++K +CSS   +D AY +V  +     C    ++Y+ LI    ++ +  +A  +   
Sbjct: 420 YGTVVKGMCSS-GDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + Q + P    YN+LI   ++   +++A + + +M ++G   +   Y   I      ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 244 IDSSLLQKLYKEI-EC----DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
             S+   K  KE+ EC    +K+   G L+N+      K  +A  A R + + QG+    
Sbjct: 538 FASA--DKYVKEMRECGVLPNKVLCTG-LINEYCKK-EKVIEACSAYRSM-VDQGILGDA 592

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           KT  Y  ++  L  + +  +AE +F E++  G+ P   +Y  L+ G+ K+G ++ A  + 
Sbjct: 593 KT--YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM   G+ P+   Y++L+  +  +G  E A+ +L EM V    PN+  Y  I+ GY   
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF--------------- 463
           G+    F++  EMK  G+ PD+  Y  ++D   + N +  A+  F               
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770

Query: 464 -------------------DRMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEE 500
                              +R++    +    P+ +T+N +ID   K G  + A+ELF +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           MQ     P   TY  ++N   +  R  ++  +     A G+ P+ + Y+ +++ + + G 
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890

Query: 561 FDDAIECLEGLSDQ--AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
              A+     L DQ  A NA      DG K S     +L++ F +      A  V++ M 
Sbjct: 891 TTKALV----LVDQMFAKNAV----DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942

Query: 619 ENGLKPDVVTYTTLM 633
                PD  T   L+
Sbjct: 943 RLQYIPDSATVIELI 957



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 11/347 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P   TY  +I  L    R  +A+++  E+   G+      Y+ L+ G +K      A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +V EM   G+    + Y   I   +  G  E A+ +   M  S   P +  Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y      ++ +++L EMK   +    + Y  ++        L  A      M++ G  P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + + TLI    +  R+  A  + +EM+E+G  P    YN +I  L + +R ++ +  L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL PN  TY   +  Y ++  F  A        D+ V   + MR  G+ P+ +  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASA--------DKYV---KEMRECGVLPNKVLC 560

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             LIN + + ++  EA +  + M + G+  D  TYT LM  L + DK
Sbjct: 561 TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 52/405 (12%)

Query: 163 ELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           ++L + LI+   + EK+ EA      ++ Q       TY  L++   +ND ++ A  +  
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +MR  G   D  +Y ++I   ++   +  +    ++ E+  + +  +  + N ++ GF +
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKA--SSIFDEMVEEGLTPNVIIYNMLLGGFCR 674

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +G+  KA   L      GL P   TY  +I     SG   EA  +F+E+K  GL P +  
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734

Query: 338 YNALLKGYVKMGYLKDA--------------------------EFVVSEMERSGVL---- 367
           Y  L+ G  ++  ++ A                          +F  +E+ ++ VL    
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL-KTEVLNRLM 793

Query: 368 ---------PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
                    P++ TY+++ID     G  E+A+ +  +M+ ++  P    Y+ +L GY   
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-----EGIEP 473
           G     F V  E  ++G+EPD   Y+V+I+ F K      A+   D+M +     +G + 
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
              T   L+    K G  + AE++ E M    Y P + T   +IN
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 138/369 (37%), Gaps = 42/369 (11%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VG S     +  +       G   EA  VF       L PR      LL   ++   L  
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL--KEMEVSHAKPNSFIYSRI 411
              V   M    V+ D  TY +LI A+  AG  +  + VL   E E   A  N       
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV------ 258

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
                         ++ + M   G+ P  + Y+V+ID   K   L  A +    M S G+
Sbjct: 259 ----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             D  T++ LID   K    D A+ L  EM   G       Y+  I ++ ++   E  K 
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
           L   M A GL+P    Y +L++ Y +        E                        C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G  D A N  + M   G +P+ +   +LI  F ++ R  +A  VL+ MKE G+ PD+ 
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488

Query: 628 TYTTLMKAL 636
            Y +L+  L
Sbjct: 489 CYNSLIIGL 497


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 211/451 (46%), Gaps = 13/451 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            T N +I+       +  A + +SK+ + GY  + I  + +++ L    K+  +L  + +
Sbjct: 94  FTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEAL--RFH 151

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++      L G     +I G  K G+   A+R L   +   + P    Y+ +I  L   
Sbjct: 152 DKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKD 211

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  ++ E+   G+ P    Y+ L+ G+  +G L  A  +++EM    + PD +TY
Sbjct: 212 TLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTY 271

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+DA    G+ + A  VL  M  +    +  +YS ++ GY    E     +V   M  
Sbjct: 272 TILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQ 331

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD H Y++MI+   K   +  A+  F+ +  + + PDT+T+ +LIDC  K GR   
Sbjct: 332 MGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY 391

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +LF+EM +RG  P   TYN +I+ L +    +    L   M+ Q + PNV T+T L+D
Sbjct: 392 VWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLD 451

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR  +A+E            F+ + T G   +      +IN   ++    EA A+
Sbjct: 452 GLCKVGRLKNALE-----------FFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL 500

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              M++NG   D VT+  +++A    D+  K
Sbjct: 501 QSRMEDNGCISDAVTFEIMIRAFFDKDENDK 531



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 205/459 (44%), Gaps = 24/459 (5%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           L      L PLT+NA        DD     N M  +    +     +++ ++ SL    +
Sbjct: 25  LCFHSHSLPPLTHNA--------DDAVSQFNHMFHVHPTPHT---FHFNKILISLVNVKR 73

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             +++   LYK++E  ++E D   LN +I  F   G    A   +     +G  P T T 
Sbjct: 74  YPTAI--SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITL 131

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   G+  EA    +++   G +    +Y  L+ G  K+G  + A  ++  +ER
Sbjct: 132 NTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIER 191

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + P+   YS++ID        + A  +  EM      P+   YS +++G+   G+  R
Sbjct: 192 WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNR 251

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +L EM    + PD + Y +++D   K   +  A      M+   +  D + ++TL+D
Sbjct: 252 AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            +      + A+ +F  M + G  P    Y+IMIN L + +R ++   L   +  + ++P
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           + VTYT+L+D   +SGR     +  + + D+           G  P  +  N+LI+A  +
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDR-----------GQPPDVITYNNLIDALCK 420

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +     A A+   MK+  ++P+V T+T L+  L +V + 
Sbjct: 421 NGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRL 459



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 184/401 (45%), Gaps = 7/401 (1%)

Query: 169 LIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L+  L    K+ EA      +L+Q  RL+ ++Y  LI+   +  +   A+ L+ ++ +  
Sbjct: 134 LMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWS 193

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              + + YS++I  L +   +D +    LY E+    I  D    + ++ GF   G  ++
Sbjct: 194 IRPNVVIYSMIIDRLCKDTLVDEA--YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNR 251

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+  L       ++P   TY  ++ AL   G+  EAE V   + ++ +      Y+ L+ 
Sbjct: 252 AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY  +  + +A+ V   M + GV PD H YS++I+      R + A  + +E+   +  P
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           ++  Y+ ++      G     + +  EM   G  PD   YN +ID   K   L  A+A F
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALF 431

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           ++M  + I P+  T+  L+D   K GR   A E F+++  +GY     TY +MIN L ++
Sbjct: 432 NKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKE 491

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              ++   L   M   G + + VT+  ++  +      D A
Sbjct: 492 GLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKA 532



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 184/399 (46%), Gaps = 20/399 (5%)

Query: 117 LAESYRAVPAPLWHSLLKNLCS---SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           LA+ +R +    +  L+  +C    + ++I L   +  W  + N+     ++YS++I  L
Sbjct: 155 LAQGFR-LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNV-----VIYSMIIDRL 208

Query: 174 GRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            +   + EA+ L      + ++P  +TY+ L+S       L +A++L+++M  +  + D 
Sbjct: 209 CKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI 268

Query: 229 INYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             Y++++ +L +  K+  +  +L  + K      + LD  + + ++ G+    + + A R
Sbjct: 269 YTYTILVDALCKEGKVKEAENVLAVMVKAC----VNLDVVVYSTLMDGYCLVNEVNNAKR 324

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                  +G++P    Y+ +I  L    R  EA  +FEE+ +  + P T  Y +L+    
Sbjct: 325 VFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLC 384

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G +     +  EM   G  PD  TY+ LIDA    G  + A  +  +M+    +PN +
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVY 444

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +L G    G  +   +  +++ + G   +   Y VMI+   K   L  A+A   RM
Sbjct: 445 TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRM 504

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
              G   D +T+  +I   F     D+AE+L  EM  RG
Sbjct: 505 EDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 163/353 (46%), Gaps = 11/353 (3%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P T  +  ++ +L N  R   A +++++++ S ++P     N ++  +   G +  A  
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
            VS++ + G  P+  T + L+      G+ + A     ++     + +   Y  ++ G  
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             GE +   ++L+ ++   + P+   Y+++ID   K   +  A   +  M+ +GI PD +
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ L+      G+ +RA +L  EM      P   TY I+++ L ++ + ++ + +L  M
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
               +  +VV Y+TL+D Y           CL    + A   F  M   G+ P     + 
Sbjct: 295 VKACVNLDVVVYSTLMDGY-----------CLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +IN   + +R  EA  + + + +  + PD VTYT+L+  L +  +   V+  +
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 235/516 (45%), Gaps = 37/516 (7%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS LI A  +  +   A   L+  R+R   L  +TYN LI+   R+  +E+A      M 
Sbjct: 247 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 306

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y  +I  L ++ + + +  + L  E+ C +++ +  +  ++I GF + G+
Sbjct: 307 DYGLVPDGFTYGALINGLCKSRRSNEA--KALLDEMSCAELKPNVVVYANLIDGFMREGN 364

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A +A + +      G+ P   TY  ++  L   G+   A  + +++     +P T  YN 
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +++G+ +    KDA  ++SEME +G+ P+ +TYS++I     +G  E A  +L+EM    
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN+F+Y+ +++GY   G      ++  +M    V PD + YN +I    K   +  + 
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M   G+ P+  T++ LI  + K G  + AE+L + M + G  P    Y   I+LL
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY---IDLL 601

Query: 521 GEQERWEDVKRL---LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS----- 572
               + +D++++     +M  QG++ +   Y  L+     SG  + A   L G+      
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661

Query: 573 -------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                              ++A      M   G+ P+ +  N+LI+   +    + A  V
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              +   GL P+ VTYT+L+    +V      F  Y
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 757



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 235/503 (46%), Gaps = 36/503 (7%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ----DGYHCD 227
           GR +   E  L+ + + + P     NAL+    R D    A+ L+ K+R+     G   D
Sbjct: 188 GRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRAD----AMALLWKVREFMVGAGISPD 243

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
              YS +I++  +  + D++  +K+  E+      L+    N +I G  ++G   +A  F
Sbjct: 244 VYTYSTLIEAYCKVREFDTA--KKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 301

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
               +  GL P   TY A+I  L  S R+ EA+A+ +E+  + LKP    Y  L+ G+++
Sbjct: 302 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 361

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G   +A  ++ EM  +GV P++ TY  L+      G+ + A ++LK+M     +P++  
Sbjct: 362 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 421

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ I+ G+      +  F++L EM+++G+ P+ + Y++MI    +      A    + M 
Sbjct: 422 YNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 481

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           ++G++P+   +  LI  + + G    A E+F++M +    P    YN +I  L +  R E
Sbjct: 482 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 541

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----------- 576
           +  +    M+ +GLLPN  TY+ L+  Y ++G  + A + ++ + D  +           
Sbjct: 542 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 601

Query: 577 -------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                        + F+ M   G+   N     LI+          AF VL  +++NG  
Sbjct: 602 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661

Query: 624 PDVVTYTTLMKALIRVDKFHKVF 646
           PDV  Y++L+  L +     K F
Sbjct: 662 PDVHVYSSLISGLCKTADREKAF 684



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 24/381 (6%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G G+SP   TY+ +I A         A+ V  E++E G    T  YN L+ G  + G ++
Sbjct: 237 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 296

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A     +ME  G++PD  TY  LI+    + R   A+ +L EM  +  KPN  +Y+ ++
Sbjct: 297 EAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLI 356

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G     F+++KEM ++GV+P+   Y+ ++    K   +  A     +M+ +   
Sbjct: 357 DGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHR 416

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PDTIT+N +I+ HF+      A  L  EM+  G  P   TY+IMI+ L +    E    L
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------GLS- 572
           L  M  +GL PN   Y  L+  Y + G    A E  +                   GLS 
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536

Query: 573 ----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               +++   F  M+  GL P+    + LI+ + ++     A  ++Q M + GLKP+ V 
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           Y  L+++  + D   KV S++
Sbjct: 597 YIDLLESYFKSDDIEKVSSTF 617



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 226/509 (44%), Gaps = 20/509 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ L+  LC S + ++ A+     ++ + L       Y  LI+ L +S +  EA  L   
Sbjct: 282 YNVLIAGLCRSGA-VEEAFGFKKDMEDYGLVPD-GFTYGALINGLCKSRRSNEAKALLDE 339

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L P  + Y  LI    R  + ++A  ++ +M   G   + I Y  +++ L +  +
Sbjct: 340 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 399

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D + L  L K++  D    D    N +I G  +      A R L   +  G+SP   TY
Sbjct: 400 MDRASL--LLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY 457

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + +I  L  SG   +A  + EE+   GLKP    Y  L+ GY + G +  A  +  +M +
Sbjct: 458 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 517

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             VLPD + Y+ LI   +  GR E +     +M+     PN F YS ++ GY   G+ + 
Sbjct: 518 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 577

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             Q+++ M  +G++P+   Y  +++++ K + +    + F  ML +G+  D   +  LI 
Sbjct: 578 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 637

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  + A  +   +++ G  P    Y+ +I+ L +    E    +L  M  +G+ P
Sbjct: 638 NLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 697

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N+V Y  L+D   +SG               A N F  +   GL P+ +   SLI+   +
Sbjct: 698 NIVCYNALIDGLCKSGDI-----------SYARNVFNSILAKGLVPNCVTYTSLIDGSCK 746

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
               + AF +   M   G+ PD   Y+ L
Sbjct: 747 VGDISNAFYLYNEMLATGITPDAFVYSVL 775



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 168/383 (43%), Gaps = 54/383 (14%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK---MGYL-KDAEF 356
           A    ++     SGR  +A  V   +++ G+ P  +  NALLK  ++   M  L K  EF
Sbjct: 175 AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREF 234

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +V     +G+ PD +TYS LI+AY     +++A+ VL EM       N+  Y+ ++AG  
Sbjct: 235 MVG----AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM---------- 466
             G  +  F   K+M+  G+ PD   Y  +I+   K    + A A  D M          
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 350

Query: 467 -------------------------LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                                    ++ G++P+ IT++ L+    K G+ DRA  L ++M
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
               + P T TYN++I         +D  RLL  M   G+ PNV TY+ ++    QSG  
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 470

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           + A + LE            M T GLKP+      LI+ +  +   + A  +   M +  
Sbjct: 471 EKASDLLEE-----------MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519

Query: 622 LKPDVVTYTTLMKALIRVDKFHK 644
           + PD+  Y +L+  L +V +  +
Sbjct: 520 VLPDLYCYNSLIFGLSKVGRVEE 542



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 207/476 (43%), Gaps = 47/476 (9%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+++I    R     +AF LLS+ +   ++P   TY+ +I    ++ + EKA +L+ +
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   +   Y+ +I    R   +  SL  +++ ++    +  D    N +I G +K 
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNV--SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   ++ ++    Q  GL P   TY+ +I     +G    AE + + + ++GLKP    Y
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 597

Query: 339 NALLKGYVKM-----------------------------------GYLKDAEFVVSEMER 363
             LL+ Y K                                    G ++ A  V+S +E+
Sbjct: 598 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK 657

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G +PD H YS LI         E A  +L EM      PN   Y+ ++ G    G+   
Sbjct: 658 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 717

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V   + + G+ P+   Y  +ID   K   + +A   ++ ML+ GI PD   ++ L  
Sbjct: 718 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 777

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  ++A  L EEM  RG+    +++N +++   ++ + ++  +LL  +  +GL+P
Sbjct: 778 GCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVP 836

Query: 544 NVVTYTTLVDIYGQSGRFDDA----IECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           N +T   ++    ++G+  +     +E  +  S+ A   F  +  D +    + L+
Sbjct: 837 NALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 892



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 180/433 (41%), Gaps = 63/433 (14%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMS 217
           E  YS LIH   ++  L  A  L QR   T L      Y  L+ +  ++DD+EK  +   
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 618

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   Y ++I +L+ +  ++++   ++   IE +    D  + + +I G  K
Sbjct: 619 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAF--RVLSGIEKNGSVPDVHVYSSLISGLCK 676

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             D  KA   L      G+ P    Y A+I  L  SG    A  VF  +   GL P    
Sbjct: 677 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 736

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G  K+G + +A ++ +EM  +G+ PD   YS+L    ++AG  E A  +++EM 
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 796

Query: 398 V-SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKY 453
           +  HA  +SF  + ++ G+  RG+ Q T ++L  +   G+ P+      +I      GK 
Sbjct: 797 LRGHASISSF--NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854

Query: 454 NCLH----------------HAMAAFDRMLSEGIEP------------------------ 473
           + +H                H  + F  M+++G  P                        
Sbjct: 855 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 914

Query: 474 DTI----------TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           D I          ++  ++D   + G+   A  L +EM +RG  P      I++  L   
Sbjct: 915 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTS 974

Query: 524 ERWEDVKRLLGNM 536
              ++   +L NM
Sbjct: 975 GYIQEHNTVLDNM 987



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 24/203 (11%)

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +A+  R LS+         + L+D + K GR   A E+   M++RG  P     N ++  
Sbjct: 159 LASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKD 218

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
           L   +    + ++   M   G+ P+V TY+TL++ Y +   FD A +             
Sbjct: 219 LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 278

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G  ++A    + M   GL P      +LIN   + +R  EA A+L 
Sbjct: 279 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M    LKP+VV Y  L+   +R
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMR 361



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 75/362 (20%), Positives = 141/362 (38%), Gaps = 63/362 (17%)

Query: 165 LYSILIHALGRSEKLYEAF-LLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKM 219
           +Y ILIH L  S  +  AF +LS  ++   +     Y++LIS   +  D EKA  ++ +M
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   + + Y+ +I  L ++  I  S  + ++  I    +  +      +I G  K G
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDI--SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D S A          G++P    Y+ + T  S++G   +A  + EE+   G      ++N
Sbjct: 749 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFN 807

Query: 340 ALLKGYVKMGYLKDA-------------------EFVVSEMERSGVLPDEHTY------- 373
            L+ G+ K G +++                    E ++S +  +G L + HT        
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867

Query: 374 ----------SLLIDA-----------------YANAGRWESARIVLKEMEVSHAKP-NS 405
                     SL +D                  +   G  + A ++L+++ V+ + P   
Sbjct: 868 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKA-LMLRDVIVAKSAPMGC 926

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y  I+     +G+      +LKEM   G+ P  +   +++        +       D 
Sbjct: 927 SSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDN 986

Query: 466 ML 467
           ML
Sbjct: 987 ML 988



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/361 (19%), Positives = 134/361 (37%), Gaps = 96/361 (26%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           ++  L+ NL SS+ +++ A+ V+S ++K+       + YS LI  L ++    +AF +  
Sbjct: 631 IYGILIHNL-SSSGNMEAAFRVLSGIEKNGSVPDVHV-YSSLISGLCKTADREKAFGILD 688

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              ++ + P  + YNALI    ++ D+  A N+ + +   G   + + Y+ +I    +  
Sbjct: 689 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748

Query: 243 KIDSSLLQKLYKEIECDKIELD--------------GQL--------------------L 268
            I ++    LY E+    I  D              G L                     
Sbjct: 749 DISNAFY--LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSF 806

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF----- 323
           N+++ GF K G   + ++ L +  G GL P   T   +I+ LS +G+  E   +F     
Sbjct: 807 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 866

Query: 324 ---------------------------------EELKESGLKPR---------------T 335
                                            +  KE  L                   
Sbjct: 867 KTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC 926

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            +Y A++    + G L +A  ++ EM++ G+ P E+   +L+     +G  +    VL  
Sbjct: 927 SSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDN 986

Query: 396 M 396
           M
Sbjct: 987 M 987


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 206/434 (47%), Gaps = 21/434 (4%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           + ++++K+ + GY  + I  + +I+ L    +I  +L  + + ++      L+      +
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQAL--QFHDKVVALGFHLNKVSYGTL 183

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  K G  S A++ L    G  + P    Y  +I ++       EA  ++ E+   G+
Sbjct: 184 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 243

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YNAL+ G+  +G +KDA  + ++M    + P+ +T+++L+D +    R + A+ 
Sbjct: 244 SPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKN 303

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           VL  M     KP+ F Y+ ++  Y    E  +   +   +   GV P+ H Y++MI  F 
Sbjct: 304 VLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFC 363

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  AM  F  M    I PD +T+N+LID   K G+   A +L +EM +RG      
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN +++ L +  + +    LL  M+ +G+ P++ TYTTLVD   ++GR +DA    E L
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL 483

Query: 572 SDQA----VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             +     VN +  M               I  F       E+  +L  M+ENG  P+ V
Sbjct: 484 LVKGYILDVNIYTAM---------------IQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 628 TYTTLMKALIRVDK 641
           TY  ++ +L   D+
Sbjct: 529 TYEIIICSLFDKDE 542



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 198/408 (48%), Gaps = 13/408 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           +  ++ SL ++N    S +  L++++E + I  D  +L+ +I  F++ G    +   L  
Sbjct: 75  FGKILGSLVKSNH--YSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAK 132

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
              +G  P   T   +I  L   G+  +A    +++   G      +Y  L+ G  K+G 
Sbjct: 133 ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQ 192

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
              A  ++  ++   V P+   Y+ +ID+         A  +  EM      P+   Y+ 
Sbjct: 193 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNA 252

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++G+   G+ +    +  +M    + P+ + +N+++D F K   L  A      M+ +G
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I+PD  T+N+L+D +      ++A+ +F  + +RG  P   +Y+IMI+   + ++ ++  
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   M    ++P+VVTY +L+D   + G+   A++ ++ + D+           G+   
Sbjct: 373 NLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR-----------GVPHD 421

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  NS+++A  ++ +  +A A+L  MK+ G++PD+ TYTTL+  L +
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 171/382 (44%), Gaps = 7/382 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  +   A  L +R   + + P  + YN +I +  +   + +A +L S+M 
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + Y+ +I       K+  +    L+ ++  + I  +    N ++ GF K   
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDA--TDLFNKMIFENINPNVYTFNILVDGFCKERR 297

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L M    G+ P   TY +++          +A+ +F  + + G+ P   +Y+ 
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+ K+  + +A  +  EM  + ++PD  TY+ LID     G+   A  ++ EM    
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              +   Y+ IL       +  +   +L +MK  G++PD   Y  ++D   K   L  A 
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ +L +G   D   +  +I      G +D + +L  +M+E G  P   TY I+I  L
Sbjct: 478 IVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL 537

Query: 521 GEQERWEDVKRLLGNMRAQGLL 542
            +++  +  ++LL  M  +GL 
Sbjct: 538 FDKDENDKAEKLLREMITRGLF 559



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 164/371 (44%), Gaps = 27/371 (7%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++ +L  S       ++  +++ +G+       + L+  + ++G    +  V
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G  P+  T + LI      G+   A     ++       N   Y  ++ G   
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+     Q+L+ +    V+P+   YN +ID+  K   ++ A   +  M+S+GI PD +T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LI      G+   A +LF +M      P   T+NI+++   ++ R ++ K +L  M 
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------D 573
            QG+ P+V TY +L+D Y      + A      +S                        D
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A+N F+ M  + + P  +  NSLI+   +  + + A  ++  M + G+  D +TY +++
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429

Query: 634 KALIR---VDK 641
            AL +   VDK
Sbjct: 430 DALCKNHQVDK 440



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 180/389 (46%), Gaps = 19/389 (4%)

Query: 129 WHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           + +L+  LC    +++++ L   V   L + N+     ++Y+ +I ++ + + + EAF L
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNV-----VMYNTIIDSMCKVKLVNEAFDL 234

Query: 186 SQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                 + ++P  +TYNALIS       ++ A +L +KM  +  + +   +++++    +
Sbjct: 235 YSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCK 294

Query: 241 TNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
             ++  +  +L  + K+     I+ D    N ++  +    + +KA          G++P
Sbjct: 295 ERRLKEAKNVLAMMMKQ----GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP 350

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              +Y+ +I       +  EA  +F+E+  + + P    YN+L+ G  K+G +  A  +V
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM   GV  D+ TY+ ++DA     + + A  +L +M+    +P+   Y+ ++ G    
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  +    V +++   G   D + Y  MI  F  +     ++    +M   G  P+ +T+
Sbjct: 471 GRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTY 530

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             +I   F     D+AE+L  EM  RG F
Sbjct: 531 EIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 139/316 (43%), Gaps = 11/316 (3%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L +   KP    +  +L   VK  +      +  +ME +G+  D    S+LI+ ++  G+
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              +  VL ++     +PN    + ++ G   +G+  +  Q   ++ + G   +   Y  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K      A+    R+  + ++P+ + +NT+ID   K    + A +L+ EM  +G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TYN +I+      + +D   L   M  + + PNV T+  LVD +          
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF---------- 292

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C E    +A N   +M   G+KP     NSL++ +   +   +A  +   + + G+ P+
Sbjct: 293 -CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351

Query: 626 VVTYTTLMKALIRVDK 641
           + +Y+ ++    ++ K
Sbjct: 352 IHSYSIMIHGFCKIKK 367



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 40/70 (57%)

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            V+  R M  +G+    + L+ LIN F +  ++  +F+VL  + + G +P+V+T TTL+K
Sbjct: 91  VVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIK 150

Query: 635 ALIRVDKFHK 644
            L    + H+
Sbjct: 151 GLCLKGQIHQ 160


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 175/337 (51%), Gaps = 11/337 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            ATY  +I    +SG+  E E +FEE+ E G+K     Y  ++    K+G  K A  +  
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           E+   G++ + HTY  LID    AG  E+A I++ EM+      N  IY+ ++ GY  RG
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                F+V   M+  G E D +  N + D   K N    A      M+ +G+ P+ +++ 
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID + K G +  A++LF+EM++ G  P   TYN++I+   ++ R ++   L   MRA+
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+ P++ TYT+L  ++G         EC+ G  D AV  F  +R  GL  + +   ++I+
Sbjct: 241 GIFPDIYTYTSL--LHG---------ECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIIS 289

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              ++ R  EAF +   M E GL PD   YT+L+ +L
Sbjct: 290 GLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSL 326



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 158/325 (48%), Gaps = 8/325 (2%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           Y+L+I     + KID   ++++++E+ C+K I+ D  +   VI    K G+  +A     
Sbjct: 4   YTLLIDWHGSSGKIDE--VERMFEEM-CEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                GL     TY A+I  +  +G    AE +  E++  GL      YN L+ GY K G
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + +A  V   ME+ G   D +T + + D      + E A+  L  M      PN   Y+
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++  Y   G +    ++ +EMK +G EP+   YNV+ID   K   +  A    D M ++
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240

Query: 470 GIEPDTITWNTLIDCHFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           GI PD  T+ +L+  H +C  G+ D A ELF E++++G      TY  +I+ L ++ R E
Sbjct: 241 GIFPDIYTYTSLL--HGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSE 298

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLV 552
           +  +L   M   GL P+   YT+LV
Sbjct: 299 EAFKLYDEMTEAGLTPDDRVYTSLV 323



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 46/313 (14%)

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+LLID + ++G+ +    + +EM     K +  +Y+ ++      G  +R F +  E+
Sbjct: 3   TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+  + H Y  +ID   K   +  A    + M + G++ + + +NTLID + K G  
Sbjct: 63  TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A ++   M+++G+     T N + + L +  + E+ KR L  M  +G++PNVV+YTTL
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTL 182

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +DIY           C EG   +A   F+ M+  G +P+ +  N LI+   +  R  EA+
Sbjct: 183 IDIY-----------CKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAY 231

Query: 612 AVLQYMKENGLKPD-----------------------------------VVTYTTLMKAL 636
            +   M+  G+ PD                                   VVTYT ++  L
Sbjct: 232 ELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGL 291

Query: 637 IRVDKFHKVFSSY 649
            +  +  + F  Y
Sbjct: 292 SKEGRSEEAFKLY 304



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 7/293 (2%)

Query: 165 LYSILIH---ALGRSEKLYEAF-LLSQRQRLTPL-TYNALISACARNDDLEKALNLMSKM 219
           +Y+++I+    +G +++ +  F  L+++  +  + TY ALI    +  ++E A  L+++M
Sbjct: 38  VYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEM 97

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G   + + Y+ +I    +   ID +   K+   +E    E D   LN +  G  K  
Sbjct: 98  QTRGLDVNQLIYNTLIDGYCKRGLIDEAF--KVQVIMEKKGFENDIYTLNTIADGLRKLN 155

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A R+L      G+ P   +Y  +I      G  +EA+ +F+E+K++G +P    YN
Sbjct: 156 QPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYN 215

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+ K G +K+A  +  EM   G+ PD +TY+ L+      G+ + A  +  E+   
Sbjct: 216 VLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQK 275

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
               N   Y+ I++G    G  +  F++  EM  +G+ PD   Y  ++ +  K
Sbjct: 276 GLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 136/305 (44%), Gaps = 19/305 (6%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           +T ++N+  +  N++ A AL            +L E         + +L+  +C +   +
Sbjct: 39  YTVVINWNCKIGNTKRAFALFD----------ELTEKGLVANVHTYGALIDGVCKA-GEM 87

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTY--NA 198
           + A  +V+ +Q   L  + +L+Y+ LI    +   + EAF   ++ +++      Y  N 
Sbjct: 88  EAAEILVNEMQTRGLDVN-QLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNT 146

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +     + +  E+A   +  M + G   + ++Y+ +I    +      +  +KL++E++ 
Sbjct: 147 IADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEA--KKLFQEMKK 204

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
              E +    N +I G +K G   +A       +  G+ P   TY +++      G+  +
Sbjct: 205 AGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDD 264

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +F E+++ GL      Y A++ G  K G  ++A  +  EM  +G+ PD+  Y+ L+ 
Sbjct: 265 AVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVS 324

Query: 379 AYANA 383
           +   A
Sbjct: 325 SLHKA 329


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 230/530 (43%), Gaps = 33/530 (6%)

Query: 138 SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLT 192
           S  S +++  A+VS +  +  C +  L++ +LI    ++ KL E       L S+   ++
Sbjct: 25  SGVSRVEVVEALVSSMCGN--CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVS 82

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
               N+L+    + D +E A  +  ++ + G   +    ++++ +L +  K D   ++  
Sbjct: 83  INACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDD--VKSF 140

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E+E + I  D    N +I  + + G   +A   +      GL P   TY A+I  L  
Sbjct: 141 LSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCK 200

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR   A+ +  E+   GL P T  YN LL    +     +A+ +  EM R GV+PD  +
Sbjct: 201 KGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 260

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           +S LI  ++     + A +  ++M+     P++ IY+ ++ GY   G      ++  EM 
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G   D   YN +++   K   L  A   FD M+  G  PD  T+ TLI  H + G   
Sbjct: 321 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 380

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A  LF  M +R   P    YN +I+   +    E    L   M ++ + PN +TY  L+
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           + Y   G   +A                          C  G S +A      M   G+ 
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P +++ N+LIN F  +    +AF  +  M++ GL PD++TY  +M    R
Sbjct: 501 PDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 214/477 (44%), Gaps = 20/477 (4%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEK 211
           N  Y+  + Y+ LI A  R   L EAF +      + L P   TYNA+I+   +     +
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206

Query: 212 ALNLMSKMRQDGYHCDFINY-SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           A  ++ +M   G   D   Y +L+++S  R N  ++   ++++ E+    +  D    + 
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA---KEIFGEMLRQGVVPDLVSFSS 263

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I  F++     +A+ +    +  GL P    Y  ++     +G  +EA  + +E+ E G
Sbjct: 264 LIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
                 AYN +L G  K   L DA+ +  EM   G LPD +T++ LI  +   G    A 
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +   M   + KP+   Y+ ++ G+   GE ++  ++   M S  + P+   Y ++I+ +
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                +  A   +D M+ +GI+P  +T NT+I  + + G   +A+E    M  +G  P  
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +YN +IN    ++  +     +  M  +GLLP+++TY  +++ + + GR  +A   L  
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL-- 561

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                    R M   G+ P      +LIN         EAF     M + G  PD V
Sbjct: 562 ---------RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 43/360 (11%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
            VP  +  S L  + S N  +D A      ++K  L     ++Y++L+H   R+  + EA
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD-NVIYTVLMHGYCRNGNMLEA 312

Query: 183 F-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
                 +L Q   L  + YN +++   +   L  A  L  +M + G   DF  ++ +I  
Sbjct: 313 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             +   +  +L   L+  +    I+ D    N +I GF K G+  KA           + 
Sbjct: 373 HCQDGNMTKAL--SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF 430

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP-----------------RTKA--- 337
           P   TY  +I A  + G   EA  +++ + E G+KP                  +KA   
Sbjct: 431 PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490

Query: 338 ---------------YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
                          YN L+ G+V+   +  A   +++ME+ G+LPD  TY+++++ +  
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            GR + A +VL++M      P+   Y+ ++ G+  +      F+   EM   G  PD  F
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 11/200 (5%)

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           ++++I T+ +   L     AF  + S+G        N+L+    K    + A E+  E+ 
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G      T NIM+N L +  +++DVK  L  M   G+  ++VTY TL+  Y + G  +
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A E +  ++D+           GLKPS    N++IN   +  R A A  +L  M   GL
Sbjct: 171 EAFEIMNSMADK-----------GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGL 219

Query: 623 KPDVVTYTTLMKALIRVDKF 642
            PD  TY TL+    R D F
Sbjct: 220 SPDTTTYNTLLVESCRRDNF 239


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 219/466 (46%), Gaps = 32/466 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           + N LI+   R + ++ +++++ KM + G H D I ++ +I  L    KI  ++  +L+ 
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV--ELFN 187

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+     E +      VI G  K G+ S A+      +  G  P   TY+ +I +L    
Sbjct: 188 EMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR 247

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A     E+ E G+ P    YN+++ G+  +G L +A  +  EM    V+P+  T++
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFT 307

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEM 431
           +L+D     G    AR+V + M     +P+   Y+ ++ GY   R   E ++ F++   M
Sbjct: 308 ILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI---M 364

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G  P  H YN++I+ + K   +  A +    M  + + PDT+T++TL+    + GR 
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  LF+EM   G  P   TY I+++   +    ++  +LL +M+ + L PN+V YT L
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTIL 484

Query: 552 VDIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGL 587
           ++    +G+ + A E                          EGLSD+A + FR M  DG 
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            P++ + N +I  F ++Q  + A  ++  M       ++ T+  L+
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 209/443 (47%), Gaps = 9/443 (2%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           L+  LC  N  +D + +V+  + K  + +   + ++ LI+ L    K+ EA      ++ 
Sbjct: 134 LINCLCRLNH-VDFSVSVLGKMFKLGI-HPDAITFNALINGLCNEGKIKEAVELFNEMVK 191

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +      ++Y  +I+   +  +   A+++  KM Q+G   + + YS +I SL +   ++ 
Sbjct: 192 RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++  +   E+    I  +    N ++ GF   G  ++A R      G  + P T T+  +
Sbjct: 252 AM--EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L   G   EA  VFE + E G++P    YNAL+ GY     + +A+ V   M R G 
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P  H+Y++LI+ Y  + R + A+ +L EM      P++  YS ++ G    G  +    
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + KEM S G  P+   Y +++D F K+  L  A+     M  + +EP+ + +  LI+  F
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+ + A+ELF ++   G  P   TY +MI  L ++   ++   L   M   G LPN  
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 549

Query: 547 TYTTLVDIYGQSGRFDDAIECLE 569
           +Y  ++  + Q+     AI  ++
Sbjct: 550 SYNVMIQGFLQNQDSSTAIRLID 572



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 183/375 (48%), Gaps = 11/375 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           LN +I    +      ++  LG    +G+ P   T+ A+I  L N G+  EA  +F E+ 
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           + G +P   +Y  ++ G  K G    A  V  +ME++G  P+  TYS +ID+        
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A   L EM      PN F Y+ I+ G+ + G+     ++ KEM    V P+T  + +++
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K   +  A   F+ M  +G+EPD  T+N L+D +      + A+++FE M  +G  
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   +YNI+IN   +  R ++ K LL  M  + L P+ VTY+TL+    Q GR       
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR------- 423

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +A+N F+ M + G  P+ +    L++ F +     EA  +L+ MKE  L+P++V
Sbjct: 424 ----PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIV 479

Query: 628 TYTTLMKALIRVDKF 642
            YT L++ +    K 
Sbjct: 480 HYTILIEGMFIAGKL 494



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           + N LI+C  +    D +  +  +M + G  P   T+N +IN L  + + ++   L   M
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM 189

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +G  PNV++YTT+++             C  G +  AV+ F+ M  +G KP+ +  ++
Sbjct: 190 VKRGHEPNVISYTTVINGL-----------CKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +I++  +D+   +A   L  M E G+ P+V TY +++     + + ++
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNE 286


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 215/488 (44%), Gaps = 23/488 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP-------LTYNALISACARNDDLEKALNLMSK 218
           Y+ L+ +  R  ++ +A  L +     P       +TYN +I+  AR  +LEKA  L+ +
Sbjct: 234 YNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR 293

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR       F    L+     R +   +  LQ    E+E + I       N +I G  ++
Sbjct: 294 MRMSKKASAFTFNPLITGYFARGSVEKAGALQL---EMENEGIVPTVVTYNTIIHGMFRS 350

Query: 279 GDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           G+   A M+F+ M + +GL P   TY ++I     +G   EA  +F +LK +GL P    
Sbjct: 351 GNVEAARMKFVEM-RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLT 409

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN LL GY ++G L++A     EM   G  PD  TY++L++           R    EM 
Sbjct: 410 YNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEML 469

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P+ F Y+  ++     G     FQ+ + M S G+  DT  YN+ +D   K   L 
Sbjct: 470 SKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLK 529

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   + +M+S+G++PD IT+  LI  H + GR   A ++F+ M   G  P   TY + I
Sbjct: 530 DAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +    +            M  +G+ PN VTY  L+    + GR           ++ A  
Sbjct: 590 HAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGR-----------TNLAYQ 638

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M   GL P+      LI+   ++    EA  +   M ++G+ PD  T+  L K   
Sbjct: 639 HFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFD 698

Query: 638 RVDKFHKV 645
                H +
Sbjct: 699 EGQSKHAI 706



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 199/442 (45%), Gaps = 16/442 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKM--RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           +TYN L+ +  R   +++A  L+ +M  R  G     + Y++VI  L R  +++ +   +
Sbjct: 232 VTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKA--AQ 289

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L   +   K +      N +I G+   G   KA       +  G+ P   TY  +I  + 
Sbjct: 290 LVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMF 348

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG    A   F E++  GL P    YN+L+ GY K G LK+A ++  +++R+G+ P   
Sbjct: 349 RSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVL 408

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++L+D Y   G  E AR   +EM     +P+   Y+ ++ G R         +   EM
Sbjct: 409 TYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G++PD   YN  I           A    + M+S GI  DT+T+N  +D   K G  
Sbjct: 469 LSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNL 528

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  L+ +M   G  P   TY  +I+   E+ R  + + +   M   GL P+ VTYT  
Sbjct: 529 KDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVF 588

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C  G    A   F+ M  +G++P+ +  N LI+A     R   A+
Sbjct: 589 IHAY-----------CRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAY 637

Query: 612 AVLQYMKENGLKPDVVTYTTLM 633
                M E GL P+  TYT L+
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLI 659



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 36/466 (7%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
           AR DD+    ++ ++M Q G     + Y+ ++ S  R  ++D +   KL +E+E      
Sbjct: 210 ARWDDMR---SVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQA--AKLLREMEARP--- 261

Query: 264 DGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTA--TYAAVITALSNSGRT 316
            G L +DV     I G A+ G+  KA + +   +   +S K +  T+  +IT     G  
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR---MSKKASAFTFNPLITGYFARGSV 318

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A A+  E++  G+ P    YN ++ G  + G ++ A     EM   G+LPD  TY+ L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+ Y  AG  + A  +  +++ +   P+   Y+ +L GY   G+ +   +  +EM   G 
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +PD   Y ++++   K   L      FD MLS+G++PD   +NT I      G    A +
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L E M  RG    T TYNI ++ L +    +D   L   M + GL P+ +TYT L+  + 
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + GR  +A +  +G           M   GL PS +     I+A+        A+   Q 
Sbjct: 559 ERGRLREARDIFDG-----------MLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQK 607

Query: 617 MKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
           M E G++P+ VTY  L+ AL R+ +       FH++    L  N Y
Sbjct: 608 MLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKY 653



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 204/452 (45%), Gaps = 42/452 (9%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT----PLTYNALISACARNDDLEKALN 214
           C   ++ Y+++I+ L R  +L +A  L  R R++      T+N LI+       +EKA  
Sbjct: 264 CLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGA 323

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           L  +M  +G     + Y+ +I  + R+  ++++ ++  + E+    +  D    N +I G
Sbjct: 324 LQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK--FVEMRAMGLLPDLITYNSLING 381

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI--------------------------- 307
           + KAG+  +A+   G  +  GL+P   TY  ++                           
Sbjct: 382 YCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPD 441

Query: 308 ----TALSNSGRTIEAEAV----FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
               T L N  R +   A+    F+E+   GL+P   AYN  +   + +G   +A  +  
Sbjct: 442 VSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTE 501

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G+  D  TY++ +D    +G  + A ++  +M     +P+   Y+ ++  + +RG
Sbjct: 502 VMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERG 561

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +    +   M  SG+ P    Y V I  + +   L+ A   F +ML EG+ P+ +T+N
Sbjct: 562 RLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYN 621

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    + GR + A + F EM ERG  P   TY ++I+   ++  WE+  RL   M   
Sbjct: 622 VLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQH 681

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           G+ P+  T+  L   + + G+   AI+ +E +
Sbjct: 682 GIHPDHCTHNALFKGFDE-GQSKHAIQYMENV 712



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 31/369 (8%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P       V+ AL +  R  +  +V+ E+ + G++P    YN LL  + + G +  A
Sbjct: 191 GVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQA 250

Query: 355 EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ EME    G LP + TY+++I+  A  G  E A  ++  M +S  K ++F ++ ++
Sbjct: 251 AKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMS-KKASAFTFNPLI 309

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            GY  RG  ++   +  EM++ G+ P    YN +I    +   +  A   F  M + G+ 
Sbjct: 310 TGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLL 369

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+LI+ + K G    A  LF +++  G  P   TYNI+++        E+ +R 
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429

Query: 533 LGNMRAQGLLPNVVTYTTLV--------------------------DIYGQSGRFDDAIE 566
              M  QG  P+V TYT L+                          D +  + R   + E
Sbjct: 430 KQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI--SAE 487

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            + G + +A     VM + G+    +  N  ++   +     +A+ +   M  +GL+PD 
Sbjct: 488 LILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDC 547

Query: 627 VTYTTLMKA 635
           +TYT L+ A
Sbjct: 548 ITYTCLIHA 556



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 103/248 (41%), Gaps = 47/248 (18%)

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            +EM   GV P     N+++             + +  ML  GIEP  +T+NTL+D  F+
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 488 CGRYDRAEELFEEMQER--GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA------- 538
            GR D+A +L  EM+ R  G  P   TYN++IN L  +   E   +L+  MR        
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303

Query: 539 ---------------------------QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
                                      +G++P VVTY T++    +SG            
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV---------- 353

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            + A   F  MR  GL P  +  NSLIN + +     EA  +   +K  GL P V+TY  
Sbjct: 354 -EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNI 412

Query: 632 LMKALIRV 639
           L+    R+
Sbjct: 413 LLDGYCRL 420



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 14/186 (7%)

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           C    +AAF  M   G+ P     N ++       R+D    ++ EM + G  P   TYN
Sbjct: 176 CSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYN 235

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +++    + R +   +LL  M A+  G LP+ VTY  +++   + G  + A        
Sbjct: 236 TLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAA------- 288

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            Q V+  R+ +    K S    N LI  +       +A A+   M+  G+ P VVTY T+
Sbjct: 289 -QLVDRMRMSK----KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTI 343

Query: 633 MKALIR 638
           +  + R
Sbjct: 344 IHGMFR 349



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 147 YAVVSWLQK--HNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNAL 199
           Y+   W QK         E+ Y++LIHAL   GR+   Y+ F     + L+P   TY  L
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           I    +  + E+A+ L S+M Q G H D   ++ + +  
Sbjct: 659 IDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 215/468 (45%), Gaps = 19/468 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+  I  L +  +L  A      L+ Q  +   +TYN LI    +N   ++A   + K+ 
Sbjct: 254 YNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLV 313

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D   Y+ +I    +   +   L +++      +    D      +I G    G+
Sbjct: 314 NEGLEPDSFTYNTLIAGYCKGGMV--QLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A+     A G G+ P    Y  +I  LSN G  +EA  +  E+ E GL P  + +N 
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  KMG + DA+ +V  M   G  PD  T+++LI  Y+   + E+A  +L  M  + 
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ + Y+ +L G     +++   +  K M   G  P+   +N+++++  +Y+ L  A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKAL 551

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT-TYNIMINL 519
              + M ++ + PD +T+ TLID   K G  D A  LF +M+E     C+T TYNI+I+ 
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHA 611

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             E+      ++L   M  + L P+  TY  +VD + ++G  D   + L           
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFL----------- 660

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             M  +G  PS   L  +IN    + R  EA  ++  M + GL P+ V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 219/479 (45%), Gaps = 18/479 (3%)

Query: 174 GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           GR  K+ EA  + +R        T  +YNA++S    +   ++A  +  +MR  G   D 
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
            ++++ ++S  RT++  ++L  +L   +     E++      V+ GF +     +     
Sbjct: 147 YSFTIRMKSFCRTSRPHAAL--RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELF 204

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G     G+S   +T+  ++  L   G   E E + +++ + G+ P    YN  ++G  + 
Sbjct: 205 GKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQK 264

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L  A  +V  +   G  PD  TY+ LI       +++ A + L ++     +P+SF Y
Sbjct: 265 GELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY 324

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++AGY   G  Q   ++L     +G  PD   Y  +ID        + A+A F+  L 
Sbjct: 325 NTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +GI+P+ I +NTLI      G    A +L  EM E+G  P   T+NI++N L +     D
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L+  M ++G  P++ T+  L+  Y    + ++A+E L+           VM  +G+ 
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD-----------VMMDNGVD 493

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           P     NSL+N   +  +  +     + M E G  P++ T+  L+++L R  K  K   
Sbjct: 494 PDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 207/494 (41%), Gaps = 27/494 (5%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y  +I  LG   K    E  L+  RQ     +    Y   +    R   +++A+N+  +M
Sbjct: 43  YRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM 102

Query: 220 RQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             D Y C+    +Y+ ++  L  +   D +   K+Y  +    I  D       +  F +
Sbjct: 103 --DFYDCEPTVFSYNAIMSILVDSGYFDQA--HKVYMRMRDRGITPDVYSFTIRMKSFCR 158

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                 A+R L      G       Y  V+          E   +F ++  SG+      
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLST 218

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N LL    K G +K+ E ++ ++ + GVLP+  TY+  I      G  ++A  ++  + 
Sbjct: 219 FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLI 278

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   Y+ ++ G     ++Q     L ++ + G+EPD+  YN +I  + K   + 
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
            A       +  G  PD  T+ +LID  CH   G  +RA  LF E   +G  P    YN 
Sbjct: 339 LAERILVNAVFNGFVPDEFTYRSLIDGLCHE--GETNRALALFNEALGKGIKPNVILYNT 396

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I  L  Q    +  +L   M  +GL+P V T+  LV+   + G   DA    +GL    
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA----DGL---- 448

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
               +VM + G  P     N LI+ +    +   A  +L  M +NG+ PDV TY +L+  
Sbjct: 449 ---VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505

Query: 636 LIRVDKFHKVFSSY 649
           L +  K+  V  +Y
Sbjct: 506 LCKTSKYEDVMETY 519



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)

Query: 493 RAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR---AQGLLPNVVTY 548
           +A E+F  M +E G+    +TY  +I  LG   ++E ++ +L +MR      +L  V  Y
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGV--Y 79

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
              +  YG+ G+             +AVN F  M     +P+  + N++++   +     
Sbjct: 80  VGAMKNYGRKGKV-----------QEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFD 128

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           +A  V   M++ G+ PDV ++T  MK+  R  + H
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPH 163


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 230/484 (47%), Gaps = 31/484 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + K  EA+ L +RQ+      + + YN +++   +   +E+AL +  +M+
Sbjct: 93  YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 152

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG-----F 275
           +D    +   Y+++I  L R  K++++L      EI  D +E  G   N + V       
Sbjct: 153 RDAVP-NVPTYNILIDMLCREGKLNAAL------EIR-DDMERAGLFPNVLTVNIMIDRL 204

Query: 276 AKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
            KA    +A   F GM   V  +P   T++++I  L   GR  +A +++E++ + G  P 
Sbjct: 205 CKAQKLEEACSIFEGMDDKV-CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 263

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              Y +L++ + K G  +D   +  EM  +G  PD    +  +D    AG  E  R + +
Sbjct: 264 AIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR 323

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           E+      P++  YS ++ G    G    T+++   MK  G   DTH YN +ID F K  
Sbjct: 324 EINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSG 383

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            ++ A    + M  +G  P  +T+ ++ID   K  R D A  LFEE +  G       Y+
Sbjct: 384 KVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYS 443

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I+  G+  R ++   ++  +  +GL PNV T+  L+D   ++   ++A+ C + + D 
Sbjct: 444 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDL 503

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                         P+ +  + LIN     ++  +AF   Q M++ GLKP+ +TYTT++ 
Sbjct: 504 KC-----------PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS 552

Query: 635 ALIR 638
            L +
Sbjct: 553 GLAK 556



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 227/485 (46%), Gaps = 37/485 (7%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS----------LTRTNKIDSSL 248
           L++ C ++  L +A +++  MR+  +   F  Y+++I            L + N++D ++
Sbjct: 16  LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             +L++++E ++        N +I+G+  AG   +A   L   +  G  P    Y  ++T
Sbjct: 76  --ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 133

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L    R  EA  +FEE+K   + P    YN L+    + G L  A  +  +MER+G+ P
Sbjct: 134 CLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 192

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  T +++ID    A + E A  + + M+     PN+  +S ++ G    G     + + 
Sbjct: 193 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 252

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M   G  P    Y  +I +F K          +  M+  G  PD    NT +DC FK 
Sbjct: 253 EKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKA 312

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  ++   LF E+   G+ P   +Y+I+I+ L +     +   L   M+ QG + +   Y
Sbjct: 313 GETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 372

Query: 549 TTLVDIYGQSGRFDDAIECLE-------------------GLS-----DQAVNAFRVMRT 584
             ++D + +SG+ + A + LE                   GL+     D+A   F   ++
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +G+K + +  +SLI+ FG+  R  EA+ +++ + + GL P+V T+  L+ AL++ ++ ++
Sbjct: 433 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 492

Query: 645 VFSSY 649
               +
Sbjct: 493 ALICF 497



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 227/485 (46%), Gaps = 16/485 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQ 221
           LL+  ++    R ++  E F   ++ R  P  Y  N +I         ++A  L+ + + 
Sbjct: 59  LLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 118

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     I Y+ ++  L +  +++ +L  ++++E++ D +  +    N +I    + G  
Sbjct: 119 KGSIPSVIAYNCILTCLGKKRRVEEAL--RIFEEMKRDAVP-NVPTYNILIDMLCREGKL 175

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           + A+      +  GL P   T   +I  L  + +  EA ++FE + +    P    +++L
Sbjct: 176 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 235

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K G + DA  +  +M   G +P    Y+ LI ++   GR E    + KEM  +  
Sbjct: 236 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 295

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+  + +  +      GE ++   + +E+ + G  PD   Y+++I    K    +    
Sbjct: 296 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 355

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M  +G   DT  +N +ID   K G+ ++A +L EEM+ +G+ P   TY  +I+ L 
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 415

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           + +R ++   L    ++ G+  NVV Y++L+D +G+ GR D+A   +E L  +       
Sbjct: 416 KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK------- 468

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               GL P+    N L++A  + +   EA    Q MK+    P+ +TY+ L+  L RV K
Sbjct: 469 ----GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRK 524

Query: 642 FHKVF 646
           F+K F
Sbjct: 525 FNKAF 529



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 226/487 (46%), Gaps = 34/487 (6%)

Query: 123 AVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           AVP  P ++ L+  LC     ++ A  +   +++  L +   L  +I+I  L +++KL E
Sbjct: 155 AVPNVPTYNILIDMLCRE-GKLNAALEIRDDMERAGL-FPNVLTVNIMIDRLCKAQKLEE 212

Query: 182 A---FLLSQRQRLTP--LTYNALISA---CARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           A   F     +  TP  +T+++LI     C R DD   A +L  KM   G+    I Y+ 
Sbjct: 213 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD---AYSLYEKMLDCGHVPGAIVYTS 269

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I+S  +  + +     K+YKE+       D  L+N  +    KAG+  K          
Sbjct: 270 LIRSFFKCGRKEDG--HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINA 327

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P   +Y+ +I  L  +G   E   +F  +KE G    T AYNA++ G+ K G +  
Sbjct: 328 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 387

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ EM+  G  P   TY  +ID  A   R + A ++ +E + +  K N  +YS ++ 
Sbjct: 388 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 447

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+   G     + +++E+   G+ P+ + +N ++D   K   ++ A+  F  M      P
Sbjct: 448 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 507

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + IT++ LI+   +  ++++A   ++EMQ+ G  P T TY  MI+ L +     +   L 
Sbjct: 508 NQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLF 567

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--DQAVNAFRVMRTDGLKPSN 591
              +A G +P+  +Y  ++                EGLS  ++A++A+ +     LK  N
Sbjct: 568 SRFKANGGIPDSASYNAMI----------------EGLSSANKAMDAYALFEETRLKGCN 611

Query: 592 LALNSLI 598
           +   + +
Sbjct: 612 IHTKTCV 618



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 176/369 (47%), Gaps = 7/369 (1%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP-LTY-NALISACARNDDLEKALNLMSK 218
           ++Y+ LI +    GR E  ++ +        +P LT  N  +    +  + EK   L  +
Sbjct: 265 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 324

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +   G+  D  +YS++I  L +    + +   +L+  ++     LD    N VI GF K+
Sbjct: 325 INAHGFIPDARSYSILIHGLVKAGLANETY--ELFYAMKEQGCVLDTHAYNAVIDGFCKS 382

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  +KA + L   +  G  P   TY +VI  L+   R  EA  +FEE K +G+K     Y
Sbjct: 383 GKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVY 442

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+DA   A     A I  + M+ 
Sbjct: 443 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 502

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   YS ++ G     ++ + F   +EM+  G++P+T  Y  MI    K   +  
Sbjct: 503 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 562

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F R  + G  PD+ ++N +I+      +   A  LFEE + +G    T T  ++++
Sbjct: 563 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 622

Query: 519 LLGEQERWE 527
            L + E  E
Sbjct: 623 ALHKAECLE 631



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 12/250 (4%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I  L + ++L EA++L     S   +L  + Y++LI    +   +++A  +M ++ 
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 466

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           Q G   +   ++ ++ +L +  +I+ +L+  +  K+++C   ++   +L   I G  +  
Sbjct: 467 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL---INGLCRVR 523

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA  F    Q +GL P T TY  +I+ L+ +G  +EA  +F   K +G  P + +YN
Sbjct: 524 KFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYN 583

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI---VLKEM 396
           A+++G        DA  +  E    G      T  +L+DA   A   E A I   VLKE 
Sbjct: 584 AMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKET 643

Query: 397 EVSHAKPNSF 406
             S     SF
Sbjct: 644 AKSQHASRSF 653


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 224/482 (46%), Gaps = 27/482 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           E   +I +  L R+ +L E     +R   Q   P  +   +LI    R+    KA  +M 
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +   G   D I Y+++I    ++ +ID +L     + +E   +  D    N ++     
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKAL-----QVLERMSVAPDVVTYNTILRSLCD 221

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +G   +AM  L         P   TY  +I A  N     +A  + +E+++ G KP    
Sbjct: 222 SGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVT 281

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G  K G L +A   ++ M   G  P+  T+++++ +  + GRW  A  +L +M 
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+   ++ ++     +    R   VL++M   G  P++  YN ++  F +   + 
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+   + M+S G  PD +T+NTL+    K G+ D A E+  ++  +G  P   TYN +I
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVI 461

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLSDQ 574
           + L +  + E    LL  MR +GL P+++TY+TL+   G  G+ D+AI+    +EGLS  
Sbjct: 462 DGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS-- 519

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                       +KPS +  N+++    + Q+ + A   L YM E G KP   TYT L++
Sbjct: 520 ------------IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567

Query: 635 AL 636
            +
Sbjct: 568 GI 569



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 208/449 (46%), Gaps = 18/449 (4%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            RN +LE+ L  + +M   G   D I  + +I+   R+ K   +   ++ + +E      
Sbjct: 118 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKA--TRIMEILENSGAVP 175

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ K+G+  KA++ L   + + ++P   TY  ++ +L +SG+  EA  V 
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVL---ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +   +    P    Y  L++       +  A  ++ EM + G  PD  TY++LI+     
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L  M +   +PN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G  P+++++N L+    +  + DRA E  E M  
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 412

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN ++  L +  + +    +L  + ++G  P ++TY T++D   + G+ + 
Sbjct: 413 RGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 472

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A E LE            MR  GLKP  +  ++L+   G + +  EA  +   M+   +K
Sbjct: 473 AAELLEE-----------MRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK 521

Query: 624 PDVVTYTTLMKALIRVDKFHKV--FSSYL 650
           P  VTY  +M  L +  +  +   F +Y+
Sbjct: 522 PSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 160/332 (48%), Gaps = 14/332 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G   E     E +   G  P   A  +L++G+ + G  + A  ++  +E SG +PD
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY++LI  Y  +G  + A  VL+ M V+   P+   Y+ IL    D G+ +   +VL 
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                   PD   Y ++I+     + +  AM   D M  +G +PD +T+N LI+   K G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A +    M   G  P   T+NI++  +    RW D +RLL +M  +G  P+VVT+ 
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++             C + L  +A++    M   G  P++L+ N L++ F ++++   
Sbjct: 354 ILINFL-----------CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A   L+ M   G  PD+VTY TL+ AL +  K
Sbjct: 403 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 434



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 186/411 (45%), Gaps = 17/411 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            ++ E+  AVP  + +++L      +  ID A  V   L++ ++     + Y+ ++ +L 
Sbjct: 165 MEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDV-VTYNTILRSLC 220

Query: 175 RSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            S KL EA  +  RQ      P  +TY  LI A   +  + +A+ L+ +MR+ G   D +
Sbjct: 221 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVV 280

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I  + +  ++D ++  K    +     + +    N ++      G    A R L 
Sbjct: 281 TYNVLINGICKEGRLDEAI--KFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338

Query: 290 MAQGVGLSPKTATYAAVITALSNS---GRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                G SP   T+  +I  L      GR I+   V E++ + G  P + +YN LL G+ 
Sbjct: 339 DMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCMPNSLSYNPLLHGFC 395

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           +   +  A   +  M   G  PD  TY+ L+ A    G+ ++A  +L ++      P   
Sbjct: 396 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLI 455

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G+ +   ++L+EM+  G++PD   Y+ ++   G    +  A+  F  M
Sbjct: 456 TYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               I+P  +T+N ++    K  +  RA +    M E+G  P   TY I+I
Sbjct: 516 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 230/519 (44%), Gaps = 26/519 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           L+K LCS     D A  V + L       +  + Y+ +++   R+ ++ +A  L      
Sbjct: 193 LIKRLCSDGRVSD-AERVFAALGPS----ATVVTYNTMVNGYCRAGRIEDARRLINGMPF 247

Query: 192 TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
            P   T+N LI A      +  AL +   M   G     + YS+++ +  + +    ++ 
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM- 306

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L  E+     E D    N +I      GD  +A+  L      G  P   TY  V+ +
Sbjct: 307 -ALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKS 365

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  S R  E E +  E+  +   P    +N ++    + G +  A  VV  M   G + D
Sbjct: 366 LCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVAD 425

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS ++D   + GR + A  +L  ++    KP++  Y+ +L G     +W+R  +++ 
Sbjct: 426 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMA 485

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFK 487
           EM  S   PD   +N ++ +  +   +  A+   ++M   G  PD +T+N +ID  C+  
Sbjct: 486 EMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           C   D A EL  ++Q  G  P   T+N ++  L   +RWED ++L+ NM      P+ +T
Sbjct: 546 C--IDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           + T++              C +GL  QA+   ++M  +G  P++   + +++A  +  + 
Sbjct: 604 FNTVITSL-----------CQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKA 652

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             A  +L  M  NG  PD++TY T++  L +  K  +  
Sbjct: 653 QAALELLSGMT-NG-TPDLITYNTVISNLTKAGKMEEAL 689



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 218/490 (44%), Gaps = 55/490 (11%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLE 210
           H  C    + YSIL+ A  +     +A  L    R     P  +TYN LI+A     D++
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +ALN++S +   G   D + Y+ V++SL  + +         +KE+E    EL  ++ ++
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSER---------WKEVE----ELLAEMTSN 385

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
                                     +P   T+  ++T+L   G    A  V + + E G
Sbjct: 386 ------------------------NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG 421

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
                  Y+++L G   +G + DA  ++S ++  G  PD   Y+ ++    +  +WE A 
Sbjct: 422 CVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAE 481

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            ++ EM  S   P+   ++ ++A    +G   R  +V+++M  +G  PD   YN +ID  
Sbjct: 482 ELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGL 541

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
              +C+  AM     + S G +PD +T+NTL+       R++ AE+L   M      P  
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDE 601

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            T+N +I  L ++         L  M   G +PN  TY+ +VD   ++G+   A+E L G
Sbjct: 602 LTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSG 661

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           +            T+G  P  +  N++I+   +  +  EA  +L+ M  NGL PD  TY 
Sbjct: 662 M------------TNG-TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYR 708

Query: 631 TLMKALIRVD 640
           +L   + R D
Sbjct: 709 SLAYGVCRED 718



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 203/490 (41%), Gaps = 41/490 (8%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE--- 181
           P  + +++L N   +   +D A  ++S L  H  C    + Y+ ++ +L  SE+  E   
Sbjct: 319 PDIVTYNVLINAMCNEGDVDEALNILSNLPSHG-CKPDAVTYTPVLKSLCGSERWKEVEE 377

Query: 182 --AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             A + S       +T+N ++++  +   +++A+ ++  M + G   D + YS ++  L 
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC 437

Query: 240 RTNKIDSSL---------------------------------LQKLYKEIECDKIELDGQ 266
              ++D ++                                  ++L  E+ C     D  
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N V+    + G   +A+R +      G SP   TY  +I  L N     +A  +  +L
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           +  G KP    +N LLKG   +   +DAE +++ M RS   PDE T++ +I +    G  
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A   LK M  +   PNS  YS ++      G+ Q   ++L  M +    PD   YN +
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +  A+     M+S G+ PDT T+ +L     +    DRA  +   +Q+ G 
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P TT YN ++       R +       +M + G +P+  TY  L++     G  D+A  
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795

Query: 567 CLEGLSDQAV 576
            L  L    V
Sbjct: 796 LLASLCSLGV 805



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 157/340 (46%), Gaps = 19/340 (5%)

Query: 307 ITALSNSGRTIEAEAVFEELKESGLK--PRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           + +L   G   EA  +F+ +   G +  P     N L+K     G + DAE V + +  S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
             +    TY+ +++ Y  AGR E AR ++  M      P++F ++ ++     RG     
Sbjct: 217 ATV---VTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIPDA 270

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             V  +M   G  P    Y++++D   K +    AMA  D M ++G EPD +T+N LI+ 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
               G  D A  +   +   G  P   TY  ++  L   ERW++V+ LL  M +    P+
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            VT+ T+V    Q G  D AIE ++ +S+    A  V             +S+++   + 
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIV-----------TYSSILDGLCDV 439

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            R  +A  +L  +K  G KPD + YTT++K L   +++ +
Sbjct: 440 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWER 479



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 21/239 (8%)

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVE--PDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           R L     RGE      +   M S G    P     N++I    K  C    ++  +R+ 
Sbjct: 155 RRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILI----KRLCSDGRVSDAERVF 210

Query: 468 SE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +  G     +T+NT+++ + + GR + A  L   M    + P T T+N +I  L  + R 
Sbjct: 211 AALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRI 267

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            D   +  +M  +G  P+VVTY+ L+D             C E    QA+     MR  G
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDA-----------TCKESGYRQAMALLDEMRAKG 316

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            +P  +  N LINA   +    EA  +L  +  +G KPD VTYT ++K+L   +++ +V
Sbjct: 317 CEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEV 375



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 65/161 (40%), Gaps = 19/161 (11%)

Query: 489 GRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           G  D A  LF+ M   G    P     NI+I  L    R  D +R+     A G    VV
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFA---ALGPSATVV 220

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY T+V+ Y ++GR +DA   + G+                 P     N LI A     R
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMP--------------FPPDTFTFNPLIRALCVRGR 266

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             +A AV   M   G  P VVTY+ L+ A  +   + +  +
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 216/489 (44%), Gaps = 26/489 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTPLTYNALISACA--RNDDLEKALNLMSKMR 220
           Y++++  L R++   +A LL +R    R+ P T+   ++A A  R      AL L+  M 
Sbjct: 145 YNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMA 204

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D + Y  VI +L     +  + +  L  E+       D    ND+++G    G 
Sbjct: 205 RHGCVPDAVLYQTVIHALVAQGGVAEAAM--LLDEMLLMGCAADVNTFNDLVLGLCGLGR 262

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A R +      G  P   TY  ++  L  + +  EA A+   L E  +       N 
Sbjct: 263 VREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV----MLNT 318

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +++G +  G L  A  +   M   G  PD HTYS+L+      GR+ SA  +L EME   
Sbjct: 319 VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS +L  +   G W     +L +M + G   ++  YN +I    K   L  A 
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGR--YDRAEELFEEMQERGYFPCTTTYNIMIN 518
                M S+G +PD  T+NT+I  +  C     + AE +F  + E G      TYN +I+
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMI--YHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIH 496

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    RW++  RL   M   G   +V++Y  L+              C EG  D+++  
Sbjct: 497 ALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL-----------CKEGNVDRSMAL 545

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M T G+KP+N + N LIN   +  +  +A  + + M   GL PD+VTY TL+  L +
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605

Query: 639 VDKFHKVFS 647
           V   H   +
Sbjct: 606 VGWTHAALN 614



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 198/473 (41%), Gaps = 52/473 (10%)

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP 193
           + LC    + D A A++  + +H  C    +LY  +IHAL     + EA +L     L  
Sbjct: 185 RALCRLGRAGD-ALALLRGMARHG-CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 194 L-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--S 246
                 T+N L+        + +A  L+ +M   G     + Y  ++Q L RT + D   
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++L +L         E++  +LN VI G    G  ++A     M    G  P   TY+ +
Sbjct: 303 AMLGRLP--------EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L   GR   A  + +E++E G  P    Y+ LL  + + G   DA  ++ +M   G 
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGF 414

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP----------------------- 403
             +   Y+ +I A    G+ + A  +++EM+    KP                       
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474

Query: 404 ------------NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
                       N   Y+ ++      G WQ   ++  EM   G + D   YN +I    
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALC 534

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  +MA  + M+++GI+P+  ++N LI+   K G+   A EL +EM  +G  P   
Sbjct: 535 KEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 594

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           TYN +IN L +         LL  +  + + P++VTY  L+  + +    DDA
Sbjct: 595 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDA 647


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 210/448 (46%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N LI+       +    ++++K+ + GY  D +  + +I+ L    ++  +L    +
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL--HFH 152

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++     +L+      +I G  K GD   A++ L    G    P    Y+ +I AL   
Sbjct: 153 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKY 212

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  +F E+   G+      Y+ L+ G+   G LK+A  +++EM    + P+ +TY
Sbjct: 213 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+DA    G+ + A+ VL  M  +  KP+   YS ++ GY    E ++   V   M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD H Y ++I+ F K   +  A+  F  M  + + P  +T+++LID   K GR   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +L +EM +RG      TY+ +I+ L +    +    L   M+ QG+ PN  T+T L+D
Sbjct: 393 VWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR  DA E            F+ + T G   +    N +I+   +     EA  +
Sbjct: 453 GLCKGGRLKDAQE-----------VFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           L  M++NG  PD VT+  ++ AL + D+
Sbjct: 502 LSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 200/457 (43%), Gaps = 25/457 (5%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           DD     N M  MR   +    I ++ ++ S  +     +++   L   +E   I+ D  
Sbjct: 41  DDAVSQFNRMLCMR---HTPPIIQFNKILDSFAKMKHYSTAV--SLSHRLELKGIQPDLI 95

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  F   G  +     L      G  P T T   +I  L   G+  +A    ++L
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G +    +Y  L+ G  K+G  + A  ++ +++     P+   YS +IDA       
Sbjct: 156 LAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLV 215

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  EM V     +   YS ++ G+   G+ +    +L EM    + P+ + YN++
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A +    ML   ++PD IT++TL+D +F      +A+ +F  M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY I+IN   + +  ++   L   M  + ++P +VTY++L+D   +SGR     +
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSN-LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            ++ + D+             +P+N +  +SLI+   ++     A A+   MK+ G++P+
Sbjct: 396 LIDEMHDRG------------QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPN 443

Query: 626 VVTYTTLMKALI---RVDKFHKVFSSYL----FFNIY 655
             T+T L+  L    R+    +VF   L      N+Y
Sbjct: 444 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 147/306 (48%), Gaps = 21/306 (6%)

Query: 351 LKDAEFVVSEMERSGVLPDEHT-----YSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           +++ +  VS+  R  +L   HT     ++ ++D++A    + +A  +   +E+   +P+ 
Sbjct: 37  IQNVDDAVSQFNR--MLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDL 94

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              + ++  +   G+    F VL ++   G  PDT   N +I        +  A+   D+
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           +L++G + + +++ TLI+   K G    A +L +++  R   P    Y+ +I+ L + + 
Sbjct: 155 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQL 214

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
             +   L   M  +G+  +VVTY+TL  IYG          C+EG   +A+     M   
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTL--IYG---------FCIEGKLKEAIGLLNEMVLK 263

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA---LIRVDKF 642
            + P+    N L++A  ++ +  EA +VL  M +  +KPDV+TY+TLM     +  V K 
Sbjct: 264 TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKA 323

Query: 643 HKVFSS 648
             VF++
Sbjct: 324 QHVFNA 329



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 9/262 (3%)

Query: 182  AFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
            A  LS R  L  +     T N LI+       +    ++++K+ + GYH D I ++ +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 237  SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
             L    +++ +L    + ++     +L+      +I G  K GD   A++ L    G   
Sbjct: 1005 GLCLKGQVNKAL--HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 297  SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
             P    Y  +I AL       +A  +F E+   G+      YN L+ G+  +G LK+A  
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 357  VVSEMERSGVLPDEHTYSLLIDAYANAGR--WESARIVLKEMEVSHAKPNSFIYSRILAG 414
            ++++M    + P+  TY++L+DA    G+   + +  +L +ME +  K N+  +  I++ 
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISA 1182

Query: 415  YRDRGEWQRTFQVLKEMKSSGV 436
              ++ E  +  ++L EM + G+
Sbjct: 1183 LFEKDENDKVEKLLHEMIARGL 1204



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 13/252 (5%)

Query: 396  MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
            +E+   +P+ F  + ++  +   G+    F +L ++   G  PDT  +  +I+       
Sbjct: 952  LELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQ 1011

Query: 456  LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
            ++ A+   D++L++G + + +++ TLI+   K G    A +L  ++  R   P    YN 
Sbjct: 1012 VNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNT 1071

Query: 516  MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            +I+ L + +       L   M  +G+  +VVTY TL  IYG          C+ G   +A
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTL--IYG---------FCIVGKLKEA 1120

Query: 576  VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA--EAFAVLQYMKENGLKPDVVTYTTLM 633
            +     M    + P+    N L++A  ++ +D   E+ ++L  M++NG K + VT+  ++
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180

Query: 634  KALIRVDKFHKV 645
             AL   D+  KV
Sbjct: 1181 SALFEKDENDKV 1192



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 114/250 (45%), Gaps = 2/250 (0%)

Query: 295  GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            G+ P   T   +I    + G+     ++  ++ + G  P T  +  L+ G    G +  A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 355  EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                 ++   G   ++ +Y  LI+     G   +A  +L++++    KP+  +Y+ I+  
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 415  YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                    + + +  EM   G+  D   YN +I  F     L  A+   ++M+ + I P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 475  TITWNTLIDCHFKCGR--YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
              T+N L+D   K G+   D +  +  +M++ G      T+ I+I+ L E++  + V++L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 533  LGNMRAQGLL 542
            L  M A+GLL
Sbjct: 1196 LHEMIARGLL 1205



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 2/256 (0%)

Query: 252  LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            L   +E   I+ D   LN +I  F   G  +     L      G  P T T+  +I  L 
Sbjct: 948  LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007

Query: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              G+  +A    ++L   G +    +Y  L+ G  K+G  + A  ++ +++     PD  
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
             Y+ +IDA         A  +  EM V     +   Y+ ++ G+   G+ +    +L +M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 432  KSSGVEPDTHFYNVMIDTFGK--YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                + P+   YN+++D   K   + L  +++   +M   G + + +T+  +I   F+  
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKD 1187

Query: 490  RYDRAEELFEEMQERG 505
              D+ E+L  EM  RG
Sbjct: 1188 ENDKVEKLLHEMIARG 1203



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 459  AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            A++   R+  +GI+PD  T N LI+C    G+      +  ++ +RGY P T T+  +IN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 519  LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             L  + +          + AQG   N V+Y TL++   + G    AI+ L  +  +    
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT-- 1062

Query: 579  FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                     KP  +  N++I+A  + Q  ++A+ +   M   G+  DVVTY TL+     
Sbjct: 1063 ---------KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCI 1113

Query: 639  VDKF 642
            V K 
Sbjct: 1114 VGKL 1117



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 11/165 (6%)

Query: 490  RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             Y  A  L   ++ +G  P   T NI+IN      +      +L  +  +G  P+ +T+T
Sbjct: 941  HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFT 1000

Query: 550  TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            TL++             CL+G  ++A++    +   G + + ++  +LIN   +      
Sbjct: 1001 TLINGL-----------CLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 1049

Query: 610  AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
            A  +L+ +     KPDVV Y T++ AL +     K +  +   N+
Sbjct: 1050 AIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNV 1094



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 9/129 (6%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRS 176
           R  PA +  + SL+  LC  N  +D A A+ + ++   +       ++IL+  L   GR 
Sbjct: 403 RGQPANVITYSSLIDGLCK-NGHLDRAIALFNKMKDQGI-RPNTFTFTILLDGLCKGGRL 460

Query: 177 EKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           +   E F  LL++   L   TYN +I    +   LE+AL ++SKM  +G   D + + ++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEII 520

Query: 235 IQSLTRTNK 243
           I +L + ++
Sbjct: 521 IIALFKKDE 529


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 230/495 (46%), Gaps = 60/495 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    +   + +A+++ S M+  G   +    + ++  L    ++ S+L  KL++
Sbjct: 34  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL--KLFR 91

Query: 255 EIECDKIELDGQLLNDVIVGFAKAG---DA------------------------------ 281
           E++           N ++ GF  AG   DA                              
Sbjct: 92  EMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWEN 151

Query: 282 ------SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
                  +AM F    +  G+ P   +Y  +++ALS+SGR  EA A+F  +  S   P  
Sbjct: 152 KSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDI 208

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ GY K+G   +A+ ++ E+ ++G  P+  TYS++I+ Y    + E A  V  +
Sbjct: 209 MTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 268

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK-YN 454
           M  S+  PN+  ++ ++AG+   G  +   ++  EM+  G +     YN +ID+  K   
Sbjct: 269 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRG 328

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            ++ A+  F+++   G+ P  +T+N+LI       R   A + F+EM+ +   P   TY+
Sbjct: 329 GVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCA-PNVITYS 387

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+I+ L +  R ++  + L +M+A G  P VVTY  L++ + + G    A+         
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL-------- 439

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
               F  M+  G  P+ +  N+LI+   + +R  +   +L +M   G KPDV+TY  L+ 
Sbjct: 440 ---FFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLIS 496

Query: 635 ALI---RVDKFHKVF 646
            L    RV+   ++F
Sbjct: 497 GLCSANRVEDAQRLF 511



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 188/403 (46%), Gaps = 33/403 (8%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G   A    +A+R          +P   TY  +I      G+  +A +VF ++K 
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SGL P     N LL G  ++G +  A  +  EM+    LP   ++++L+  +  AGR   
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGY----RDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           A   L++M  S +   +  Y+ +L G     +     ++  +  KEMK+SGVEPD   Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           +++        +  A A F  M      PD +T+N L+D + K G+   A+ L +E+ + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           GY P   TY+I+IN   + ++ E+   +   M     +PN VT+ TL+  + ++G  +DA
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 565 IE---------C----------LEGLSDQ------AVNAFRVMRTDGLKPSNLALNSLIN 599
           I+         C          ++ L  +      AV+ F  +   GL P+ +  NSLI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            F + +R +EA      M E    P+V+TY+ L+  L +V + 
Sbjct: 358 GFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRM 399



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 11/383 (2%)

Query: 195 TYNALISA-CARN---DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           TYN ++   C  N   + LE+A+    +M+  G   D  +Y +++ +L+ + ++  +   
Sbjct: 139 TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA--H 196

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L+  + C     D    N ++ G+ K G   +A   +      G  P   TY+ +I   
Sbjct: 197 ALFSAMTCSP---DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCY 253

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
               +  EA  VF ++ ES   P    +N L+ G+ K G L+DA  + +EME+ G     
Sbjct: 254 CKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI 313

Query: 371 HTYSLLIDAYANA-GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            TY+ LID+     G   +A  +  ++E +   P    Y+ ++ G+ D        Q   
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFD 373

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM+     P+   Y+++ID   K   +  A    + M + G  P  +T+  LI+   KCG
Sbjct: 374 EMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A   FE+M+  G  P T  +N +I+ L + ER  D  RLL +M A+G  P+V+TY 
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 550 TLVDIYGQSGRFDDAIECLEGLS 572
            L+     + R +DA    +G++
Sbjct: 493 CLISGLCSANRVEDAQRLFDGMA 515



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 18/279 (6%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+    +A + + A  + KE+      PN+  Y+ ++ G+   G+  +   V  +MKSSG
Sbjct: 3   LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+    N ++    +   +  A+  F  M +    P + + N L+   F  GR   A 
Sbjct: 63  LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLG----EQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
              ++M++      T TYN+++  L        R E        M+A G+ P++ +Y  L
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +     SGR  +A      ++                P  +  N L++ + +  +  EA 
Sbjct: 183 LSALSDSGRMAEAHALFSAMT--------------CSPDIMTYNVLMDGYCKIGQTYEAQ 228

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           ++++ + + G +P+V TY+ ++    ++DK  + +  ++
Sbjct: 229 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 267


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 230/487 (47%), Gaps = 18/487 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  L RS K  +A  +        + P  +TYN +I    +  DLE    L  +M 
Sbjct: 19  YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   + + Y++++  L R  ++D +  + L  E+    +  DG   + +  G  + G+
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDET--RVLMDEMASHSMFPDGFTYSILFDGLTRTGE 136

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   +     +   G+     T + ++  L   G+  +AE V E L  +GL P T  YN 
Sbjct: 137 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 196

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY ++  L+ A  +  +M+   + PD  TY+ LI+          A  ++ EME S 
Sbjct: 197 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 256

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++  Y   G+ ++ F VL +M+  G++ D   +  ++  F K   +  A+
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 316

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A  D M+ + + P+   +N++ID + + G  ++A  L E+M+  G      TYN+++  L
Sbjct: 317 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 376

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               + ++ + L+  +R QGL P+VV+Y T++      G  D A+E L     Q +N + 
Sbjct: 377 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL-----QEMNKY- 430

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                G++P+    ++L++A     R  +   + Q M    ++P    Y  ++ A +R +
Sbjct: 431 -----GIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 485

Query: 641 KFHKVFS 647
              KV S
Sbjct: 486 NDSKVAS 492



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 177/378 (46%), Gaps = 25/378 (6%)

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           +R +G ++G    P   +Y  VI  L  SG+  +A  VF+E+ + G+ P    YN ++ G
Sbjct: 2   VRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 60

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           +VK G L+    +  +M   G  P+  TY++L+     AGR +  R+++ EM      P+
Sbjct: 61  HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 120

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            F YS +  G    GE +    +  E    GV    +  +++++   K   +  A    +
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            ++  G+ P T+ +NTLI+ + +      A  +FE+M+ R   P   TYN +IN L + E
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD----------------DAIE-- 566
                + L+  M   G+ P+V T+ TL+D YG +G+ +                D I   
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 567 ------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                 C  G   +AV     M    + P+    NS+I+A+ E     +AF +++ MK +
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 621 GLKPDVVTYTTLMKALIR 638
           G+   +VTY  L+K L R
Sbjct: 361 GVSASIVTYNLLLKGLCR 378



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/447 (23%), Positives = 199/447 (44%), Gaps = 26/447 (5%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D  +Y++VI  L R+ K   +L  K++ E+    +  +    N +I G  K GD     R
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDAL--KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                   G  P   TY  +++ L  +GR  E   + +E+    + P    Y+ L  G  
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G  +    + +E  + GV+   +T S+L++     G+   A  VL+ +  +   P + 
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           IY+ ++ GY    + +  F + ++MKS  + PD   YN +I+   K   +  A      M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G++P   T+NTLID +   G+ ++   +  +MQ++G      ++  ++    +  + 
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV----- 581
            +   +L +M  + + PN   Y +++D Y +SG  + A   +E + +  V+A  V     
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 582 -------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                              +R  GL+P  ++ N++I+A        +A  +LQ M + G+
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +P + TY TL+ AL    + H +   Y
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLY 459



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 159/344 (46%), Gaps = 7/344 (2%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQ 221
           SIL++ L   G+  K  +   +     L P T  YN LI+   +  DL  A  +  +M+ 
Sbjct: 160 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 219

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D I Y+ +I  L +   +  +  + L  E+E   ++   +  N +I  +  AG  
Sbjct: 220 RHIRPDHITYNALINGLCKLEMVTKA--EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K    L   Q  G+     ++ +V+ A   +G+  EA A+ +++    + P  + YN++
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y++ G  + A  +V +M+ SGV     TY+LL+     + + + A  ++  +     
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 397

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P+   Y+ I++   ++G+  +  ++L+EM   G+ P    Y+ ++        +H    
Sbjct: 398 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 457

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            + +ML + +EP +  +  ++D + +C    +   L +EM E+G
Sbjct: 458 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/425 (21%), Positives = 186/425 (43%), Gaps = 12/425 (2%)

Query: 125 PAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEK 178
           P P    ++ LL  LC +   +D    ++  +  H++ +     YSIL   L   G S  
Sbjct: 82  PKPNIVTYNVLLSGLCRA-GRMDETRVLMDEMASHSM-FPDGFTYSILFDGLTRTGESRT 139

Query: 179 LYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           +   F  S ++   L   T + L++   ++  + KA  ++  +   G     + Y+ +I 
Sbjct: 140 MLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLIN 199

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
              +   +  +    ++++++   I  D    N +I G  K    +KA   +   +  G+
Sbjct: 200 GYCQVRDLRGAFC--IFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   T+  +I A   +G+  +   V  ++++ G+K    ++ +++K + K G + +A  
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ +M    V P+   Y+ +IDAY  +G  E A +++++M+ S    +   Y+ +L G  
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
              +     +++  +++ G+ PD   YN +I           A+     M   GI P   
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++TL+      GR    E L+++M  +   P ++ Y IM++     E    V  L   M
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 497

Query: 537 RAQGL 541
             +G+
Sbjct: 498 SEKGI 502



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 13/284 (4%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           + Y+ LI+ L + E + +A    +  ++  + P   T+N LI A      LEK   ++S 
Sbjct: 227 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 286

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           M+Q G   D I++  V+++  +  KI  +   L   +YK++       + Q+ N +I  +
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA-----PNAQVYNSIIDAY 341

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++GD  +A   +   +  G+S    TY  ++  L  S +  EAE +   L+  GL+P  
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            +YN ++      G    A  ++ EM + G+ P   TY  L+ A A+AGR      + ++
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           M   + +P+S IY  ++  Y       +   + KEM   G+  D
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 2/176 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN++I A   + D E+A  L+ KM+  G     + Y+L+++ L R+++ID +  ++L  
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA--EELIY 390

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    +  D    N +I      GD  KA+  L      G+ P   TY  +++AL+++G
Sbjct: 391 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           R  + E +++++    ++P +  Y  ++  YV+         +  EM   G+  D+
Sbjct: 451 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 222/473 (46%), Gaps = 40/473 (8%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           ++S  AR DD+     + ++M Q G     + Y+ ++ S  +  + D   +  L KE+E 
Sbjct: 211 VLSDAARWDDI---CAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDK--VAMLLKEME- 264

Query: 259 DKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTA--TYAAVITALS 311
                 G L NDV     I G A+ GD  +A     M +G+ LS K +  TY  +IT L 
Sbjct: 265 --TRGSGCLPNDVTHNVVITGLARKGDLEEAAE---MVEGMRLSKKASSFTYNPLITGLL 319

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   +A+ +  E++  G+ P    YNA++ G ++ G ++ A+    EM   G+ PD  
Sbjct: 320 AKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVI 379

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L++ Y  AG  + A ++  ++  +   P    Y+ ++ GY   G+ +   ++ +EM
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITWNTLIDCHFKCG 489
              G  PD   Y +++   G +N    AMA   FD MLS+G++PD   +NT I      G
Sbjct: 440 VEQGCLPDVCTYTILMK--GSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLG 497

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
              +A  L E M   G    T TYNI+I+ L +     D K L   M   GL P+ +TYT
Sbjct: 498 AIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYT 557

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+  +           C  GL  +A   F+ M +DGL PS +     I+A+        
Sbjct: 558 CLIHAH-----------CERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
           A+   + M E G++P+ +TY  L+ AL R  +       FH++    L  N Y
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKY 659



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 203/442 (45%), Gaps = 16/442 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           +TYN L+ +  +    +K   L+ +M   G  C  + + +++VI  L R   ++ +   +
Sbjct: 238 VTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEA--AE 295

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + + +   K +      N +I G    G   KA       +  G+ P   TY A+I  L 
Sbjct: 296 MVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG+   A+  F E++  GL+P    YN+LL GY K G LK+A  +  ++  +G+ P   
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++LID Y   G  E AR + +EM      P+   Y+ ++ G  +        +   EM
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G++PD   YN  I        +  A    + M+ EGI  DT+T+N LID   K G  
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNL 534

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A++L  +M   G  P   TY  +I+   E+    + ++   +M + GL P+ VTYT  
Sbjct: 535 NDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVF 594

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C  G    A   FR M  +G++P+ +  N LI+A     R   A+
Sbjct: 595 IHAY-----------CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAY 643

Query: 612 AVLQYMKENGLKPDVVTYTTLM 633
                M E GL P+  TYT L+
Sbjct: 644 RHFHEMLERGLVPNKYTYTLLI 665



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 203/450 (45%), Gaps = 42/450 (9%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP----LTYNALISACARNDDLEKALN 214
           C   ++ ++++I  L R   L EA  + +  RL+      TYN LI+       ++KA +
Sbjct: 270 CLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADD 329

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           L  +M  +G     + Y+ +I  L ++ +++++  Q  + E+    ++ D    N ++ G
Sbjct: 330 LQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA--QVKFVEMRAMGLQPDVITYNSLLNG 387

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG-----RTIEAEAV------- 322
           + KAG   +A+   G  +  GL+P   TY  +I      G     R ++ E V       
Sbjct: 388 YCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 447

Query: 323 -----------------------FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
                                  F+E+   GL+P   AYN  ++  + +G +  A  +  
Sbjct: 448 VCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLRE 507

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G+  D  TY++LID     G    A+ +  +M  +  +P+   Y+ ++  + +RG
Sbjct: 508 VMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERG 567

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +   +  K+M S G+ P    Y V I  + +   L+ A   F +ML EG+EP+ IT+N
Sbjct: 568 LLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 627

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    + GR   A   F EM ERG  P   TY ++I+   ++  WED  R    M   
Sbjct: 628 VLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQN 687

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           G+ P+ +T+  L   + + G  + AIE LE
Sbjct: 688 GIHPDYLTHKALFKGFDE-GHMNHAIEYLE 716



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 168/346 (48%), Gaps = 14/346 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+  LS++ R  +  AV  E+ + G++P    YN LL  ++K G     
Sbjct: 197 GVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKV 256

Query: 355 EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ EME   SG LP++ T++++I   A  G  E A  +++ M +S  K +SF Y+ ++
Sbjct: 257 AMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLS-KKASSFTYNPLI 315

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G   +G  ++   +  EM++ G+ P    YN MI    +   +  A   F  M + G++
Sbjct: 316 TGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQ 375

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+L++ + K G    A  LF +++  G  P   TYNI+I+        E+ +RL
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  QG LP+V TYT L+   G       A+         A   F  M + GL+P   
Sbjct: 436 KEEMVEQGCLPDVCTYTILMK--GSHNACSLAM---------AREFFDEMLSKGLQPDCF 484

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A N+ I A       A+AF + + M   G+  D VTY  L+  L +
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCK 530



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 100/251 (39%), Gaps = 47/251 (18%)

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
                EM S GV PD    N ++             A    ML  GIEP  +T+NTL+D 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 485 HFKCGRYDRAEELFEEMQER--GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA---- 538
             K GR D+   L +EM+ R  G  P   T+N++I  L  +   E+   ++  MR     
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 539 ------------------------------QGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
                                         +G++P VVTY  ++    QSG+        
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQV------- 359

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               + A   F  MR  GL+P  +  NSL+N + +     EA  +   ++  GL P V+T
Sbjct: 360 ----EAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLT 415

Query: 629 YTTLMKALIRV 639
           Y  L+    R+
Sbjct: 416 YNILIDGYCRL 426


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 229/484 (47%), Gaps = 47/484 (9%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +IL++ L    +L E F     +L +      +TYN LI        + +A  L  +M++
Sbjct: 108 NILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK 167

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D + Y  +I+ L  T  I+ +L  KL++E           +LND+          
Sbjct: 168 LGCTPDVVTYGTLIKGLCGTGNINIAL--KLHQE-----------MLNDI---------- 204

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
               R+      +   P   TY  ++  L   GR  EA+ +FEE+K  G+ P   +YN+L
Sbjct: 205 ---SRY-----EINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G+   G  ++++ ++ EM   G+ PD  T+++LID     G+   A+ +L  M  S  
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ ++ G+   G+     ++   M S G EPD   YNV+I+ + K   +  AM 
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 376

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            ++ ML  G  P+ IT+++L+   F  G+ D A++LF  M+  G    + TY I ++ L 
Sbjct: 377 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 436

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           + +   +  +L   +++      +     L+D   ++G+ + A E  E LS++       
Sbjct: 437 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE------- 489

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               G +P+ +    +I+ F  + +  +A  ++Q M+ NG  PD++TY TLM+     +K
Sbjct: 490 ----GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545

Query: 642 FHKV 645
             +V
Sbjct: 546 LEEV 549



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 233/495 (47%), Gaps = 28/495 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEA---FLLSQ 187
           LL  LC+ N   +   A    L++    YS  ++ Y+ LI  L    ++ EA   FL  Q
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRG---YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQD----GYHC--DFINYSLVIQSLT 239
           +   TP  +TY  LI       ++  AL L  +M  D      +C  + I Y++++  L 
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  + D +  ++L++E++   +       N +I GF  AG   ++ R L      GL P 
Sbjct: 227 KVGREDEA--KQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  +I  L   G+ IEA+ +   + ESG+ P    YN+L++G+  +G L  A  +  
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  PD  +Y++LI+ Y+   + E A  +  EM +   +PN   Y  +L G    G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     ++   MK+ G+  +++ Y + +D   K +CL  AM  F  + S   + +    N
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID   K G+ + A ELFE++   G+ P   TY IMI+    + + +    L+  M A 
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  P+++TY TL+  + +S + ++ ++ L  ++ + V+           P  +  + +++
Sbjct: 525 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS-----------PDAITCSIVVD 573

Query: 600 AFGEDQRDAEAFAVL 614
              +D++  E   +L
Sbjct: 574 MLSKDEKYQECLHLL 588



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M  S   P+   ++ +L+G      + + F +  +M+ SG+  D    N++++     N 
Sbjct: 60  MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY-- 513
           L    AAF  +L  G  P+ +T+NTLI       R   A  LF  MQ+ G  P   TY  
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179

Query: 514 ---------NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
                    NI I L   QE   D+ R   N +     PNV+TY  +VD   + GR    
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCK-----PNVITYNIIVDGLCKVGR---- 230

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                   D+A   F  M+T G+ PS ++ NSLI+ F    +  E+  +L  M + GL+P
Sbjct: 231 -------EDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283

Query: 625 DVVTYTTLMKALIRVDK 641
           D+VT+  L+  L +  K
Sbjct: 284 DMVTFNVLIDTLCKEGK 300



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 17/190 (8%)

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           HA+  F  M+     P   ++N L+    K   Y +   L+ +M+  G      T NI++
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L    R  +       +  +G  PN+VTY TL+              C+E    +A  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL-----------CMEHRISEATR 160

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM------KENGLKPDVVTYTT 631
            F  M+  G  P  +   +LI           A  + Q M       E   KP+V+TY  
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220

Query: 632 LMKALIRVDK 641
           ++  L +V +
Sbjct: 221 IVDGLCKVGR 230


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 199/405 (49%), Gaps = 13/405 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S+V+  L ++ ++D +  ++L  ++    + L+    N ++  + +  D  +    L + 
Sbjct: 181 SVVVDGLCKSGRVDDA--RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 238

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+     TY  ++ +LS +    + EA+F E+K + +      Y A++  Y + G +
Sbjct: 239 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 298

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  V+ E   +GV P+E TY +LI+ +   G+ E+A ++L +M+      N  I++ +
Sbjct: 299 RRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 358

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  +G      ++   M+  GVE D + YN +     + N L  A      M+  G+
Sbjct: 359 IDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGV 418

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ +T+ TLI  H K G    A  LF EM E+G  P   TYN+MI+   ++    + +R
Sbjct: 419 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAER 478

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M  +G +P+V TY +LV  +G          C+ G  D A+  F  M+  G +P+ 
Sbjct: 479 FRKEMEKKGFVPDVYTYASLV--HGH---------CVNGKVDVALKLFEEMKQRGTEPNV 527

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +A  +LI+   ++ R   AF +   M + GL PD   Y+ L+ +L
Sbjct: 528 VAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 7/394 (1%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDLEKALNLMSK 218
           L  S+++  L +S ++ +A  LL    R    L  L YN+L+    R  D  +   ++  
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +G       Y++++ SL+    I  S ++ L+ E++ + +  D  L   VI  + +A
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDI--SKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+  +A + L    G G+ P   TY  +I      G+   AE +  +++  G+      +
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ GY + G + DA  + + ME+ GV  D +TY+ L        R + A+ +L  M  
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIE 415

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ +++ +   G+     ++ +EM   G  P    YNVMID + K   +  
Sbjct: 416 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIRE 475

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M  +G  PD  T+ +L+  H   G+ D A +LFEEM++RG  P    Y  +I+
Sbjct: 476 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            L ++ R E   +L  +M   GL+P+   Y+ LV
Sbjct: 536 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 159/399 (39%), Gaps = 87/399 (21%)

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           R LG   G  +SP  A+   V+  L  SGR  +A  + +++   G+      YN+LL  Y
Sbjct: 166 RALGSCPG-SVSPLAAS--VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCY 222

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           V+       + ++  ME  G+     TY++L+D+ + A                      
Sbjct: 223 VRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTA---------------------- 260

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
                     RD  + +  F    EMK++ V  D + Y  +I+ + +   +  A    D 
Sbjct: 261 ----------RDISKVEALFN---EMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDE 307

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN------- 518
            +  G+EP+  T+  LI+   K G+ + AE L  +MQ +G       +N MI+       
Sbjct: 308 CVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGM 367

Query: 519 ----------------------------LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
                                        L    R ++ K LL  M   G++PN VTYTT
Sbjct: 368 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 427

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+ I+           C +G   +A   FR M   G  PS +  N +I+ + +     EA
Sbjct: 428 LISIH-----------CKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
               + M++ G  PDV TY +L+       +VD   K+F
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 515


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 20/480 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKM 219
           LL++++I  L R+ +L  A  +  Q     P   LTY  L+   ++   L  A+ ++ +M
Sbjct: 6   LLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
               +  D    ++V+QSL   +++D +  ++L +E+    +  +    + ++ G  K  
Sbjct: 66  VSARHVPDNTTLTVVVQSLCLGDRVDDA--RELVEEMLHRGMAANAITYSALVDGLCKCE 123

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+  +      G +P   TY ++IT    + R  EA    E++   G  P    Y 
Sbjct: 124 RLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYT 183

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ G+ K   +     ++ E+ R G  PD  TYS +ID    AGR   A  + +EM  +
Sbjct: 184 ALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 243

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P +  Y+ ++ GY   G+     ++L +M      PD   Y  ++  F K   L  A
Sbjct: 244 ---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDA 300

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F +M++  + PD +T+ +L+D     GR + A EL EE+  RG  P   TYN +++ 
Sbjct: 301 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 360

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  +    + L+ + R++G +PN VTY  LV    ++GR D A++ L+ L+ +     
Sbjct: 361 YCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG---- 416

Query: 580 RVMRTDGLKPSNLALNSLI-NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                 G  P+++A+ ++I +A   D R  +A    + M + G  P   T+ T++ AL +
Sbjct: 417 ------GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 176/410 (42%), Gaps = 42/410 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+AL+    + + L++A+ L+  M + G     + Y+ +I    R  ++D +      
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA--HGFM 167

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++  +    D      +I GF K+ D  + +  LG     G +P   TY+ VI  L  +
Sbjct: 168 EQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKA 227

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +A  +FEE+      P    YN+L+ GY + G + +A  ++ +M      PD  TY
Sbjct: 228 GRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTY 284

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+ A+   GR + A  + ++M  +   P+   ++ ++ G    G  +   ++L+E+  
Sbjct: 285 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 344

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI----------- 482
            G  P  + YN ++D + K N +  A        S G  P+T+T+N L+           
Sbjct: 345 RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 404

Query: 483 --------------------------DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
                                     D   + GR D A + +EEM +RGY P   T+  +
Sbjct: 405 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 464

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
           +  L +  + +    LL  M   G  P   T   +V  Y ++G    A E
Sbjct: 465 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADE 514



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 165/384 (42%), Gaps = 22/384 (5%)

Query: 265 GQLLNDVIVG-FAKAGDASKAM---RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           G LL++V++G   +AG    A+   R +  A      P   TY  ++  LS + R  +A 
Sbjct: 4   GTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH----PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            V +E+  +   P       +++       + DA  +V EM   G+  +  TYS L+D  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
               R + A  +++ M      P    Y+ I+ G+            +++M + G  PD 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             Y  +I  F K   +   +     +   G  PD +T++T+ID   K GR   A ++FEE
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M      P   TYN +I         ++  RLLG M      P+VVTYTTL+  + + GR
Sbjct: 240 MS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            DDA E            F+ M  + L P  +   SL++    + R  +A  +L+ +   
Sbjct: 297 LDDAYE-----------LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345

Query: 621 GLKPDVVTYTTLMKALIRVDKFHK 644
           G  P + TY  ++    + ++  K
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRK 369



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 25/321 (7%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P T  +N ++ G  + G L+ A  V  +M  +   PD  TY+ L+   + A R   A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAV 59

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGY--RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
            VL+EM  +   P++   + ++      DR +  R  ++++EM   G+  +   Y+ ++D
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR--ELVEEMLHRGMAANAITYSALVD 117

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A+A  + M   G  P  +T+N++I    +  R D A    E+M   G  P
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHP 177

Query: 509 CTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
              TY  +I   G   +  DV R   LLG +  +G  P++VTY+T++D   ++GR  DA+
Sbjct: 178 DIITYTALI---GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           +  E +S                P+ +  NSLI  +       EA  +L  M ++   PD
Sbjct: 235 DIFEEMS--------------CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280

Query: 626 VVTYTTLMKALIRVDKFHKVF 646
           VVTYTTLM A  ++ +    +
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAY 301



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 11/284 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           ++SL+   C +   +D A  ++  +     C    + Y+ L+ A   +GR +  YE F  
Sbjct: 249 YNSLIGGYCRAGD-MDEAIRLLGKMVDDK-CAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
               +L+P  +T+ +L+        +E AL L+ ++ + G       Y+ V+    + N+
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM--AQGVGLSPKTA 301
           +  +  ++L  +        +    N ++ G  +AG   +A+++L    ++G       A
Sbjct: 367 VRKA--EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 424

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            YA ++ AL   GRT +A   +EE+ + G  P    +  ++    K    + A  ++ EM
Sbjct: 425 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 484

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            + G  P   T   ++ AY  AG  + A  +  E+ +   K +S
Sbjct: 485 IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKSSS 528


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 236/519 (45%), Gaps = 19/519 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           +L+ L   +SSID+A  V + + +  +  +  + Y+ ++ +  +  K+ EA  LL Q Q+
Sbjct: 160 VLRLLRDRDSSIDVAREVYNVMVECGIRPTV-VTYNTMLDSFCKQGKVQEALQLLLQMQK 218

Query: 191 LTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +  L    TYN L++  + + +LE+A  L+ +M + G       Y  +I+      ++D 
Sbjct: 219 MGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDE 278

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   +L +E+            N ++ G  K G  S A + L +     L P   +Y  +
Sbjct: 279 A--SRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I   +  G   EA  +F EL+  GL P    YN L+ G  +MG L  A  +  EM + G 
Sbjct: 337 IYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  T+++L+  +   G    A+ +  EM     +P+ F Y   + G    G+  + F 
Sbjct: 397 DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 456

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + +EM + G  PD   YNV ID   K   L  A     +ML  G+ PD +T+ ++I  H 
Sbjct: 457 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 516

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G   +A  +F EM  +G FP   TY ++I+    + R +        M  +G+ PNV+
Sbjct: 517 MAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 576

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L++   +  +            DQA   F  M+  G+ P+      LIN       
Sbjct: 577 TYNALINGLCKVRKM-----------DQAYKFFTEMQAKGISPNKYTYTILINENCNLGH 625

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             EA  + + M +  ++PD  T++ L+K L +  K H V
Sbjct: 626 WQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVV 664



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 238/548 (43%), Gaps = 66/548 (12%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISAC-------- 203
           W ++       EL Y++++  L R+  +  A+ + ++     +    +            
Sbjct: 70  WAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIY 129

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT-RTNKIDSSLLQKLYK-EIECDKI 261
           A+   LEK L +  KM   G   D  N + V++ L  R + ID +  +++Y   +EC  I
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVA--REVYNVMVECG-I 186

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
                  N ++  F K G   +A++ L   Q +G  P   TY  ++  LS+SG   +A+ 
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +E+   GL+     Y+ L++GY + G L +A  +  EM   G +P   TY+ ++    
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             GR   AR +L  M   +  P+   Y+ ++ GY   G     F +  E++  G+ P   
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF--- 498
            YN +ID   +   L  AM   D M+  G +PD  T+  L+    K G    A+ELF   
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 499 --------------------------------EEMQERGYFPCTTTYNIMINLLGEQERW 526
                                           EEM  RG+ P   TYN+ I+ L +    
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   L+  M   GL+P+ VTYT+++  +  +G    A         +AV  F  M + G
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKA---------RAV--FLEMLSKG 535

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQY--MKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + PS +    LI+++    R     A+L +  M E G+ P+V+TY  L+  L +V K  +
Sbjct: 536 IFPSVVTYTVLIHSYA--VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQ 593

Query: 645 VFSSYLFF 652
              +Y FF
Sbjct: 594 ---AYKFF 598



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 192/472 (40%), Gaps = 57/472 (12%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPL-WHSLL 133
           L L+   Y + PL+    E    + AS L     S             AVP  + +++++
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRG-----------AVPTLVTYNTIM 302

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR--- 190
             LC      D A  ++  +   NL     + Y+ LI+   R   + EAFLL    R   
Sbjct: 303 YGLCKWGRVSD-ARKLLDVMVNKNLMPDL-VSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L P  +TYN LI    R  DL+ A+ L  +M + G   D   ++++++            
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVR------------ 408

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                                    GF K G+   A          GL P    Y   I 
Sbjct: 409 -------------------------GFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIV 443

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G   +A  + EE+   G  P    YN  + G  K+G LK+A  +V +M  +G++P
Sbjct: 444 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVP 503

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ +I A+  AG    AR V  EM      P+   Y+ ++  Y  RG  +      
Sbjct: 504 DHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHF 563

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM   GV P+   YN +I+   K   +  A   F  M ++GI P+  T+  LI+ +   
Sbjct: 564 FEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNL 623

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           G +  A  L+++M +R   P + T++ ++  L +  +   V R L N+ A G
Sbjct: 624 GHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK-SHVVRHLENVIAAG 674


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 223/472 (47%), Gaps = 17/472 (3%)

Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           R+++L+E  + S     + +TYN L+    R   LE+A+ L  +M     H D I+++++
Sbjct: 28  RAQELFE-HMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH-DVISFNIL 85

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +  L R  KI+++L  + +++++ D+   +    + +I G  KA   S+A+  L   +  
Sbjct: 86  VTGLCRAGKIETAL--EFFRKMD-DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 142

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G SP   TY  ++  L    +   A  V  E+ ++G  P    YN+LL G  +   + DA
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             ++ +M   G  P+  TY  LID     GR + A  +L +M      P+  IY+ ++ G
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLING 262

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                +   +  +L+   S G++PD   Y+ +I    + N L  A      + S G  PD
Sbjct: 263 LCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPD 322

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            I ++TLID   K G+ D A +L+E M   G      TY+ +I+ L +  R ++   LL 
Sbjct: 323 VILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G  P+ +TY +L+         D+AIE +E            M      PS +  
Sbjct: 383 RMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE-----------MERSNCAPSAVTY 431

Query: 595 NSLINAFGEDQR-DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           N LI+     +R D+ A    Q M +NG+ PD +TY+ L++ L +    H++
Sbjct: 432 NILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHEL 483



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 211/456 (46%), Gaps = 15/456 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LI    +N++ ++A  L   M+        + Y+ ++  L RT K++ ++   L+
Sbjct: 11  VTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM--ALF 68

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+  D+   D    N ++ G  +AG    A+ F         SP   TY+ +I  L  +
Sbjct: 69  QEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCKA 126

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  +A  + E +K  G  P    Y  L+ G  K   +  A  V+ EM  +G +P+  TY
Sbjct: 127 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 186

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+     A R   A  ++++M      PN   Y  ++ G    G  +    +L +M  
Sbjct: 187 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 246

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  PD   YN++I+   K + +  ++A   R +S GI+PD +T++++I    +  R D 
Sbjct: 247 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 306

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L   ++ RG  P    Y+ +I+ L +  + ++   L   M   G   +VVTY+TL+D
Sbjct: 307 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLID 366

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++GR D+A   L           R++R  G  PS +  NSLI    +     EA  +
Sbjct: 367 GLCKAGRVDEAHLLLA----------RMVRM-GTPPSTMTYNSLIKGLCDLNHLDEAIEL 415

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++ M+ +   P  VTY  L+  + R+++       Y
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDY 451



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 17/357 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P   TY ++I  L  +     A+ +FE +K     P    YN LL G  + G L+ A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 355 EFVVSEM--ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             +  EM   RS    D  ++++L+     AG+ E+A    ++M+     PN   YS ++
Sbjct: 65  MALFQEMLDRRS---HDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLI 120

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G        +  ++L+ MK+ G  PD   Y +++D   K + +  A      ML  G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+ +T+N+L+    +  R   A  L  +M  RG  P   TY  +I+ L +  R +D   +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M  +G  P+++ Y  L++   ++ + D++I  L     +AV+        G+KP  +
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR----RAVSG-------GIKPDVV 289

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +S+I       R  EA  +L Y+K  G  PDV+ Y+TL+  L +  K  + F  Y
Sbjct: 290 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 54/420 (12%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           ++IL+  L R+ K+  A  F      R +P  +TY+ LI    + + + +A+ L+  M+ 
Sbjct: 82  FNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKA 141

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL------NDVIVGF 275
            G   D I Y++++  L + +K+ ++   ++ +E+      LD   +      N ++ G 
Sbjct: 142 RGCSPDVITYTILVDGLCKESKVAAA--WEVLREM------LDAGCVPNLVTYNSLLHGL 193

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +A   S A+  +      G +P   TY  +I  L   GR  +A A+  ++ + G  P  
Sbjct: 194 CRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDL 253

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ G  K   + ++  ++      G+ PD  TYS +I     + R + A  +L  
Sbjct: 254 MIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLY 313

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           ++     P+  +YS ++ G    G+    F + + M   G + D   Y+ +ID   K   
Sbjct: 314 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ------------- 502
           +  A     RM+  G  P T+T+N+LI         D A EL EEM+             
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 433

Query: 503 -----------------------ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
                                  + G  P   TY+I++  L + +   +++ L+ +   Q
Sbjct: 434 LIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 44/245 (17%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+  G EP+   YN +ID   K N    A   F+ M S    P  +T+NTL+D  F+ G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 491 YDRAEELFEEMQERG-------------------------YF--------PCTTTYNIMI 517
            +RA  LF+EM +R                          +F        P   TY+++I
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + L +  R      LL +M+A+G  P+V+TYT LVD             C E     A  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL-----------CKESKVAAAWE 169

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             R M   G  P+ +  NSL++     +R ++A A+++ M   G  P+VVTY TL+  L 
Sbjct: 170 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 229

Query: 638 RVDKF 642
           +V + 
Sbjct: 230 KVGRV 234


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 238/528 (45%), Gaps = 33/528 (6%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           E +Y  ++   GR  K+ EA  + +R        +  +YNA+++         +A  +  
Sbjct: 76  EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M+  G + D   +++ ++S   T +  ++L  +L   +     E +      VI GF K
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAAL--RLLNNMPGQGCEFNAVSYCAVISGFYK 193

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A          G+ P   T+  +I  L   G   E+E +F ++ + G+ P    
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N  ++G  + G + +A  ++  +   G+ PD  +Y+ LI  +    +   A   L +M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            S  +PN F Y+ I+ G+   G  Q   ++L++    G  PD   Y+ +I+       ++
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AMA F   + +G +   I +NTL+    K G   +A +L ++M E G  P   TYN+++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           N L +     D   +L +  A+G +P++ T+ TL+D Y +    D AIE L+        
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 570 -----------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                      GL      D  V+ F+ M   G  P+ +  N LI +F +D++ +EA  +
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
            + MK  GL PD+VT  TL+  L    +  K +   LF  I K   +S
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE--LFVTIEKEYKFS 599



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 230/555 (41%), Gaps = 72/555 (12%)

Query: 118 AESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR-- 175
           A SY AV +  +          N  I+ AY +   + K  +C    L ++ LIH L +  
Sbjct: 181 AVSYCAVISGFY--------KENCQIE-AYHLFDEMLKQGICPDI-LTFNKLIHVLCKKG 230

Query: 176 ----SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
               SEKL+   +   ++ + P   T+N  I    R   +++A  L+  +  +G   D I
Sbjct: 231 NVQESEKLFSKVM---KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +Y+ +I    + +K+  +    L+K +    +E +    N +I GF KAG    A + L 
Sbjct: 288 SYNTLICGFCKHSKLVEAECY-LHKMVN-SGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK----------------- 332
            A   G  P   TY+++I  L N G    A AVF E  E G K                 
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 333 ------------------PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                             P    YN ++ G  KMG L DA  ++++    G +PD  T++
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID Y      + A  +L  M      P+   Y+ +L G     +        K M   
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   YN++I++F K   +  AM  F  M + G+ PD +T  TLI      G  D+A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 495 EELFEEMQERGYFP-CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            ELF  +++   F   T  +NIMIN   E+      ++L   M      P+  TY  ++D
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645

Query: 554 IYGQSGRFDDA-IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            Y ++G  D A    LE +S             GL PS      ++N      R +EA  
Sbjct: 646 SYCKTGNIDLAHTFLLENIS------------KGLVPSFTTCGKVLNCLCVTHRLSEAVV 693

Query: 613 VLQYMKENGLKPDVV 627
           ++  M +NG+ P+ V
Sbjct: 694 IINLMVQNGIVPEEV 708


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 220/492 (44%), Gaps = 19/492 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISA-CARNDDLEKALNLMSKMRQD 222
           Y+ ++    R+ +L  A  L+    + P   TY  ++ A CAR   +  AL ++ +M + 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGR-IADALAVLDEMPRR 188

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G       Y +++++  R     S++  ++ +++      LD    N V+      G   
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAV--RVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A+  L      G  P   +Y AV+  L  + R    + + EE+      P    +N L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               + G  +    V+++M   G  PD   Y+ +ID     G  E A  +L  M     K
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ +L G      W+ T ++L EM       D   +N+++D F +   +   +  
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            ++ML  G  PD IT+ T+I+   K G  D A  L + M   G  P T +Y I++  L  
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
            ERW D + L+  M  QG   N +T+ TL++             C +GL +QA+   + M
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-----------CKKGLVEQAIELLKQM 535

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +G  P  ++ +++I+  G+  +  EA  +L  M   G+ P+ + Y+++  AL R  + 
Sbjct: 536 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595

Query: 643 HKVFSSYLFFNI 654
           +KV    +F NI
Sbjct: 596 NKVIQ--MFDNI 605



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 197/488 (40%), Gaps = 48/488 (9%)

Query: 123 AVPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           AVP P     +  +++ LC+     D A AV+  + +   C     +Y +++ A  R   
Sbjct: 152 AVPVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRG-CAPIPPMYHVILEAACRGGG 209

Query: 179 LYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
              A      L ++   L     N +++A      +++AL+L+  +   G   D ++Y+ 
Sbjct: 210 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 269

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           V++ L    +     +Q+L +E+       +    N +I    + G   +    L     
Sbjct: 270 VLKGLCMAKRW--GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVE 327

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG--------- 344
            G +P    YA +I  +   G    A  +   +   GLKP    YN LLKG         
Sbjct: 328 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 387

Query: 345 --------YVKMGYLKDAEF------------------VVSEMERSGVLPDEHTYSLLID 378
                   + K   L D  F                  ++ +M   G +PD  TY+ +I+
Sbjct: 388 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 447

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +   G  + A ++LK M     KPN+  Y+ +L G      W     ++ +M   G   
Sbjct: 448 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 507

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ D A EL 
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 567

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
             M  +G  P T  Y+ + + L  + R   V ++  N++   +  + V Y  ++    + 
Sbjct: 568 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 627

Query: 559 GRFDDAIE 566
           G  + AIE
Sbjct: 628 GETERAIE 635



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRS---EKLYEA 182
           ++++LK LC +       +  V  L +  +   C    + ++ LI  L R+   E+++E 
Sbjct: 267 YNAVLKGLCMAKR-----WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 321

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                    TP    Y  +I    +   LE A  ++++M   G   + + Y+ +++ L  
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 381

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             + + +  ++L  E+      LD    N ++  F + G   + +  L      G  P  
Sbjct: 382 AERWEET--EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI      G   EA  + + +   G KP T +Y  +LKG        DAE ++S+
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M + G   +  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N 
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 619

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K G  +RA E    M   G  P  +TY I+I  L  +   ++ + +L  + ++G
Sbjct: 620 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679

Query: 541 LL 542
            L
Sbjct: 680 AL 681


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 215/476 (45%), Gaps = 18/476 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L  + ++ EA+ +     L  L     + N ++    + + LE+A  +     
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G + + + Y  +I  L +  KID +   +L++++     + +  +   +I  F   G 
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAY--RLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +        G  P        +  +  +G   +  A+FE++K  G  P  ++Y+ 
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++   +   M + G   D   Y+ ++D    +G+ + A  VL+EM+V H
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P    Y  I+ G          + + +E KS G+E +   Y+ +ID FGK   +  A 
Sbjct: 626 VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+ +G+ P+  TWN+L+D   K    D A   F+ M+E    P T TY+I+IN L
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +++         M+ QGL+PNVVTYTT++    + G   D           A + F 
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITD-----------AYSLFE 794

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +T+G  P + + N+LI       R  EA+ V +  +  G + +V T  +L+ AL
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL 850



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 252/554 (45%), Gaps = 37/554 (6%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHA--LGRSEKLYEA 182
           +L N+C        S+D+A+     L+ H L     SY  +  +L  A  LG +E+L+  
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF-G 305

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + ++R       YN +I      +  + A  L+ ++R+ G     ++++ ++  L +  
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L   L+  ++ D  + +    N +I     AG  ++A +     +  GL P   +
Sbjct: 366 KVDEAL--TLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS 422

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  + +  EA  +FE   E G  P +  Y +L+ G  K G + DA  +  +M 
Sbjct: 423 VNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKML 482

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G   +   Y+ LI  +   GR E    + KEM     +P+  + +  +      GE +
Sbjct: 483 DAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVE 542

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + ++MKS G  PD   Y+++I    K          F  M  +G   D   +N ++
Sbjct: 543 KGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVV 602

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+ D+A E+ EEM+ +   P   TY  +++ L + +R ++   L    +++G+ 
Sbjct: 603 DGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIE 662

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLE-----GLS-------------------DQAVNA 578
            NV+ Y++L+D +G+ GR D+A   LE     GL+                   D+A+  
Sbjct: 663 LNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALIC 722

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M+     P+    + LIN     Q+  +AF   Q M++ GL P+VVTYTT++  L +
Sbjct: 723 FQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAK 782

Query: 639 VDKFHKVFSSYLFF 652
           V      +S +  F
Sbjct: 783 VGNITDAYSLFERF 796



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 236/514 (45%), Gaps = 32/514 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           L++ L+ AL R  ++  A  L    +   L P  + YN  I    +   ++ A     ++
Sbjct: 213 LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL 272

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G   D ++Y+ ++  L +  ++  +  ++L+ ++E ++        N +I+G+  A 
Sbjct: 273 KAHGLRPDDVSYTSMVWVLCKAGRLGEA--EELFGQMEAERDVPCAYAYNTMIMGYGSAE 330

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A + L   +  G  P   ++ +++T L    +  EA  +F+ +K+   KP    YN
Sbjct: 331 RFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYN 389

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++      G + +A  +  EME +G+ P+  + ++++D    A + E A  + +     
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PNS  Y  ++ G   +G+    +++ ++M  +G + +   Y  +I  F  +      
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDG 509

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +  M+  G  PD    NT +DC FK G  ++   +FE+M+  G+ P   +Y+I+I+ 
Sbjct: 510 HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------- 569
           L +  +  +   +   M  QG   +   Y  +VD   +SG+ D A E LE          
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629

Query: 570 ---------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                    GL+     D+A   F   ++ G++ + +  +SLI+ FG+  R  EA+ +L+
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M + GL P+V T+ +LM AL++ ++  +    +
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICF 723



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 227/508 (44%), Gaps = 40/508 (7%)

Query: 183 FLL---SQRQRLTPLTYNALISACARN-DDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           FLL   S  Q L P  YNA++   + +   LEK L  MS +   GY       + ++ +L
Sbjct: 95  FLLASASSSQPLPPDAYNAVLPFLSHDLAALEKVLEEMSHL---GYGLPNPACAALVATL 151

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            R+ +++ +   ++   +   K          +I   A+A    +A+  L   Q VG   
Sbjct: 152 VRSRRLEDAF--RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEV 209

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               +  ++ AL+  G+   A A+ +E+K S L+P    YN  +  + K G +  A    
Sbjct: 210 SVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFF 269

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            E++  G+ PD+ +Y+ ++     AGR   A  +  +ME     P ++ Y+ ++ GY   
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSA 329

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
             +   +++L+ ++  G  P    +N ++   GK   +  A+  FD M  +  +P+  T+
Sbjct: 330 ERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTY 388

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +ID     GR + A ++ +EM+  G FP   + NIM++ L +  + E+  R+  +   
Sbjct: 389 NIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASE 448

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA-------------------- 578
           +G  PN VTY +L+D  G+ G+ DDA    E + D   +A                    
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 579 ----FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
               ++ M   G +P    LN+ ++   +     +  A+ + MK  G  PDV +Y+ L+ 
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 635 ALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            L +  +  +        NI++ +S  G
Sbjct: 569 GLTKAGQARET------SNIFQAMSQQG 590



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 189/443 (42%), Gaps = 49/443 (11%)

Query: 167 SILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           +I++  L ++ +L EA   F  +  +   P  +TY +LI    +   ++ A  L  KM  
Sbjct: 424 NIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD 483

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G+  + I Y+ +I++     + +     K+YKE+       D  LLN  +    KAG+ 
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKEDG--HKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEV 541

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K        +  G  P   +Y+ +I  L+ +G+  E   +F+ + + G     +AYNA+
Sbjct: 542 EKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAV 601

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K G +  A  V+ EM+   V P   TY  ++D  A   R + A ++ +E +    
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGI 661

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV------------------------- 436
           + N  +YS ++ G+   G     + +L+EM   G+                         
Sbjct: 662 ELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALI 721

Query: 437 ----------EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
                      P+T+ Y+++I+   +    + A   +  M  +G+ P+ +T+ T+I    
Sbjct: 722 CFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLA 781

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G    A  LFE  +  G  P + ++N +I  +    R  +  ++    R +G   NV 
Sbjct: 782 KVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVK 841

Query: 547 TYTTLVDIYGQSGRFDDAIECLE 569
           T  +L+D   ++       ECLE
Sbjct: 842 TCISLLDALNKT-------ECLE 857



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 142/309 (45%), Gaps = 8/309 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YSILIH L   G++ +    F    +Q   L    YNA++    ++  ++KA  ++ +M+
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMK 622

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
               H     Y  ++  L + +++D + +  L++E +   IEL+  L + +I GF K G 
Sbjct: 623 VKHVHPTVATYGSIVDGLAKIDRLDEAYM--LFEEAKSKGIELNVILYSSLIDGFGKVGR 680

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L      GL+P   T+ +++ AL  +    EA   F+ +KE    P T  Y+ 
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  ++     A     EM++ G++P+  TY+ +I   A  G    A  + +  + + 
Sbjct: 741 LINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNG 800

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+S  ++ ++ G  +       +QV +E +  G   +      ++D   K  CL  A 
Sbjct: 801 GIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA- 859

Query: 461 AAFDRMLSE 469
           A    +LSE
Sbjct: 860 AIVGAVLSE 868


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 244/539 (45%), Gaps = 18/539 (3%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           R  F+L  + RA P     +     C     +D A  ++  +            Y+++I 
Sbjct: 137 RGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIA 196

Query: 172 ALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            L ++    +A  L      + + P  +TYN +I    +  DLE    L S+M + G   
Sbjct: 197 GLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP 256

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + I Y++++  L R  ++  +    +  E+   K+  DG   + +  G ++ GD+   + 
Sbjct: 257 NVITYNVLLSGLCRAGRMGET--AAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLS 314

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
               +   G+     T + ++  L   G+  +AE V + L  SGL   T  YN L+ GY 
Sbjct: 315 LFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYC 374

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G L+ A  +  +M+   + PD  TY+ LI+      R   A  ++ EME +   P+  
Sbjct: 375 QIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVE 434

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ ++  Y   G+ ++ F +L +M+  G++P+   Y  +++ F K   +  A+A  D M
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM 494

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             + + P    +N +ID + +CG  D+A  L E+M+  G  P   TYN++I  L +Q + 
Sbjct: 495 FIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQI 554

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            + + LL ++R  GL P+V++Y TL+              C    +D+A+   + M   G
Sbjct: 555 SEAEELLDSLRNYGLAPDVISYNTLISAC-----------CYRSNTDRALELEKEMWKCG 603

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +KPS      L ++ G   R  E   + Q M +  + P    Y  ++ A  +  +  KV
Sbjct: 604 IKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKV 662



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 223/506 (44%), Gaps = 35/506 (6%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFIN 230
           GR   +  AF  L++ R R    T+N  + AC    DL++A+ ++ +M  DG    +  +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++VI  L +      ++  KL+ E+    +  +    N +I G  K GD     R    
Sbjct: 191 YNVVIAGLWKAGTDCDAV--KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQ 248

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   TY  +++ L  +GR  E  AV +E+    + P    Y+ L  G+ + G 
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG- 307

Query: 351 LKDAEFVVSEMERS---GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
             D++ ++S  E S   GV    +T S+L++     G+   A  VL+ +  S     + I
Sbjct: 308 --DSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ GY   G+ +  F + ++MKS  + PD   YN +I+  GK   +  A      M 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ P   T+NTLID + + G+ ++   +  +MQE+G  P   +Y  ++N   +  +  
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV------ 581
           +   +L +M  + +LP    Y  ++D Y + G  D A    E +    V    V      
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 582 ------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                             +R  GL P  ++ N+LI+A         A  + + M + G+K
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P   TY  L  +L    + H++ + Y
Sbjct: 606 PSPRTYRMLFSSLGGAGRVHEMENLY 631



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 208/420 (49%), Gaps = 11/420 (2%)

Query: 164 LLYSILIHALGRSEKLYE-AFLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y++L+  L R+ ++ E A +L +   +++ P   TY+ L    +R  D +  L+L  +
Sbjct: 259 ITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEE 318

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             + G        S+++  L +  KI  +  +++ + +    +     + N +I G+ + 
Sbjct: 319 SVKKGVKIGAYTCSILLNGLCKDGKISKA--EEVLQTLVNSGLLQTTVIYNTLINGYCQI 376

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD   A       +   + P   TY A+I  L    R  EA  +  E++++G+ P  + +
Sbjct: 377 GDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETF 436

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+  Y + G L+    ++S+M+  G+ P+  +Y  +++A+   G+   A  +L +M +
Sbjct: 437 NTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFI 496

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P + +Y+ I+  Y + G   + F + ++MKSSGV P    YN++I    K + +  
Sbjct: 497 KDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISE 556

Query: 459 AMAAFDRMLSEGIEPDTITWNTLID-CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           A    D + + G+ PD I++NTLI  C ++    DRA EL +EM + G  P   TY ++ 
Sbjct: 557 AEELLDSLRNYGLAPDVISYNTLISACCYR-SNTDRALELEKEMWKCGIKPSPRTYRMLF 615

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL-EGLSDQAV 576
           + LG   R  +++ L   M  + ++P    Y  +VD Y + G  +  +E L + +SD+ +
Sbjct: 616 SSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGE-ESKVEALRKEMSDKGI 674



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 7/212 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y  +++A  ++ K+ EA  +     +  +      YNA+I A       ++A  L  KM+
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+L+I+ L + ++I  +  ++L   +    +  D    N +I       +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEA--EELLDSLRNYGLAPDVISYNTLISACCYRSN 588

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+         G+ P   TY  + ++L  +GR  E E +++++ +  + P +  YN 
Sbjct: 589 TDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNI 648

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           ++  Y K G     E +  EM   G+   ++T
Sbjct: 649 MVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 254/577 (44%), Gaps = 62/577 (10%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESA------SALASSPSSLNRVEFKLAESYRAVPAPL- 128
           ++  QR +  PL  F   +S+   A       +L  +  +   +E    E  R   AP  
Sbjct: 22  TINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTI 81

Query: 129 --WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLS 186
             +++++  LC SN                                LG   +L+E  L+ 
Sbjct: 82  VTYNTIINGLCKSNE-------------------------------LGAGMELFEE-LVK 109

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +      +TYN LI +  +  DLE+A  L   M   G   + + YS++I  L +  +ID 
Sbjct: 110 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDE 169

Query: 247 S--LLQKLYKEIECDKIELDGQLLNDVIVGFAK---AGDASKAMRFLGMAQGVGLSPKTA 301
           +  L+Q++ ++  CD +  +    N  + G  K     +A + MR L     + +SP T 
Sbjct: 170 ARELIQEMTRK-SCDVLP-NIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTV 226

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T++ +I  L   G+T   EA  +++   G  P    YNAL+ G  K   ++ A  ++  M
Sbjct: 227 TFSTLIDGLCKCGQT--DEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              GV PD  TYS+L+DA+  A R + A  +L  M      PN   ++ I+ G       
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              FQ+  ++ +  + PD   +N++I    K      A A F+ M+++ ++PD +T+  L
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K G+ + A ++ + M   G  P   TYN++++ L +  R E+    L  M + G 
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +P  +TY +LV    ++ R DDA++ +  L           ++ G  P  +  N L++  
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKL-----------KSFGWDPDTVTYNILVDGL 513

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  +  +A  VL+ M   G +PD  T+      L R
Sbjct: 514 WKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHR 550



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 173/361 (47%), Gaps = 22/361 (6%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFE-ELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           S   A Y  V+ +L  +G T  A  +F  E+   G+ P    YN ++ G  K   L    
Sbjct: 42  SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGM 101

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +  E+ + G  PD  TY+ LID+   AG  E AR +   M      PN   YS ++ G 
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 416 RDRGEWQRTFQVLKEM--KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG--- 470
              G      ++++EM  KS  V P+   YN  +D   K +    A     R L +G   
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLR 220

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + PDT+T++TLID   KCG+ D  E   ++M   GY P   TYN ++N L + ++ E   
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            ++ +M  +G+ P+V+TY+ LVD + ++ R D+A+E L G++ +           G  P+
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR-----------GCTPN 327

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            +  NS+I+   +  R  EAF +   +    L PD VT+  L+    +   F +  +S L
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQ--ASAL 385

Query: 651 F 651
           F
Sbjct: 386 F 386



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 198/429 (46%), Gaps = 42/429 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF---L 184
           ++S L  LC  + + + A  ++  L+  +L  S + + +S LI  L +  +  EA    +
Sbjct: 191 YNSFLDGLCKQSMTAE-ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDM 249

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           ++       +TYNAL++   + D +E+A  ++  M   G   D I YS+++ +  + +++
Sbjct: 250 IAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D +L                 +LL+         G AS+           G +P   T+ 
Sbjct: 310 DEAL-----------------ELLH---------GMASR-----------GCTPNVVTFN 332

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           ++I  L  S R+ EA  +  ++    L P    +N L+ G  K G  + A  +  EM   
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            + PD  T+  LID    AG+ E+AR +L  M      PN   Y+ ++ G    G  +  
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEP 452

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            + L+EM SSG  P++  Y  ++    + +    A+    ++ S G +PDT+T+N L+D 
Sbjct: 453 CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDG 512

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            +K G+ ++A  + EEM  +G+ P + T+      L           LL  + A+G+LP+
Sbjct: 513 LWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPD 572

Query: 545 VVTYTTLVD 553
             T ++++D
Sbjct: 573 ATTCSSILD 581


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 14/450 (3%)

Query: 198 ALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +L+ A  R DDL +A  +  KM +++    + + YS++I  L    +++ +   +L +E+
Sbjct: 234 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAF--QLKQEM 291

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                +   +    +I      G   KAM+ L         P   TY  +I  L   G+ 
Sbjct: 292 VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 351

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  VF ++ + GL P    +NAL+ GY K G++  A  ++S ME+    P+  TY+ L
Sbjct: 352 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ++      +   A ++L+ +  +   P+   Y+ ++ G+   G+    F +   M S+G+
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EPD   +  +ID   K   L  A      M+ +GI  D +T+  LID H K G+      
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LFE M E        T+N  ++ LG+  +  +   +LG M   GL+P+VVT+T L++ + 
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++G    +++ LE            M+  G  P+      +IN    + R  EA  +L  
Sbjct: 592 RAGETALSLKMLER-----------MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 640

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           M   G+ P+  TY  L+KA ++  +  + F
Sbjct: 641 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 670



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 210/463 (45%), Gaps = 22/463 (4%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALI 200
           A+ V   + K   C    + YSILIH L  + +L EAF L Q       + +  TY  LI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIEC 258
            A       +KA+ ++ +M       +   Y+++I  L R  KI+  + + +K+ K   C
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 367

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I       N +I G+ K G    A + L + +     P   TY  ++  L    ++ +
Sbjct: 368 PGI----ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +   + ++GL P    YN L+ G+ K G L  A  + + M  +G+ PD  T++ LID
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                GR E A  +L  M       +   ++ ++ G+   G+ +    + + M  +    
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
             H +N  +D  GK   L+ A A   +M+  G+ P  +T   LI+ H + G    + ++ 
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E M++ G  P   TY I+IN L    R E+ + +L +M + G+ PN  TY  LV  + ++
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           GR D A + +             M  +G +P++   ++L++ F
Sbjct: 664 GRLDRAFQIVS-----------TMVKNGCQPNSHIYSALLSGF 695



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 166/419 (39%), Gaps = 70/419 (16%)

Query: 260 KIELDGQLLNDVIVGFAKAG----------DASKAMRFLGMAQG---VGLSPKTATYAAV 306
           +I+L G L++  + G A+              +  ++ +G   G   +G       Y+ +
Sbjct: 106 RIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTL 165

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L+       A  V+  +   G       Y  ++    K G+++ AE    ++ R G 
Sbjct: 166 LMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 225

Query: 367 LPDEHTYSLLIDAYANAGR---WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             D H  + L+   AN  R    E+ R+  K  +  + +PNS  YS ++ G  + G  + 
Sbjct: 226 GLDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 283

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            FQ+ +EM                                   + +G +P T T+  LI 
Sbjct: 284 AFQLKQEM-----------------------------------VEKGCQPSTRTYTVLIK 308

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  D+A ++ +EM  +   P   TY I+I+ L  + + E+   +   M   GL P
Sbjct: 309 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 368

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            ++T+  L++ Y           C EG    A     VM     KP+    N L+     
Sbjct: 369 GIITFNALINGY-----------CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
             +  +AF +L+ + +NGL PD VTY  L      VD F K     + FNI+  ++ +G
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNIL------VDGFCKEGQLNMAFNIFNSMNSAG 470



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 123/293 (41%), Gaps = 30/293 (10%)

Query: 163 ELLYSILIHA---LGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E+ ++ LI     +G+++ +   F  ++  R   T  T+N  + A  ++  L +A  ++ 
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM + G     + ++++I+   R  +   SL  K+ + ++      +      +I G   
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHCRAGETALSL--KMLERMKQAGCSPNVYTYTIIINGLCN 627

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A   L      G+SP   TYA ++ A   +GR   A  +   + ++G +P +  
Sbjct: 628 NGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHI 687

Query: 338 YNALLKGYV------------KMGYL---------KDAEFVVSEMERSGVLPDEHTYSLL 376
           Y+ALL G+V              G L          D   + +E+++ GV P E  Y+ L
Sbjct: 688 YSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PTEDLYNFL 746

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +      GR   A  + ++M      P+  I S I+  Y    ++    + +K
Sbjct: 747 VVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMK 798


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 211/453 (46%), Gaps = 23/453 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N LI+       +    ++++K+ + GY  D +  + +I+ L    ++  +L     
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH-- 152

Query: 254 KEIECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                DK+   G  LN V     I G  K GD   A++ L    G    P    Y+ +I 
Sbjct: 153 -----DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           AL       EA  +F E+   G+      Y+ L+ G+   G LK+A  +++EM    + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           + +TY++L+DA    G+ + A+ VL  M  +  KP+   YS ++ GY    E ++   V 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   GV PD H Y ++I+ F K   +  A+  F  M  + + P  +T+++LID   K 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR     +L +EM++RG      TY+ +I+ L +    +    L   M+ Q + PN+ T+
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L+D   + GR  DA E            F+ + T G   +    N +IN   +     
Sbjct: 448 TILLDGLCKGGRLKDAQE-----------VFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           EA  +L  M++NG  P+  T+ T++ AL + D+
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 189/432 (43%), Gaps = 16/432 (3%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           DD     N M  MR        I ++ ++ S  +     +++   L   +E   I+ D  
Sbjct: 41  DDAVSQFNRMLCMRHTP---PIIQFNKILDSFAKMKHYSTAV--SLSHRLELKGIQPDLI 95

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  F   G  +     L      G  P T T   +I  L   G+  +A    ++L
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G +    +Y  L+ G  K+G  + A  ++ +++     P+   YS +IDA       
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  EM V     +   YS ++ G+   G+ +    +L EM    + P+ + YN++
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A +    ML   ++PD IT++TL+D +F      +A+ +F  M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY I+IN   + +  ++   L   M  + ++P +VTY++L+D   +SGR    I 
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR----IP 391

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            +  L D+       MR  G     +  +SLI+   ++     A A+   MK+  ++P++
Sbjct: 392 YVWDLIDE-------MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNI 444

Query: 627 VTYTTLMKALIR 638
            T+T L+  L +
Sbjct: 445 FTFTILLDGLCK 456



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 37/394 (9%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           LL+Q  +L  ++Y  LI+   +  D   A+ L+ K+       +   YS +I +L +   
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 214

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +    L+ E+    I  D    + +I GF   G   +A+  L       ++P   TY
Sbjct: 215 VSEA--YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++ AL   G+  EA++V   + ++ +KP    Y+ L+ GY  +  +K A+ V + M  
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332

Query: 364 SGVLPDEHTY-----------------------------------SLLIDAYANAGRWES 388
            GV PD HTY                                   S LID    +GR   
Sbjct: 333 MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPY 392

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              ++ EM       +   YS ++ G    G   R   +  +MK   + P+   + +++D
Sbjct: 393 VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLD 452

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A   F  +L++G   +  T+N +I+ H K G  + A  +  +M++ G  P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              T+  +I  L +++  +  ++LL  M A+GLL
Sbjct: 513 NAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 122 RAVPAPL--WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRS 176
           R  PA +  + SL+  LC  N  +D A A+ + ++   +    +++ +L   L    GR 
Sbjct: 403 RGQPADVITYSSLIDGLCK-NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG-GRL 460

Query: 177 EKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           +   E F  LL++   L   TYN +I+   +   LE+AL ++SKM  +G   +   +  +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520

Query: 235 IQSLTRTNKIDSSLLQKLYKEI 256
           I +L + ++ D +  +KL +++
Sbjct: 521 IIALFKKDENDKA--EKLLRQM 540


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 223/501 (44%), Gaps = 17/501 (3%)

Query: 160 YSYELLYSILIHAL-GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           YSY  L  +L+      + K+Y+  ++S+  + +  TY+AL+ A  R  D  K +NL+ +
Sbjct: 202 YSYNGLIHLLLPGFCNEALKVYKR-MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEE 260

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   +   Y++ I++L R  +ID +    ++KE++ +    D      +I     A
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDA--WGIFKEMDDEGCGPDVITYTVLIDALCAA 318

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA       +    SP   TY  ++      G     +  + E++  G  P    Y
Sbjct: 319 GKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTY 378

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L++   K G +  A  ++  M   G+ P+ HTY+ +I     A R + A  +L+ ME 
Sbjct: 379 TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP +F Y   +  Y   G+  +     + MK  G+ P     N  + T  +   +  
Sbjct: 439 LGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ +   G+ PD++T+N L+ C+ K G+ D+A +L  EM  +G  P     N +IN
Sbjct: 499 AEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLIN 558

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  R +   ++ G ++   L P VVTY  L+   G+ G+   A+E            
Sbjct: 559 TLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALE-----------L 607

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M   G  P+ +  NSL++   ++     A  +   M      PDV+TY T++  LIR
Sbjct: 608 FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIR 667

Query: 639 VDKFHKVFSSYLFFNIYKMLS 659
             +    F  + F  + K LS
Sbjct: 668 EGRIDYAF--WFFHQMKKFLS 686



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 244/533 (45%), Gaps = 24/533 (4%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
            ++SLL  L S N ++DLA  +   +   N C    L Y+ +I+ L R  ++  AF    +
Sbjct: 623  FNSLLDCL-SKNDAVDLALKMFCRMTMMN-CNPDVLTYNTIIYGLIREGRIDYAFWFFHQ 680

Query: 189  QR--LTP--LTYNALISACARNDDLEKALNL-MSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +  L+P  +T   LI    R+  +E A+ + M  + Q     +   +  +++ +    +
Sbjct: 681  MKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAE 740

Query: 244  IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
            I+ ++     + + C+ +  D  ++  +I    K   A  A   F    + +G+ P   +
Sbjct: 741  IEEAI--SFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLES 798

Query: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
            Y  ++  L  S  T +A  +FE++K +G  P    YN LL  + K   +     + SEM 
Sbjct: 799  YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858

Query: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              G  P+  T++++I A   +     A  +  E+      P    Y  ++ G    G  +
Sbjct: 859  SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918

Query: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
            +  ++ +EM   G  P++  YN++I+ FGK   +  A   F +M+ EGI PD  ++  L+
Sbjct: 919  QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978

Query: 483  DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            +C    GR D A + FEE++  G  P T +YN +IN LG+  R ++   L   M+ +G+ 
Sbjct: 979  ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038

Query: 543  PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            P++ TY  L+   G +G+ D A++  E L  Q V         GL+PS    N+LI    
Sbjct: 1039 PDLYTYNALILHLGIAGKVDVAVKMYEEL--QLV---------GLEPSVFTYNALIRGHS 1087

Query: 603  EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY---LFF 652
                  +AF+V + M   G  P+  T+  L     R    H  F +    LFF
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFIGLFF 1140



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 213/477 (44%), Gaps = 16/477 (3%)

Query: 175 RSEKLYEAFLLSQRQRL--TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           R E +   F L Q++ +     TY  +  A +    + +A   + KM + G+  +  +Y+
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L      + +L  K+YK +  + ++   +  + ++V   + GD  K M  L   +
Sbjct: 206 GLIH-LLLPGFCNEAL--KVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMK 262

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
            +GL P   TY   I AL  + R  +A  +F+E+ + G  P    Y  L+      G L 
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A+ +  +M  S   PD  TY  L+D +   G  E+ +    EMEV    P+   Y+ ++
Sbjct: 323 KAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILI 382

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G+  R F +L  M + G+ P+ H YN MI    K   L  A+   + M S G++
Sbjct: 383 EALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVK 442

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P   ++   ID + K G   +A + FE M++RG  P     N  +  L E  R  + + +
Sbjct: 443 PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDI 502

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             ++   GL P+ VTY  L+  Y ++G+ D A + L             M + G +P  +
Sbjct: 503 FNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSE-----------MISKGCEPDVM 551

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +NSLIN   +  R   A+ +   +K   L P VVTY  L+  L +  K  K    +
Sbjct: 552 IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELF 608



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 249/579 (43%), Gaps = 34/579 (5%)

Query: 69  EDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNR---VEFKL-AESYRAV 124
           ED   V  L +++  +  L  +++          +  +P +L +   V F L A SY   
Sbjct: 148 EDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNG- 206

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
              L H LL   C  N ++ +   ++S   K ++       YS L+ ALGR     +   
Sbjct: 207 ---LIHLLLPGFC--NEALKVYKRMISEGMKPSM-----KTYSALMVALGRRGDTRKIMN 256

Query: 185 LSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L +  +   L     TY   I A  R   ++ A  +  +M  +G   D I Y+++I +L 
Sbjct: 257 LLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALC 316

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
              K+D +  ++LY ++       D      ++  F K GD     RF    +  G +P 
Sbjct: 317 AAGKLDKA--KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I AL  SG    A  + + +   G+ P    YN ++ G +K   L +A  ++ 
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            ME  GV P   +Y L ID Y  +G    A    + M+     P+    +  L    + G
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                  +  ++   G+ PD+  YN+++  + K   +  A      M+S+G EPD +  N
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIIN 554

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LI+  +K GR D A ++F  ++     P   TYNI++  LG++ +      L G+M   
Sbjct: 555 SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTES 614

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PN +T+ +L+D   +    +DA+       D A+  F  M      P  L  N++I 
Sbjct: 615 GCPPNTITFNSLLDCLSK----NDAV-------DLALKMFCRMTMMNCNPDVLTYNTIIY 663

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               + R   AF     MK+  L PD VT  TL+  ++R
Sbjct: 664 GLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVR 701



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 12/207 (5%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N M++   +   +   +  FD M  + I  +  T+ T+       G   RA     +M E
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G+     +YN +I+LL      E +K +   M ++G+ P++ TY+ L+   G+ G    
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFCNEALK-VYKRMISEGMKPSMKTYSALMVALGRRGD--- 250

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                   + + +N    M++ GL+P+       I A G  +R  +A+ + + M + G  
Sbjct: 251 --------TRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYL 650
           PDV+TYT L+ AL    K  K    Y+
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYV 329


>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 250/519 (48%), Gaps = 36/519 (6%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    EK  E F  + SQ    +  +Y ALI+A  RN
Sbjct: 137 YMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRN 196

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              E +L L+ +M+++    + + Y+ VI +  R + +D   L  L+ E+  + ++ D  
Sbjct: 197 GQYETSLELLERMKRERVSPNILTYNTVINACARGD-LDWEGLLGLFAEMRHEGVQPDLV 255

Query: 267 LLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
             N ++   A  G   +A M F  M +G G+ P+  TY+ ++      G+  +   + +E
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++  G  P   +YN L++ + K+G +K+A  V  +M+ +G +P+  TYS+L++ Y   GR
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGR 374

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++  R +  +M+ S A+P++  Y+ ++  + + G ++    +  ++    ++P+   Y  
Sbjct: 375 YDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++   GK      A      M  +GI P +  ++ LI+ + +   YD A   F  M E G
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                 TYN +I+       +++ + +L  MR  G+  N  +++ +++ Y QSG++++AI
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAI 554

Query: 566 E------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +                        C  GL D++   F  ++  G+ PS L    ++  +
Sbjct: 555 KAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVY 614

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            ++ R  +A  +L  M    +K  V +   ++  +I+ D
Sbjct: 615 AKNGRWDDASELLDEM----IKTRVSSIHQVIGQMIKGD 649



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 30/412 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA  GD  +++R F  M + +   P    Y  +I+ L   G   +   +F
Sbjct: 112 LNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIF 171

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+   G+     +Y AL+  Y + G  + +  ++  M+R  V P+  TY+ +I+A A  
Sbjct: 172 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
              WE    +  EM     +P+   Y+ +L+    RG       V K M   G+ P+   
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +++TFGK   L         M SEG  PD  ++N LI+ H K G    A ++F++MQ
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P  +TY+I++NL G+  R++DV+ L   M+     P+  TY  L+ ++G+ G F 
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411

Query: 563 DAIECLEGLSDQAVN---------------------AFRV---MRTDGLKPSNLALNSLI 598
           + +     L D+ ++                     A ++   M   G+ PS+ A + LI
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            A+G+     EA      M E G K  + TY +L+    R    +K F + L
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFAR-GGLYKEFEAIL 522



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/384 (20%), Positives = 155/384 (40%), Gaps = 43/384 (11%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI A   LG  ++  + F   Q     P   TY+ L++   ++   +    L  +M+
Sbjct: 327 YNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D   Y+++I+           +   L+ ++  + I+ + +    ++    K G 
Sbjct: 387 ESSAEPDATTYNILIRVFGEGGYFKEVV--TLFHDLVDENIDPNMETYEGLVFACGKGGL 444

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A + L    G G+ P +  Y+ +I A   +    EA   F  + E G K     YN+
Sbjct: 445 HEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNS 504

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + + G  K+ E ++S M   G+  +  ++S +I+ Y  +G++E A     EME   
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMR 564

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK-------- 452
            + +      +L  Y   G    + +   E+K+SG+ P    Y +M+  + K        
Sbjct: 565 CELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDAS 624

Query: 453 ----------YNCLHHAMA------------------AFDRMLSEGIEPDTITWNTLIDC 484
                      + +H  +                    FD++ +EG       +NTL++ 
Sbjct: 625 ELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEA 684

Query: 485 HFKCGRYDRAEELFEEMQERGYFP 508
            +  G+  RA  +  E  +RG FP
Sbjct: 685 LWWLGQKGRAARVLTEATKRGLFP 708


>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 250/519 (48%), Gaps = 36/519 (6%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    EK  E F  + SQ    +  +Y ALI+A  RN
Sbjct: 137 YMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRN 196

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              E +L L+ +M+++    + + Y+ VI +  R + +D   L  L+ E+  + ++ D  
Sbjct: 197 GQYETSLELLERMKRERVSPNILTYNTVINACARGD-LDWEGLLGLFAEMRHEGVQPDLV 255

Query: 267 LLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
             N ++   A  G   +A M F  M +G G+ P+  TY+ ++      G+  +   + +E
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEG-GIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++  G  P   +YN L++ + K+G +K+A  V  +M+ +G +P+  TYS+L++ Y   GR
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGR 374

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++  R +  +M+ S A+P++  Y+ ++  + + G ++    +  ++    ++P+   Y  
Sbjct: 375 YDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++   GK      A      M  +GI P +  ++ LI+ + +   YD A   F  M E G
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                 TYN +I+       +++ + +L  MR  G+  N  +++ +++ Y QSG++++AI
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAI 554

Query: 566 E------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +                        C  GL D++   F  ++  G+ PS L    ++  +
Sbjct: 555 KAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVY 614

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            ++ R  +A  +L  M    +K  V +   ++  +I+ D
Sbjct: 615 AKNGRWDDASELLDEM----IKTRVSSIHQVIGQMIKGD 649



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 30/412 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA  GD  +++R F  M + +   P    Y  +I+ L   G   +   +F
Sbjct: 112 LNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIF 171

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+   G+     +Y AL+  Y + G  + +  ++  M+R  V P+  TY+ +I+A A  
Sbjct: 172 DEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
              WE    +  EM     +P+   Y+ +L+    RG       V K M   G+ P+   
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +++TFGK   L         M SEG  PD  ++N LI+ H K G    A ++F++MQ
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P  +TY+I++NL G+  R++DV+ L   M+     P+  TY  L+ ++G+ G F 
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411

Query: 563 DAIECLEGLSDQAVN---------------------AFRV---MRTDGLKPSNLALNSLI 598
           + +     L D+ ++                     A ++   M   G+ PS+ A + LI
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            A+G+     EA      M E G K  + TY +L+    R    +K F + L
Sbjct: 472 EAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFAR-GGLYKEFEAIL 522



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/384 (20%), Positives = 155/384 (40%), Gaps = 43/384 (11%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI A   LG  ++  + F   Q     P   TY+ L++   ++   +    L  +M+
Sbjct: 327 YNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMK 386

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D   Y+++I+           +   L+ ++  + I+ + +    ++    K G 
Sbjct: 387 ESSAEPDATTYNILIRVFGEGGYFKEVV--TLFHDLVDENIDPNMETYEGLVFACGKGGL 444

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A + L    G G+ P +  Y+ +I A   +    EA   F  + E G K     YN+
Sbjct: 445 HEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNS 504

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + + G  K+ E ++S M   G+  +  ++S +I+ Y  +G++E A     EME   
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMR 564

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK-------- 452
            + +      +L  Y   G    + +   E+K+SG+ P    Y +M+  + K        
Sbjct: 565 CELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDAS 624

Query: 453 ----------YNCLHHAMA------------------AFDRMLSEGIEPDTITWNTLIDC 484
                      + +H  +                    FD++ +EG       +NTL++ 
Sbjct: 625 ELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEA 684

Query: 485 HFKCGRYDRAEELFEEMQERGYFP 508
            +  G+  RA  +  E  +RG FP
Sbjct: 685 LWWLGQKGRAARVLTEATKRGLFP 708


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 212/447 (47%), Gaps = 13/447 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN L++  A    ++   ++ ++M   G   D +  + +I++L R +++ +++L  + +
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVL--MLE 219

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  D      ++ GF + G    A+R        G SP   T   +I      G
Sbjct: 220 EMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMG 279

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +A    ++    G +P    YN  +    + G++  A  V+  M + G  PD  TY+
Sbjct: 280 RVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 339

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I+  +  G  + A+ ++ +M      P++  ++ ++     +   +    + +E+   
Sbjct: 340 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK 399

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD + +N++I+   K    H  +  F+ M S G  PD +T+N LID     G+   A
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L +EM+  G    T TYN +I+ L +Q R E+ + +   M A G+  + VT+ TL+D 
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++ R DDA E +E            M  +GL+PSN+  NS++  + +     +A  +L
Sbjct: 520 LCKAKRIDDATELIEQ-----------MVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           + M  NG + DVVTY TL+  L +  +
Sbjct: 569 ETMTANGFEIDVVTYGTLINGLCKAGR 595



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 211/470 (44%), Gaps = 28/470 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL- 252
           +T N LI A  R   +  A+ ++ +M       D   ++ ++Q       I+++L  K  
Sbjct: 196 VTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTK 255

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E  C    +    +N +I G+ K G    A+ ++      G  P   TY   +  L  
Sbjct: 256 MMETGCSPTRVT---VNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G    A  V + + + G  P    YN ++    K G L +A+ +V++M   G LPD  T
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ LI A  +  R E A  + +E+ V    P+ + ++ ++      G+     ++ +EMK
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           SSG  PD   YN++ID       L +A+     M S G    T+T+NT+ID   K  R +
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEE+F++M   G      T+N +I+ L + +R +D   L+  M  +GL P+ +TY +++
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552

Query: 553 DIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLK 588
             Y + G    A + LE                        G +  A+   R MR  G++
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P+  A N +I +        +A ++ + M E G  PD +TY  + + L R
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCR 662



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 206/453 (45%), Gaps = 18/453 (3%)

Query: 199 LISACARNDDLEKALNLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           L++A     D E AL ++ S + ++ +      Y  +IQ L      D  L++ L +E+ 
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFD--LMEGLVREMR 116

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRT 316
            +  E    ++   +  +A+      A+  +       G+   TA Y  ++  L+   R 
Sbjct: 117 REGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRM 176

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
              E+V+ E+ + G++P     N L+K   +   ++ A  ++ EM    V PDE T++ L
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +  +   G  E+A  V  +M  +   P     + ++ GY   G  +     +++  + G 
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EPD   YN  +    +   + HA+   D ML EG +PD  T+NT+I+C  K G  D A+ 
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +  +M +RG  P TTT+N +I  L  Q R E+   L   +  +GL P+V T+  L++   
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINAL- 415

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G     +  F  M++ G  P  +  N LI+      +   A  +L+ 
Sbjct: 416 ----------CKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465

Query: 617 MKENGLKPDVVTYTTLMKAL---IRVDKFHKVF 646
           M+ NG     VTY T++ AL   +R+++  +VF
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF 498



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 11/237 (4%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDL 209
           K + C   E+ Y+ILI  L    KL  A  LL + +      + +TYN +I A  +   +
Sbjct: 432 KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRI 491

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQL 267
           E+A  +  +M   G     + ++ +I  L +  +ID  + L++++ KE     ++     
Sbjct: 492 EEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE----GLQPSNIT 547

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  +   ++
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
             G++P  KAYN +++   +   L+DA  +  EM   G  PD  TY ++       G
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGG 664


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 226/497 (45%), Gaps = 42/497 (8%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI-----NYSLVIQSLTRTNKIDS 246
           T +T+  +I    + + L++AL    KMR+      F+      Y++V+  L +  ++ S
Sbjct: 6   TVVTWTIIIDGFCKANQLKQALACFEKMRE------FVAPNERTYNVVVNGLCKA-RLTS 58

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAA 305
              + L +  +   +  D    + VI GF K G+  +A   L  M    G++P   TY +
Sbjct: 59  KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE-MERS 364
           V+  L   G+   A  +  E+K  G++P    ++AL+ G+     + +A  +  E +  S
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              PD  TY+ LID +  +G  E A  +L  ME     PN   YS +L G    G+  + 
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             + + M S G  P+   Y  +I      + +  A    D M +    PDT+++N L+D 
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLP 543
           + + GR + A++LF+EM  +   P   TY  ++       R E+ + LL NM+ A G+ P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358

Query: 544 NVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAF 579
           +VVTY+ +V  Y ++ RF +A E                        C  G  D A+   
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           + M    ++PS    NS+I A        EA+ +L  M  +GL+P +VTYTTL++   R 
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478

Query: 640 DKFHKVFSSYLFFNIYK 656
            +      +Y  F + +
Sbjct: 479 GRME---IAYELFEVMR 492



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 249/542 (45%), Gaps = 34/542 (6%)

Query: 119 ESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           E  R   AP    ++ ++  LC +  +   AY V+  ++         + YS +I+   +
Sbjct: 31  EKMREFVAPNERTYNVVVNGLCKARLT-SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCK 89

Query: 176 SEKLYEAFLLSQ----RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
             ++  A  + +    R  + P  +TY +++    R+  +++A  ++ +M+  G   D  
Sbjct: 90  QGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 149

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
            +S +I       K+D +L  KLYKEI      + D      +I GF K+G+  KAM+ L
Sbjct: 150 TFSALITGWCNARKVDEAL--KLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKML 207

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G+ +G    P   TY++++  L  +G   +A  +F  +   G  P    Y  L+ G    
Sbjct: 208 GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA 267

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
             +  A  ++ EM  +   PD  +Y+ L+D Y   GR E A+ + KEM      P+   Y
Sbjct: 268 HKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITY 327

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           + ++ G+ +    +    +L+ MK++ G++PD   Y++++  + +      A      M+
Sbjct: 328 TCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 387

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           +  + P+ +T+++LID   K GR D A E+ + M  +   P   T+N +I  L      +
Sbjct: 388 ARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMD 447

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR---- 583
           +  +LL  M A GL P +VTYTTL++ + ++GR + A E            F VMR    
Sbjct: 448 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE-----------LFEVMRKKAK 496

Query: 584 ----TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                  L P   A ++LI    + +   +A AV++ ++    +P       ++  L+R 
Sbjct: 497 KSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRA 555

Query: 640 DK 641
            +
Sbjct: 556 GR 557



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/388 (21%), Positives = 157/388 (40%), Gaps = 50/388 (12%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +S   EK  +   + + ++  P  +TY++L+    +  DL++AL+L  +M 
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I  L   +K+D++ L  L  E+       D    N ++ G+ + G 
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARL--LMDEMTATCCPPDTVSYNALLDGYCRLGR 304

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYN 339
             +A +           P   TY  ++    N+ R  EA  + E +K  +G+ P    Y+
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ GY +     +A   + EM    V P+  TYS LID    AGR + A  VLK M   
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN----- 454
             +P+   ++ ++      G+    +++L  M + G+EP    Y  +++ F +       
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484

Query: 455 ---------------------------------C----LHHAMAAFDRMLSEGIEPDTIT 477
                                            C    +  AMA  + + S   EP    
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERG 505
              ++D   + GR + A +L   + + G
Sbjct: 545 CLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 28/202 (13%)

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +P  +TW  +ID   K  +  +A   FE+M+E    P   TYN+++N L +         
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 532 LLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
           +L  MR  + + P++VTY+T+++ + + G  D A E                        
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 567 -CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL-QYMKENGLKP 624
            C +G  D+A    R M+  G++P     ++LI  +   ++  EA  +  + +  +  KP
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 625 DVVTYTTLMKALIRVDKFHKVF 646
           DVVTYT L+    +     K  
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAM 204



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 10/176 (5%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L   GR +   E       +R+ P   T+N++I A  R  D+++A  L+  M 
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 457

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS-----LLQKLYKEIECDKIELDGQLLNDVIVGF 275
             G     + Y+ +++  +RT +++ +     +++K  K+       +  Q  + +I G 
Sbjct: 458 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGL 517

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
            KA +  KAM  +   +     P      A++  L  +GRT EA  +   + + GL
Sbjct: 518 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 220/492 (44%), Gaps = 19/492 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISA-CARNDDLEKALNLMSKMRQD 222
           Y+ ++    R+ +L  A  L+    + P   TY  ++ A CAR   +  AL ++ +M + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGR-IADALAVLDEMPRR 151

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G       Y +++++  R     S++  ++ +++      LD    N V+      G   
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAV--RVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KA+  L      G  P   +Y AV+  L  + R    + + EE+      P    +N L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               + G  +    V+++M   G  PD   Y+ +ID     G  + A  +L  M     K
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ +L G      W+ T ++L EM       D   +N+++D F +   +   +  
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            ++ML  G  PD IT+ T+I+   K G  D A  L + M   G  P T +Y I++  L  
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
            ERW D + L+  M  QG   N +T+ TL++             C +GL +QA+   + M
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-----------CKKGLVEQAIELLKQM 498

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +G  P  ++ +++I+  G+  +  EA  +L  M   G+ P+ + Y+++  AL R  + 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 643 HKVFSSYLFFNI 654
           +KV    +F NI
Sbjct: 559 NKVIQ--MFDNI 568



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 198/488 (40%), Gaps = 48/488 (9%)

Query: 123 AVPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           AVP P     +  +++ LC+     D A AV+  + +   C     +Y +++ A  R   
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRG-CAPIPPMYHVILEAACRGGG 172

Query: 179 LYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
              A      L ++   L     N +++A      ++KAL+L+  +   G   D ++Y+ 
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNA 232

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           V++ L    +     +Q+L +E+       +    N +I    + G   +    L     
Sbjct: 233 VLKGLCMAKR--WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAE 290

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G +P    YA +I  +   G    A  +   +   GLKP    YN LLKG       ++
Sbjct: 291 HGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 350

Query: 354 AEFVVSEM-------------------------ER----------SGVLPDEHTYSLLID 378
            E +++EM                         +R           G +PD  TY+ +I+
Sbjct: 351 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVIN 410

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +   G  + A ++LK M     KPN+  Y+ +L G      W     ++ +M   G   
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 470

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ D A EL 
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
             M  +G  P T  Y+ + + L  + R   V ++  N++   +  + V Y  ++    + 
Sbjct: 531 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590

Query: 559 GRFDDAIE 566
           G  + AIE
Sbjct: 591 GETERAIE 598



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRS---EKLYEA 182
           ++++LK LC +       +  V  L +  +   C    + ++ LI  L R+   E+++E 
Sbjct: 230 YNAVLKGLCMAKR-----WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                    TP    Y  +I    +   L+ A  ++++M   G   + + Y+ +++ L  
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             + + +  ++L  E+      LD    N ++  F + G   + +  L      G  P  
Sbjct: 345 AERWEET--EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV 402

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI      G   EA  + + +   G KP T +Y  +LKG        DAE ++S+
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M + G   +  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N 
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K G  +RA E    M   G  P  +TY I+I  L  +   ++ + +L  + ++G
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642

Query: 541 LL 542
            L
Sbjct: 643 AL 644


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 135/517 (26%), Positives = 230/517 (44%), Gaps = 58/517 (11%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R + + + +  L+  ++R   ++P TY   +     + DL+ A N++ +M 
Sbjct: 388 YASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMG 447

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I++  + ++   ++  ++ KE+    I  D    N +I+G +KA  
Sbjct: 448 ASGCRPNVVIYTTLIKTFLQKSRFGDAV--RVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
             +A  FL      G  P   TY A I                               T 
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 310 LSN----SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           L N     G+ IEA + F  + E G+    K Y  L+ G VK G + DAE +  EM   G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  +Y  LID ++  G  + A  +  EM  +    N  IY+ +L G+   GE ++  
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L EM   G  P+   Y  +ID + K   L  A   FD M  +G+ PD+  + TL+D  
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQERWED-VKRLLGNMRAQGL 541
            +    +RA  +FE   E+G    +  +N +IN +   G+ E   D + RL+     +  
Sbjct: 746 CRLNDVERAITIFET-NEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG 804

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VTY  ++D             C EG  + A   F  M+   L P+ +   SL+N +
Sbjct: 805 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGY 853

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  R +E F+V   +   G++PD + Y+ ++ A ++
Sbjct: 854 DKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLK 890



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 213/490 (43%), Gaps = 48/490 (9%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN LI    +   LE A +L+ +M   G   D + YS++I  L +    D++    L  
Sbjct: 282 SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA--NGLVH 339

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI------- 307
           E+      +D  + +  I   +K G   KA          G++P    YA++I       
Sbjct: 340 EMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREK 399

Query: 308 ----------------------------TALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                                         + +SG    A  + +E+  SG +P    Y 
Sbjct: 400 NVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYT 459

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+K +++     DA  V+ EM   G+ PD   Y+ LI   + A + + AR  L EM  +
Sbjct: 460 TLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN 519

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP++F Y   ++GY + GE+    + +KEM   GV P+      +I+ + K   +  A
Sbjct: 520 GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEA 579

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +AF  M+ +GI  D  T+  L++   K G+ + AEE+F EM+ +G  P   +Y  +I+ 
Sbjct: 580 CSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDG 639

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +    +    +   M   GL  NV+ Y  L+  + +SG  + A E L+ +S +     
Sbjct: 640 FSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK----- 694

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                 G  P+ +   ++I+ + +    AEAF +   MK  GL PD   YTTL+    R+
Sbjct: 695 ------GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRL 748

Query: 640 DKFHKVFSSY 649
           +   +  + +
Sbjct: 749 NDVERAITIF 758



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 186/446 (41%), Gaps = 18/446 (4%)

Query: 160 YSYELLYSILIHAL--GRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALN 214
           ++  + YSILI  L  GR+          ++S    + P+ Y+  I   ++   +EKA  
Sbjct: 312 FADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKA 371

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           L   M   G       Y+ +I+   R   +      +L  EI+   I +        + G
Sbjct: 372 LFDGMITFGVTPGARAYASLIEGFFREKNVRKG--YELLVEIKKRNIVISPYTYGTAVKG 429

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
              +GD   A   +      G  P    Y  +I       R  +A  V +E++E G+ P 
Sbjct: 430 MCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD 489

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
           T  YN+L+ G  K   + +A   + EM  +G  PD  TY   I  Y  AG + SA   +K
Sbjct: 490 TFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVK 549

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM      PN  + + ++  Y  +G+        + M   G+  D   Y V+++   K  
Sbjct: 550 EMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            ++ A   F  M  +GI PD  ++ TLID   K G   +A  +F+EM + G       YN
Sbjct: 610 KVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYN 669

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           +++         E  K LL  M  +G  PN VTY T++D Y +SG   +A +        
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ-------- 721

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINA 600
               F  M+  GL P +    +L++ 
Sbjct: 722 ---LFDEMKLKGLVPDSFVYTTLVDG 744



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/551 (23%), Positives = 243/551 (44%), Gaps = 59/551 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + + +K +CSS   +D AY +V  +     C    ++Y+ LI    +  +  +A  + + 
Sbjct: 423 YGTAVKGMCSS-GDLDGAYNIVKEMGASG-CRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480

Query: 189 QR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R   + P T  YN+LI   ++   +++A + + +M ++G+  D   Y   I       +
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 244 IDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTA 301
             S+   K  KE +EC  I  +  L   +I  + K G   +A   F  M +  G+     
Sbjct: 541 FASA--DKYVKEMLECGVIP-NKVLCTGLINEYCKKGKVIEACSAFRSMVEQ-GILGDAK 596

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L  +G+  +AE +F E++  G+ P   +Y  L+ G+ K+G ++ A  +  EM
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            ++G+  +   Y++L+  +  +G  E A+ +L EM      PN+  Y  I+ GY   G+ 
Sbjct: 657 VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDL 716

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD----------------- 464
              FQ+  EMK  G+ PD+  Y  ++D   + N +  A+  F+                 
Sbjct: 717 AEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALI 776

Query: 465 -----------------RMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
                            R++    +    P+ +T+N +ID   K G  + A+ELF  MQ+
Sbjct: 777 NWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQK 836

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P   TY  ++N   +  R  ++  +   + A G+ P+ + Y+ +++ + + G    
Sbjct: 837 ANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTK 896

Query: 564 AIECLEGL-SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           A+  L+ + +  AV+       DG K S     +L++ F +      A  V++ M     
Sbjct: 897 ALVLLDQMFAKNAVD-------DGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKY 949

Query: 623 KPDVVTYTTLM 633
            PD  T   L+
Sbjct: 950 IPDSSTVIELI 960



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 192/489 (39%), Gaps = 28/489 (5%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           L+ +L R   L +A L   R  L    Y  ++    RN       ++ S     G HC  
Sbjct: 185 LVPSLARCNHLLDALLKRNRLDLFWDVYKGMVE---RN----VVFDVQSYEMLIGAHCRD 237

Query: 229 INYSLVIQSLTRTNK--------IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            N  L    L +T +        +D +L  +L K + C  +    Q  N +I G  K   
Sbjct: 238 GNVQLAKDVLLKTEEELGTATLNVDEAL--ELKKSMSCKGLVPSRQSYNLLIDGLCKQKR 295

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A   L     VGL      Y+ +I  L        A  +  E+   G       Y+ 
Sbjct: 296 LEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDY 355

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +    K G ++ A+ +   M   GV P    Y+ LI+ +           +L E++  +
Sbjct: 356 FICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRN 415

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              + + Y   + G    G+    + ++KEM +SG  P+   Y  +I TF + +    A+
Sbjct: 416 IVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAV 475

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  +GI PDT  +N+LI    K  + D A     EM E G+ P   TY   I+  
Sbjct: 476 RVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGY 535

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            E   +    + +  M   G++PN V  T L++ Y           C +G   +A +AFR
Sbjct: 536 IEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY-----------CKKGKVIEACSAFR 584

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G+         L+N   ++ +  +A  +   M+  G+ PDV +Y TL+    ++ 
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLG 644

Query: 641 KFHKVFSSY 649
              K  S +
Sbjct: 645 NMQKASSIF 653



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 151/368 (41%), Gaps = 47/368 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  L++   +N  +  A  +  +MR  G   D  +Y  +I   ++   +  +    ++ 
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA--SSIFD 654

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  +  + N ++ GF ++G+  KA   L    G G  P   TY  +I     SG
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSG 714

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL------- 367
              EA  +F+E+K  GL P +  Y  L+ G  ++  ++ A   + E    G         
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFETNEKGCASSSAPFN 773

Query: 368 --------------------------------PDEHTYSLLIDAYANAGRWESARIVLKE 395
                                           P++ TY+++ID     G  E+A+ +   
Sbjct: 774 ALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHH 833

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M+ ++  P    Y+ +L GY   G     F V  E+ ++G+EPD   Y+V+I+ F K   
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM 893

Query: 456 LHHAMAAFDRMLS-----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
              A+   D+M +     +G +    T   L+    K G  + AE++ E M    Y P +
Sbjct: 894 TTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDS 953

Query: 511 TTYNIMIN 518
           +T   +IN
Sbjct: 954 STVIELIN 961



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 142/402 (35%), Gaps = 104/402 (25%)

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSE--------------------------------- 360
           R   +  L+ GY++ G+L +A FV S                                  
Sbjct: 151 RVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWD 210

Query: 361 ----MERSGVLPDEHTYSLLIDAYANAGRWESARIVL---------------------KE 395
               M    V+ D  +Y +LI A+   G  + A+ VL                     K 
Sbjct: 211 VYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKS 270

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID------- 448
           M      P+   Y+ ++ G   +   +    +L EM S G+  D   Y+++ID       
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330

Query: 449 ----------------------------TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                                          K   +  A A FD M++ G+ P    + +
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI+  F+     +  EL  E+++R       TY   +  +      +    ++  M A G
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
             PNVV YTTL+  + Q  RF DA+  L           + MR  G+ P     NSLI  
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVL-----------KEMREQGIAPDTFCYNSLIIG 499

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             + ++  EA + L  M ENG KPD  TY   +   I   +F
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 206/459 (44%), Gaps = 16/459 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           +TYN L+ +  +    +K   L+ +M   G  C  + + Y++VI  LTR   ++ +   +
Sbjct: 205 VTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA--AE 262

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L + +   K +      N +I G    G   K        +  G+ P   TY A+I  L 
Sbjct: 263 LVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 321

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG    A+  F E++  GL P    YN+LL GY K G LK+A  +  ++ R+G+ P   
Sbjct: 322 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 381

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++ ID Y   G  E ARI+ +EM      PN   Y+ ++ G  +        +   EM
Sbjct: 382 TYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM 441

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G++PD   YN  I        +  A+   + ++ EGI  DT+T+N LI    K G  
Sbjct: 442 LSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNL 501

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A+EL  +M   G  P   TY  +I+   E+    + +++  NM + GLLP+ VT+T +
Sbjct: 502 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 561

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C  G    A   FR M  +G++P+ +  N LI+A     R   A 
Sbjct: 562 IHAY-----------CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 610

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
                M E GL  +  TYT L+    +V  +      Y 
Sbjct: 611 HHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYF 649



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 171/369 (46%), Gaps = 31/369 (8%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+ AL ++ R  +  AV EE+ + G++P    YN LL  ++K G     
Sbjct: 164 GVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKV 223

Query: 355 EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ EME   SG LP++ TY+++I      G  E A  +++ M +S  K +SF Y+ ++
Sbjct: 224 AMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS-KKASSFTYNPLI 282

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G   RG  ++ + +  EM++ G+ P    YN MI    +   +  A   F  M + G+ 
Sbjct: 283 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 342

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+L++ + K G    A  LF +++  G  P   TYNI I+        E+ + L
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402

Query: 533 LGNMRAQGLLPNVVTYTTLV--------------------------DIYGQSGRFDDAIE 566
              M  QG LPNV TYT L+                          D +  + R     E
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI--CAE 460

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            + G   +A+    V+  +G+    +  N LI+   +     +A  +   M  NGL+PD 
Sbjct: 461 LILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDC 520

Query: 627 VTYTTLMKA 635
           +TYT L+ A
Sbjct: 521 ITYTCLIHA 529



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 191/462 (41%), Gaps = 60/462 (12%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN +I+   R  DLE+A  L+  MR       F    L+   L R        ++K+Y
Sbjct: 242 VTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLAR------GCVKKVY 295

Query: 254 K---EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
               E+E + I       N +I G  ++G    A       + +GL P   TY +++   
Sbjct: 296 DLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGY 355

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             +G   EA  +F +L+ +GL P    YN  + GY ++G L++A  +  EM   G LP+ 
Sbjct: 356 CKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNV 415

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY++L+    N      AR    EM     +P+ F Y+  +      G+  R  ++ + 
Sbjct: 416 CTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREV 475

Query: 431 MKSSGVEPDTHFYNVMIDTFGK-------------------------YNCLHHAMA---- 461
           +   G+  DT  YN++I    K                         Y CL HA      
Sbjct: 476 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 535

Query: 462 ------AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
                  F+ M+S+G+ P  +T+  +I  + + G    A   F +M E G  P   TYN+
Sbjct: 536 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L    R +        M  +GL+ N  TYT L+D   + G ++DA+          
Sbjct: 596 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMR--------- 646

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
              +  M  +G+ P  L   +L+  F     D      ++Y+
Sbjct: 647 --FYFEMHQNGIHPDYLTHKALVKGF-----DGHVHHTIEYL 681



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 191/420 (45%), Gaps = 9/420 (2%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLE 210
           L K    ++Y  L + L+ A G  +K+Y+  L  + + + P  +TYNA+I    ++  +E
Sbjct: 269 LSKKASSFTYNPLITGLL-ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 327

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A    ++MR  G   D I Y+ ++    +   +  +LL  L+ ++    +       N 
Sbjct: 328 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL--LFGDLRRAGLAPTVLTYNI 385

Query: 271 VIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            I G+ + GD  +A R L    G  G  P   TY  ++    N      A   F+E+   
Sbjct: 386 RIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL+P   AYN  +   + +G +  A  +   +   G+  D  TY++LI      G  + A
Sbjct: 445 GLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 504

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           + +  +M  +  +P+   Y+ ++  + +RG  +   ++   M S G+ P    + V+I  
Sbjct: 505 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 564

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + +   L+ A   F +ML EG+EP+ IT+N LI    + GR   A   F EM ERG    
Sbjct: 565 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 624

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY ++I+   +   WED  R    M   G+ P+ +T+  LV   G  G     IE L+
Sbjct: 625 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVK--GFDGHVHHTIEYLD 682



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 25/206 (12%)

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           C    ++AF  M S G+ PD    N ++       R+D    + EEM + G  P   TYN
Sbjct: 149 CSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYN 208

Query: 515 IMINLLGEQERWEDVKRLLGNM--RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +++   ++ R + V  LL  M  R  G LPN VTY  ++    + G  ++A E +EG+ 
Sbjct: 209 TLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR 268

Query: 573 -DQAVNAFRV----------------------MRTDGLKPSNLALNSLINAFGEDQRDAE 609
             +  ++F                        M  +G+ P+ +  N++I+   +      
Sbjct: 269 LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 328

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKA 635
           A      M+  GL PDV+TY +L+  
Sbjct: 329 AQVKFAEMRAMGLLPDVITYNSLLNG 354



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 10/149 (6%)

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F EM   G  P     N ++  L +  RW+D+  +   M   G+ P++VTY TL+D + +
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR D     L+ +           R  G  P+++  N +I          EA  +++ M
Sbjct: 217 EGRKDKVAMLLKEMET---------RGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM 267

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +  K    TY  L+  L+      KV+
Sbjct: 268 RLSK-KASSFTYNPLITGLLARGCVKKVY 295



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y +  +  DA   L+  S   ++AFR M + G+ P     N ++ A  +  R  +  AV 
Sbjct: 135 YSKECKARDAT--LDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVH 192

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           + M + G++P +VTY TL+ + ++  +  KV
Sbjct: 193 EEMLQLGIEPSIVTYNTLLDSFLKEGRKDKV 223


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 218/465 (46%), Gaps = 18/465 (3%)

Query: 166  YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+I+IH    LGR  + +   LL + +  TP  ++Y+ +I+   R  +L+K   L+ KM+
Sbjct: 672  YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            Q G   +   Y  +I  L R  K+  +  ++ + E+    I  D  +   ++ GF K GD
Sbjct: 732  QKGLKPNSYTYGSIIGLLCRICKLAEA--EEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
               A +F        ++P   TY A+I+     G  +EA  +F E+   GL+P    +  
Sbjct: 790  IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L+ GY K G++KDA  V + M ++G  P+  TY+ LID     G  +SA  +L EM    
Sbjct: 850  LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             +PN F Y+ I+ G    G  +   +++ E +++G+  DT  Y  ++D + K   +  A 
Sbjct: 910  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                 ML +G++P  +T+N L++     G  +  E+L   M  +G  P  TT+N ++   
Sbjct: 970  EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +   +    +  +M ++G+ P+  TY  LV  +           C      +A   F+
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGH-----------CNARNMKEAWFLFQ 1078

Query: 581  VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             M+  G   S    + LI  F + ++  EA  +   M+ +GL  D
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 173/366 (47%), Gaps = 11/366 (3%)

Query: 269  NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            N VI    + G  ++A   L + +  G +P   +Y+ VI      G   +   + E++K+
Sbjct: 673  NIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQ 732

Query: 329  SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             GLKP +  Y +++    ++  L +AE   SEM   G+LPD   Y+ L+D +   G   +
Sbjct: 733  KGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRA 792

Query: 389  ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
            A     EM      P+   Y+ I++G+   G+     ++  EM   G+EPD   +  +++
Sbjct: 793  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852

Query: 449  TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             + K   +  A    + M+  G  P+ +T+ TLID   K G  D A EL  EM + G  P
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 509  CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               TYN ++N L +    E+  +L+G   A GL  + VTYTTL+D Y +SG  D A E L
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 569  EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                         M   GL+P+ +  N L+N F       +   +L +M   G+ P+  T
Sbjct: 973  TE-----------MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1021

Query: 629  YTTLMK 634
            +  L+K
Sbjct: 1022 FNCLVK 1027



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 7/409 (1%)

Query: 166  YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y  +I  L R  KL EA   F     Q + P  + Y  L+    +  D+  A     +M 
Sbjct: 742  YGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMH 801

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                  D + Y+ +I    +    D     KL+ E+ C  +E D     +++ G+ KAG 
Sbjct: 802  SRDITPDVLTYTAIISGFCQIG--DMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
               A R        G SP   TY  +I  L   G    A  +  E+ + GL+P    YN+
Sbjct: 860  IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            ++ G  K G +++A  +V E E +G+  D  TY+ L+DAY  +G  + A+ +L EM    
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             +P    ++ ++ G+   G  +   ++L  M + G+ P+   +N ++  +   N L  A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            A +  M S G+EPD  T+  L+  H        A  LF+EM+ +G+    +TY+++I   
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +++++ + + +   MR  GL  +   +    D   +  R D  ++ ++
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPID 1148



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK-MGYLKD 353
           G  P+   +      L   G   EA  VFE++   GL     + N  L    K       
Sbjct: 595 GSDPRV--FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V  E    GV  +  +Y+++I      GR   A  +L  ME+    P+   YS ++ 
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   GE  + ++++++MK  G++P+++ Y  +I    +   L  A  AF  M+ +GI P
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DTI + TL+D   K G    A + F EM  R   P   TY  +I+   +     +  +L 
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M  +GL P+++T+T L++ Y ++G   DA                          C E
Sbjct: 833 HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  D A      M   GL+P+    NS++N   +     EA  ++   +  GL  D VTY
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952

Query: 630 TTLMKALIR---VDKFHKVFSSYL 650
           TTLM A  +   +DK  ++ +  L
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEML 976



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 10/314 (3%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
            +T+  L++   +   ++ A  + + M Q G   + + Y+ +I  L +   +DS+  LL +
Sbjct: 845  ITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904

Query: 252  LYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            ++K      I L   +   N ++ G  K+G+  +A++ +G  +  GL+  T TY  ++ A
Sbjct: 905  MWK------IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 958

Query: 310  LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               SG   +A+ +  E+   GL+P    +N L+ G+   G L+D E +++ M   G+ P+
Sbjct: 959  YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018

Query: 370  EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              T++ L+  Y      ++A  + K+M     +P+   Y  ++ G+ +    +  + + +
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078

Query: 430  EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            EMK  G       Y+V+I  F K      A   FD+M  +G+  D   ++   D  +K  
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138

Query: 490  RYDRAEELFEEMQE 503
            R D   +  +E+ E
Sbjct: 1139 RPDTIVDPIDEIIE 1152


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G+   +     L +      + P   +Y   I    +    ++A  +++KM 
Sbjct: 233 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 292

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D I ++++IQ L    +I  +  + ++ +++    + D      ++  F   GD
Sbjct: 293 NEGCKPDVITHTVLIQVLCDAGRISDA--KDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 350

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   M      +  G +     Y AVI AL   GR  EA  +F+E+K+ G+ P   +YN+
Sbjct: 351 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 410

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K     DA  +   M+  G  P+ +T+ L I+ Y  +G    A    + M+   
Sbjct: 411 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 470

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+    + +L G    G      +V  E+K+ GV PDT  Y +MI    K +    A+
Sbjct: 471 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 530

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+     PD +  N+LID  +K GR D A  +F +++E    P   TYN ++  L
Sbjct: 531 KIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGL 590

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G + + ++V  LL  M      PN++TY T++D   ++G  +DA++ L            
Sbjct: 591 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS---------- 640

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            M T G  P   + N++I    +++R  EAF++   MK+  L PD  T  T++ + +++
Sbjct: 641 -MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKI 697



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 231/503 (45%), Gaps = 22/503 (4%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  L   L+ + G   +  E + +     + P   TY+ L+ A  +  D+E  L L+ 
Sbjct: 196 YTYNGLVYFLVKS-GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR 254

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M   G   +  +Y++ I+ L +  + D +  +L K+  E  C    +   +L  V+   
Sbjct: 255 EMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE-GCKPDVITHTVLIQVLCDA 313

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +  DA     F  M +     P   TY  ++    ++G +     ++  +K  G     
Sbjct: 314 GRISDAKDV--FWKMKKS-DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AY A++    ++G + +A  +  EM++ G++P++++Y+ LI  +  A R+  A  + K 
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 430

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M++   KPN + +   +  Y   GE  +  Q  + MKS G+ PD    N ++    K   
Sbjct: 431 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 490

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A   F  + + G+ PDTIT+  +I C  K  ++D A ++F +M E    P     N 
Sbjct: 491 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 550

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L +  R ++  R+   ++   L P   TY TL+   G+ G+  + +  LE      
Sbjct: 551 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE------ 604

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M      P+ +  N++++   ++    +A  +L  M   G  PD+ +Y T++  
Sbjct: 605 -----EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 659

Query: 636 LIRVDKFHKVFSSYLFFNIYKML 658
           L++ +++++ FS  +F  + K+L
Sbjct: 660 LVKEERYNEAFS--IFCQMKKVL 680



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 210/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+   GR   + E F + QRQ  +    T+ A+         L  A   +  M++ G   
Sbjct: 134 LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 193

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ ++  L ++   D   L+ +Y+ +  D +    +  + ++V F K  D    + 
Sbjct: 194 NAYTYNGLVYFLVKSG-FDREALE-VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 251

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  +++  G KP    +  L++   
Sbjct: 252 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 311

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G + DA+ V  +M++S   PD  TY  L+D + + G  +S   +   M+      N  
Sbjct: 312 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVV 371

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G      ++  EMK  G+ P+ + YN +I  F K +    A+  F  M
Sbjct: 372 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 431

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G +P+  T    I+ + K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 432 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 491

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++ +F           D+AV  F  M  + 
Sbjct: 492 GMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF-----------DEAVKIFYDMIENN 540

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LA+NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 600



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 12/365 (3%)

Query: 270 DVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           DVI     A   ++A+ RF   A+   ++  TA+   ++  +   GR  +   VF+ ++ 
Sbjct: 94  DVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQR 153

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             +K     + A+  G    G L+ A   +  M+ +G++ + +TY+ L+     +G    
Sbjct: 154 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 213

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  V + M V    P+   YS ++  +  R + +    +L+EM++ GV+P+ + Y + I 
Sbjct: 214 ALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 273

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             G+      A     +M +EG +PD IT   LI      GR   A+++F +M++    P
Sbjct: 274 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 333

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +++  G+    + V  +   M+A G   NVV YT ++D   Q GR  +A+E  
Sbjct: 334 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-- 391

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M+  G+ P   + NSLI+ F +  R  +A  + ++M  +G KP+  T
Sbjct: 392 ---------MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 442

Query: 629 YTTLM 633
           +   +
Sbjct: 443 HVLFI 447



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 208/515 (40%), Gaps = 56/515 (10%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
           P  + ++++   CS  S  D A  +   + ++N C    L  + LI  L   GR ++ + 
Sbjct: 508 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWR 566

Query: 182 AFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   +   L P   TYN L++   R   +++ ++L+ +M    Y  + I Y+ ++  L 
Sbjct: 567 IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 626

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   ++ +L                     D++      G                  P 
Sbjct: 627 KNGAVNDAL---------------------DMLYSMTTKG----------------CIPD 649

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            ++Y  VI  L    R  EA ++F ++K+  L P       +L  +VK+G +K+A  ++ 
Sbjct: 650 LSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIK 708

Query: 360 E-MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           +   + G   D  +   L++        E +    + +  S    + F    ++     +
Sbjct: 709 DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQ 768

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            +     +++K+ KS GV   T  YN +I      N +  A   F  M   G  PD  T+
Sbjct: 769 KKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 828

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N L+D   K  R +   ++ EEM  +GY     TYN +I+ L +  R E    L  N+ +
Sbjct: 829 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 888

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           QG  P   TY  L+D   ++GR +DA            N F  M   G K +    N L+
Sbjct: 889 QGFSPTPCTYGPLLDGLLKAGRIEDA-----------ENLFNEMLEYGCKANCTIYNILL 937

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           N         +   + Q M + G+ PD+ +YT ++
Sbjct: 938 NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 18/354 (5%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVSEM 361
           VI AL ++    EA    E  + +  KPR    T + N +L+     G + D   V   M
Sbjct: 95  VIHALRSADGPAEA---LERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVM 151

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +R  V  +  T++ +       G   SA + L  M+ +    N++ Y+ ++      G  
Sbjct: 152 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 211

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +   +V + M   GV P    Y+V++  FGK   +   +     M + G++P+  ++   
Sbjct: 212 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 271

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    +  R+D A  +  +M+  G  P   T+ ++I +L +  R  D K +   M+    
Sbjct: 272 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 331

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+ VTY TL+D +G +G            S   +  +  M+ DG   + +A  ++I+A 
Sbjct: 332 KPDRVTYITLLDKFGDNGD-----------SQSVMEIWNAMKADGYNDNVVAYTAVIDAL 380

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
            +  R  EA  +   MK+ G+ P+  +Y +L+   ++ D+F      +   +I+
Sbjct: 381 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH 434



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 183/448 (40%), Gaps = 74/448 (16%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
           D A+ +   L++ NL    +  Y+ L+  LGR  K+ E   L +        P  +TYN 
Sbjct: 562 DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 620

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEI 256
           ++    +N  +  AL+++  M   G   D  +Y+ VI  L +  + +   S+  ++ K +
Sbjct: 621 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 680

Query: 257 ECD------------KIEL-------------------DGQLLNDVIVGFAKAGDASKAM 285
             D            KI L                   D    + ++ G  K     K++
Sbjct: 681 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 740

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
            F  +    G++        +I  L    + +EA  + ++ K  G+  +T  YN+L+ G 
Sbjct: 741 EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 800

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           V    +  AE + +EM+  G  PDE TY+LL+DA   + R E       EM         
Sbjct: 801 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIE-------EM--------- 844

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
                               +V +EM   G E     YN +I    K   L  A+  +  
Sbjct: 845 -------------------LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 885

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ++S+G  P   T+  L+D   K GR + AE LF EM E G     T YNI++N       
Sbjct: 886 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 945

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            E V  L  +M  QG+ P++ +YT ++D
Sbjct: 946 TEKVCHLFQDMVDQGINPDIKSYTIIID 973


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 149/636 (23%), Positives = 266/636 (41%), Gaps = 78/636 (12%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           F  LL  +S  +   SAS L  S    NR+  +   S +  P+   +++L         +
Sbjct: 54  FNRLLTVVSR-ARCSSASELVVSL--FNRMIREC--SVKVAPSSCTYTILIGCFCRMGRL 108

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ------RLTPLTYN 197
              +A    + K     +  +++  L+  L  ++++ EA  +  R+       L  ++YN
Sbjct: 109 KHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYN 168

Query: 198 ALISACARNDDLEKALNLMSKMRQDG---YHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            L+         E+AL LM  M  DG   +  + + Y+ VI  L +   +D +  + +++
Sbjct: 169 ILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA--KGVFQ 226

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    +  +      +I G+   G   + ++ L      GL P    YA ++  L  +G
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNG 286

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  +F+ L   G+KP    Y  LL GY   G L +    +  M R+GV PD H ++
Sbjct: 287 RCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFN 346

Query: 375 LLIDAYANA-----------------------------------GRWESARIVLKEMEVS 399
           ++ +AYA                                     GR + A +   +M   
Sbjct: 347 IMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINE 406

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+ F++S ++ G     +W++  ++  E+   G+  +  F+N+++    +   +  A
Sbjct: 407 GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               D ML   + PD I++NTL+D H   GR D A +L + M   G  P   TYN +++ 
Sbjct: 467 QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHG 526

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
             +  R +D   L   M  +GL P VVTY T++    Q GRF +A E             
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCD 586

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C     D+A   F+ + +  L+     +N +I A  +  R  +A  +  
Sbjct: 587 IYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFA 646

Query: 616 YMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
            +   GL PDV TY  + + LI+   +++  ++FS+
Sbjct: 647 TISAYGLVPDVETYRLIAENLIKEGSLEELDELFSA 682



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 219/497 (44%), Gaps = 55/497 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCD-FINYSLVIQSLTRTNKID--SSLLQK 251
           TY  LI    R   L+        + + G+  +  + +  +++ L    ++D  + +L +
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLR 153

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---LSPKTATYAAVIT 308
              E  C    L+    N ++ G      A +A+  + M    G    +P   TY  VI 
Sbjct: 154 RMPEFGC---TLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVID 210

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  +     A+ VF+ + + G++P    Y  L+ GY+  G  K+   ++ EM   G+ P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQP 270

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D   Y++L+D     GR   AR +   +     KP+  IY  +L GY   G        L
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M  +GV PD H +N+M + + K   +  AM  FD+M  + + P  + +  LID   K 
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 489 GRYD-----------------------------------RAEELFEEMQERGYFPCTTTY 513
           GR D                                   +AE+LF E+ ++G       +
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           NI++  L  + R  + +RL+  M    + P+V++Y TLVD +  +GR D+A + L+    
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD---- 506

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                  VM + GLKP     N+L++ + + +R  +A+++ + M   GL P VVTY T++
Sbjct: 507 -------VMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559

Query: 634 KALIRVDKFHKVFSSYL 650
             L ++ +F +    YL
Sbjct: 560 HGLFQIGRFCEAKELYL 576



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 180/393 (45%), Gaps = 7/393 (1%)

Query: 165 LYSILIHALGRSEKLYE--AFL-LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y IL+H       L E  +FL L  R  ++P    +N + +A A+   +++A+++  KM
Sbjct: 309 IYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM 368

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ       +NY  +I +L +  ++D ++L+  + ++  + +  D  + + ++ G     
Sbjct: 369 RQQWLSPGVVNYGALIDALCKLGRVDDAVLK--FNQMINEGVTPDIFVFSSLVYGLCTVD 426

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              KA +        G+    A +  ++  L   GR +EA+ + + +    ++P   +YN
Sbjct: 427 KWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYN 486

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+   G + +A  ++  M   G+ PDE TY+ L+  Y  A R + A  + +EM + 
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMK 546

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ IL G    G +    ++   M ++  + D + Y ++++   + N +  A
Sbjct: 547 GLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEA 606

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  + S+ ++ D  T N +I    K GR + A +LF  +   G  P   TY ++   
Sbjct: 607 FKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAEN 666

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L ++   E++  L   M   G  PN      LV
Sbjct: 667 LIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 7/226 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           E  Y+ L+H   ++ ++ +A+ L +    + LTP  +TYN ++    +     +A  L  
Sbjct: 517 EFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYL 576

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M  +   CD   Y++++  L R N +D +   K+++ +    ++LD   +N +I    K
Sbjct: 577 NMINNRRKCDIYTYTIILNGLCRNNFVDEAF--KMFQSLCSKDLQLDIFTINIMIGALLK 634

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    AM         GL P   TY  +   L   G   E + +F  ++E+G  P ++ 
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            NAL++  +  G +  A   +S+++      +  T S+LI  Y+ A
Sbjct: 695 LNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRA 740



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 9/294 (3%)

Query: 165 LYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            ++IL+  L R  ++ EA      +L    R   ++YN L+        +++A  L+  M
Sbjct: 449 FFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVM 508

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   D   Y+ ++    +  +ID +    L++E+    +       N ++ G  + G
Sbjct: 509 VSIGLKPDEFTYNTLLHGYCKARRIDDA--YSLFREMLMKGLTPGVVTYNTILHGLFQIG 566

Query: 280 DASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              +A   +L M           TY  ++  L  +    EA  +F+ L    L+      
Sbjct: 567 RFCEAKELYLNMINN-RRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTI 625

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++   +K G  +DA  + + +   G++PD  TY L+ +     G  E    +   ME 
Sbjct: 626 NIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           +   PNS + + ++     RG+  R    L ++       +    +++I  + +
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSR 739


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 14/450 (3%)

Query: 198 ALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +L+ A  R DDL +A  +  KM +++    + + YS++I  L    +++ +   +L +E+
Sbjct: 211 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAF--QLKQEM 268

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                +   +    +I      G   KAM+ L         P   TY  +I  L   G+ 
Sbjct: 269 VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 328

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  VF ++ + GL P    +NAL+ GY K G++  A  ++S ME+    P+  TY+ L
Sbjct: 329 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ++      +   A ++L+ +  +   P+   Y+ ++ G+   G+    F +   M S+G+
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 448

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EPD   +  +ID   K   L  A      M+ +GI  D +T+  LID H K G+      
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LFE M E        T+N  ++ LG+  +  +   +LG M   GL+P+VVT+T L++ + 
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++G    +++ LE            M+  G  P+      +IN    + R  EA  +L  
Sbjct: 569 RAGETALSLKMLER-----------MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           M   G+ P+  TY  L+KA ++  +  + F
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 647



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 210/463 (45%), Gaps = 22/463 (4%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALI 200
           A+ V   + K   C    + YSILIH L  + +L EAF L Q       + +  TY  LI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIEC 258
            A       +KA+ ++ +M       +   Y+++I  L R  KI+  + + +K+ K   C
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 344

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I       N +I G+ K G    A + L + +     P   TY  ++  L    ++ +
Sbjct: 345 PGI----ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +   + ++GL P    YN L+ G+ K G L  A  + + M  +G+ PD  T++ LID
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                GR E A  +L  M       +   ++ ++ G+   G+ +    + + M  +    
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
             H +N  +D  GK   L+ A A   +M+  G+ P  +T   LI+ H + G    + ++ 
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E M++ G  P   TY I+IN L    R E+ + +L +M + G+ PN  TY  LV  + ++
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           GR D A + +             M  +G +P++   ++L++ F
Sbjct: 641 GRLDRAFQIVS-----------TMVKNGCQPNSHIYSALLSGF 672



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 166/419 (39%), Gaps = 70/419 (16%)

Query: 260 KIELDGQLLNDVIVGFAKAG----------DASKAMRFLGMAQG---VGLSPKTATYAAV 306
           +I+L G L++  + G A+              +  ++ +G   G   +G       Y+ +
Sbjct: 83  RIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTL 142

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L+       A  V+  +   G       Y  ++    K G+++ AE    ++ R G 
Sbjct: 143 LMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 202

Query: 367 LPDEHTYSLLIDAYANAGR---WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             D H  + L+   AN  R    E+ R+  K  +  + +PNS  YS ++ G  + G  + 
Sbjct: 203 GLDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 260

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            FQ+ +EM                                   + +G +P T T+  LI 
Sbjct: 261 AFQLKQEM-----------------------------------VEKGCQPSTRTYTVLIK 285

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  D+A ++ +EM  +   P   TY I+I+ L  + + E+   +   M   GL P
Sbjct: 286 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 345

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            ++T+  L++ Y           C EG    A     VM     KP+    N L+     
Sbjct: 346 GIITFNALINGY-----------CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
             +  +AF +L+ + +NGL PD VTY  L      VD F K     + FNI+  ++ +G
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNIL------VDGFCKEGQLNMAFNIFNSMNSAG 447



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/470 (20%), Positives = 183/470 (38%), Gaps = 97/470 (20%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASS----PSSLNRVEFKLAESYRAVPAPLWHS 131
            L+   + FT L++ L +    E A+ +  S      SL+ V F               +
Sbjct: 447 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT--------------A 492

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQRQR 190
           L+   C    + D+ +   + ++  N C +    ++  + ALG+  KL EA  +L +  +
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVE--NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 550

Query: 191 --LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             L P  +T+  LI    R  +   +L ++ +M+Q G   +   Y+++I  L    +++ 
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE- 609

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                               +A   L      G+SP   TYA +
Sbjct: 610 ------------------------------------EAETILFSMSSFGVSPNHFTYAVL 633

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           + A   +GR   A  +   + ++G +P +  Y+ALL G+V    L +       +  +G 
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV----LSNTAIGARALSSTGD 689

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           L D  + S    +  N     S+  V + M+V HA                        +
Sbjct: 690 L-DARSLS----SEENDNNCLSSH-VFRLMDVDHA-----------------------LK 720

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  E+K  GV P    YN ++    K   +  A      M+  G+ PD    +++I+ + 
Sbjct: 721 IRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYC 778

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           K  +YD   E  + + +  + P   +Y  +I+ L  + R ++ ++L+ ++
Sbjct: 779 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 828


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 237/535 (44%), Gaps = 39/535 (7%)

Query: 144 DLAYAVVSWLQKHNLCYSYELL-----YSILIHALGRSEKLYEAFLLSQRQR-----LTP 193
           D+A +V SW+++      +E +      +++I  LG+  K+  A  +    R     L  
Sbjct: 161 DMAMSVFSWVRERE---DFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDV 217

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
             Y +LI+A A N     A+ +  KM ++G     I Y++++    +   +  S +  L 
Sbjct: 218 YAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMG-MPWSKISGLV 276

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             ++   +  D    N +I    +     +A +     +  G SP   T+  ++     S
Sbjct: 277 HGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS 336

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  EA  V +E++ SG  P    YN+L+  Y + G L++A  +  +M   G+ PD  TY
Sbjct: 337 RRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTY 396

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+  +  AG  E A  +  EM  +  KPN   ++ ++  + +RG +    +V +E++ 
Sbjct: 397 TTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEI 456

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
               PD   +N ++  FG+          F  M   G  P+  T+NTLI  + +CG + +
Sbjct: 457 CNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQ 516

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  +++ M E G  P  ++YN ++  L     WE  +++   M+     PN +TY +L+ 
Sbjct: 517 AMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLH 576

Query: 554 IYGQSGRFDD----AIECLEGLSD--------------------QAVNAFRVMRTDGLKP 589
            Y  S   +     A E   GL++                    +  +AF  ++  G  P
Sbjct: 577 AYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SP 635

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               LN++I  +G  Q  A+A  +L +M E+G  P + TY +LM    R + F +
Sbjct: 636 DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFER 690



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 220/476 (46%), Gaps = 19/476 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G+S +  EA  + +    +      +TYN+LISA AR+  L +A+ L  
Sbjct: 323 KVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKD 382

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   D   Y+ ++    +    + ++  +++ E+     + +    N +I     
Sbjct: 383 QMVEKGIKPDVFTYTTLLSGFEKAGMDEPAM--RIFGEMRAAGCKPNICTFNALIKMHGN 440

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M+     +    +P   T+  ++     +G   E   VF+E+K +G  P    
Sbjct: 441 RGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDT 500

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L+  Y + G  + A  V   M  +GV PD  +Y+ ++ A A  G WE +  V  EM+
Sbjct: 501 FNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMK 560

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN   Y  +L  Y +  E +R   + +E+ S   EP       ++    K + L 
Sbjct: 561 DGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLM 620

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF+ +  +G  PD  T N +I  + +     +A E+   M E G+ P   TYN ++
Sbjct: 621 ETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLM 679

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +    E +E  + +L  + A+GL P++++Y T++  Y ++GR  DA             
Sbjct: 680 YMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDA-----------SR 728

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            F  M+T GL P  +  N+ + ++  D    +A  V++YM ++G K +  TY +++
Sbjct: 729 IFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIV 784



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 220/473 (46%), Gaps = 19/473 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R     EA  + +  +L+      +T+N L+    ++   ++A+ ++ +M 
Sbjct: 291 YNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEME 350

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+    + Y+ +I +  R   +  ++  +L  ++    I+ D      ++ GF KAG 
Sbjct: 351 FSGFSPSIVTYNSLISAYARDGLLREAM--ELKDQMVEKGIKPDVFTYTTLLSGFEKAGM 408

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AMR  G  +  G  P   T+ A+I    N GR  E   VFEE++     P    +N 
Sbjct: 409 DEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNT 468

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL  + + G   +   V  EM+R+G +P+  T++ LI AY+  G ++ A  V K M  + 
Sbjct: 469 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG 528

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ +LA     G W+++ +V  EMK    +P+   Y  ++  +     +    
Sbjct: 529 VTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMH 588

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + + S   EP  +   TL+  + KC      E  FEE++++G  P  +T N MI + 
Sbjct: 589 TLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMIAIY 647

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G ++       +L  M   G  P++ TY +L+ ++ +S  F+ + E L           +
Sbjct: 648 GRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL-----------K 696

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            +   GLKP  ++ N++I A+  + R  +A  +  YMK  GL PDV+TY T +
Sbjct: 697 EILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFV 749



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 12/347 (3%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A +IT L   G+   A ++   L++ G      AY +L+  Y   G  +DA  V  +ME 
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245

Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G  P   TY+++++ Y   G  W     ++  M+ S   P+ + Y+ +++  R    ++
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              QV +EMK SG  PD   +N ++D +GK      AM     M   G  P  +T+N+LI
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLI 365

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + + G    A EL ++M E+G  P   TY  +++   +    E   R+ G MRA G  
Sbjct: 366 SAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCK 425

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+ T+  L+ ++G  GRF + ++  E +  +  N           P  +  N+L+  FG
Sbjct: 426 PNICTFNALIKMHGNRGRFAEMMKVFEEI--EICNC---------APDIVTWNTLLAVFG 474

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  D+E   V + MK  G  P+  T+ TL+ A  R   F +  + Y
Sbjct: 475 QNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVY 521


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G+   +     L +      + P   +Y   I    +    ++A  +++KM 
Sbjct: 198 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 257

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D I ++++IQ L    +I  +  + ++ +++    + D      ++  F   GD
Sbjct: 258 NEGCKPDVITHTVLIQVLCDAGRISDA--KDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 315

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   M      +  G +     Y AVI AL   GR  EA  +F+E+K+ G+ P   +YN+
Sbjct: 316 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 375

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K     DA  +   M+  G  P+ +T+ L I+ Y  +G    A    + M+   
Sbjct: 376 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 435

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+    + +L G    G      +V  E+K+ GV PDT  Y +MI    K +    A+
Sbjct: 436 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 495

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+     PD +  N+LID  +K GR D A  +F +++E    P   TYN ++  L
Sbjct: 496 KIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGL 555

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G + + ++V  LL  M      PN++TY T++D   ++G  +DA++ L            
Sbjct: 556 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS---------- 605

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            M T G  P   + N++I    +++R  EAF++   MK+  L PD  T  T++ + +++
Sbjct: 606 -MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKI 662



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 231/503 (45%), Gaps = 22/503 (4%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  L   L+ + G   +  E + +     + P   TY+ L+ A  +  D+E  L L+ 
Sbjct: 161 YTYNGLVYFLVKS-GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR 219

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M   G   +  +Y++ I+ L +  + D +  +L K+  E  C    +   +L  V+   
Sbjct: 220 EMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE-GCKPDVITHTVLIQVLCDA 278

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +  DA     F  M +     P   TY  ++    ++G +     ++  +K  G     
Sbjct: 279 GRISDAKDV--FWKMKKS-DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AY A++    ++G + +A  +  EM++ G++P++++Y+ LI  +  A R+  A  + K 
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 395

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M++   KPN + +   +  Y   GE  +  Q  + MKS G+ PD    N ++    K   
Sbjct: 396 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 455

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A   F  + + G+ PDTIT+  +I C  K  ++D A ++F +M E    P     N 
Sbjct: 456 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 515

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L +  R ++  R+   ++   L P   TY TL+   G+ G+  + +  LE      
Sbjct: 516 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE------ 569

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M      P+ +  N++++   ++    +A  +L  M   G  PD+ +Y T++  
Sbjct: 570 -----EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624

Query: 636 LIRVDKFHKVFSSYLFFNIYKML 658
           L++ +++++ FS  +F  + K+L
Sbjct: 625 LVKEERYNEAFS--IFCQMKKVL 645



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 210/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+   GR   + E F + QRQ  +    T+ A+         L  A   +  M++ G   
Sbjct: 99  LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 158

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ ++  L ++   D   L+ +Y+ +  D +    +  + ++V F K  D    + 
Sbjct: 159 NAYTYNGLVYFLVKSG-FDREALE-VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 216

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  +++  G KP    +  L++   
Sbjct: 217 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 276

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G + DA+ V  +M++S   PD  TY  L+D + + G  +S   +   M+      N  
Sbjct: 277 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVV 336

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G      ++  EMK  G+ P+ + YN +I  F K +    A+  F  M
Sbjct: 337 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 396

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G +P+  T    I+ + K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 397 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 456

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++ +F           D+AV  F  M  + 
Sbjct: 457 GMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF-----------DEAVKIFYDMIENN 505

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LA+NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 506 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 565



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 2/368 (0%)

Query: 197  NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            ++L+    +   +EK++     +   G   D      +I+ L +  K   +   +L K+ 
Sbjct: 689  HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA--HELVKKF 746

Query: 257  ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
            +   + L   L N +I G         A       + +G  P   TY  ++ A+  S R 
Sbjct: 747  KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRI 806

Query: 317  IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             E   V EE+   G +     YN ++ G VK   L+ A  +   +   G  P   TY  L
Sbjct: 807  EEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPL 866

Query: 377  IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
            +D    AGR E A  +  EM     K N  IY+ +L G+R  G  ++   + ++M   G+
Sbjct: 867  LDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 926

Query: 437  EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             PD   Y ++IDT  K   L+  +  F ++L  G+EPD IT+N LID   K  R + A  
Sbjct: 927  NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 986

Query: 497  LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
            LF EMQ++G  P   TYN +I  LG+  +  +  ++   +  +G  PNV TY  L+  Y 
Sbjct: 987  LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYS 1046

Query: 557  QSGRFDDA 564
             SG  D A
Sbjct: 1047 VSGSTDSA 1054



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 229/530 (43%), Gaps = 50/530 (9%)

Query: 144  DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
            D A+ +   L++ NL    +  Y+ L+  LGR  K+ E   L +        P  +TYN 
Sbjct: 527  DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585

Query: 199  LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEI 256
            ++    +N  +  AL+++  M   G   D  +Y+ VI  L +  + +   S+  ++ K +
Sbjct: 586  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 645

Query: 257  ECD------------KIEL-------------------DGQLLNDVIVGFAKAGDASKAM 285
              D            KI L                   D    + ++ G  K     K++
Sbjct: 646  IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 705

Query: 286  RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             F  +    G++        +I  L    + +EA  + ++ K  G+  +T  YN+L+ G 
Sbjct: 706  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 765

Query: 346  VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            V    +  AE + +EM+  G  PDE TY+LL+DA   + R E    V +EM     +   
Sbjct: 766  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 825

Query: 406  FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              Y+ I++G       ++   +   + S G  P    Y  ++D   K   +  A   F+ 
Sbjct: 826  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885

Query: 466  MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
            ML  G + +   +N L++ H   G  ++   LF++M ++G  P   +Y I+I+ L +  +
Sbjct: 886  MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 945

Query: 526  WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
              D       +   GL P+++TY  L+D  G+S R            ++AV+ F  M+  
Sbjct: 946  LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL-----------EEAVSLFNEMQKK 994

Query: 586  GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            G+ P+    NSLI   G+  + AEA  + + +   G KP+V TY  L++ 
Sbjct: 995  GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1044



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/512 (23%), Positives = 221/512 (43%), Gaps = 26/512 (5%)

Query: 129  WHSLLKNLCSS---NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-- 183
            ++++L  LC +   N ++D+ Y++ +       C      Y+ +I+ L + E+  EAF  
Sbjct: 583  YNTILDCLCKNGAVNDALDMLYSMTT-----KGCIPDLSSYNTVIYGLVKEERYNEAFSI 637

Query: 184  LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTR 240
                ++ L P   T   ++ +  +   +++AL+++     Q G   D  +   +++ + +
Sbjct: 638  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 241  TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
               I+ S+  +  + I    I LD   L  +I    K   A +A   +   +  G+S KT
Sbjct: 698  KAGIEKSI--EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 755

Query: 301  ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
              Y ++I  L +      AE +F E+KE G  P    YN LL    K   +++   V  E
Sbjct: 756  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 815

Query: 361  MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            M R G      TY+ +I     + R E A  +   +      P    Y  +L G    G 
Sbjct: 816  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875

Query: 421  WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +    +  EM   G + +   YN++++              F  M+ +GI PD  ++  
Sbjct: 876  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 935

Query: 481  LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            +ID   K G+ +     F ++ E G  P   TYN++I+ LG+ +R E+   L   M+ +G
Sbjct: 936  IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 995

Query: 541  LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            ++PN+ TY +L+   G++G+           + +A   +  + T G KP+    N+LI  
Sbjct: 996  IVPNLYTYNSLILHLGKAGK-----------AAEAGKMYEELLTKGWKPNVFTYNALIRG 1044

Query: 601  FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +        A+A    M   G  P+  TY  L
Sbjct: 1045 YSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 12/365 (3%)

Query: 270 DVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           DVI     A   ++A+ RF   A+   ++  TA+   ++  +   GR  +   VF+ ++ 
Sbjct: 59  DVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQR 118

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             +K     + A+  G    G L+ A   +  M+ +G++ + +TY+ L+     +G    
Sbjct: 119 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 178

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  V + M V    P+   YS ++  +  R + +    +L+EM++ GV+P+ + Y + I 
Sbjct: 179 ALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 238

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             G+      A     +M +EG +PD IT   LI      GR   A+++F +M++    P
Sbjct: 239 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 298

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +++  G+    + V  +   M+A G   NVV YT ++D   Q GR  +A+E  
Sbjct: 299 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-- 356

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M+  G+ P   + NSLI+ F +  R  +A  + ++M  +G KP+  T
Sbjct: 357 ---------MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 407

Query: 629 YTTLM 633
           +   +
Sbjct: 408 HVLFI 412



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 225/532 (42%), Gaps = 23/532 (4%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
           P  + ++++   CS  S  D A  +   + ++N C    L  + LI  L   GR ++ + 
Sbjct: 473 PDTITYTMMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWR 531

Query: 182 AFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   +   L P   TYN L++   R   +++ ++L+ +M    Y  + I Y+ ++  L 
Sbjct: 532 IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 591

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   ++ +L   LY       I  D    N VI G  K    ++A       + V L P 
Sbjct: 592 KNGAVNDAL-DMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 648

Query: 300 TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVK-MGYLKDAEFV 357
            AT   ++ +    G   EA  + ++   + G K    + ++L++G +K  G  K  EF 
Sbjct: 649 YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 708

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
              +  SG+  D+     LI       +   A  ++K+ +       + +Y+ ++ G  D
Sbjct: 709 -EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVD 767

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                    +  EMK  G  PD   YN+++D  GK   +   +   + M  +G E   +T
Sbjct: 768 ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 827

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NT+I    K  R ++A +L+  +  +G+ P   TY  +++ L +  R ED + L   M 
Sbjct: 828 YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 887

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G   N   Y  L++ +  +G  +      + + DQ +N           P   +   +
Sbjct: 888 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN-----------PDIKSYTII 936

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           I+   +  +  +     + + E GL+PD++TY  L+  L +  +  +  S +
Sbjct: 937 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 988



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 18/354 (5%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVSEM 361
           VI AL ++    EA    E  + +  KPR    T + N +L+     G + D   V   M
Sbjct: 60  VIHALRSADGPAEA---LERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVM 116

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +R  V  +  T++ +       G   SA + L  M+ +    N++ Y+ ++      G  
Sbjct: 117 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 176

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +   +V + M   GV P    Y+V++  FGK   +   +     M + G++P+  ++   
Sbjct: 177 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 236

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    +  R+D A  +  +M+  G  P   T+ ++I +L +  R  D K +   M+    
Sbjct: 237 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+ VTY TL+D +G +G            S   +  +  M+ DG   + +A  ++I+A 
Sbjct: 297 KPDRVTYITLLDKFGDNGD-----------SQSVMEIWNAMKADGYNDNVVAYTAVIDAL 345

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
            +  R  EA  +   MK+ G+ P+  +Y +L+   ++ D+F      +   +I+
Sbjct: 346 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH 399


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/564 (23%), Positives = 269/564 (47%), Gaps = 35/564 (6%)

Query: 87  LLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAP-LWHSLLKNLCSSNSSIDL 145
           LL  L E  + ++A  + ++  +L R +F         P P ++  +++ L  +  ++DL
Sbjct: 44  LLTALREQPDPDAALRMLNA--ALARDDF--------APGPEVYEEIIRKL-GAVGALDL 92

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRL-----TPLTYN 197
              +V+ +++        +++S L    G  ++L++     +L+Q Q L       + YN
Sbjct: 93  MKVLVAEMRREGHQVKLGVVHSFLDSYEG--QQLFDDAVDLILNQLQPLFGIQADTVVYN 150

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            L++       ++   ++ S+M   G   D + ++ ++++L R +++ +++L  + +E+ 
Sbjct: 151 HLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL--MLEEMS 208

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      ++ GF + G    A+R       +G S    T   +I      GR  
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A    ++    G +P    YN  + G  +  ++  A  V+  M + G  PD  TY++++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ E A+ +L +M      P+   ++ ++A        +    + +++   GV 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD + +N++I+   K    H A+  F+ M + G  PD +T+NTLID     G+  +A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            ++M+  G    T TYN +I+ L ++ R E+ + +   M  QG+  N +T+ TL+D   +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             + DDA     GL +Q       M ++GL+P+N+  NS++  + +     +A  +L+ M
Sbjct: 509 DKKIDDAF----GLINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
             NG + DVVTY TL+  L +  +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGR 581



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 229/505 (45%), Gaps = 33/505 (6%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSK 218
           Y  L ++L+   G   KL E+       R + P  +T+N L+ A  R   +  A+ ++ +
Sbjct: 149 YNHLLNVLVE--GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 206

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           M   G   D   ++ ++Q       I+++L ++    E+ C   ++    +N +I G+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT---VNVLINGYCK 263

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A+ ++      G  P   TY   +  L  +     A  V + + + G  P    
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++    K G L++A+ ++++M   G LPD  T++ LI A     R E A  + +++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+ + ++ ++      G+     ++ +EMK+SG  PD   YN +ID       L 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M S G    TIT+NT+ID   K  R + AEE+F++M  +G      T+N +I
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           + L + ++ +D   L+  M ++GL PN +TY +++  Y + G    A + LE        
Sbjct: 504 DGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 570 ----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                           G +  A+   R MR  G++P+  A N ++ +        +A ++
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M E G  PD +TY  + + L R
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++  T  YN LL   V+   +K  E V SEM   G+ PD  T++ L+ A   A +  +A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L+EM      P+   ++ ++ G+ + G  +   +V   M   G        NV+I+ 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A+    + +++G EPD IT+NT ++   +      A ++ + M + G+ P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI++N L +  + E+ K +L  M  +G LP++ T+ TL+           A  C  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI-----------AALCTG 369

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              ++A++  R +   G+ P     N LINA  +      A  + + MK +G  PD VTY
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 630 TTLMKALIRVDKFHKVF 646
            TL+  L  + K  K  
Sbjct: 430 NTLIDNLCSLGKLGKAL 446



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
           K++ C   E+ Y+ LI  L    KL +A  L +    T      +TYN +I    +   +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L +  KID +    L  ++  + ++ +    N
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF--GLINQMISEGLQPNNITYN 535

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  V   ++  
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G++P  KAYN +L+   +   ++DA  +  EM   G  PD  TY ++       G
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 10/262 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L+ NLCS    +  A  ++  ++    C    + Y+ +I  L +  ++ EA  +  +
Sbjct: 429 YNTLIDNLCSL-GKLGKALDLLKDMESTG-CPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             L       +T+N LI    ++  ++ A  L+++M  +G   + I Y+ ++    +   
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I  +    + + +  +  E+D      +I G  KAG    A++ L   +  G+ P    Y
Sbjct: 547 IKKA--ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAY 604

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEME 362
             V+ +L       +A ++F E+ E G  P    Y  + +G  + G  +K+A   + EM 
Sbjct: 605 NPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664

Query: 363 RSGVLPDEHTYSLLIDAYANAG 384
             G +P+  ++ +L +   N G
Sbjct: 665 DKGFIPEFSSFRMLAEGLLNLG 686


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 184/372 (49%), Gaps = 13/372 (3%)

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A   LG    +GL P   T++ ++  LS+  + I+A  +F+E+ + G +P    Y+ ++ 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  KMG    A  ++ +ME  G  P+   YS +ID+         A   L EM      P
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   YS IL G+ + G       + K+M    V PDT  +N+++D   K   +  A   F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M+ +G+EP+  T+N L+D +    + D A++LF  M  +G  P   +YNI+I    + 
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            R ++ K LL  M  + L P+ VTY+TL+  + Q GR  DA + LE            MR
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE-----------MR 319

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           + GL P  +  + +++   +     EAF +L+ M+E+ ++P++  YT L++ +    K  
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379

Query: 644 KVFSSYLFFNIY 655
              +  LF N++
Sbjct: 380 A--ARELFSNLF 389



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 216/455 (47%), Gaps = 13/455 (2%)

Query: 132 LLKNLCSSNSS-IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQ 189
           L+   C SN      A++V+  + K  L  ++ + +S L++ L    K+ +A  L  +  
Sbjct: 16  LINCFCHSNHDHFHFAFSVLGNMFKLGLQPNH-VTFSTLLNGLSSKAKIIDAVKLFDEMV 74

Query: 190 RLT----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           ++      +TY+ +I+   +      A+ L+ KM + G   + + YS +I SL +   I 
Sbjct: 75  KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLIT 134

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            ++  +   E+    I  +    + ++ GF   G +++A           + P T T+  
Sbjct: 135 EAM--EFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  LS  G  +EA+ VFE + E G++P    YNAL+ GY     + +A+ + + M R G
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P   +Y++LI  +  +GR + A+ +L EM      P++  YS ++ G+   G  Q   
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-- 483
           ++L+EM+S G+ PD   Y++++D   K   L  A      M    IEP+   +  LI   
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGM 372

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           C+F  G+ + A ELF  +  +G  P   TY +MI+ L +     +   L  +M   G LP
Sbjct: 373 CNF--GKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           N  TY  ++  + ++G   +A   +E +  +  +A
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSA 465



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 215/471 (45%), Gaps = 23/471 (4%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLK 134
           L LQ     F+ LLN LS  +    A  L           F         P  + +S + 
Sbjct: 41  LGLQPNHVTFSTLLNGLSSKAKIIDAVKL-----------FDEMVKMGYEPDVITYSTII 89

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-L 191
           N      S  +A  ++  +++   C    ++YS +I +L + + + EA  FL     R +
Sbjct: 90  NGLCKMGSTTMAIQLLKKMEEKG-CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGI 148

Query: 192 TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           +P  +TY++++          +A +L  +M +     D + +++++  L++   I  +  
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA-- 206

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           Q +++ +    +E +    N ++ G+       +A +   +    G +P   +Y  +I  
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              SGR  EA+ +  E+    L P T  Y+ L+KG+ + G  +DA+ ++ EM   G+LPD
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS+++D     G  + A  +LK M+ S  +PN FIY+ ++ G  + G+ +   ++  
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            +   G++PD   Y VMI    K    + A   F  M   G  P++ T+N +I    + G
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
               A  L EEM  RG+   ++T+ ++ +L    E  +++  L  +  +QG
Sbjct: 447 DTSNAGRLIEEMVGRGFSADSSTFQMLSDL----ESRDEIISLFMHGSSQG 493


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 206/459 (44%), Gaps = 16/459 (3%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
            +TYN L+ +  +    +K   L+ +M   G  C  + + Y++VI  LTR   ++ +   +
Sbjct: 1120 VTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEA--AE 1177

Query: 252  LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            L + +   K +      N +I G    G   K        +  G+ P   TY A+I  L 
Sbjct: 1178 LVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 1236

Query: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             SG    A+  F E++  GL P    YN+LL GY K G LK+A  +  ++ R+G+ P   
Sbjct: 1237 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 1296

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            TY++LID Y   G  E ARI+ +EM      PN   Y+ ++ G  +        +   EM
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356

Query: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             S G++PD   YN  I        +  A    + ++ EGI  DT+T+N LI    K G  
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNL 1416

Query: 492  DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
              A+EL  +M   G  P   TY  +I+   E+    + +++  NM + GLLP+ VT+T +
Sbjct: 1417 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 1476

Query: 552  VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
            +  Y           C  G    A   FR M  +G++P+ +  N LI+A     R   A 
Sbjct: 1477 IHAY-----------CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAS 1525

Query: 612  AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
                 M E GL  +  TYT L+    +V  +      Y 
Sbjct: 1526 HHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYF 1564



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 193/462 (41%), Gaps = 60/462 (12%)

Query: 194  LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            +TYN +I+   R  DLE+A  L+  MR       F    L+   L R        ++K+Y
Sbjct: 1157 VTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLAR------GCVKKVY 1210

Query: 254  K---EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
                E+E + I       N +I G  ++G    A       + +GL P   TY +++   
Sbjct: 1211 DLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGY 1270

Query: 311  SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              +G   EA  +F +L+ +GL P    YN L+ GY ++G L++A  +  EM   G LP+ 
Sbjct: 1271 CKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNV 1330

Query: 371  HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             TY++L+    N      AR    EM     +P+ F Y+  +      G+  R F++ + 
Sbjct: 1331 CTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREV 1390

Query: 431  MKSSGVEPDTHFYNVMIDTFGK-------------------------YNCLHHAMAA--- 462
            +   G+  DT  YN++I    K                         Y CL HA      
Sbjct: 1391 LMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 1450

Query: 463  -------FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
                   F+ M+S+G+ P  +T+  +I  + + G    A   F +M E G  P   TYN+
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 1510

Query: 516  MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            +I+ L    R +        M  +GL+ N  TYT L+D   + G ++DA+          
Sbjct: 1511 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMR--------- 1561

Query: 576  VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
               +  M  +G+ P  L   +L+  F     D      ++Y+
Sbjct: 1562 --FYFEMHQNGIHPDYLTHKALLKGF-----DGHVHHTIEYL 1596



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 171/367 (46%), Gaps = 27/367 (7%)

Query: 295  GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            G++P       V+  L ++ R  +  AV EE+ E G++P    YN LL  ++K G     
Sbjct: 1079 GVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKV 1138

Query: 355  EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
              ++ EME   SG LP++ TY+++I      G  E A  +++ M +S  K +SF Y+ ++
Sbjct: 1139 AMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS-KKASSFTYNPLI 1197

Query: 413  AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
             G   RG  ++ + +  EM++ G+ P    YN MI    +   +  A   F  M + G+ 
Sbjct: 1198 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 1257

Query: 473  PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            PD IT+N+L++ + K G    A  LF +++  G  P   TYNI+I+        E+ + L
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317

Query: 533  LGNMRAQGLLPNVVTYTTLV-------DIYGQSGRFDDAIE--------------CLEGL 571
               M  QG LPNV TYT L+        +      FD+ +               C E +
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 1377

Query: 572  SDQAVNAF---RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                  AF    V+  +G+    +  N LI+   +     +A  +   M  NGL+PD +T
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437

Query: 629  YTTLMKA 635
            YT L+ A
Sbjct: 1438 YTCLIHA 1444



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 193/422 (45%), Gaps = 9/422 (2%)

Query: 153  LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLE 210
            L K    ++Y  L + L+ A G  +K+Y+  L  + + + P  +TYNA+I    ++  +E
Sbjct: 1184 LSKKASSFTYNPLITGLL-ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVE 1242

Query: 211  KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
             A    ++MR  G   D I Y+ ++    +   +  +LL  L+ ++    +       N 
Sbjct: 1243 AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALL--LFGDLRRAGLAPTVLTYNI 1300

Query: 271  VIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G+ + GD  +A R L    G  G  P   TY  ++    N      A   F+E+   
Sbjct: 1301 LIDGYCRLGDLEEA-RILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359

Query: 330  GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            GL+P   AYN  +   + +G +  A  +   +   G+  D  TY++LI      G  + A
Sbjct: 1360 GLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419

Query: 390  RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            + +  +M  +  +P+   Y+ ++  + +RG  +   ++   M S G+ P    + V+I  
Sbjct: 1420 KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHA 1479

Query: 450  FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            + +   L+ A   F +ML EG+EP+ IT+N LI    + GR   A   F EM ERG    
Sbjct: 1480 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539

Query: 510  TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              TY ++I+   +   WED  R    M   G+ P+ +T+  L+   G  G     IE L+
Sbjct: 1540 KYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK--GFDGHVHHTIEYLD 1597

Query: 570  GL 571
             +
Sbjct: 1598 NV 1599



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 25/209 (11%)

Query: 455  CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            C    ++AF  M S G+ PD    N ++       R+D    + EEM E G  P   TYN
Sbjct: 1064 CSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYN 1123

Query: 515  IMINLLGEQERWEDVKRLLGNM--RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             +++   ++ R + V  LL  M  R  G LPN VTY  ++    + G  ++A E +EG+ 
Sbjct: 1124 TLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR 1183

Query: 573  -DQAVNAFRV----------------------MRTDGLKPSNLALNSLINAFGEDQRDAE 609
              +  ++F                        M  +G+ P+ +  N++I+   +      
Sbjct: 1184 LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 1243

Query: 610  AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A      M+  GL PDV+TY +L+    +
Sbjct: 1244 AQVKFAEMRAMGLLPDVITYNSLLNGYCK 1272



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 10/149 (6%)

Query: 498  FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            F EM   G  P     N ++ +L +  RW+D+  +   M   G+ P++VTY TL+D + +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 558  SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             GR D     L+ +           R  G  P+++  N +I          EA  +++ M
Sbjct: 1132 EGRKDKVAMLLKEME---------TRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM 1182

Query: 618  KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + +  K    TY  L+  L+      KV+
Sbjct: 1183 RLSK-KASSFTYNPLITGLLARGCVKKVY 1210



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 555  YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
            Y +  +  DA   L+  S   ++AFR M + G+ P     N ++    +  R  +  AV 
Sbjct: 1050 YSKECKARDAT--LDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVH 1107

Query: 615  QYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            + M E G++P +VTY TL+ + ++  +  KV
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKV 1138


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 251/584 (42%), Gaps = 73/584 (12%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLLS 186
           HSLL ++     S D A  ++ ++    +    EL+Y   + ALGR    +K  E F   
Sbjct: 111 HSLLASISKQEDSSD-ATELLEFIAGELVLTDSELVY--FVKALGRQGKWKKALEVFEWI 167

Query: 187 QRQ---RLTPLTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTN 242
           ++    +L  +   +++S    ++ L  AL L   ++QD  Y  D   Y+ +I  L+R  
Sbjct: 168 RKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRAR 227

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA-SKAMRFLGMAQGVGLSPKTA 301
           + D  +   L++ ++ +    +    N ++  + K GD+  +        + + +SP   
Sbjct: 228 RFDEGI--TLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDY 285

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +ITA   +    EA  +F+E+KE+G  P    YNALL  Y K G  K+A  ++ EM
Sbjct: 286 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 345

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E +G+ P+  TY+ LI AYA AG  + A  + K +      P+ F Y  +++ +     +
Sbjct: 346 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERY 405

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++  +   EM+ +   P+   YN++ID +G+   L   M  F  M  +   PD +TWN+L
Sbjct: 406 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSL 465

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG-------------------- 521
           +     CG       +F EM+  GY P   T+NI+I   G                    
Sbjct: 466 LKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGL 525

Query: 522 ---------------EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF----- 561
                           + RW+  +++   M   GL  +   +  L+  Y  SG+F     
Sbjct: 526 QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRK 585

Query: 562 -DDAIE-------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             D +E                   C  G+ ++A  A   +  +G  P     N++I+  
Sbjct: 586 YIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMC 645

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            +      A  +L+ +++  LKPD VTY  LM    R   ++K 
Sbjct: 646 AKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKA 689



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 235/514 (45%), Gaps = 32/514 (6%)

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLLSQRQRLTP 193
           C  NS    A  +   +++   C +  + Y+ L+   G+    ++  E  +  +   ++P
Sbjct: 294 CIQNSHCQEALRLFQEMKEAGCCPN-RVTYNALLDVYGKGGMHKEASELLVEMEAAGISP 352

Query: 194 --LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
             +TYN LI+A AR    ++A  L   +   G   D   Y  +I +  R  + + +L  +
Sbjct: 353 NIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKAL--E 410

Query: 252 LYKEIE---CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            + E+    C    +   +L D+     K  D  K  +F+   Q    +P   T+ +++ 
Sbjct: 411 TFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFM---QEKNCTPDLVTWNSLLK 467

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           +  N G   E   VF E+K +G  P    +N L++ Y + GY+  +  +   + R+G+ P
Sbjct: 468 SFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQP 527

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
              T++ L+ + A  GRW+    V +EM  +  + +   ++ ++  Y + G++ +  + +
Sbjct: 528 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 587

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCL----HHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            E++ S  +P      ++  TF    C     + A  A +++   G  PD   +N +I  
Sbjct: 588 DELEKSAKQP---LSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISM 644

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K G  +RA +L EE+++    P   TYN ++++ G +  +   + ++  MR  G  PN
Sbjct: 645 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPN 704

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           ++TY TL+  Y + GR DDA              F  M    ++P N   N+L+ ++   
Sbjct: 705 LITYNTLLYSYTKHGRMDDA-----------ARVFGDMVAARVRPDNFTFNTLVGSYSSL 753

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               EA +V++YM E+G +P  +T+  L+    R
Sbjct: 754 GLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 19/445 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A  R+    EA  L +    + L P   TY  LISA  R +  EKAL   ++MR
Sbjct: 357 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 416

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     + + Y+++I    R  K+D   + K++K ++      D    N ++  F   G 
Sbjct: 417 KTNCTPNIVTYNILIDIYGRMEKLDD--MMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 474

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++        +  G  P   T+  +I      G    +  +++ L  +GL+P    + A
Sbjct: 475 LTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAA 534

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G  +  E V  EM  +G+   +  ++ LI +YAN+G++   R  + E+E S 
Sbjct: 535 LMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSA 594

Query: 401 AKPNSFIYSRILA-GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
            +P S I  +     Y   G        L ++  +G  PD   +N MI    K   +  A
Sbjct: 595 KQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERA 654

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +   + +    ++PD +T+N L+  + + G Y +AEE+  EM+  G  P   TYN ++  
Sbjct: 655 VKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYS 714

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  R +D  R+ G+M A  + P+  T+ TLV  Y   G + +A+  +E +++      
Sbjct: 715 YTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH----- 769

Query: 580 RVMRTDGLKPSNLALNSLINAFGED 604
                 G +P+ +   +L++ +  +
Sbjct: 770 ------GCQPTQITFKALLDGYNRN 788



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 33/389 (8%)

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNSGRT 316
           CD  E    LL  +    +K  D+S A   L    G + L+     Y   + AL   G+ 
Sbjct: 104 CDVSEAAHSLLASI----SKQEDSSDATELLEFIAGELVLTDSELVY--FVKALGRQGKW 157

Query: 317 IEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            +A  VFE + K    K R  A  ++L        L + E + + +E    L  + +YSL
Sbjct: 158 KKALEVFEWIRKHDCFKLRGVATASILS------VLGNHEQLPAALELFESLKQDESYSL 211

Query: 376 LIDAY-------ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE-WQRTFQV 427
            + AY       + A R++    + + M+    + N+  Y+ +L  Y  RG+ W R   +
Sbjct: 212 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSL 271

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            +EMK   + PD + YN MI    + +    A+  F  M   G  P+ +T+N L+D + K
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G +  A EL  EM+  G  P   TYN +I         ++   L  ++ ++GL P+  T
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y TL+  + ++ R++ A+E            F  MR     P+ +  N LI+ +G  ++ 
Sbjct: 392 YCTLISAFNRAERYEKALE-----------TFTEMRKTNCTPNIVTYNILIDIYGRMEKL 440

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +   V ++M+E    PD+VT+ +L+K+ 
Sbjct: 441 DDMMKVFKFMQEKNCTPDLVTWNSLLKSF 469



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 12/228 (5%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKY-NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           + + M+  G   +   YNVM+D +GK  +      + F  M    I PD  T+NT+I   
Sbjct: 235 LFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITAC 294

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +      A  LF+EM+E G  P   TYN ++++ G+    ++   LL  M A G+ PN+
Sbjct: 295 IQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNI 354

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY  L+  Y ++G           L D+A    + + + GL P      +LI+AF   +
Sbjct: 355 VTYNELIAAYARAG-----------LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAE 403

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
           R  +A      M++    P++VTY  L+    R++K   +   + F  
Sbjct: 404 RYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 14/226 (6%)

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F+ LK+ +S  +  D + Y  +I    +       +  F+ M  EG   + +T+N ++D 
Sbjct: 200 FESLKQDESYSL--DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 257

Query: 485 HFKCG-RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           + K G  +DR + LF+EM++    P   TYN MI    +    ++  RL   M+  G  P
Sbjct: 258 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCP 317

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N VTY  L+D+YG+ G   +A E L             M   G+ P+ +  N LI A+  
Sbjct: 318 NRVTYNALLDVYGKGGMHKEASELL-----------VEMEAAGISPNIVTYNELIAAYAR 366

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                EA A+ + +   GL PD  TY TL+ A  R +++ K   ++
Sbjct: 367 AGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETF 412


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 238/528 (45%), Gaps = 33/528 (6%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           E +Y  ++   GR  K+ EA  + +R        +  +YNA+++         +A  +  
Sbjct: 76  EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M+  G + D   +++ ++S   T +  ++L  +L   +     E +      VI GF K
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAAL--RLLNNMPGQGCEFNAVSYCAVISGFYK 193

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A          G+ P   T+  +I  L   G   E+E +F ++ + G+ P    
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N  ++G  + G + +A  ++  +   G+ PD  +Y+ LI  +    +   A   L +M 
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            S  +PN F Y+ I+ G+   G  Q   ++L++    G  PD   Y+ +I+       ++
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMN 373

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AMA F   + +G +   I +NTL+    K G   +A +L ++M E G  P   TYN+++
Sbjct: 374 RAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVV 433

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           N L +     D   +L +  A+G +P++ T+ TL+D Y +    D AIE L+        
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGIT 493

Query: 570 -----------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                      GL      D  V+ F+ M   G  P+ +  N LI +F +D++ +EA  +
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMEL 553

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
            + MK  GL PD+VT  TL+  L    +  K +   LF  I K   +S
Sbjct: 554 FKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE--LFVTIEKEYKFS 599



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 229/555 (41%), Gaps = 72/555 (12%)

Query: 118 AESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR-- 175
           A SY AV +  +          N  I+ AY +   + K  +C    L ++ LIH L +  
Sbjct: 181 AVSYCAVISGFY--------KENCQIE-AYHLFDEMLKQGICPDI-LTFNKLIHVLCKKG 230

Query: 176 ----SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
               SEKL+   +   ++ + P   T+N  I    R   +++A  L+  +  +G   D I
Sbjct: 231 NVQESEKLFSKVM---KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +Y+ +I    + +K+  +    L+K +    +E +    N +I GF KAG    A + L 
Sbjct: 288 SYNTLICGFCKHSKLVEAECY-LHKMVN-SGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK----------------- 332
            A   G  P   TY+++I  L N G    A AVF E  E G K                 
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 333 ------------------PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                             P    YN ++ G  KMG L DA  ++++    G +PD  T++
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID Y      + A  +L  M      P+   Y+ +L G     +        K M   
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   YN++I++F K   +  AM  F  M + G+ PD +T  TLI      G  D+A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 495 EELFEEMQERGYFP-CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            ELF  +++   F   T  +NIMIN    +      ++L   M      P+  TY  ++D
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645

Query: 554 IYGQSGRFDDA-IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            Y ++G  D A    LE +S             GL PS      ++N      R +EA  
Sbjct: 646 SYCKTGNIDLAHTFLLENIS------------KGLVPSFTTCGKVLNCLCVTHRLSEAVV 693

Query: 613 VLQYMKENGLKPDVV 627
           ++  M +NG+ P+ V
Sbjct: 694 IINLMVQNGIVPEEV 708


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 209/450 (46%), Gaps = 14/450 (3%)

Query: 198 ALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +L+ A  R DDL +A  +  KM +++    + + YS++I  L    +++ +   +L +E+
Sbjct: 168 SLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAF--QLKQEM 225

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                +   +    +I      G   KAM+ L         P   TY  +I  L   G+ 
Sbjct: 226 VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 285

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  VF ++ + GL P    +NAL+ GY K G++  A  ++S ME+    P+  TY+ L
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ++      +   A ++L+ +  +   P+   Y+ ++ G+   G+    F +   M S+G+
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EPD   +  +ID   K   L  A      M+ +GI  D +T+  LID H K G+      
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LFE M E        T+N  ++ LG+  +  +   +LG M   GL+P+VVT+T L++ + 
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++G    +++ LE            M+  G  P+      +IN    + R  EA  +L  
Sbjct: 526 RAGETALSLKMLER-----------MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           M   G+ P+  TY  L+KA ++  +  + F
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 604



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 210/463 (45%), Gaps = 22/463 (4%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALI 200
           A+ V   + K   C    + YSILIH L  + +L EAF L Q       + +  TY  LI
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIEC 258
            A       +KA+ ++ +M       +   Y+++I  L R  KI+  + + +K+ K   C
Sbjct: 242 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 301

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I       N +I G+ K G    A + L + +     P   TY  ++  L    ++ +
Sbjct: 302 PGI----ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +   + ++GL P    YN L+ G+ K G L  A  + + M  +G+ PD  T++ LID
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                GR E A  +L  M       +   ++ ++ G+   G+ +    + + M  +    
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
             H +N  +D  GK   L+ A A   +M+  G+ P  +T   LI+ H + G    + ++ 
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E M++ G  P   TY I+IN L    R E+ + +L +M + G+ PN  TY  LV  + ++
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           GR D A + +             M  +G +P++   ++L++ F
Sbjct: 598 GRLDRAFQIVS-----------TMVKNGCQPNSHIYSALLSGF 629



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 150/377 (39%), Gaps = 58/377 (15%)

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           GM + +G       Y+ ++  L+       A  V+  +   G       Y  ++    K 
Sbjct: 83  GMTE-LGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKN 141

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR---WESARIVLKEMEVSHAKPNS 405
           G+++ AE    ++ R G   D H  + L+   AN  R    E+ R+  K  +    +PNS
Sbjct: 142 GFVQAAEMFCCKVLRLGFGLDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEESCRPNS 199

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             YS ++ G  + G  +  FQ+ +EM                                  
Sbjct: 200 VTYSILIHGLCEAGRLEEAFQLKQEM---------------------------------- 225

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
            + +G +P T T+  LI      G  D+A ++ +EM  +   P   TY I+I+ L  + +
Sbjct: 226 -VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGK 284

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            E+   +   M   GL P ++T+  L++ Y           C EG    A     VM   
Sbjct: 285 IEEANGVFRKMLKHGLCPGIITFNALINGY-----------CKEGWVVSAFQLLSVMEKG 333

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             KP+    N L+       +  +AF +L+ + +NGL PD VTY  L      VD F K 
Sbjct: 334 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL------VDGFCKE 387

Query: 646 FSSYLFFNIYKMLSYSG 662
               + FNI+  ++ +G
Sbjct: 388 GQLNMAFNIFNSMNSAG 404



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 94/470 (20%), Positives = 183/470 (38%), Gaps = 97/470 (20%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASS----PSSLNRVEFKLAESYRAVPAPLWHS 131
            L+   + FT L++ L +    E A+ +  S      SL+ V F               +
Sbjct: 404 GLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT--------------A 449

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQRQR 190
           L+   C    + D+ +   + ++  N C +    ++  + ALG+  KL EA  +L +  +
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVE--NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507

Query: 191 --LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             L P  +T+  LI    R  +   +L ++ +M+Q G   +   Y+++I  L    +++ 
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE- 566

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                               +A   L      G+SP   TYA +
Sbjct: 567 ------------------------------------EAETILFSMSSFGVSPNHFTYAVL 590

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           + A   +GR   A  +   + ++G +P +  Y+ALL G+V    L +       +  +G 
Sbjct: 591 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFV----LSNTAIGARALSSTGD 646

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           L D  + S    +  N     S+  V + M+V HA                        +
Sbjct: 647 L-DARSLS----SEENDNNCLSSH-VFRLMDVDHA-----------------------LK 677

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  E+K  GV P    YN ++    K   +  A      M+  G+ PD    +++I+ + 
Sbjct: 678 IRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYC 735

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           K  +YD   E  + + +  + P   +Y  +I+ L  + R ++ ++L+ ++
Sbjct: 736 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 785


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 171/368 (46%), Gaps = 11/368 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N VI G+   G    A +     +   L P   TY + I+ L    R  EA  V  +L E
Sbjct: 256 NTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE 315

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SGL P    YNAL+ G    G L  A     EM   G++    TY+LLI A     R E 
Sbjct: 316 SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEE 375

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++KEM     +P+   Y+  + GY   G  ++   +  EM    + P    Y  +ID
Sbjct: 376 AEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID 435

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            FGK N +  A   F + + EG+ PD I +N LID H   G  DRA +L +EM      P
Sbjct: 436 VFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVP 495

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+N ++     + + E+ K+LL  M+ +G+ P+ ++Y TL+  Y + G   DA+E  
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALE-- 553

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M + G  P+ L  N+LI  + +      A  +L+ M+  G+ PD  T
Sbjct: 554 ---------VFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604

Query: 629 YTTLMKAL 636
           Y  +++A+
Sbjct: 605 YLYVIEAM 612



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 176/366 (48%), Gaps = 24/366 (6%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T  +  +++A     +  EA      +KE+ + P+T+  N+LL   +K+  +K A FV  
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM +  +     T++++I+     G+W+ A+  +  MEV   KPN   Y+ ++ GY  RG
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +++   ++ K MK   ++PD + YN  I    K   +  A     ++L  G+ P+ +T+N
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID     G  D+A    +EM  RG      TYN++I+ L  ++R E+ + ++  MR +
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386

Query: 540 GLLPNVVTYTTLVDIYGQSGR-------FDD--------AIECLEGLSD---------QA 575
           G+ P+VVTY   ++ Y + G        FD+         +E    L D         +A
Sbjct: 387 GVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEA 446

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F+    +G+ P  +  N+LI+    +     AF +L+ M    + PD VT+ TLM+ 
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 636 LIRVDK 641
             R  K
Sbjct: 507 YCRERK 512



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 163/363 (44%), Gaps = 24/363 (6%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T+  +I  L   G+  +A+     ++  G+KP    YN ++ GY   G  + A  +   
Sbjct: 218 VTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKT 277

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+   + PD +TY+  I       R E A  VL ++  S   PN+  Y+ ++ G  ++G+
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             + F    EM + G+      YN++I        +  A      M  +G+EPD +T+N 
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            I+ + +CG   +A  LF+EM E+   P   TY  +I++ G++ R  + +        +G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAV 576
           +LP+++ +  L+D +  +G  D A +                        C E   ++A 
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M+  G+KP +++ N+LI+ + +     +A  V   M   G  P ++TY  L++  
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGY 577

Query: 637 IRV 639
            ++
Sbjct: 578 SKI 580



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 11/277 (3%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           + LL+ AY    + + A   L  M+ +   P +   + +L+      + +  + V +EM 
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              ++     +N+MI+   +      A      M   G++P+ +T+NT+I+ +   G+++
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++F+ M+++   P   TYN  I+ L ++ R E+   +L  +   GL+PN VTY  L+
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D     G  D A        D+ +N        G+  S    N LI+A   ++R  EA  
Sbjct: 330 DGCCNKGDLDKAF----AYRDEMMNR-------GIVASVFTYNLLIHALFLEKRIEEAED 378

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +++ M+E G++PDVVTY   +    R     K  S +
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLF 415



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 11/208 (5%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  +++++  + ++     A+   + M    I P T T N+L+    K  +   A  ++E
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM +        T+NIMIN+L  + +W+  K  +G+M   G+ PNVVTY T+++ Y    
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY---- 262

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  CL G  + A   F+ M+   LKP     NS I+   +++R  EA  VL  + E
Sbjct: 263 -------CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE 315

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +GL P+ VTY  L+          K F+
Sbjct: 316 SGLVPNAVTYNALIDGCCNKGDLDKAFA 343



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 6/127 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N L+    R   +E+A  L+ +M++ G   D I+Y+ +I   ++   +  +L  +++
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL--EVF 555

Query: 254 KEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            E+    +  D  LL  N +I G++K G+A  A   L   Q  G++P  +TY  VI A+ 
Sbjct: 556 DEML--SLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMK 613

Query: 312 NSGRTIE 318
            +   +E
Sbjct: 614 TNDDLVE 620


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/610 (23%), Positives = 261/610 (42%), Gaps = 70/610 (11%)

Query: 61  QNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAES 120
           +N+ +     + DVL   K  +D T  L +    +NS+S               FK    
Sbjct: 33  ENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKS---------------FK---- 73

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEK 178
                 PL + ++    +S   +D    ++  ++   +  S +L  S++      G SE+
Sbjct: 74  ----HTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 179 LYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             + F   Q  R+ P    YN ++ A    +  +    + S M++DG   +   Y+++++
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 237 SLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLL------------------------- 268
           +L + N++D +   KL  E+    CD  E+    L                         
Sbjct: 190 ALCKNNRVDGA--HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVP 247

Query: 269 --NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N +I G  K     +A + L      G+ P   +Y  +I ALS++G    + AV  ++
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G  P    + +L+KG+   G   +A      M R GV+P+   Y+ L+    +    
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  V  +ME++   PN   YS ++ GY   G+     +V   M + G  P+   Y  M
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   + +  + A    + M  E   P+T+T+NT I      GR D A ++F++M   G 
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
           FP TTTYN +++ L +  R+ +   L+ +M  +G+  N+VTY T+  IYG          
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI--IYGY--------- 536

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G+  +A+     M   G KP  + +N +I+A+ +  +   A  ++  +      PD+
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 627 VTYTTLMKAL 636
           + YT+L+  +
Sbjct: 597 IAYTSLISGI 606



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 215/480 (44%), Gaps = 49/480 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC +N  +D A+ ++  +     C   E+ Y+ LI +L +  K+ EA  L+  
Sbjct: 184 YNILLKALCKNNR-VDGAHKLLVEMSSKG-CDPDEVSYTTLISSLCKLGKVKEARELAMS 241

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
              +   YNALI+   +    E+A  L+ +M   G   + I+Y+ +I +L+    ++ SL
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 249 --LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
             L K++    C     +      +I GF   G + +A+ F       G+ P    Y A+
Sbjct: 302 AVLAKMFAR-GCSP---NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L +     +A +VF +++ +G  P  + Y+AL+ GY K G L  A  V + M   G 
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+   Y+ ++D       +  A  +++ M+V +  PN+  ++  + G    G      +
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 427 VLKEMKSSGVEPDTHFYNVMIDT------FGK--------------------------YN 454
           V  +M +SG  P+T  YN ++D+      FG+                          Y 
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537

Query: 455 C---LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           C   L  A+    +M+  G +PD IT N +ID + K G+ + A +L + +    + P   
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV----DIYGQSG--RFDDAI 565
            Y  +I+ +      E+    L  M ++G+ PNV T+  LV       G SG  +F DA+
Sbjct: 598 AYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAV 657



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 64/352 (18%)

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            ++++ +M+  G+   E  +  +I +Y  AG  E A      M+    KP   IY+ IL 
Sbjct: 95  VQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILD 154

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
              D   +Q    +   MK  G+EP+   YN+++    K N +  A      M S+G +P
Sbjct: 155 ALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP 214

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +++ TLI    K G+   A EL        + P    YN +IN + ++  +E+  +LL
Sbjct: 215 DEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLL 269

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------------------E 569
             M  +G+ PNV++YTT+++    +G  + ++  L                        +
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL------- 622
           G S +A++ +  M  +G+ P+ +A N+L++     +   +A +V   M+ NG        
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 623 ----------------------------KPDVVTYTTLMKALIRVDKFHKVF 646
                                        P+VV YT ++  L R   F++ +
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 15/157 (9%)

Query: 494 AEELFEEMQERGYFPCTT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           A E F+ +     F  T  TY +MI  L  +   + V+ LL  M+ +G+  +   + +++
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             Y ++G            S+QA+  F  M+   +KP+    N +++A  ++ R      
Sbjct: 119 GSYRRAGS-----------SEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINP 167

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           +   MK++G++P+V TY  L+KAL    RVD  HK+ 
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 226/478 (47%), Gaps = 16/478 (3%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +SY ++ + +  A GR     E F     + + P  +TYN +I    +  DLE   +L  
Sbjct: 197 FSYNVVIAGMWRA-GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRD 255

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   + I Y++++  L R  ++  +    L  E+   K+  DG   + +  G ++
Sbjct: 256 QMVCHGLKPNAITYNVLLSGLCRAGRMGET--SALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD+   +   G +   G++    T + ++  L   G+   AE V + L  +GL P    
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ GY + G L+ A     +M+   + PD  TY+ LI+    A R  +A+ +L EM+
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P    ++ ++  Y   G+ ++ F VL EM+ +G++P+   Y  +++ F K   + 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+A  D M  + + P+   +N +ID + + G  D+A  L E+M+  G  P   TYN++I
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L  Q +  + + ++ ++    L+P+ V+Y TL+              C  G  D+A++
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC-----------CYRGNIDKALD 602

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             + M   G+K +    + LI+  G   R  E   + Q M +N + P    +  +++A
Sbjct: 603 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 211/465 (45%), Gaps = 16/465 (3%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY-HCDFIN 230
           GR   +  AF  L S   R     +N  + AC    DL +A+ ++ +M +DG    +  +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++VI  + R  +   ++  +++ E+    +  +    N +I G  K GD          
Sbjct: 199 YNVVIAGMWRAGRGGDAV--EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ 256

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   TY  +++ L  +GR  E  A+ +E+    + P    Y+ L  G  + G 
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            K    +  +  ++GV   ++T S+L++     G+   A  VL+ +  +   P   IY+ 
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   GE +  F    +MKS  ++PD   YN +I+   K   + +A      M   G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P   T+NTLID + + G+ ++   +  EMQE G  P   +Y  ++N   +  +  +  
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +L +M  + +LPN   Y  ++D Y +            G +DQA      M+++G+ PS
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVE-----------HGPNDQAFILVEKMKSNGISPS 545

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            +  N LI       + +EA  ++  +  + L PD V+Y TL+ A
Sbjct: 546 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 590



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 187/404 (46%), Gaps = 47/404 (11%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA-TYAAVITALSNSGRTIEAEAVFEELK 327
           N  +     AGD  +A+  L      G  P  A +Y  VI  +  +GR  +A  VF+E+ 
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E  + P    YN ++ G++K G L+    +  +M   G+ P+  TY++L+     AGR  
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 283

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF---------------------- 425
               +L EM      P+ F YS +  G    G+ +                         
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILL 343

Query: 426 -------------QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                        +VL+ + ++G+ P    YN +I+ + +   L  A + F +M S  I+
Sbjct: 344 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 403

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N LI+   K  R   A++L  EMQ+ G  P   T+N +I+  G   + E    +
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M+  GL PNVV+Y ++V+ + ++G+  +A+  L+ +  + V            P+  
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV-----------LPNAQ 512

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             N++I+A+ E   + +AF +++ MK NG+ P +VTY  L+K L
Sbjct: 513 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 153 LQKHNLCYSYE---LLYSILIHALGRSEKLYE-AFLLSQ--RQRLTP--LTYNALISACA 204
           L+   +C+  +   + Y++L+  L R+ ++ E + LL +   Q++ P   TY+ L    +
Sbjct: 253 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN D +  L+L  K  ++G        S+++  L +  K+  S+ +++ + +    +   
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKV--SIAEEVLQSLVNAGLVPT 370

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             + N +I G+ + G+   A    G  +   + P   TY A+I  L  + R   A+ +  
Sbjct: 371 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 430

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E++++G+ P  + +N L+  Y + G L+    V+SEM+ +G+ P+  +Y  +++A+   G
Sbjct: 431 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 490

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   A  +L +M      PN+ +Y+ I+  Y + G   + F ++++MKS+G+ P    YN
Sbjct: 491 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 550

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I      + +  A    + + +  + PD +++NTLI      G  D+A +L + M + 
Sbjct: 551 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 610

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           G      TY+ +I+ LG   R  +++ L   M    ++P+   +  +V+ Y + G
Sbjct: 611 GIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 665



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 12/365 (3%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK-A 337
           G  +   R  G+    G  P T  +   + A   +G   EA  +   +   G  P    +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  + G   DA  V  EM    VLP+  TY+ +ID +   G  E+   +  +M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN+  Y+ +L+G    G    T  +L EM S  + PD   Y+++ D   +     
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             ++ F + L  G+     T + L++   K G+   AEE+ + +   G  P    YN +I
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N   +    E      G M+++ + P+ +TY  L++   ++ R  +A + L  + D  VN
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                      P+    N+LI+A+G   +  + F VL  M+ENGLKP+VV+Y +++ A  
Sbjct: 439 -----------PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 487

Query: 638 RVDKF 642
           +  K 
Sbjct: 488 KNGKI 492



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 12/334 (3%)

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP-DEHT 372
           GR  +    F  L  +G +P T A+N  ++  V  G L +A  ++  M R G  P +  +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+++I     AGR   A  V  EM      PN   Y+ ++ G+   G+ +  F +  +M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G++P+   YNV++    +   +    A  D M S+ + PD  T++ L D   + G   
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
               LF +  + G      T +I++N L +  +    + +L ++   GL+P  V Y TL+
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           + Y Q+G        LEG    A + F  M++  +KP ++  N+LIN   + +R   A  
Sbjct: 379 NGYCQTGE-------LEG----AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 427

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +L  M++NG+ P V T+ TL+ A  R  +  K F
Sbjct: 428 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 157/343 (45%), Gaps = 7/343 (2%)

Query: 167 SILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           SIL++ L +  K+  A  + Q      L P  + YN LI+   +  +LE A +   +M+ 
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D I Y+ +I  L +  +I ++  Q L  E++ + +    +  N +I  + + G  
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNA--QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 457

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            K    L   Q  GL P   +Y +++ A   +G+  EA A+ +++    + P  + YNA+
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  YV+ G    A  +V +M+ +G+ P   TY+LLI    N  +   A  ++  +     
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 577

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P++  Y+ +++    RG   +   + + M   G++     Y+ +I   G    L     
Sbjct: 578 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEY 637

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            + +M+   + P     N +++ + K G   +AE+L +EM ++
Sbjct: 638 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 12/267 (4%)

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF- 442
           GR    R     +  + A+P++F +++ +      G+      +L+ M   G  P   F 
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YNV+I    +      A+  FD M    + P+ IT+NT+ID H K G  +    L ++M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TYN++++ L    R  +   LL  M +Q ++P+  TY+ L D   ++G   
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD-- 316

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                    S   ++ F     +G+   +   + L+N   +D + + A  VLQ +   GL
Sbjct: 317 ---------SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 367

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
            P  V Y TL+    +  +    FS++
Sbjct: 368 VPTRVIYNTLINGYCQTGELEGAFSTF 394


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/610 (23%), Positives = 261/610 (42%), Gaps = 70/610 (11%)

Query: 61  QNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAES 120
           +N+ +     + DVL   K  +D T  L +    +NS+S               FK    
Sbjct: 33  ENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKS---------------FK---- 73

Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEK 178
                 PL + ++    +S   +D    ++  ++   +  S +L  S++      G SE+
Sbjct: 74  ----HTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 179 LYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             + F   Q  R+ P    YN ++ A    +  +    + S M++DG   +   Y+++++
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 237 SLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLL------------------------- 268
           +L + N++D +   KL  E+    CD  E+    L                         
Sbjct: 190 ALCKNNRVDGA--HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVP 247

Query: 269 --NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N +I G  K     +A + L      G+ P   +Y  +I ALS++G    + AV  ++
Sbjct: 248 VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G  P    + +L+KG+   G   +A      M R GV+P+   Y+ L+    +    
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  V  +ME++   PN   YS ++ GY   G+     +V   M + G  P+   Y  M
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   + +  + A    + M  E   P+T+T+NT I      GR D A ++F++M   G 
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
           FP TTTYN +++ L +  R+ +   L+ +M  +G+  N+VTY T+  IYG          
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTI--IYGY--------- 536

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G+  +A+     M   G KP  + +N +I+A+ +  +   A  ++  +      PD+
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 627 VTYTTLMKAL 636
           + YT+L+  +
Sbjct: 597 IAYTSLISGI 606



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 207/461 (44%), Gaps = 43/461 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC +N  +D A+ ++  +     C   E+ Y+ LI +L +  K+ EA  L+  
Sbjct: 184 YNILLKALCKNNR-VDGAHKLLVEMSSKG-CDPDEVSYTTLISSLCKLGKVKEARELAMS 241

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
              +   YNALI+   +    E+A  L+ +M   G   + I+Y+ +I +L+    ++ SL
Sbjct: 242 FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSL 301

Query: 249 --LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
             L K++    C     +      +I GF   G + +A+ F       G+ P    Y A+
Sbjct: 302 AVLAKMFAR-GCSP---NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L +     +A +VF +++ +G  P  + Y+AL+ GY K G L  A  V + M   G 
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+   Y+ ++D       +  A  +++ M+V +  PN+  ++  + G    G      +
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 427 VLKEMKSSGVEPDTHFYNVMIDT------FGK--------------------------YN 454
           V  +M +SG  P+T  YN ++D+      FG+                          Y 
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537

Query: 455 C---LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           C   L  A+    +M+  G +PD IT N +ID + K G+ + A +L + +    + P   
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            Y  +I+ +      E+    L  M ++G+ PNV T+  LV
Sbjct: 598 AYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 64/352 (18%)

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            ++++ +M+  G+   E  +  +I +Y  AG  E A      M+    KP   IY+ IL 
Sbjct: 95  VQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILD 154

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
              D   +Q    +   MK  G+EP+   YN+++    K N +  A      M S+G +P
Sbjct: 155 ALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDP 214

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +++ TLI    K G+   A EL        + P    YN +IN + ++  +E+  +LL
Sbjct: 215 DEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLL 269

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------------------E 569
             M  +G+ PNV++YTT+++    +G  + ++  L                        +
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL------- 622
           G S +A++ +  M  +G+ P+ +A N+L++     +   +A +V   M+ NG        
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 623 ----------------------------KPDVVTYTTLMKALIRVDKFHKVF 646
                                        P+VV YT ++  L R   F++ +
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 15/157 (9%)

Query: 494 AEELFEEMQERGYFPCTT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           A E F+ +     F  T  TY +MI  L  +   + V+ LL  M+ +G+  +   + +++
Sbjct: 59  ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             Y ++G            S+QA+  F  M+   +KP+    N +++A  ++ R      
Sbjct: 119 GSYRRAGS-----------SEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINP 167

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           +   MK++G++P+V TY  L+KAL    RVD  HK+ 
Sbjct: 168 IYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/564 (23%), Positives = 269/564 (47%), Gaps = 35/564 (6%)

Query: 87  LLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAP-LWHSLLKNLCSSNSSIDL 145
           LL  L E  + ++A  + ++  +L R +F         P P ++  +++ L  +  ++DL
Sbjct: 44  LLTALREQPDPDAALRMLNA--ALARDDF--------APGPEVYEEIIRKL-GAVGALDL 92

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRL-----TPLTYN 197
              +V+ +++        +++S L    G  ++L++     +L+Q Q L       + YN
Sbjct: 93  MKVLVAEMRREGHQVKLGVVHSFLDSYEG--QQLFDDAVDLILNQLQPLFGIQADTVVYN 150

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            L++       ++   ++ S+M   G   D + ++ ++++L R +++ +++L  + +E+ 
Sbjct: 151 HLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL--MLEEMS 208

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      ++ GF + G    A+R       +G S    T   +I      GR  
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A    ++    G +P    YN  + G  +  ++  A  V+  M + G  PD  TY++++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ E A+ +L +M      P+   ++ ++A        +    + +++   GV 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD + +N++I+   K    H A+  F+ M + G  PD +T+NTLID     G+  +A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            ++M+  G    T TYN +I+ L ++ R E+ + +   M  QG+  N +T+ TL+D   +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             + DDA E    L +Q       M ++GL+P+N+  NS++  + +     +A  +L+ M
Sbjct: 509 DKKIDDAFE----LINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
             NG + DVVTY TL+  L +  +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGR 581



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 229/505 (45%), Gaps = 33/505 (6%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSK 218
           Y  L ++L+   G   KL E+       R + P  +T+N L+ A  R   +  A+ ++ +
Sbjct: 149 YNHLLNVLVE--GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 206

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           M   G   D   ++ ++Q       I+++L ++    E+ C   ++    +N +I G+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT---VNVLINGYCK 263

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A+ ++      G  P   TY   +  L  +     A  V + + + G  P    
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++    K G L++A+ ++++M   G LPD  T++ LI A     R E A  + +++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+ + ++ ++      G+     ++ +EMK+SG  PD   YN +ID       L 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M S G    TIT+NT+ID   K  R + AEE+F++M  +G      T+N +I
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           + L + ++ +D   L+  M ++GL PN +TY +++  Y + G    A + LE        
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 570 ----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                           G +  A+   R MR  G++P+  A N ++ +        +A ++
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M E G  PD +TY  + + L R
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++  T  YN LL   V+   +K  E V SEM   G+ PD  T++ L+ A   A +  +A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L+EM      P+   ++ ++ G+ + G  +   +V   M   G        NV+I+ 
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A+    + +++G EPD IT+NT ++   +      A ++ + M + G+ P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI++N L +  + E+ K +L  M  +G LP++ T+ TL+           A  C  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI-----------AALCTG 369

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              ++A++  R +   G+ P     N LINA  +      A  + + MK +G  PD VTY
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 630 TTLMKALIRVDKFHKVF 646
            TL+  L  + K  K  
Sbjct: 430 NTLIDNLCSLGKLGKAL 446



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
           K++ C   E+ Y+ LI  L    KL +A  L +    T      +TYN +I    +   +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L +  KID +   +L  ++  + ++ +    N
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF--ELINQMISEGLQPNNITYN 535

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  V   ++  
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G++P  KAYN +L+   +   ++DA  +  EM   G  PD  TY ++       G
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 220/492 (44%), Gaps = 19/492 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISA-CARNDDLEKALNLMSKMRQD 222
           Y+ ++    R+ +L  A  L+    + P   TY  ++ A CAR   +  AL ++ +M + 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGR-IADALAVLDEMPRR 151

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G       Y +++++  R     S++  ++ +++      LD    N V+      G   
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAV--RVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A+  L      G  P   +Y AV+  L  + R    + + EE+      P    +N L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               + G  +    V+++M   G  PD   Y+ +ID     G  E A  +L  M     K
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   Y+ +L G      W+ T ++L EM       D   +N+++D F +   +   +  
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            ++ML  G  PD IT+ T+I+   K G  D A  L + M   G  P T +Y I++  L  
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
            ERW D + L+  M  QG   N +T+ TL++             C +GL +QA+   + M
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFL-----------CKKGLVEQAIELLKQM 498

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +G  P  ++ +++I+  G+  +  EA  +L  M   G+ P+ + Y+++  AL R  + 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 643 HKVFSSYLFFNI 654
           +KV    +F NI
Sbjct: 559 NKVIQ--MFDNI 568



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/489 (22%), Positives = 198/489 (40%), Gaps = 50/489 (10%)

Query: 123 AVPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           AVP P     +  +++ LC+     D A AV+  + +   C     +Y +++ A  R   
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIAD-ALAVLDEMPRRG-CAPIPPMYHVILEAACRGGG 172

Query: 179 LYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
              A      L ++   L     N +++A      +++AL+L+  +   G   D ++Y+ 
Sbjct: 173 FRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNA 232

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           V++ L    +     +Q+L +E+       +    N +I    + G   +    L     
Sbjct: 233 VLKGLCMAKRW--GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVE 290

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G +P    YA +I  +   G    A  +   +   GLKP    YN LLKG       ++
Sbjct: 291 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 350

Query: 354 AEFVVSEM------------------------------------ERSGVLPDEHTYSLLI 377
            E +++EM                                    ER G +PD  TY+ +I
Sbjct: 351 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLER-GCMPDVITYTTVI 409

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + +   G  + A ++LK M     KPN+  Y+ +L G      W     ++ +M   G  
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 469

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            +   +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ D A EL
Sbjct: 470 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 529

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
              M  +G  P T  Y+ + + L  + R   V ++  N++   +  + V Y  ++    +
Sbjct: 530 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 589

Query: 558 SGRFDDAIE 566
            G  + AIE
Sbjct: 590 RGETERAIE 598



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRS---EKLYEA 182
           ++++LK LC +       +  V  L +  +   C    + ++ LI  L R+   E+++E 
Sbjct: 230 YNAVLKGLCMAKR-----WGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEV 284

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                    TP    Y  +I    +   LE A  ++++M   G   + + Y+ +++ L  
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCS 344

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             + + +  ++L  E+      LD    N ++  F + G   + +  L      G  P  
Sbjct: 345 AERWEET--EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV 402

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  VI      G   EA  + + +   G KP T +Y  +LKG        DAE ++S+
Sbjct: 403 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 462

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M + G   +  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+
Sbjct: 463 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 522

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N 
Sbjct: 523 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 582

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    K G  +RA E    M   G  P  +TY I+I  L  +   ++ + +L  + ++G
Sbjct: 583 VISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642

Query: 541 LL 542
            L
Sbjct: 643 AL 644


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 249/579 (43%), Gaps = 100/579 (17%)

Query: 169 LIHALGRSEKLYEAFL---LSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDG 223
           L  AL R+ +L +A L   + +R +  P    Y  LI A A     E+AL L+ +M++ G
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y      ++ ++++L R  ++  +L   L  E++   +E D  L N  I  F KAG+   
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADAL--ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   +Y ++I  L  +GR  EAE +F +++     P   AYN ++ 
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 193

Query: 344 GYVKMGYLKDAEFVVSEMERSGVL----------------------------------PD 369
           GY   G  +DA  ++  +   G +                                  P+
Sbjct: 194 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 253

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+++ID     GR E A  +L EME +   PN    + ++       + +  +++ +
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS--------------------- 468
                G  PD   Y  +ID  GK   +  A   F++ML                      
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373

Query: 469 --------------EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                          G +PD    NT +DC FK G  ++   +FE+++  G+ P   +Y+
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----- 569
           I+I+ L +  +  +   +   M+ QG   +   Y  +VD + +SG+   A E LE     
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493

Query: 570 --------------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                         GL+     D+A   F   ++ G++ + +  +SLI+ FG+  R  EA
Sbjct: 494 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 553

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + +L+ M + GL P+V T+ +L+ AL++ ++ ++    +
Sbjct: 554 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 592



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 230/492 (46%), Gaps = 19/492 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + +  +A+ L +R R     P  +++N++++   +   +++AL+L   M+
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    +   Y+++I  L    +++ +   ++  E+E   +  +   +N ++    KA  
Sbjct: 248 KDA-EPNSSTYNIIIDMLCLGGRVEEAY--RILDEMEHASLFPNLLTVNIMVDRLCKARK 304

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +    A   G +P   TY ++I  L   G+  EA  +FE++ ++G       Y +
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ +   G  +D   V  E+ R G  PD    +  +D    AG  E  R++ +++    
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS ++ G    G+ + T  +   MK  G   D   YN ++D F K   +H A 
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 484

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M  + ++P   T+  ++D   K  R D A  LFEE + +G       Y+ +I+  
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  R ++   +L  M  +GL PNV T+ +L+D   ++   ++A+ C           F+
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC-----------FQ 593

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M+     P+    + LIN     Q+  +AF   Q M++ GL P+VVTYTT++  L +V 
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653

Query: 641 KFHKVFSSYLFF 652
                +S +  F
Sbjct: 654 NITDAYSLFERF 665



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 237/524 (45%), Gaps = 24/524 (4%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHA--LGRSEKLYEA 182
           +L N+C        ++D+A      L+   L     SY  +  +L  A  LG +E+L+ A
Sbjct: 116 VLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF-A 174

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + ++R       YN +I         E A  L+ ++R+ G     ++++ ++  L +  
Sbjct: 175 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 234

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L   L++ ++ D  E +    N +I      G   +A R L   +   L P   T
Sbjct: 235 KVDEAL--SLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  + +  EA  +FE   + G  P    Y +L+ G  K G + +A  +  +M 
Sbjct: 292 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G   +   Y+ LI  +   GR E    V KE+     KP+  + +  +      GE +
Sbjct: 352 DAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 411

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + ++++S G  PD   Y+++I    K          F  M  +G   D   +N ++
Sbjct: 412 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 471

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+  +A E+ EEM+E+   P   TY  +++ L + +R ++   L    +++G+ 
Sbjct: 472 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 531

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   LE            M   GL P+    NSL++A  
Sbjct: 532 LNVVLYSSLIDGFGKVGRIDEAYLILEE-----------MMKKGLTPNVYTWNSLLDALV 580

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MKE    P+  TY+ L+  L RV K++K F
Sbjct: 581 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 199/456 (43%), Gaps = 18/456 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L   GR E+ Y      +   L P  LT N ++    +   LE+A  +     
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G + D + Y  +I  L +  ++D +   +L++++       +  +   +I  F   G 
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAY--RLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +        G  P        +  +  +G   +   +FE+++  G  P  ++Y+ 
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 434

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++   +   M++ G   D   Y+ ++D +  +G+   A  +L+EM+   
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P    Y  I+ G          + + +E KS G+E +   Y+ +ID FGK   +  A 
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+ +G+ P+  TWN+L+D   K    + A   F+ M+E    P T TY+I+IN L
Sbjct: 555 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +++        +M+ QGL+PNVVTYTT++    + G   D           A + F 
Sbjct: 615 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD-----------AYSLFE 663

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
             + +G  P   + N+LI       R  EA+    Y
Sbjct: 664 RFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVY 699



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 26/336 (7%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L    V+   L DA   V+ M R    P    Y++LI A A A R E A  +L++M+   
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +    +++ ++      G+      ++ E+K S +EPD   YNV ID FGK   +  A 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  + ++G++PD +++ ++I    K GR   AEELF +M+     PC   YN MI   
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
           G   R+ED  +LL  +R +G +P+VV++ +++   G+  + D+A+               
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 255

Query: 567 ---------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    CL G  ++A      M    L P+ L +N +++   + ++  EA+ + +  
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 618 KENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            + G  PD VTY +L+  L +   VD+ +++F   L
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 351



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWL-QKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           W+SLL  L  +    ++  A+V +   K   C      YSILI+ L R +K  +AF+   
Sbjct: 572 WNSLLDALVKAE---EINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQ 628

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             Q+Q L P  +TY  +IS  A+  ++  A +L  + + +G   D  +++ +I+ ++  N
Sbjct: 629 DMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 688

Query: 243 K 243
           +
Sbjct: 689 R 689


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 248/559 (44%), Gaps = 45/559 (8%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           L   L+  LC +  SID A      +Q   +  +  ++Y+ L+  L + ++L +A  +  
Sbjct: 46  LCSILIDGLCKAKRSID-ALRCFRAMQGSGI-VADTVIYTALLSGLWKEKRLDQALAILH 103

Query: 188 RQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             R     P  +TYN+LI    +N++ ++A  L   M+        + Y+ ++  L RT 
Sbjct: 104 EMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG 163

Query: 243 KIDSSLLQKLYKE-IECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVG 295
           K++ ++   L++E ++    ++D +   +VI       G  KA   S+A+  L   +  G
Sbjct: 164 KLERAM--ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
            SP   TY  ++  L    +   A  V  E+ ++G  P    YN+LL G  +   + DA 
Sbjct: 222 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 281

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++ +M   G  P+  TY  LID     GR + A  +L +M      P+  IY+ ++ G 
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 341

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
               +   +  +L+   S G++PD   Y+ +I    + N L  A      + S G  PD 
Sbjct: 342 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 401

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           I ++TLID   K G+ D A +L+E M   G      TY+ +I+ L +  R ++   LL  
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS----------------------- 572
           M   G  P+ +TY +L+         D+AIE +E +                        
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521

Query: 573 -DQAVNAF-----RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            D AV        R +   G     +A +SLI+   +  R AEA    Q M +NG+ PD 
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581

Query: 627 VTYTTLMKALIRVDKFHKV 645
           +TY+ L++ L +    H++
Sbjct: 582 ITYSILLEGLKKSKDLHEL 600



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 178/407 (43%), Gaps = 31/407 (7%)

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF + G+  +A R     +   L P     + +I  L  + R+I+A   F  ++ SG+  
Sbjct: 18  GFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVA 77

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T  Y ALL G  K   L  A  ++ EM   G  P+  TY+ LID        + A+ + 
Sbjct: 78  DTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELF 137

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-------KSSGVEPDTHFYNVM 446
           + M+     P+   Y+ +L G    G+ +R   + +EM             P+   Y+V+
Sbjct: 138 EHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVL 197

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ID   K N +  A+   + M + G  PD IT+  L+D   K  +   A E+  EM + G 
Sbjct: 198 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 257

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN +++ L    R  D   L+ +M  +G  PNVVTY TL+D   + GR  DA  
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317

Query: 567 CL-------------------EGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            L                    GL      D+++   R   + G+KP  +  +S+I    
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              R  EA  +L Y+K  G  PDV+ Y+TL+  L +  K  + F  Y
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 212/463 (45%), Gaps = 23/463 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY AL+    R  ++++A     +MR      +    S++I  L +  +   +L  + ++
Sbjct: 11  TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL--RCFR 68

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++   I  D  +   ++ G  K     +A+  L   +  G  P   TY ++I  L  + 
Sbjct: 69  AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNN 128

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM--ERSGVL----- 367
               A+ +FE +K     P    YN LL G  + G L+ A  +  EM   RS  +     
Sbjct: 129 EPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCS 188

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  TYS+LID    A R   A  +L+ M+     P+   Y+ ++ G     +    ++V
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L+EM  +G  P+   YN ++    +   +  A+A    M   G  P+ +T+ TLID   K
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            GR   A  +  +M ++G  P    YN++IN L + ++ ++   LL    + G+ P+VVT
Sbjct: 309 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 368

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y+++  IYG          C     D+A      +++ G  P  +  ++LI+   +  + 
Sbjct: 369 YSSV--IYGL---------CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 417

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFS 647
            EAF + + M  +G   DVVTY+TL+  L    RVD+ H + +
Sbjct: 418 DEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 460



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 18/318 (5%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    Y ALL+G+ + G +  A+    EM    ++P+    S+LID    A R   A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
             + M+ S    ++ IY+ +L+G        +   +L EM+  G EP+   YN +ID   
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF---- 507
           K N    A   F+ M S    P  +T+NTL+D  F+ G+ +RA  LF+EM +R       
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 508 ---PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY+++I+ L +  R      LL +M+A+G  P+V+TYT LVD           
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL--------- 236

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
             C E     A    R M   G  P+ +  NSL++     +R ++A A+++ M   G  P
Sbjct: 237 --CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294

Query: 625 DVVTYTTLMKALIRVDKF 642
           +VVTY TL+  L +V + 
Sbjct: 295 NVVTYGTLIDGLCKVGRV 312



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 205/471 (43%), Gaps = 27/471 (5%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHS-LLKNLCSSNSS 142
           +  LL+ L      E A AL      L+R    + +  R  P  + +S L+  LC +N  
Sbjct: 152 YNTLLDGLFRTGKLERAMALFQE--MLDRRSHDMDD--RCSPNVITYSVLIDGLCKANR- 206

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
           +  A  ++  ++    C    + Y+IL+  L +  K+  A+     +L        +TYN
Sbjct: 207 VSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 265

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           +L+    R   +  AL LM  M   G   + + Y  +I  L +  ++  +        + 
Sbjct: 266 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC------AML 319

Query: 258 CDKIELDG----QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            D I+  G     + N +I G  KA    +++  L  A   G+ P   TY++VI  L  S
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  EA  +   +K  G  P    Y+ L+ G  K G + +A  +   M   G   D  TY
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LID    AGR + A ++L  M      P++  Y+ ++ G  D        ++++EM+ 
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR-----MLSEGIEPDTITWNTLIDCHFKC 488
           S   P    YN++I    +   +  A+   ++     + + G   DTI +++LID   K 
Sbjct: 500 SNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKA 559

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           GR   A + F+EM + G  P   TY+I++  L + +   +++ L+ +   Q
Sbjct: 560 GRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 226/505 (44%), Gaps = 33/505 (6%)

Query: 162 YELLYSILIHALGRSEKLYE-AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           Y  L ++L  A G   KL E A+     Q + P  +T+N +I A  R      A+ ++ +
Sbjct: 164 YNHLLTVL--AEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEE 221

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           M       D   ++ +++       I+++L L+    E+ C    +    +N +I G+ K
Sbjct: 222 MSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVT---VNVLINGYCK 278

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A+ ++      G  P   T++  +  L  +G    A  V   + + G +P    
Sbjct: 279 LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ ++      G L++A+ +V++M  SG LPD  T++ LI A     + E A  + +E+ 
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    PN + ++ ++      G+     ++ +EMKSSG  PD   YN++ID       L 
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M   G    T+T+NT+ID   K  R + AEE+F++M   G      T+N +I
Sbjct: 459 KALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLI 518

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------ 571
           + L   ER +D   L+  M ++GL PN VTY +++  Y + G    A + L+ +      
Sbjct: 519 DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578

Query: 572 ------------------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                             +  A+   R MR  G+KP+  A N +I +        +A ++
Sbjct: 579 VDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSL 638

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M E G  PD  TY  + + L R
Sbjct: 639 FREMTEVGGPPDAFTYKIVFRGLCR 663



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 225/515 (43%), Gaps = 54/515 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ +I AL R+ +   A L+ +      + P   T+  L+        +E AL L ++M 
Sbjct: 199 FNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMS 258

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     +  +++I    +  ++  +L   + +EI  D  E D    +  + G  + G 
Sbjct: 259 EMGCSPTSVTVNVLINGYCKLGRVGDAL-GYIQQEI-ADGFEPDRVTFSTFVNGLCQNGH 316

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++ LG+    G  P   TY+ VI  L N+G   EA+ +  ++ +SG  P T  +N 
Sbjct: 317 VDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNT 376

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+        L++A  +  E+   G+ P+ +T+++LI+A    G    A  + +EM+ S 
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ ++      G+  +   +LKEM+ SG    T  YN +ID   K   +  A 
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD+M   GI  + IT+NTLID      R D A EL ++M   G  P   TYN ++   
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +Q        +L  M A G   +VVTY TL++   ++ R   A++ L G          
Sbjct: 557 CKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRG---------- 606

Query: 581 VMRTDGLKPSNLALNSLINAF--GEDQRDA------------------------------ 608
            MR  G+KP+  A N +I +   G + RDA                              
Sbjct: 607 -MRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665

Query: 609 ----EAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
               EAF  L  M +NG  P+  ++  L + L+ +
Sbjct: 666 GPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNL 700



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 200/454 (44%), Gaps = 19/454 (4%)

Query: 199 LISACARNDDLEKALNLMSKM--RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           L++A     D E AL +++    R DG       Y  +I+ L      D  L++ L  E+
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFD--LMKVLVGEM 116

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV-GLSPKTATYAAVITALSNSGR 315
             +  E+   L+   I  +A+      A   +     + G+   T  Y  ++T L+   +
Sbjct: 117 RREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK 176

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
               E+ + E+   G++P    +N ++    +    + A  ++ EM    V PDE T++ 
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++ +   G  E+A  +   M      P S   + ++ GY   G        +++  + G
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG 296

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
            EPD   ++  ++   +   + HA+     ML EG EPD  T++T+I+C    G  + A+
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +  +M + G  P TTT+N +I  L  + + E+   L   +  +GL PNV T+  L++  
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G    AV  F  M++ G  P  +  N LI+      + A+A  +L+
Sbjct: 417 -----------CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465

Query: 616 YMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
            M+ +G     VTY T++  L    R+++  +VF
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVF 499



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
           K + C   E+ Y+ILI  L  S KL +A  L +   ++      +TYN +I    +   +
Sbjct: 433 KSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRI 492

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L    +ID +   +L  ++  + ++ +    N
Sbjct: 493 EEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDA--AELVDQMISEGLQPNNVTYN 550

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K G+ SKA   L      G      TYA +I  L  + RT  A  +   ++  
Sbjct: 551 SILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK 610

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G+KP  KAYN +++   +    +DA  +  EM   G  PD  TY ++       G
Sbjct: 611 GMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGG 665


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 199/399 (49%), Gaps = 6/399 (1%)

Query: 168 ILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           + +  +G  E +Y+  +   R+R+ P  +++N +I+   +   L KA +++  M+  G  
Sbjct: 139 VKVGEIGDMEFVYKEMI---RRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 226 CDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
            + I Y+ +I    +  KI        + KE+  D I  +    N +I GF K  + S A
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAA 255

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           M+        G+ P   TY ++I  L N+G+  EA A+ +++  S LKP    +NALL G
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNG 315

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + K   +K A  +  +M + G+ P+  TY++LIDAY      E A  + + M      P+
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD 375

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ ++AG   +G+ +    ++ EM +  ++ D   YN++ID+      +  A+   D
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M  +G++P  +T+NT+ID + K G    A  L  +M++ G      TYN++I    +++
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           + ED   LL  M  +GL+PN +TY  + +   + G   D
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 183/389 (47%), Gaps = 14/389 (3%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA-- 309
           +YKE+   +IE      N VI G  K G  +KA   +   +  G+S    TY  +I    
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 310 -LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            +   G+  +A+A+ +E++  G+ P    +N L+ G+ K   +  A  V +EM R GV P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ LI+   N G+   A  +  +M  S  KPN   ++ +L G+      ++  ++ 
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M   G+ P+   YN++ID + K   +  A A +  ML +G+ PD  T+N LI    + 
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  + A  L  EM  +       TYNI+I+ L  +   +   RLL  M  +GL P+ +TY
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            T++D Y           C EG    A+N    M   G   +    N LI  F +  +  
Sbjct: 450 NTMIDGY-----------CKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           +A  +L  M E GL P+ +TY  + + ++
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYEIVTEEMM 527



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 14/351 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD-- 353
           + P   ++  VI  L   G+  +A  + E++K  G+      YN L+ GY KMG +    
Sbjct: 159 IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMY 218

Query: 354 -AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A+ ++ EM   G+ P+E T+++LID +       +A  V  EM     KPN   Y+ ++
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G  + G+      +  +M +S ++P+   +N +++ F K   +  A   FD M  +GI 
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N LID + K    + A  L+  M  +G  P  +TYN +I  L  +   E  + L
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           +  M  + L  +++TY  L+D     G    A+  L+ +  +           GLKPS L
Sbjct: 399 VSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK-----------GLKPSQL 447

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             N++I+ + ++     A  +   M++ G   +V TY  L+K   + DK  
Sbjct: 448 TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 139/319 (43%), Gaps = 49/319 (15%)

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           F+   + GLK    + N L+ G VK+G + D EFV  EM R  + P   +++++I+    
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
                                               G+  +   ++++MK  GV  +   
Sbjct: 176 V-----------------------------------GKLNKAGDIIEDMKVRGVSANVIT 200

Query: 443 YNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           YN +ID +   GK   ++ A A    M ++GI P+ +T+N LID   K      A ++F 
Sbjct: 201 YNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFA 260

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM  +G  P   TYN +IN L    +  +   L   M    L PN++T+  L++ +    
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGF---- 316

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C   +  QA   F  M   G+ P+    N LI+A+ +D+   +AFA+ + M  
Sbjct: 317 -------CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 369

Query: 620 NGLKPDVVTYTTLMKALIR 638
            G+ PDV TY  L+  L R
Sbjct: 370 KGVCPDVSTYNCLIAGLCR 388



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 14/242 (5%)

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++G    GE      V KEM    +EP    +N++I+   K   L+ A    + M   G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193

Query: 471 IEPDTITWNTLIDCHFKCGRYDR---AEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           +  + IT+NTLID + K G+  +   A+ + +EM+  G  P   T+NI+I+   + +   
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
              ++   M  QG+ PNVVTY +L++    +G+ ++A      L DQ VN+        L
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT----ALRDQMVNSC-------L 302

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           KP+ +  N+L+N F +++   +A  +   M + G+ P+V TY  L+ A  + +     F+
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 648 SY 649
            Y
Sbjct: 363 LY 364



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 8/223 (3%)

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q   Q+L  +       ++   ++++  + K         AF R    G++    + N L
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +    K G     E +++EM  R   P   ++NI+IN L +  +      ++ +M+ +G+
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             NV+TY TL+D Y + G+         G   +A    + MR DG+ P+ +  N LI+ F
Sbjct: 195 SANVITYNTLIDGYCKMGKI--------GKMYKADAILKEMRADGICPNEVTFNILIDGF 246

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +D+  + A  V   M   G+KP+VVTY +L+  L    K ++
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 14/238 (5%)

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           NS I   ++  Y      +  F+  K     G++      N ++    K   +      +
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN---LL 520
             M+   IEP  I++N +I+   K G+ ++A ++ E+M+ RG      TYN +I+    +
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  +      +L  MRA G+ PN VT+  L+D +           C +     A+  F 
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGF-----------CKDKNVSAAMKVFA 260

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            M   G+KP+ +  NSLIN    + +  EA A+   M  + LKP+++T+  L+    +
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCK 318


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 235/539 (43%), Gaps = 49/539 (9%)

Query: 153 LQKHNLCYSYELLYSILIHALG--RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDD 208
           L + N C+  +  Y+ LI+ L   ++E+  E    + ++  TP  +T+  LI+     + 
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            + AL + +KM       D   +  +I SL + +++  +  ++L  EI  + +  +    
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA--KELLNEISANGLVPNVITY 465

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G+ K+G    A+  L M +  G  P   TY +++  L    +  +A A+  ++++
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+ P    Y  LL+G        +A  +   ME++G+ PDEH Y++L DA   AGR E 
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   +    V+  K     Y+ ++ G+   G       +++ M   G  PD++ Y+V++ 
Sbjct: 586 AYSFIVRKGVALTK---VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 642

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L+ A+   D+M   GI+     +  LID   + G++D A+ ++ EM   G+ P
Sbjct: 643 ALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             TTY + IN   ++ R ED + L+  M  +G+ P+VVTY  L+D  G  G  D A   L
Sbjct: 703 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTL 762

Query: 569 EGLS----------------------------------------DQAVNAFRVMRTDGLK 588
           + +                                         D        M   GL 
Sbjct: 763 KRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLN 822

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           P+    +SLI  F +  R  EA  +L +M   GL P+   YT L+K       F K  S
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 207/434 (47%), Gaps = 20/434 (4%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+  ++SL R +   +  + ++Y ++  D +  D    N +I  + K GD + A R+  +
Sbjct: 151 YNFALRSLARFDM--TEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 208

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P+T T  A++     +G   +A  +F  +   G +    +Y  L++G      
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 268

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++ A  +   M+R G  P+   ++ LI     +GR   AR++   M  +   P+   Y+ 
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G      ++ + M+ +G  PD   YN +I           A    +  + EG
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 387

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             P  +T+  LI+ +    ++D A  +  +M           +  +IN L +++R ++ K
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  + A GL+PNV+TYT+++D Y +SG+ D A+E L           ++M  DG +P+
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-----------KMMERDGCQPN 496

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
               NSL+    +D++  +A A+L  M+++G+ P+V+TYTTL++       F        
Sbjct: 497 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA----- 551

Query: 651 FFNIYKMLSYSGEK 664
            F +++M+  +G K
Sbjct: 552 -FRLFEMMEQNGLK 564



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 236/525 (44%), Gaps = 30/525 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL---SQ 187
           L++ LC +     +  A+V +L  K + C      ++ LI  L +S ++ +A LL     
Sbjct: 259 LIQGLCDAKC---VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +  + P  +TYNA+I   ++   +  AL +   M ++G H D   Y+ +I  L      +
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 375

Query: 246 SS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +  LL    KE     +     L+N    G+  A     A+R                + 
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLIN----GYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I +L    R  EA+ +  E+  +GL P    Y +++ GY K G +  A  V+  MER 
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  P+  TY+ L+       +   A  +L +M+     PN   Y+ +L G  D  ++   
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F++ + M+ +G++PD H Y V+ D   K      A  A+  ++ +G+    + + TLID 
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDG 608

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K G  D A  L E M + G  P + TY+++++ L +Q+R  +   +L  M  +G+   
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 545 VVTYTTLVDIYGQSGRFDDAIECL-EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +  YT L+D            E L EG  D A   +  M + G KPS       IN++ +
Sbjct: 669 IFAYTILID------------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCK 716

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           + R  +A  ++  M+  G+ PDVVTY  L+     +    + FS+
Sbjct: 717 EGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 203/447 (45%), Gaps = 17/447 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +Y  LI        + KAL L   M++DG   +   ++ +I  L ++ ++  + L  L+ 
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL--LFD 312

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +  + +       N +IVG++K G  + A++   + +  G  P   TY  +I  L +  
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ- 371

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +T EAE +     + G  P    +  L+ GY       DA  + ++M  S    D   + 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI++     R + A+ +L E+  +   PN   Y+ I+ GY   G+     +VLK M+  
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G +P+   YN ++    K   LH AMA   +M  +GI P+ IT+ TL+        +D A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LFE M++ G  P    Y ++ + L +  R E+    +     +G+    V YTTL+D 
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 608

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + ++G  D A   +E + D+           G  P +   + L++A  + +R  EA  +L
Sbjct: 609 FSKAGNTDFAATLIERMIDE-----------GCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
             M   G+K  +  YT L+  ++R  K
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGK 684



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 209/496 (42%), Gaps = 63/496 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + S++   C S   +D+A  V+  +++   C      Y+ L++ L + +KL++A  LL++
Sbjct: 465 YTSIIDGYCKS-GKVDIALEVLKMMERDG-CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 188 RQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            Q+  + P  +TY  L+       D + A  L   M Q+G   D   Y+++  +L +  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +     Y  I    + L       +I GF+KAG+   A   +      G +P + TY
Sbjct: 583 AEEA-----YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 304 AAVITALSNSGRTIEA-----------------------------------EAVFEELKE 328
           + ++ AL    R  EA                                   + ++ E+  
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG KP    Y   +  Y K G L+DAE ++ +MER GV PD  TY++LID   + G  + 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 389 ARIVLKEMEVSHAKPNSFIYSRIL----------------AGYRDRGEWQRTFQVLKEMK 432
           A   LK M  +  +PN + Y  +L                +G  +  E   T+Q+L+ M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+ P    Y+ +I  F K   L  A    D M  +G+ P+   +  LI C      ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A      M E G+ P   +Y +++  L  +  +E VK L  ++   G   + V +  L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 553 DIYGQSGRFDDAIECL 568
           D   ++G  D   + L
Sbjct: 938 DGLLKAGYVDICFQML 953



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 177/414 (42%), Gaps = 69/414 (16%)

Query: 301 ATYAAVITALSNSGRTIE-----AEAVFEELKESG---LKPRTKAYNALLKGYVKMGYLK 352
           A Y  ++ ++ N   T E     A+A+ + ++ +G   L    K YN  L+   +    +
Sbjct: 107 AQYERLVVSMLNCSDTAEDMRVSADAI-QAIRRTGSARLALSPKCYNFALRSLARFDMTE 165

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
               V S++ + G+LPD  TY+ +I +Y   G   +A    + +     +P +F  + ++
Sbjct: 166 YMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALV 225

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA----------- 461
            GY   GE ++   +   M   G + + + Y ++I       C+  A+            
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCS 285

Query: 462 ------------------------AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                                    FD M   G+ P  +T+N +I  + K GR + A ++
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            E M++ G  P   TYN +I  L +Q + E+ + LL N   +G  P VVT+T L++ Y  
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404

Query: 558 SGRFDDAI---------ECLEGLS---------------DQAVNAFRVMRTDGLKPSNLA 593
           + +FDDA+         +C   L                 +A      +  +GL P+ + 
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVIT 464

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             S+I+ + +  +   A  VL+ M+ +G +P+  TY +LM  L++  K HK  +
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 179/452 (39%), Gaps = 67/452 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           + +LL+  C  +   D A+ +   ++++ L    E  Y++L  AL   GR+E+ Y +F++
Sbjct: 535 YTTLLQGQCDEHD-FDNAFRLFEMMEQNGL-KPDEHAYAVLTDALCKAGRAEEAY-SFIV 591

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +   LT + Y  LI   ++  + + A  L+ +M  +G   D   YS+++ +L +  +++
Sbjct: 592 RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN 651

Query: 246 SSLL---QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +L    Q   + I+C  I     L+++++    + G    A R        G  P   T
Sbjct: 652 EALPILDQMSLRGIKC-TIFAYTILIDEML----REGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF------ 356
           Y   I +    GR  +AE +  +++  G+ P    YN L+ G   MGY+ D  F      
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI-DRAFSTLKRM 765

Query: 357 ----------------------------------------------VVSEMERSGVLPDE 370
                                                         ++  M + G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TYS LI  +  AGR E A ++L  M      PN  IY+ ++    D   +++    +  
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G +P    Y +++             + F  +L  G   D + W  L D   K G 
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D   ++   M++R     + TY ++ N + E
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALVTNKMHE 977


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 235/539 (43%), Gaps = 49/539 (9%)

Query: 153 LQKHNLCYSYELLYSILIHALG--RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDD 208
           L + N C+  +  Y+ LI+ L   ++E+  E    + ++  TP  +T+  LI+     + 
Sbjct: 348 LMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            + AL + +KM       D   +  +I SL + +++  +  ++L  EI  + +  +    
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA--KELLNEISANGLVPNVITY 465

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G+ K+G    A+  L M +  G  P   TY +++  L    +  +A A+  ++++
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+ P    Y  LL+G        +A  +   ME++G+ PDEH Y++L DA   AGR E 
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEE 585

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   +    V+  K     Y+ ++ G+   G       +++ M   G  PD++ Y+V++ 
Sbjct: 586 AYSFIVRKGVALTK---VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLH 642

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L+ A+   D+M   GI+     +  LID   + G++D A+ ++ EM   G+ P
Sbjct: 643 ALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 702

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             TTY + IN   ++ R ED + L+  M  +G+ P+VVTY  L+D  G  G  D A   L
Sbjct: 703 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTL 762

Query: 569 EGLS----------------------------------------DQAVNAFRVMRTDGLK 588
           + +                                         D        M   GL 
Sbjct: 763 KRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLN 822

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           P+    +SLI  F +  R  EA  +L +M   GL P+   YT L+K       F K  S
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 208/434 (47%), Gaps = 20/434 (4%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+  ++SL R +   +  + ++Y ++  D +  D    N +I  + K GD + A R   +
Sbjct: 151 YNFALRSLARFDM--TEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRL 208

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P+T T  A++     +G   +A  +F  +   G +    +Y  L++G  +   
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKC 268

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A  +   M+R G  P+   ++ LI     +GR   AR++   M  +   P+   Y+ 
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G      ++ + M+ +G  PD   YN +I           A    +  + EG
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 387

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             P  +T+  LI+ +    ++D A  +  +M           +  +IN L +++R ++ K
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  + A GL+PNV+TYT+++D Y +SG+ D A+E L           ++M  DG +P+
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-----------KMMERDGCQPN 496

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
               NSL+    +D++  +A A+L  M+++G+ P+V+TYTTL++       F        
Sbjct: 497 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA----- 551

Query: 651 FFNIYKMLSYSGEK 664
            F +++M+  +G K
Sbjct: 552 -FRLFEMMEQNGLK 564



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 234/524 (44%), Gaps = 28/524 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL---SQR 188
           L++ LC +    +    V+  + K + C      ++ LI  L +S ++ +A LL     +
Sbjct: 259 LIQGLCEAKCVREAL--VLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             + P  +TYNA+I   ++   +  AL +   M ++G H D   Y+ +I  L      ++
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEA 376

Query: 247 S-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             LL    KE     +     L+N    G+  A     A+R                +  
Sbjct: 377 EELLNNAVKEGFTPTVVTFTNLIN----GYCMAEKFDDALRMKNKMMSSKCKLDLQVFGK 432

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I +L    R  EA+ +  E+  +GL P    Y +++ GY K G +  A  V+  MER G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P+  TY+ L+       +   A  +L +M+     PN   Y+ +L G  D  ++   F
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++ + M+ +G++PD H Y V+ D   K      A  A+  ++ +G+    + + TLID  
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGF 609

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  D A  L E M + G  P + TY+++++ L +Q+R  +   +L  M  +G+   +
Sbjct: 610 SKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTI 669

Query: 546 VTYTTLVDIYGQSGRFDDAIECL-EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             YT L+D            E L EG  D A   +  M + G KPS       IN++ ++
Sbjct: 670 FAYTILID------------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
            R  +A  ++  M+  G+ PDVVTY  L+     +    + FS+
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 203/447 (45%), Gaps = 17/447 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +Y  LI        + +AL L   M++DG   +   ++ +I  L ++ ++  + L  L+ 
Sbjct: 255 SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL--LFD 312

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +  + +       N +IVG++K G  + A++   + +  G  P   TY  +I  L +  
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ- 371

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +T EAE +     + G  P    +  L+ GY       DA  + ++M  S    D   + 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI++     R + A+ +L E+  +   PN   Y+ I+ GY   G+     +VLK M+  
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G +P+   YN ++    K   LH AMA   +M  +GI P+ IT+ TL+        +D A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LFE M++ G  P    Y ++ + L +  R E+    +     +G+    V YTTL+D 
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 608

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + ++G  D A   +E + D+           G  P +   + L++A  + +R  EA  +L
Sbjct: 609 FSKAGNTDFAATLIERMIDE-----------GCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
             M   G+K  +  YT L+  ++R  K
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGK 684



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 209/496 (42%), Gaps = 63/496 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + S++   C S   +D+A  V+  +++   C      Y+ L++ L + +KL++A  LL++
Sbjct: 465 YTSIIDGYCKS-GKVDIALEVLKMMERDG-CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 188 RQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            Q+  + P  +TY  L+       D + A  L   M Q+G   D   Y+++  +L +  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +     Y  I    + L       +I GF+KAG+   A   +      G +P + TY
Sbjct: 583 AEEA-----YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 637

Query: 304 AAVITALSNSGRTIEA-----------------------------------EAVFEELKE 328
           + ++ AL    R  EA                                   + ++ E+  
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG KP    Y   +  Y K G L+DAE ++ +MER GV PD  TY++LID   + G  + 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 389 ARIVLKEMEVSHAKPNSFIYSRIL----------------AGYRDRGEWQRTFQVLKEMK 432
           A   LK M  +  +PN + Y  +L                +G  +  E   T+Q+L+ M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+ P    Y+ +I  F K   L  A    D M  +G+ P+   +  LI C      ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A      M E G+ P   +Y +++  L  +  +E VK L  ++   G   + V +  L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 553 DIYGQSGRFDDAIECL 568
           D   ++G  D   + L
Sbjct: 938 DGLLKAGYVDICFQML 953



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 178/414 (42%), Gaps = 69/414 (16%)

Query: 301 ATYAAVITALSNSGRTIE-----AEAVFEELKESG---LKPRTKAYNALLKGYVKMGYLK 352
           A Y  ++ ++ N   T E     A+A+ + ++ +G   L    K YN  L+   +    +
Sbjct: 107 AQYERLVVSMLNCSDTAEDMRVSADAI-QAIRRTGSARLALSPKCYNFALRSLARFDMTE 165

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
               V S++ + G+LPD  TY+ +I +Y   G   +A    + +     +P +F  + ++
Sbjct: 166 YMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALV 225

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA----------- 461
            GY   GE ++   +   M   G + + + Y ++I    +  C+  A+            
Sbjct: 226 LGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCS 285

Query: 462 ------------------------AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                                    FD M   G+ P  +T+N +I  + K GR + A ++
Sbjct: 286 PNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI 345

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            E M++ G  P   TYN +I  L +Q + E+ + LL N   +G  P VVT+T L++ Y  
Sbjct: 346 KELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 404

Query: 558 SGRFDDAI---------ECLEGLS---------------DQAVNAFRVMRTDGLKPSNLA 593
           + +FDDA+         +C   L                 +A      +  +GL P+ + 
Sbjct: 405 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVIT 464

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             S+I+ + +  +   A  VL+ M+ +G +P+  TY +LM  L++  K HK  +
Sbjct: 465 YTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 518



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 179/452 (39%), Gaps = 67/452 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           + +LL+  C  +   D A+ +   ++++ L    E  Y++L  AL   GR+E+ Y +F++
Sbjct: 535 YTTLLQGQCDEHD-FDNAFRLFEMMEQNGL-KPDEHAYAVLTDALCKAGRAEEAY-SFIV 591

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +   LT + Y  LI   ++  + + A  L+ +M  +G   D   YS+++ +L +  +++
Sbjct: 592 RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN 651

Query: 246 SSLL---QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +L    Q   + I+C  I     L+++++    + G    A R        G  P   T
Sbjct: 652 EALPILDQMSLRGIKC-TIFAYTILIDEML----REGKHDHAKRMYNEMTSSGHKPSATT 706

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF------ 356
           Y   I +    GR  +AE +  +++  G+ P    YN L+ G   MGY+ D  F      
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI-DRAFSTLKRM 765

Query: 357 ----------------------------------------------VVSEMERSGVLPDE 370
                                                         ++  M + G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TYS LI  +  AGR E A ++L  M      PN  IY+ ++    D   +++    +  
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G +P    Y +++             + F  +L  G   D + W  L D   K G 
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D   ++   M++R     + TY ++ N + E
Sbjct: 946 VDICFQMLSIMEKRYCCISSQTYALVTNKMHE 977


>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
 gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
          Length = 866

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 227/523 (43%), Gaps = 65/523 (12%)

Query: 153 LQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARND 207
           +Q+   C   E +Y+I+I  LGR    EK  + F  + +     +  +Y ALI++  RN 
Sbjct: 133 MQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNG 192

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
             E +L L+ +M+++      + Y+ VI S  R   +D   L  L+ E+  +        
Sbjct: 193 KYEVSLELLERMKKERVSPSILTYNTVINSCAR-GGLDWEGLLGLFAEMRHE-------- 243

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
                                      G+ P   TY  ++ A SN G   EAE VF  + 
Sbjct: 244 ---------------------------GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMN 276

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E G+ P    Y  L+  + K+  L     ++ EM  +G +P+  +Y++L++AYA  G  E
Sbjct: 277 EGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIE 336

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  V + M+ +   PN+  YS +L  Y   G +    ++  EMK S  EPD   YN +I
Sbjct: 337 DATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLI 396

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D FG+       +  F  M  E +EP+  T+  LI    K G +D A+++   M E+G  
Sbjct: 397 DVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMI 456

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG-------- 559
           P +  Y  +I   G+   +E+    L  M   G  P + TY TL+ ++ + G        
Sbjct: 457 PSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAI 516

Query: 560 --------------RFDDAIECLE--GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                          F+  IE     G  ++A+ A+  M    L P    L ++++ +  
Sbjct: 517 LLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCI 576

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
                E+    Q +K +G+ P+V+ Y  ++    + D++++ +
Sbjct: 577 AGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAY 619



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 179/400 (44%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA+ GD  +++R F  M + +   P    Y  +I+ L   G   +   +F
Sbjct: 107 LNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIF 166

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           EE+   G+     +Y AL+  Y + G  + +  ++  M++  V P   TY+ +I++ A  
Sbjct: 167 EEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARG 226

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L    +RG       V + M   GV PD   
Sbjct: 227 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITT 286

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  ++DTFGK N L         M S G  P+  ++N L++ + + G  + A  +F  MQ
Sbjct: 287 YTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQ 346

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           E G  P   TY+I++ L G+  R+++V+ L   M+     P+  TY TL+D++G+ G F 
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFK 406

Query: 563 DAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +                            GL D A      M   G+ PS+ A   +I
Sbjct: 407 EVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVI 466

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A+G+     EA   L  M E G KP + TY TL+    R
Sbjct: 467 EAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFAR 506



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 194/458 (42%), Gaps = 53/458 (11%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           Y  +IS   R   LEK  ++  +M   G      +Y+ +I S  R  K + SL  L+++ 
Sbjct: 146 YTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMK 205

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE                                        +SP   TY  VI + +  
Sbjct: 206 KE---------------------------------------RVSPSILTYNTVINSCARG 226

Query: 314 GRTIEAE-AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           G   E    +F E++  G++P    YN LL      G   +AE V   M   GV+PD  T
Sbjct: 227 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITT 286

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+D +    R +    +LKEM  +   P    Y+ +L  Y   G  +    V + M+
Sbjct: 287 YTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQ 346

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +G  P+   Y++++  +GK+         F  M     EPD  T+NTLID   + G + 
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFK 406

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
               LF +M E    P   TY  +I   G+    +D K++L +M  +G++P+   YT ++
Sbjct: 407 EVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVI 466

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           + YGQ+  +++A+  L  +++            G KP+    N+LI  F       E  A
Sbjct: 467 EAYGQAAMYEEALVTLNTMNEM-----------GSKPTIETYNTLIYMFARGGLYKETEA 515

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +L  M + G+  +  ++  +++   +  +F +   +Y+
Sbjct: 516 ILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYV 553



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 194/476 (40%), Gaps = 87/476 (18%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           Y+ LI++ GR+ K   +  L +R   +R++P  LTYN +I++CAR   D E  L L ++M
Sbjct: 181 YTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEM 240

Query: 220 RQDGYHCDFINY-----------------------------------SLVIQSLTRTNKI 244
           R +G   D + Y                                   + ++ +  + N++
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRL 300

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D   + +L KE+       +    N ++  +A+ G+   A     + Q  G  P   TY+
Sbjct: 301 DK--VSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYS 358

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK------------ 352
            ++      GR  E   +F E+K S  +P    YN L+  + + GY K            
Sbjct: 359 ILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEE 418

Query: 353 -----------------------DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
                                  DA+ ++  M   G++P    Y+ +I+AY  A  +E A
Sbjct: 419 NVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEA 478

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            + L  M    +KP    Y+ ++  +   G ++ T  +L +M   GV  +   +N +I+ 
Sbjct: 479 LVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEG 538

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F +      A+ A+  M    + PD  T   ++  +   G  D + E F+E++  G  P 
Sbjct: 539 FRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPN 598

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ--SGRFDD 563
              Y +M+ +  + +RW +   LL  M     L N    + +  + GQ   G FDD
Sbjct: 599 VMCYCMMLAVYAKSDRWNEAYELLDEM-----LTNRA--SNIHQVIGQMIKGDFDD 647



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 13/234 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++ +   +  RG+WQR+ ++ K M+     +P+ H Y +MI   G+   L      F+ M
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEM 169

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE-R 525
            + G+     ++  LI+ + + G+Y+ + EL E M++    P   TYN +IN        
Sbjct: 170 GAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLD 229

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           WE +  L   MR +G+ P++VTY TL  +   S R         GL D+A   FR M   
Sbjct: 230 WEGLLGLFAEMRHEGIQPDIVTYNTL--LCACSNR---------GLGDEAEMVFRTMNEG 278

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           G+ P       L++ FG+  R  +   +L+ M   G  P++ +Y  L++A  R+
Sbjct: 279 GVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARI 332



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/396 (21%), Positives = 163/396 (41%), Gaps = 14/396 (3%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+ A  R   + +A   F L Q     P   TY+ L+    ++   ++   L  +M+
Sbjct: 322 YNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMK 381

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D   Y+ +I            +   L+ ++  + +E + +    +I    K G 
Sbjct: 382 VSNTEPDAATYNTLIDVFGEGGYFKEVV--TLFHDMAEENVEPNMETYEGLIFACGKGGL 439

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A + L      G+ P +  Y  VI A   +    EA      + E G KP  + YN 
Sbjct: 440 HDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNT 499

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + + G  K+ E ++ +M   GV  +  +++ +I+ +   G++E A     EME S 
Sbjct: 500 LIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSR 559

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+      +L+ Y   G    + +  +E+K+SG+ P+   Y +M+  + K +  + A 
Sbjct: 560 LVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAY 619

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN- 518
              D ML+            +I   F     +   E +F+++   G       YN ++  
Sbjct: 620 ELLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEA 679

Query: 519 --LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              LG++ER     R+LG    +G  P +   + LV
Sbjct: 680 LWWLGQKER---AVRVLGEATKRGHFPELFRKSKLV 712


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 223/479 (46%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G+   +     L     +   +    +Y   I    +    ++A  +++KM 
Sbjct: 323 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D I ++++IQ L    +I  +  + ++ +++    + D      ++  F   GD
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDA--KDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 440

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   M      +  G +     Y AVI AL   GR  EA  +F+E+K+ G+ P   +YN+
Sbjct: 441 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 500

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K     DA  +   M+  G  P+ +T+ L I+ Y  +G    A    + M+   
Sbjct: 501 LISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 560

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+    + +L G    G      +V  E+K+ GV PDT  Y +MI    K +    A+
Sbjct: 561 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 620

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+     PD +  N+LID  +K GR D A  +F +++E    P   TYN ++  L
Sbjct: 621 KIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGL 680

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G + + ++V  LL  M      PN++TY T++D   ++G  +DA++ L            
Sbjct: 681 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS---------- 730

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            M T G  P   + N++I    +++R  EAF++   MK+  L PD  T  T++ + +++
Sbjct: 731 -MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKI 787



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 231/503 (45%), Gaps = 22/503 (4%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  L   L+ + G   +  E + +     + P   TY+ L+ A  +  D+E  L L+ 
Sbjct: 286 YTYNGLVYFLVKS-GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR 344

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M   G   +  +Y++ I+ L +  + D +  +L K+  E  C    +   +L  V+   
Sbjct: 345 EMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENE-GCKPDVITHTVLIQVLCDA 403

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +  DA     F  M +     P   TY  ++    ++G +     ++  +K  G     
Sbjct: 404 GRISDAKDV--FWKMKKS-DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AY A++    ++G + +A  +  EM++ G++P++++Y+ LI  +  A R+  A  + K 
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKH 520

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M++   KPN + +   +  Y   GE  +  Q  + MKS G+ PD    N ++    K   
Sbjct: 521 MDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGR 580

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A   F  + + G+ PDTIT+  +I C  K  ++D A ++F +M E    P     N 
Sbjct: 581 LGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNS 640

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L +  R ++  R+   ++   L P   TY TL+   G+ G+  + +  LE      
Sbjct: 641 LIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE------ 694

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M      P+ +  N++++   ++    +A  +L  M   G  PD+ +Y T++  
Sbjct: 695 -----EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749

Query: 636 LIRVDKFHKVFSSYLFFNIYKML 658
           L++ +++++ FS  +F  + K+L
Sbjct: 750 LVKEERYNEAFS--IFCQMKKVL 770



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 210/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+   GR   + E F + QRQ  +    T+ A+         L  A   +  M++ G   
Sbjct: 224 LMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 283

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ ++  L ++   D   L+ +Y+ +  D +    +  + ++V F K  D    + 
Sbjct: 284 NAYTYNGLVYFLVKSG-FDREALE-VYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 341

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  +++  G KP    +  L++   
Sbjct: 342 LLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC 401

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G + DA+ V  +M++S   PD  TY  L+D + + G  +S   +   M+      N  
Sbjct: 402 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVV 461

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G      ++  EMK  G+ P+ + YN +I  F K +    A+  F  M
Sbjct: 462 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHM 521

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G +P+  T    I+ + K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 522 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 581

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++ +F           D+AV  F  M  + 
Sbjct: 582 GMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF-----------DEAVKIFYDMIENN 630

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LA+NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 631 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 690



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 2/368 (0%)

Query: 197  NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            ++L+    +   +EK++     +   G   D      +I+ L +  K   +   +L K+ 
Sbjct: 814  HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEA--HELVKKF 871

Query: 257  ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
            +   + L   L N +I G         A       + +G  P   TY  ++ A+  S R 
Sbjct: 872  KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRI 931

Query: 317  IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             E   V EE+   G +     YN ++ G VK   L+ A  +   +   G  P   TY  L
Sbjct: 932  EEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPL 991

Query: 377  IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
            +D    AGR E A  +  EM     K N  IY+ +L G+R  G  ++   + ++M   G+
Sbjct: 992  LDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGI 1051

Query: 437  EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             PD   Y ++IDT  K   L+  +  F ++L  G+EPD IT+N LID   K  R + A  
Sbjct: 1052 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVS 1111

Query: 497  LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
            LF EMQ++G  P   TYN +I  LG+  +  +  ++   +  +G  PNV TY  L+  Y 
Sbjct: 1112 LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYS 1171

Query: 557  QSGRFDDA 564
             SG  D A
Sbjct: 1172 VSGSTDSA 1179



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 229/530 (43%), Gaps = 50/530 (9%)

Query: 144  DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
            D A+ +   L++ NL    +  Y+ L+  LGR  K+ E   L +        P  +TYN 
Sbjct: 652  DEAWRIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710

Query: 199  LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEI 256
            ++    +N  +  AL+++  M   G   D  +Y+ VI  L +  + +   S+  ++ K +
Sbjct: 711  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 770

Query: 257  ECD------------KIEL-------------------DGQLLNDVIVGFAKAGDASKAM 285
              D            KI L                   D    + ++ G  K     K++
Sbjct: 771  IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 830

Query: 286  RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             F  +    G++        +I  L    + +EA  + ++ K  G+  +T  YN+L+ G 
Sbjct: 831  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 890

Query: 346  VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            V    +  AE + +EM+  G  PDE TY+LL+DA   + R E    V +EM     +   
Sbjct: 891  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 950

Query: 406  FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              Y+ I++G       ++   +   + S G  P    Y  ++D   K   +  A   F+ 
Sbjct: 951  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010

Query: 466  MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
            ML  G + +   +N L++ H   G  ++   LF++M ++G  P   +Y I+I+ L +  +
Sbjct: 1011 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1070

Query: 526  WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
              D       +   GL P+++TY  L+D  G+S R            ++AV+ F  M+  
Sbjct: 1071 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL-----------EEAVSLFNEMQKK 1119

Query: 586  GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            G+ P+    NSLI   G+  + AEA  + + +   G KP+V TY  L++ 
Sbjct: 1120 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 218/505 (43%), Gaps = 26/505 (5%)

Query: 129  WHSLLKNLCSS---NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-- 183
            ++++L  LC +   N ++D+ Y++ +       C      Y+ +I+ L + E+  EAF  
Sbjct: 708  YNTILDCLCKNGAVNDALDMLYSMTT-----KGCIPDLSSYNTVIYGLVKEERYNEAFSI 762

Query: 184  LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTR 240
                ++ L P   T   ++ +  +   +++AL+++     Q G   D  +   +++ + +
Sbjct: 763  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 822

Query: 241  TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
               I+ S+  +  + I    I LD   L  +I    K   A +A   +   +  G+S KT
Sbjct: 823  KAGIEKSI--EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 880

Query: 301  ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
              Y ++I  L +      AE +F E+KE G  P    YN LL    K   +++   V  E
Sbjct: 881  GLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 940

Query: 361  MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            M R G      TY+ +I     + R E A  +   +      P    Y  +L G    G 
Sbjct: 941  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000

Query: 421  WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +    +  EM   G + +   YN++++              F  M+ +GI PD  ++  
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1060

Query: 481  LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            +ID   K G+ +     F ++ E G  P   TYN++I+ LG+ +R E+   L   M+ +G
Sbjct: 1061 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1120

Query: 541  LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            ++PN+ TY +L+   G++G+           + +A   +  + T G KP+    N+LI  
Sbjct: 1121 IVPNLYTYNSLILHLGKAGK-----------AAEAGKMYEELLTKGWKPNVFTYNALIRG 1169

Query: 601  FGEDQRDAEAFAVLQYMKENGLKPD 625
            +        A+A    M   G  P+
Sbjct: 1170 YSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 170/365 (46%), Gaps = 12/365 (3%)

Query: 270 DVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           DVI     A   ++A+ RF   A+   ++  TA+   ++  +   GR  +   VF+ ++ 
Sbjct: 184 DVIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQR 243

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             +K     + A+  G    G L+ A   +  M+ +G++ + +TY+ L+     +G    
Sbjct: 244 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 303

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  V + M V    P+   YS ++  +  R + +    +L+EM++ GV+P+ + Y + I 
Sbjct: 304 ALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 363

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             G+      A     +M +EG +PD IT   LI      GR   A+++F +M++    P
Sbjct: 364 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 423

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +++  G+    + V  +   M+A G   NVV YT ++D   Q GR  +A+E  
Sbjct: 424 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-- 481

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M+  G+ P   + NSLI+ F +  R  +A  + ++M  +G KP+  T
Sbjct: 482 ---------MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYT 532

Query: 629 YTTLM 633
           +   +
Sbjct: 533 HVLFI 537



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/532 (22%), Positives = 225/532 (42%), Gaps = 23/532 (4%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
            P  + ++++   CS  S  D A  +   + ++N C    L  + LI  L   GR ++ + 
Sbjct: 598  PDTITYTMMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWR 656

Query: 182  AFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             F   +   L P   TYN L++   R   +++ ++L+ +M    Y  + I Y+ ++  L 
Sbjct: 657  IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 716

Query: 240  RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            +   ++ +L   LY       I  D    N VI G  K    ++A       + V L P 
Sbjct: 717  KNGAVNDAL-DMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 773

Query: 300  TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVK-MGYLKDAEFV 357
             AT   ++ +    G   EA  + ++   + G K    + ++L++G +K  G  K  EF 
Sbjct: 774  YATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFA 833

Query: 358  VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
               +  SG+  D+     LI       +   A  ++K+ +       + +Y+ ++ G  D
Sbjct: 834  -EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVD 892

Query: 418  RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                     +  EMK  G  PD   YN+++D  GK   +   +   + M  +G E   +T
Sbjct: 893  ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 952

Query: 478  WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            +NT+I    K  R ++A +L+  +  +G+ P   TY  +++ L +  R ED + L   M 
Sbjct: 953  YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 1012

Query: 538  AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
              G   N   Y  L++ +  +G  +      + + DQ +N           P   +   +
Sbjct: 1013 EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN-----------PDIKSYTII 1061

Query: 598  INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            I+   +  +  +     + + E GL+PD++TY  L+  L +  +  +  S +
Sbjct: 1062 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1113



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 24/357 (6%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA-------LLKGYVKMGYLKDAEFVV 358
           VI AL ++    EA    E  + +  KPR     A       L++G+ ++G   D   V 
Sbjct: 185 VIHALRSADGPAEA---LERFRSAARKPRVAQTTASCNYMLELMRGHGRVG---DMAEVF 238

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M+R  V  +  T++ +       G   SA + L  M+ +    N++ Y+ ++      
Sbjct: 239 DVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKS 298

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  +   +V + M   GV P    Y+V++  FGK   +   +     M + G++P+  ++
Sbjct: 299 GFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY 358

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
              I    +  R+D A  +  +M+  G  P   T+ ++I +L +  R  D K +   M+ 
Sbjct: 359 TICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKK 418

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
               P+ VTY TL+D +G +G            S   +  +  M+ DG   + +A  ++I
Sbjct: 419 SDQKPDRVTYITLLDKFGDNGD-----------SQSVMEIWNAMKADGYNDNVVAYTAVI 467

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
           +A  +  R  EA  +   MK+ G+ P+  +Y +L+   ++ D+F      +   +I+
Sbjct: 468 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIH 524


>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 754

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 226/533 (42%), Gaps = 100/533 (18%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    EK  E F  + +     +  +Y ALI++  R+
Sbjct: 131 YMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRH 190

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              E +L L+ +M+++      + Y+ VI S  R   ++   L  L+ E+  +       
Sbjct: 191 GQYEVSLELLERMKKEKVTPSILTYNTVINSCARGG-LNWEGLLSLFAEMRHE------- 242

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                                       G+ P   TY  ++ A +N G   EAE VF  +
Sbjct: 243 ----------------------------GIQPDIITYNTLLNACANRGLGDEAEMVFRTM 274

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            E G+ P    Y  L++ + K+  L+    ++ EME SG LPD  +Y++L++AYA+ G  
Sbjct: 275 NEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDI 334

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  V ++M+ +   PN+  YS +L  Y   G +    ++  EMK S  EPD   YNV+
Sbjct: 335 RHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVL 394

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ FG+       +  F  M+ E +EP+  T+  LI    K G ++ A+++   M E+G 
Sbjct: 395 IEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGI 454

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI------------ 554
            P T  Y  +I   G+   +E+   +   M   G  P V TY +L+++            
Sbjct: 455 VPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEA 514

Query: 555 -----------------------YGQSGRFDDAIE------------------------C 567
                                  Y Q G+F++AI+                        C
Sbjct: 515 IMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYC 574

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
             GL D++   FR +R  G+ PS +    +I  +    R  +A+ VL  M  N
Sbjct: 575 TAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTN 627



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 177/400 (44%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA+ GD  +++R F  M + +   P    Y  +I+ L   G   ++  +F
Sbjct: 106 LNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIF 165

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           EE+   G+     +Y AL+  Y + G  + +  ++  M++  V P   TY+ +I++ A  
Sbjct: 166 EEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARG 225

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L    +RG       V + M   G+ PD   
Sbjct: 226 GLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITT 285

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  +++TFGK N L         M S G  PD  ++N L++ +   G    A  +F +MQ
Sbjct: 286 YRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQ 345

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           E    P   TY++++NL G   R++DV+ L   M+     P+V TY  L++++G+ G F 
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405

Query: 563 DAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +                            GL + A      M   G+ PS  A   +I
Sbjct: 406 EVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVI 465

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A+G+     EA  +   M E G KP V TY +L+    R
Sbjct: 466 EAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFAR 505



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 206/449 (45%), Gaps = 15/449 (3%)

Query: 204 ARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           A+  D +++L L   M RQ     +   Y+++I  L R   ++ S   ++++E+    + 
Sbjct: 117 AQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKS--TEIFEEMPTHGVP 174

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE-A 321
                   +I  + + G    ++  L   +   ++P   TY  VI + +  G   E   +
Sbjct: 175 RSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLS 234

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E++  G++P    YN LL      G   +AE V   M   G++PD  TY  L++ + 
Sbjct: 235 LFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFG 294

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              + E    +LKEME S   P+   Y+ +L  Y  +G+ +    V ++M+ +   P+  
Sbjct: 295 KLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAV 354

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+++++ +G +         F  M     EPD  T+N LI+   + G +     LF +M
Sbjct: 355 TYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDM 414

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E    P   TY  +I   G+    ED K++L +M  +G++P+   YT +++ YGQ+  +
Sbjct: 415 VEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASY 474

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           ++A+             F  M   G KP+    NSLIN F       E+ A++  M E+G
Sbjct: 475 EEALV-----------MFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESG 523

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  D  ++  +++   +  +F +   +Y+
Sbjct: 524 VARDRDSFNGVIEGYRQGGQFEEAIKTYV 552



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 200/426 (46%), Gaps = 9/426 (2%)

Query: 164 LLYSILIHALGRS----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           L Y+ +I++  R     E L   F   + + + P  +TYN L++ACA     ++A  +  
Sbjct: 213 LTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFR 272

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   D   Y  ++++  + NK++   + +L KE+E      D    N ++  +A 
Sbjct: 273 TMNEGGMVPDITTYRNLVETFGKLNKLEK--VSELLKEMESSGNLPDISSYNVLLEAYAS 330

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD   AM      Q     P   TY+ ++      GR  +   +F E+K S  +P    
Sbjct: 331 KGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGT 390

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L++ + + GY K+   +  +M    V P+  TY  LI A    G  E A+ +L  M+
Sbjct: 391 YNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMD 450

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P++  Y+ ++  Y     ++    +   M   G +P    YN +I+ F +     
Sbjct: 451 EKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYK 510

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            + A   +M   G+  D  ++N +I+ + + G+++ A + + E+++  + P   T+  ++
Sbjct: 511 ESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVL 570

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL-EGLSDQAV 576
           ++       ++ +     +RA G+LP+V+ Y  ++ +Y +S R+DDA E L E ++++  
Sbjct: 571 SVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVS 630

Query: 577 NAFRVM 582
           N  +V+
Sbjct: 631 NIHQVV 636



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 179/417 (42%), Gaps = 14/417 (3%)

Query: 103 LASSPSSLNRVE-----FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           L  +   LN++E      K  ES   +P    +++L    +S   I  A  V   +Q+  
Sbjct: 289 LVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348

Query: 158 LCYSYELLYSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKA 212
            C    + YS+L++     GR + + E FL  +     P   TYN LI         ++ 
Sbjct: 349 -CVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEV 407

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           + L   M ++    +   Y  +I +  +    + +  +K+   ++   I    +    VI
Sbjct: 408 VTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDA--KKILLHMDEKGIVPSTKAYTGVI 465

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             + +A    +A+        +G  P   TY ++I   +  G   E+EA+  ++ ESG+ 
Sbjct: 466 EAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVA 525

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
               ++N +++GY + G  ++A     E+E++   PDE T+  ++  Y  AG  + +   
Sbjct: 526 RDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQ 585

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT-FG 451
            +E+  S   P+   Y  ++A Y     W   ++VL EM ++ V         M+   + 
Sbjct: 586 FREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYD 645

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            Y+        FD++ SEG       +NTL++  +  G+ +RA  +  E  +RG FP
Sbjct: 646 DYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGLFP 702



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 170/406 (41%), Gaps = 34/406 (8%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+ A      +  A   F   Q  R  P  +TY+ L++    +   +    L  +M+
Sbjct: 321 YNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMK 380

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D   Y+++I+           +   L+ ++  + +E +      +I    K G 
Sbjct: 381 VSNTEPDVGTYNVLIEVFGEGGYFKEVV--TLFHDMVEENVEPNMGTYEGLIYACGKGGL 438

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A + L      G+ P T  Y  VI A   +    EA  +F  + E G KP  + YN+
Sbjct: 439 HEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNS 498

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + + G  K++E ++ +M  SGV  D  +++ +I+ Y   G++E A     E+E + 
Sbjct: 499 LINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKAR 558

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   +  +L+ Y   G    + +  +E+++SG+ P    Y +MI  + + N    A 
Sbjct: 559 FQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAY 618

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGR-----------YDRAEELFEEMQERGYFPC 509
              D M++          N + + H   G+           +   E +F+++   G    
Sbjct: 619 EVLDEMVT----------NKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLG 668

Query: 510 TTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              YN ++     LG++ER     R+L     +GL P +   + LV
Sbjct: 669 MRFYNTLLEALWWLGQKER---AARVLSEAIKRGLFPELFRKSKLV 711



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 155/382 (40%), Gaps = 16/382 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+  +  R VP  + +S+L NL   +   D    +   ++  N        Y++LI   G
Sbjct: 341 FRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGT-YNVLIEVFG 399

Query: 175 RSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
                 E   L      + + P   TY  LI AC +    E A  ++  M + G      
Sbjct: 400 EGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTK 459

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+ VI++  +    + +L+  ++  +     +   +  N +I  FA+ G   ++   + 
Sbjct: 460 AYTGVIEAYGQAASYEEALV--MFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMW 517

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G++    ++  VI      G+  EA   + EL+++  +P  + + A+L  Y   G
Sbjct: 518 KMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAG 577

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + ++E    E+  SG+LP    Y ++I  YA + RW+ A  VL EM  +       +  
Sbjct: 578 LVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVG 637

Query: 410 RILAG-YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           +++ G Y D   WQ    V  ++ S G      FYN +++          A       + 
Sbjct: 638 KMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIK 697

Query: 469 EGIEPD-----TITWNTLIDCH 485
            G+ P+      + W+  +D H
Sbjct: 698 RGLFPELFRKSKLVWS--VDVH 717


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 237/553 (42%), Gaps = 72/553 (13%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTPLTYNALI---SACARNDDLEKALNLMSKM 219
           ++ILI +  R+ +  +A   F + +R+R  P  +  LI     C    D EKA  +  +M
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD-EKAFEVFHEM 215

Query: 220 RQDGY-HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
              G+   D   ++ ++++L +  ++  +  ++++ ++E      D    N +I G AKA
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEA--REVFGQMEKCGFPPDAIAYNTMIDGLAKA 273

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G A +A++ L         P   TY  ++ +L  +G    AE +F  +  SG +P +  Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            +L+ G+ K G +K+A  +  EM  +G  PD  T++++ID    +G +E A    +EM  
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN   Y+ I+ G    G     F+++K M + G  PD+  Y  ++D F K   L  
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 459 AMAAFDRM--------------LSEGIEPDTITWNTLID-----------------CHF- 486
           A    D +              L +G+       NTL D                 C   
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSII 513

Query: 487 ----KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQERWEDVKRLLGNMRAQG 540
               K GR D A  +F+ M   G  P  TTYNI+IN L    + R E    LL ++   G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG 573

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAV 576
            LP+ VTYT L     + G  D A++                        C +G  D+AV
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAV 633

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + F+ M   G  P   A   +IN   + ++  +A      M   G KP V TYT L++AL
Sbjct: 634 SLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693

Query: 637 IRVDKFHKVFSSY 649
                  + F  +
Sbjct: 694 CHAGNVDEAFHRF 706



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 217/480 (45%), Gaps = 32/480 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KL 252
            TYN L++      +  +   +  +M + G   +  +++++I+S  RT + D ++   ++
Sbjct: 120 FTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEI 179

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAVITALS 311
            K   C K +L   L+  ++    KAG   KA         +G + P  A + A++  L 
Sbjct: 180 MKRKRC-KPDLHTFLI--LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLL 236

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + R  EA  VF ++++ G  P   AYN ++ G  K G+ ++A  V+  M     +P E 
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY +L+++   AG  E A  + + M  S  +PNS IY+ ++ G+   G  +    +  EM
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             +G  PD   + VMID   K      A  +F+ M+  G +P+ +T+ T+I    K GR 
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  + + M   G FP + TY  +++   +  R ++  +LL  +      PN+  Y++L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 552 VDIYGQSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG 586
           V      G  ++ ++                         C  G  D+A   F+ M ++G
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 587 LKPSNLALNSLINAF--GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            KP     N LIN      + R   AFA+L  ++  G  PD VTYT L   L ++ +  +
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 230/585 (39%), Gaps = 105/585 (17%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           L++ ++  L +++++ EA   F   ++    P  + YN +I   A+    ++AL ++  M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                    + Y +++ SL +   ++ +  ++L++ +       +  +   +I GFAK+G
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERA--EELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A          G  P   T+  +I  L  SG   +A   FEE+   G KP    Y 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +++G  K+G + +A  ++  M   G  PD  TY  L+D +   GR + A  +L E++  
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTF---------------------------------- 425
            + PN  +YS ++ G  D G  + T                                   
Sbjct: 465 SSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDE 524

Query: 426 --QVLKEMKSSGVEPDTHFYNVMIDTF--GKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
             ++ + M S G +PD   YN++I+     + N +  A A    +   G  PD +T+  L
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584

Query: 482 ---------ID------------------------CHFKC--GRYDRAEELFEEMQERGY 506
                    +D                        C   C  G+ DRA  LF+EM  +G 
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P    Y  +IN L + ++ ED  +    M  +G  P V TYT LV     +G  D+A  
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704

Query: 567 CLEGL-------------------------SDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             EG+                          D A+  F  M + G  P+ +   SL +  
Sbjct: 705 RFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
               +  +A  +LQ M   G  P   T+T ++  L + D+  K+ 
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLL 809



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 171/383 (44%), Gaps = 18/383 (4%)

Query: 265 GQLLNDVIVGFAKA----GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           GQ+L   +    ++    G A    R+ G  +  G      TY  ++  L       +  
Sbjct: 82  GQVLGSHVAAVLRSLKVTGTAISFFRWAG--EQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           A+ EE+ ++G+ P T ++N L++ + +     DA      M+R    PD HT+ +L+D  
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 381 ANAGRWESARIVLKE-MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
             AG  E A  V  E M +    P+  +++ ++         +   +V  +M+  G  PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN MID   K      A+   D ML++   P  +T+  L++   K G  +RAEELF 
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M   G+ P +  Y  +I+   +  R ++   L   M   G  P+V+T+T ++D   +SG
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            F           +QA  +F  M   G KP+ +   ++I    +  R A AF +++ M  
Sbjct: 380 NF-----------EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 620 NGLKPDVVTYTTLMKALIRVDKF 642
           +G  PD VTY  L+    ++ + 
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRL 451



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 12/289 (4%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E++G   D  TY+ L++       +     + +EM  +   PN+F ++ ++  +      
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNT 480
                  + MK    +PD H + +++D   K      A   F  M++ G + PD      
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++    K  R   A E+F +M++ G+ P    YN MI+ L +    ++  ++L NM A+ 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            +P  VTY  LV+   ++G  + A E            FRVM   G +P+++   SLI+ 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEE-----------LFRVMAASGFRPNSVIYTSLIHG 339

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           F +  R  EA ++   M E G +PDV+T+T ++  L +   F +   S+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 221/473 (46%), Gaps = 16/473 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N LI+       +  +  ++ K+ + GY  + I  + +++ L    ++  SL    + 
Sbjct: 47  TLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSL--HFHD 104

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     ++D      ++ G  K G+   A++ L M +     P    Y  +I  L    
Sbjct: 105 KVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDK 164

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  ++ E+   G+ P    Y+ L+ G+   G L +A  +++EM    + P+ +TY+
Sbjct: 165 LVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYT 224

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+DA    G+ + A+ +L  M     KPN   Y+ ++ GY   GE Q   Q+   M   
Sbjct: 225 ILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV P+ + YN+MID   K   +  AM     +L + + P+T+T+++LID   K GR   A
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L +EM  RG      TY  +++ L + +  +    L   M+ +G+ PN  TYT L+D 
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             + GR  +A +            F+ +   G + +    N +I+   ++    EA A+ 
Sbjct: 405 LCKGGRHKNAQK-----------LFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMK 453

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYLFFNIYKMLSYSGEK 664
             M+ENG  PD VT+  ++++L    + DK  K+    +  ++ +   + GE+
Sbjct: 454 SKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGER 506



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 192/405 (47%), Gaps = 19/405 (4%)

Query: 242 NKIDSSLLQ--------KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           NKI  SL++         L+K+++   IE D   LN +I  F   G  + +   LG    
Sbjct: 14  NKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILK 73

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +G  P T T   ++  L   G   ++    +++   G +    +Y  LL G  K+G  + 
Sbjct: 74  LGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRS 133

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++  +E     P+   Y+ +ID          A  +  EM+     PN   YS ++ 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+   G+    F +L EM    + P+ + Y +++D   K   +  A      M  EG++P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + +++NTL+D +   G    A+++F  M ++G  P   +YNIMI+ L + +R ++   LL
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             +  + ++PN VTY++L+D + + GR   A++ L+ +  +   A  V  T         
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT--------- 364

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             SL++A  ++Q   +A A+   MKE G++P+  TYT L+  L +
Sbjct: 365 --SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 20/328 (6%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +N ++   VKM +   A  +  +M+  G+ PD  T ++LI+ + + G+   +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +PN+   + ++ G   +GE +++     ++ + G + D   Y  +++   K
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A+     +      P+ + +NT+ID   K    + A +L+ EM  RG FP   T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +I       +  +   LL  M  + + PNV TYT L+D             C EG  
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL-----------CKEGKV 236

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            +A N   VM  +G+KP+ ++ N+L++ +   GE Q   + F     M + G+ P+V +Y
Sbjct: 237 KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMF---HTMVQKGVNPNVYSY 293

Query: 630 TTLMKALI---RVDKFHKVFSSYLFFNI 654
             ++  L    RVD+   +    L  N+
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNM 321



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 17/173 (9%)

Query: 96  NSESASALASSPSSLNRVEFKL---AESY-RAVPAPL--WHSLLKNLCSSNSSIDLAYAV 149
           N+ + S+L      L R+   L    E Y R  PA +  + SLL  LC  N ++D A A+
Sbjct: 324 NTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK-NQNLDKATAL 382

Query: 150 VSWLQKHNLCYSYELLYSILIHAL---GR---SEKLYEAFLLSQRQRLTPLTYNALISAC 203
              +++  +    +  Y+ LI  L   GR   ++KL++  LL +  R+   TYN +IS  
Sbjct: 383 FMKMKERGI-QPNKYTYTALIDGLCKGGRHKNAQKLFQ-HLLVKGCRINVWTYNVMISGL 440

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            +   L++AL + SKM ++G   D + + ++I+SL   ++ D +  +KL  E+
Sbjct: 441 CKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA--EKLLHEM 491


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 234/531 (44%), Gaps = 40/531 (7%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSK 218
           L ++ +I+ L +  K+ EA L+  +     L P   TY +LI    RN  L+KA  +  +
Sbjct: 198 LTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDR 257

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +DG + + + YS +I  L    +I  ++   + +E+    IE         I      
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAM--DMLEEMTEKGIEPTVYTYTVPISSLCDI 315

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A+  +      G SP   TY A+I+ L  +G+   A  ++ ++ + GL P T  Y
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY 375

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+      G    A  +   ME  G L +  TY+ +I         E A +V  +M  
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLK 435

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P    Y+ ++     RG      + L  MK S  EPD   Y  +I  F K   L  
Sbjct: 436 DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F  ML  GI P+  T+  +ID + K G+ D A  LFE M+E G      TYN +I+
Sbjct: 496 ATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIIS 555

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------CLE 569
            L +  R+ + ++    M  QGL PN +TYT+L++   ++   + A +         CL 
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615

Query: 570 ----------GLSDQA-VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                     GL  +  V+A   +  +G +P+    ++L++    + R  EA  +++ MK
Sbjct: 616 NAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFH-----------KVFSSYLFFNIYKML 658
           E GL P +  Y +L+ A  +  K             K F  +LF  IYK+L
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF--IYKVL 724



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 227/546 (41%), Gaps = 51/546 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           + SL+   C  N  +D A+ V   + K   C    + YS LI+ L    ++ EA      
Sbjct: 235 YTSLILGHCR-NRKLDKAFEVFDRMVKDG-CNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  +    T  TY   IS+      ++ A+NL+  M + G       Y+ +I  L R  K
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ ++   +Y ++  + +  +    N +I      G    A++     +G G      TY
Sbjct: 353 MELAI--GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTY 410

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L       +A  VF ++ + G  P    YN L+   +K GYL +A   +  M+ 
Sbjct: 411 NQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKE 470

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           S   PDE TY  LI  +   G+ +SA     EM      PN + Y+ ++ GY   G+   
Sbjct: 471 SNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDV 530

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + + M+ +G       YN +I    K N    A     +M  +G++P+TIT+ +LI+
Sbjct: 531 ALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLIN 590

Query: 484 CHFKCGRYDRAEELFEEMQ-------------------------------ERGYFPCTTT 512
              K    + A ++F EM+                               E G  P   T
Sbjct: 591 GLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDT 650

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +++ L  + R  +  +L+ NM+ +GL P++  Y +L+  + +S + D A+E      
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALE------ 704

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                 F +M   G +P       LI A     R  EA  + Q + +     D++ +T L
Sbjct: 705 -----IFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759

Query: 633 MKALIR 638
           +  L++
Sbjct: 760 VDGLLQ 765



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 199/477 (41%), Gaps = 30/477 (6%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL- 249
            T  ++N L+    + D +  A N+ +++   G     + ++ +I  L +  K+  ++L 
Sbjct: 160 FTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLV 219

Query: 250 -QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             K+++   C     D      +I+G  +     KA          G +P + TY+ +I 
Sbjct: 220 FNKIFQFDLCP----DAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLIN 275

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L N GR  EA  + EE+ E G++P    Y   +     +G + DA  +V  M + G  P
Sbjct: 276 GLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSP 335

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
              TY+ +I     AG+ E A  +  +M      PN+  Y+ ++      G +    ++ 
Sbjct: 336 SVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIF 395

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M+  G   +   YN +I      + +  AM  F++ML +G  P  +T+NTLI  + K 
Sbjct: 396 DWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKR 455

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  + A      M+E    P   TY  +I+   +  + +        M   G+ PN  TY
Sbjct: 456 GYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY 515

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FRVMRT 584
           T ++D Y + G+ D A+   E + +   +A                           M  
Sbjct: 516 TAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            GL+P+ +   SLIN   ++     AF +   M++    P+  TYT+L+  L +  K
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 203/478 (42%), Gaps = 51/478 (10%)

Query: 199 LISACARNDDLEKALNLMSKMRQ-DGYHCDFINYSL--VIQSLTRTNKIDSSLLQKLYKE 255
           +I AC   D+L++  + +  +   D     F  YS   ++  L + + + S+  Q +Y +
Sbjct: 130 MIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSA--QNVYAQ 187

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           I    ++      N +I    K G   +A+          L P   TY ++I     + +
Sbjct: 188 IFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRK 247

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  VF+ + + G  P +  Y+ L+ G    G + +A  ++ EM   G+ P  +TY++
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            I +  + GR + A  +++ M      P+   Y+ I++G    G+ +    +  +M   G
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367

Query: 436 VEPDTHFYNVMID---TFGKYNC--------------------------------LHHAM 460
           + P+T  YN +I+   T G++                                  +  AM
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F++ML +G  P  +T+NTLI  + K G  + A      M+E    P   TY  +I+  
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  + +        M   G+ PN  TYT ++D Y           C EG  D A++ F 
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGY-----------CKEGKIDVALSLFE 536

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            M  +G   S    N++I+   +  R +EA      M E GL+P+ +TYT+L+  L +
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 24/399 (6%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +++   K    + A          G+ P   T+  +I  L   G+  EA  VF ++ 
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  L P    Y +L+ G+ +   L  A  V   M + G  P+  TYS LI+   N GR  
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +L+EM     +P  + Y+  ++   D G       +++ M   G  P    Y  +I
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               +   +  A+  + +ML EG+ P+T+T+N LI+     GR+  A ++F+ M+  G  
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
               TYN +I  L   +  E    +   M   G  P VVTY TL+    + G  ++A   
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C  G  D A + F  M   G+ P+     ++I+ + +
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           + +   A ++ + M+ENG    + TY  ++  L + ++F
Sbjct: 525 EGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRF 563



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 168/369 (45%), Gaps = 8/369 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY-SLVIQSLTRTNKIDSSLLQKLY 253
           TYN +I      DD+EKA+ + +KM +DG     + Y +L++++L R    +++    + 
Sbjct: 409 TYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMM 468

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE  C   E D +   ++I GF K G    A  F       G+SP   TY A+I      
Sbjct: 469 KESNC---EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKE 525

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   A ++FE ++E+G     + YNA++ G  K     +AE   ++M   G+ P+  TY
Sbjct: 526 GKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITY 585

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+          A  +  EME  +  PN+  Y+ ++ G    G+        + +  
Sbjct: 586 TSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK----VDAAERLTE 641

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G EP    Y+ ++    +    + A    + M  +G+ P    + +L+  H K  + D 
Sbjct: 642 NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDC 701

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A E+F  M  +G+ P    Y ++I  L    R E+   +  ++  +    +++ +T LVD
Sbjct: 702 ALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761

Query: 554 IYGQSGRFD 562
              Q G  D
Sbjct: 762 GLLQEGDSD 770



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 18/358 (5%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           ++  ++  L        A+ V+ ++  SG+KP    +N ++    K G +++A  V +++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            +  + PD  TY+ LI  +    + + A  V   M      PNS  YS ++ G  + G  
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +L+EM   G+EP  + Y V I +      +  A+     M  +G  P   T+  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I   F+ G+ + A  ++ +M + G  P T TYN +IN L  + R+    ++   M   G 
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 542 LPNVVTYTTLVD-IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L N  TY  ++  ++G      D IE       +A+  F  M  DG  P+ +  N+LI  
Sbjct: 404 LANAQTYNQIIKGLFGM-----DDIE-------KAMVVFNKMLKDGPSPTVVTYNTLIVE 451

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKML 658
             +      A   L  MKE+  +PD  TY  L+    +  K     S   FF  Y+ML
Sbjct: 452 NLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS---FF--YEML 504



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 166/427 (38%), Gaps = 46/427 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS--EKLYEAF--L 184
           +++L+  LC+      +A  +  W++ H    + +    I+    G    EK    F  +
Sbjct: 375 YNALINELCTE-GRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L      T +TYN LI    +   L  A   +  M++     D   Y  +I    +  K+
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           DS+     Y+ ++C  I  +      +I G+ K G    A+      +  G S    TY 
Sbjct: 494 DSAT-SFFYEMLKCG-ISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A+I+ LS   R  EAE    ++ E GL+P T  Y +L+ G  K      A  +  EME+ 
Sbjct: 552 AIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
             LP+ HTY+ LI      G+ ++A    + +  +  +P    YS +++G    G     
Sbjct: 612 NCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEA 667

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP----------- 473
            Q+++ MK  G+ P    Y  ++    K   +  A+  F+ M  +G +P           
Sbjct: 668 SQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICA 727

Query: 474 ------------------------DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                                   D I W  L+D   + G  D   +    M+ R   P 
Sbjct: 728 LCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPS 787

Query: 510 TTTYNIM 516
             TY I+
Sbjct: 788 LHTYIIL 794



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 52/312 (16%)

Query: 34  SVSTITGITTATASGESSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSE 93
           S+ T   I +  + G     +  F +K   TE+          LQ     +T L+N L +
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKM--TEQ---------GLQPNTITYTSLINGLCK 594

Query: 94  NSNSESASALASSPSSLNRVEFKLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSW 152
           N+ +  A  +           F   E    +P A  + SL+  LC     +D A  +   
Sbjct: 595 NTATNLAFKI-----------FHEMEKKNCLPNAHTYTSLIYGLCQE-GKVDAAERLT-- 640

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARND 207
               N C      YS L+  L R  +  EA  L +  +   L+     Y +L+ A  ++ 
Sbjct: 641 ---ENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL 697

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDG 265
            ++ AL + + M   G+      Y ++I +L   ++ + +L   Q L K+          
Sbjct: 698 KVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKK---------- 747

Query: 266 QLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           Q  +D+IV      G  + GD+   M+FL + +    +P   TY  +   LS  G++I  
Sbjct: 748 QWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGT 807

Query: 320 EAVFEELKESGL 331
           + +   L+E  L
Sbjct: 808 DQIGNRLREVSL 819


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 213/443 (48%), Gaps = 48/443 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N ++ A  R  D+E A+ L+  M   G     + Y+ V++ L R  + D +  ++++
Sbjct: 195 VTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKA--REVF 252

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++   +  D +  N +I GF +AG+  +A+RF    +G  ++P   +++ +I   +  
Sbjct: 253 RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A     E++E GL P    Y  ++ G+ + G + +A  V  EM   G LPD  TY
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L++             + KE  +S A+                       ++L EMK 
Sbjct: 373 NTLLNG------------LCKERRLSDAE-----------------------ELLNEMKE 397

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD   +  +I  + +   +  A+  FD +  + + PD +T+NTLID   + G   +
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL+++M  R  FP   TY+I+I+   E+ + ++    L  M  +G++PN++TY +++ 
Sbjct: 458 ANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIK 517

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y +SG      + L             MR D + P  +  N+LI+ + ++ +  EAF +
Sbjct: 518 GYCRSGNVSKGQQFLPK-----------MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
           L+ M+   ++PD VTY  ++   
Sbjct: 567 LKIMENENVQPDAVTYNMIISGF 589



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 177/371 (47%), Gaps = 11/371 (2%)

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +AGD   AM  +      G+ P   TY +V+  L  +GR  +A  VF  +   G+ P  +
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           ++N L+ G+ + G L++A     EM    V PD  ++S LI  +   G  + A   L+EM
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+  IY+ ++ G+   G      +V  EM + G  PD   YN +++   K   L
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A    + M   G+ PD  T+ TLI  + + G  ++A + F+ + ++   P   TYN +
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ +  Q        L  +M ++ + PN VTY+ L+D + + G+ D+A   L    D+ V
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFL----DEMV 501

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N        G+ P+ +  NS+I  +      ++    L  M+ + + PD++TY TL+   
Sbjct: 502 NK-------GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554

Query: 637 IRVDKFHKVFS 647
           ++  K H+ F+
Sbjct: 555 VKEGKMHEAFN 565



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 199/432 (46%), Gaps = 13/432 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+++    RN   +KA  +   M   G   D  +++++I    R  +++ +L  + Y
Sbjct: 230 VTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL--RFY 287

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE+   ++  D    + +I  F + G+   A  +L   +  GL P    Y  VI     +
Sbjct: 288 KEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRA 347

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  +EA  V +E+   G  P    YN LL G  K   L DAE +++EM+  GV PD  T+
Sbjct: 348 GLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTF 407

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  Y   G  E A      +     +P+   Y+ ++ G   +G+  +  ++  +M S
Sbjct: 408 TTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHS 467

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   Y+++ID+  +   + +A A  D M+++GI P+ +T+N++I  + + G   +
Sbjct: 468 REIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSK 527

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            ++   +M+     P   TYN +I+   ++ +  +   LL  M  + + P+ VTY  ++ 
Sbjct: 528 GQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIIS 587

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            +   G   +A              ++ M   G++P      S+IN         ++F +
Sbjct: 588 GFSVHGNMQEADW-----------VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636

Query: 614 LQYMKENGLKPD 625
              M + GL PD
Sbjct: 637 HDEMLQKGLAPD 648



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 28/287 (9%)

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           ++ R+VL     S+++ N++  + ++  Y    ++     V+ EM+   V PD   +NVM
Sbjct: 145 DAYRLVLS----SNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVM 200

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   +   +  AMA  D M+S+GI+P  +T+N+++    + GR+D+A E+F  M   G 
Sbjct: 201 VDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGV 260

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   ++N++I         E+  R    MR + + P+VV+++ L+ ++ + G  D A E
Sbjct: 261 APDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAE 320

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C  GL  +A+     M   G  P  +  N+L+N   
Sbjct: 321 YLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLC 380

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +++R ++A  +L  MKE G+ PD+ T+TTL+    R     K    +
Sbjct: 381 KERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 7/289 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA--FLLSQRQRLTP---LTYNALISACARNDDLEKAL 213
           C    + Y+ L++ L +  +L +A   L   ++R  P    T+  LI    R+ ++EKAL
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
                +       D + Y+ +I  + R   +  +   +L+ ++   +I  +    + +I 
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA--NELWDDMHSREIFPNHVTYSILID 482

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
              + G    A  FL      G+ P   TY ++I     SG   + +    +++   + P
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN L+ GYVK G + +A  ++  ME   V PD  TY+++I  ++  G  + A  V 
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           K+M     +P+ + Y  ++ G+   G  +++FQ+  EM   G+ PD  F
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 11/182 (6%)

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H    A+  +LS   E +T T N ++  + K  ++   + +  EM++R  FP   T+N+M
Sbjct: 141 HLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVM 200

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           ++        E    L+ +M ++G+ P +VTY +++    ++GR+D A E          
Sbjct: 201 VDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKARE---------- 250

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M   G+ P   + N LI  F       EA    + M+   + PDVV+++ L+   
Sbjct: 251 -VFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLF 309

Query: 637 IR 638
            R
Sbjct: 310 TR 311


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 219/477 (45%), Gaps = 21/477 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +   + EA      ++++  +L  +TYNA+I   A+  ++ KA++L ++M 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+L+I    +++  D +   +L  E++  K+       + +I G   + D
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSH--DMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G+ P    Y  +I A     R   A  + + +  +G+ P    YN 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  +   +++A+ ++ +M   G+ P+ HTY   I+ Y+ +G  + A    K+M  S 
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+ IY+ ++ G+ D G         K M   G+ PD   Y+ +I +  K      AM
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F + L  G+ PD   +N+LI    K G  ++A +L++EM   G  P    YN +IN  
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY 706

Query: 521 G--EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           G  +     +  +L   M ++G+ P+   Y  L+D  G+ G  + A+        ++V +
Sbjct: 707 GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS 766

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                         A NSLI++F +  +  EA  +   M +  L P++VTYT L+ A
Sbjct: 767 LS------------AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 232/495 (46%), Gaps = 37/495 (7%)

Query: 151 SWLQKHNLCYSYELL--------------YSILIHALGRSEKLYEAF-LLSQ--RQRLTP 193
            +L+ H++  + ELL              YS+LI  L  S  L +A  +L Q  R  + P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 194 --LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
               Y  LI A  +    E A+ L+  M  +G   D   Y+ +I  L R  K++ +  + 
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA--KM 542

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  ++    I+ +       I  ++K+G+   A R+       G+ P    Y  +I    
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           + G T+EA + F+ + E GL P  +AY+A++    K G  K+A  V  +  ++GV+PD  
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA--GYRDRGEWQRTFQVLK 429
            Y+ LI  +   G  E A  +  EM  +   PN  +Y+ ++   GY   G     F++  
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM S G+ PD + Y ++ID  GK   L  A++ F     + +   +  +N+LID   K G
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHG 781

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           +   A ELF++M ++   P   TY I+I+  G+ E  E+ ++L  +M  + ++PN +TYT
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841

Query: 550 TLVDIYGQSG-RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           +L+  Y Q G RF            + ++ F+ M   G+    +A   + +A+ ++ +  
Sbjct: 842 SLLLSYNQIGNRF------------KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889

Query: 609 EAFAVLQYMKENGLK 623
           EA  +L      G+K
Sbjct: 890 EALKLLNKSLVEGIK 904



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 162/334 (48%), Gaps = 12/334 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   TY  VI A    G  I+ + V  E+ E   KP    YNA + G  + G + +A 
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            V   M   G+ PD HTY+LL+D +    R + A+++ + M  S   PN F Y+ ++ G+
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G  +   ++  EM + G++ +   YN MI    K   +  AM+ F+ ML  GIEPDT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            T+N LID + K     +A EL  EM+ R   P   TY+++I+ L      +    +L  
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M   G+ PNV  Y TL+  Y Q  R++ AIE L           ++M  +G+ P     N
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL-----------KIMIANGVLPDLFCYN 525

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            LI      ++  EA  +L  M E G+KP+  TY
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 213/458 (46%), Gaps = 20/458 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSL-LQK 251
           TY  +I A  +  D+ K   ++S+M ++   C  +   Y+  I  L +T  +D +L ++K
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKE---CKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  E     +  DG     ++ GF K   + +A          GL+P   TY A+I    
Sbjct: 301 LMME---KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   EA  + +E+   GLK     YNA++ G  K G +  A  + +EM  +G+ PD  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+LLID Y  +     A  +L EM+     P+ F YS +++G     + Q+  +VL +M
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             +GV+P+   Y  +I  + + +    A+     M++ G+ PD   +N LI    +  + 
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKV 537

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A+ L  +M E+G  P   TY   INL  +    +  +R   +M + G++PN V YT L
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTIL 597

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  +           C  G + +A++ F+ M   GL P   A +++I++  ++ +  EA 
Sbjct: 598 IKGH-----------CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            V     + G+ PDV  Y +L+    +     K    Y
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 11/384 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N  I G  + G   +A+    +    GL P   TY  ++       R+ EA+ +FE +  
Sbjct: 280 NAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPS 339

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SGL P    Y AL+ G++K G +++A  +  EM   G+  +  TY+ +I   A AG    
Sbjct: 340 SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAK 399

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  EM ++  +P+++ Y+ ++ GY    +  +  ++L EMK+  + P    Y+V+I 
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLIS 459

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                + L  A    D+M+  G++P+   + TLI  + +  RY+ A EL + M   G  P
Sbjct: 460 GLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLP 519

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YN +I  L   ++ E+ K LL +M  +G+ PN  TY   +++Y +SG         
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI------- 572

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                 A   F+ M + G+ P+N+    LI    +     EA +  + M E GL PD+  
Sbjct: 573 ----QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628

Query: 629 YTTLMKALIRVDKFHKVFSSYLFF 652
           Y+ ++ +L +  K  +    +L F
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKF 652



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 22/508 (4%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF---LLSQRQRLTP--LTYNALISAC 203
           V+S ++K   C      Y+  I  L ++  + EA     L   + L P   TY  L+   
Sbjct: 264 VLSEMEKE--CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGF 321

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +    ++A  +   M   G + +   Y+ +I    +   I+ +L  ++  E+    ++L
Sbjct: 322 CKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL--RIKDEMITRGLKL 379

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +    N +I G AKAG+ +KAM         G+ P T TY  +I     S    +A  + 
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELL 439

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            E+K   L P    Y+ L+ G      L+ A  V+ +M R+GV P+   Y  LI AY   
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            R+E A  +LK M  +   P+ F Y+ ++ G     + +    +L +M   G++P+ H Y
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
              I+ + K   +  A   F  MLS GI P+ + +  LI  H   G    A   F+ M E
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +G  P    Y+ +I+ L +  + ++   +       G++P+V  Y +L+  +        
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF-------- 671

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG--EDQRDAEAFAVLQYMKENG 621
              C EG  ++A   +  M  +G+ P+ +  N+LIN +G  +     EAF +   M   G
Sbjct: 672 ---CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + PD   Y  L+    +     K  S +
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLF 756



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 141/325 (43%), Gaps = 12/325 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA +VF      G  P     N L++  +K   +     V   M  + ++PD +TY+ +I
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            A+   G     ++VL EME    KPN F Y+  + G    G      +V K M   G+ 
Sbjct: 250 KAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG 308

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD H Y +++D F K      A   F+ M S G+ P+  T+  LID   K G  + A  +
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +EM  RG      TYN MI  + +         L   M   G+ P+  TY  L+D Y +
Sbjct: 369 KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLK 428

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           S     A E L             M+   L PS    + LI+         +A  VL  M
Sbjct: 429 SHDMAKACELLAE-----------MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
             NG+KP+V  Y TL+KA ++  ++
Sbjct: 478 IRNGVKPNVFMYGTLIKAYVQESRY 502



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 170/373 (45%), Gaps = 7/373 (1%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +IH+L ++ K  EA   FL   +  + P    YN+LIS   +  D+EKA  L  +M 
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G + + + Y+ +I         + +   KL+ E+    I  DG +   +I G  K G+
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+     AQ   +   +A + ++I +    G+ IEA  +F+++ +  L P    Y  
Sbjct: 749 LEKALSLFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y K   +++AE +  +ME   ++P+  TY+ L+ +Y   G       + K+ME   
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              ++  Y  + + Y   G+     ++L +    G++ +   ++ +I    K   +   +
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  E +   + T NTL+   +K G  D A ++   MQ  G+ P + +    I+  
Sbjct: 928 ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS-T 986

Query: 521 GEQERWEDVKRLL 533
           G  +   D+ ++L
Sbjct: 987 GRDDMKSDISQVL 999



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 174/415 (41%), Gaps = 16/415 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y  LI       +  +AL+    M + G   D   YS +I SL++  K   ++   ++
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM--GVF 649

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT--ALS 311
            +     +  D  L N +I GF K GD  KA +        G++P    Y  +I      
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG   EA  +F+E+   G+ P    Y  L+ G  K G L+ A  +  E ++  V     
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLS 768

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            ++ LID++   G+   AR +  +M      PN   Y+ ++  Y      +   Q+  +M
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           ++  + P+T  Y  ++ ++ +       ++ F  M + GI  D I +  +   + K G+ 
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 888

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A +L  +    G       ++ +I  L ++++   V  LL  M  + L  +  T  TL
Sbjct: 889 LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTL 948

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +  + +SG             D+A     VM+  G  P++L+L   I+   +D +
Sbjct: 949 LLGFYKSGN-----------EDEASKVLGVMQRLGWVPTSLSLTDSISTGRDDMK 992



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 36/271 (13%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           H+YS+L     N+G    A  +L+++ +   KP   I   ++  YR+ G    T      
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKL-LQTRKPPLEILDSLVRCYREFGGSNLTV----- 174

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
                       +++ ID F     L+ A + F   +SEG  P  I  N L+    K   
Sbjct: 175 ------------FDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM 222

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV---KRLLGNMRAQGLLPNVVT 547
                +++  M E    P   TY    N++    +  DV   K +L  M  +   PN+ T
Sbjct: 223 MGLFWKVYGSMVEAKIVPDVYTYT---NVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFT 278

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y   +    Q+G  D+A+E             ++M   GL P       L++ F + +R 
Sbjct: 279 YNAFIGGLCQTGAVDEALE-----------VKKLMMEKGLGPDGHTYTLLVDGFCKQKRS 327

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            EA  + + M  +GL P+  TYT L+   I+
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIK 358


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 234/493 (47%), Gaps = 17/493 (3%)

Query: 161 SYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           S++LL   L +A G+ +   + F  + +   RL+  + N++++  A+  DL   + +  +
Sbjct: 175 SFDLLLRALANA-GQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++ G   D    +++ ++  +   +  +L  +  +E+    +E++    + V+ G+ + 
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHAL--EFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKA 337
           G  + A R L    G G SP   TY  ++    N     EAE V +E+ K   L      
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           + A++ GY +MG ++DA  +++EM  S +  +   Y+++I+ Y   GR   A  +L EM 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P+++ Y+ ++ GY  +G   + F+    M  +G    T  YN ++  F     + 
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +  ML +GI P+ I+ +TL+D  FK G+ ++A  L++E   RG    TTT+N +I
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L + ER  + + L+  M+     P+++TY TL   Y + G  D A   L  L +    
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENL--- 588

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   G  P+    NSLI      ++  +   +L  M   GL P+ V Y  L+    
Sbjct: 589 --------GFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWC 640

Query: 638 RVDKFHKVFSSYL 650
           +    H  ++ YL
Sbjct: 641 KEGDLHTAYNLYL 653



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/560 (21%), Positives = 242/560 (43%), Gaps = 58/560 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAF--LLS 186
           L+K  C+  + ++ A  VV  ++K+      E ++  +I+    +GR E        ++ 
Sbjct: 319 LVKGYCNEKN-MEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVD 377

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
            R ++    YN +I+   +   + +A N++ +M   G   D  +Y+ ++    +   ++ 
Sbjct: 378 SRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNK 437

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   + Y  +  +         N ++ GF   G    A+R   +    G++P   + + +
Sbjct: 438 AF--ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTL 495

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +     SG+T +A  +++E    GL   T  +N ++ G  K+  + +AE +V +M++   
Sbjct: 496 LDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRC 555

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TY  L   Y   G  + A  +L E+E     P    ++ ++ G+    +  +   
Sbjct: 556 PPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVND 615

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L EM + G+ P+T  Y  +I  + K   LH A   +  M+ +G+ P+    ++L+ C +
Sbjct: 616 ILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFY 675

Query: 487 KCGRYDRAEELFEEMQERGYFP--------------------------CTTTYNIMINLL 520
           + G++D A  + + +      P                              +NI+I  L
Sbjct: 676 RKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGL 735

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
            +  R ED K LL +++ +G + +  TY++L+     SG  D A +              
Sbjct: 736 CKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNI 795

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G   +AV+ F+ + T G+ P+ +  N+LI+   +D    EAF + Q 
Sbjct: 796 VTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQR 855

Query: 617 MKENGLKPDVVTYTTLMKAL 636
           M E G+ P V TY+ L+  L
Sbjct: 856 MIEEGIHPTVFTYSILINGL 875



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 205/472 (43%), Gaps = 35/472 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++LLK  CS   SID A  +   + K  +  + E+  S L+    +S K  +A  L + 
Sbjct: 457 YNALLKGFCSL-GSIDDALRLWFLMLKKGIAPN-EISCSTLLDGFFKSGKTEKALNLWKE 514

Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L     T+N +I+   + + + +A  L+ KM+Q     D I Y  +     +   
Sbjct: 515 TLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGD 574

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   ++  E+E        +  N +I G   A    K    L      GLSP T  Y
Sbjct: 575 MDRA--SRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAY 632

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A+I      G    A  ++ E+ E GL P     ++L+  + + G   +A  V+  +  
Sbjct: 633 GALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVG 692

Query: 364 SGVLPD----------------------EHT----YSLLIDAYANAGRWESARIVLKEME 397
           + ++PD                       H+    ++++I      GR E A+ +L +++
Sbjct: 693 TDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLK 752

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 ++F YS ++ G    G     F +   M S G+ P+   YN +I    K   L 
Sbjct: 753 DKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELS 812

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A++ F ++ ++GI P+ IT+NTLID H K G    A +L + M E G  P   TY+I+I
Sbjct: 813 RAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILI 872

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           N L  Q   E+  +LL  M    + PN VTY TL+  Y +    D  I  L+
Sbjct: 873 NGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLD 924



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/546 (21%), Positives = 213/546 (39%), Gaps = 85/546 (15%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSK 218
            +Y+I+I+   +  ++ EA  +         R    +YN+L+    +   + KA    + 
Sbjct: 385 FVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT 444

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL---LQKLYKEIECDKIELDGQLLNDVIVGF 275
           M ++G+    + Y+ +++       ID +L      L K I  ++I       + ++ GF
Sbjct: 445 MLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISC-----STLLDGF 499

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K+G   KA+         GL+  T T+  VI  L    R  EAE + +++K+    P  
Sbjct: 500 FKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDI 559

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             Y  L  GY K+G +  A  +++E+E  G  P    ++ LI  +  A +      +L E
Sbjct: 560 ITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFE 619

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M      PN+  Y  ++AG+   G+    + +  EM   G+ P+    + ++  F +   
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK 679

Query: 456 LHHAMAAFDRMLSEGIEPDT--------------------------ITWNTLIDCHFKCG 489
              A      ++   + PD                           I WN +I    K G
Sbjct: 680 FDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLG 739

Query: 490 RYDRAEELFEEMQERGYF-----------------------------------PCTTTYN 514
           R + A+ L  +++++G+                                    P   TYN
Sbjct: 740 RIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYN 799

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I  L +         L   +  +G+ PN +TY TL+D +           C +G   +
Sbjct: 800 SLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKH-----------CKDGYITE 848

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A    + M  +G+ P+    + LIN         EA  +L  M EN + P+ VTY TL++
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 635 ALIRVD 640
             +R +
Sbjct: 909 GYVRCE 914


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 226/481 (46%), Gaps = 18/481 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +S+L + C  N +I+ A+   S ++   +  S   L SIL   L + +    AF
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL-KCQSWQNAF 353

Query: 184 LLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +      + L    T+N L+S   +   + +A NL  ++   G   + ++Y+ +I    
Sbjct: 354 TMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R + I+++   K+YKE+  +    +      ++ G+ K GD   A       +   + P 
Sbjct: 414 RKDNINAAC--KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 471

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T   +I  L  +GR+ E   +F +    G  P    YN ++ G++K G +  A  V  
Sbjct: 472 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 531

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G+ P   TY+ LID +      + A  +L +M+    K +   Y  ++ G+  R 
Sbjct: 532 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 591

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   ++L E++ +G+ P+   YN MI  F   N +  A+  + +M++EGI  D  T+ 
Sbjct: 592 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 651

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LID   K GR   A ++  EM  +G  P    + ++IN L  + ++E+ +++L +M  +
Sbjct: 652 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 711

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            ++P+V+ Y TL+  + + G   +A      L D+       M   GL P N+  + L+N
Sbjct: 712 NMIPSVLIYNTLIAGHFKEGNLQEAFR----LHDE-------MLDRGLVPDNITYDILVN 760

Query: 600 A 600
            
Sbjct: 761 G 761



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 174/412 (42%), Gaps = 45/412 (10%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           +ELD +  +  +       ++  A+  L   +  G  P   T+ +VITA    G   EA 
Sbjct: 189 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 248

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            + +++   G         +L+KGY   G L+ A  +V+E+  SG++P++ TYS+LID  
Sbjct: 249 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 308

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK----------- 429
              G  E A     EM+    + + +  + IL GY     WQ  F +             
Sbjct: 309 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF 368

Query: 430 -----------------------EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                                  E+ + G+ P+   YN +I    + + ++ A   +  M
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L  G  P+ +T+  L+D +FK G  + A  +F  M++    P  TT  I+I  L +  R 
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            + + L     +QG +P  + Y T++D + + G  +            A N +R M   G
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN-----------LASNVYREMCEVG 537

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + PS +   SLI+ F +      A  +L  MK  GLK D+  Y TL+    +
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 589



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 204/478 (42%), Gaps = 19/478 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YSI +H L        A  L +  R         T+ ++I+AC +  ++ +AL L   M 
Sbjct: 196 YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 255

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +    + +++       + S+L+  L  EI    +  +    + +I G  K G+
Sbjct: 256 NCGKSMNLAVATSLMKGYCMQGNLRSALV--LVNEISESGLVPNKVTYSVLIDGCCKNGN 313

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA  F    +  G+     +  +++           A  +F +  ESGL      +N 
Sbjct: 314 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNT 372

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G + +A  +  E+   G+ P+  +Y+ +I  +       +A  V KEM  + 
Sbjct: 373 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 432

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  ++ ++ GY  +G+ +  F +   MK + + P      ++I    K        
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 492

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F++ +S+G  P  + +NT+ID   K G  + A  ++ EM E G  P T TY  +I+  
Sbjct: 493 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +    +   +LL +M+ +GL  ++  Y TL+D + +      A E L  L         
Sbjct: 553 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL--------- 603

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             R  GL P+    NS+I  F       EA  + + M   G+  D+ TYT+L+  L++
Sbjct: 604 --RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 659



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 7/327 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++IL+    +   +  AF +  R +      T  T   +I    +     +  +L +K  
Sbjct: 440 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 499

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+    + Y+ +I    +   I+  L   +Y+E+    I         +I GF K  +
Sbjct: 500 SQGFVPTCMPYNTIIDGFIKEGNIN--LASNVYREMCEVGITPSTVTYTSLIDGFCKGNN 557

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++ L   +  GL      Y  +I           A  +  EL+ +GL P    YN+
Sbjct: 558 IDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNS 617

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+  M  +++A  +  +M   G+  D  TY+ LID    +GR   A  +  EM    
Sbjct: 618 MITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKG 677

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++ G  ++G+++   ++L++M    + P    YN +I    K   L  A 
Sbjct: 678 ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAF 737

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFK 487
              D ML  G+ PD IT++ L++  FK
Sbjct: 738 RLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/384 (20%), Positives = 161/384 (41%), Gaps = 25/384 (6%)

Query: 277 KAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE------LKES 329
           +  D + A+++   + + +  +  T     ++  L+NS  T  A+ +F++      ++ S
Sbjct: 91  RKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQYLFDQFASGKSVRFS 150

Query: 330 GLKPR----TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
            L  R    TK YN  L   ++ G + +AE    + +  GV  D+  YS+ +        
Sbjct: 151 CLMDRLVECTKLYNFPLD--IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPN 208

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A  +L+EM  +   P    ++ ++      G      ++  +M + G   +      
Sbjct: 209 SGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATS 268

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++  +     L  A+   + +   G+ P+ +T++ LID   K G  ++A E + EM+ +G
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                 + N ++    + + W++   +  +    GL  NV T+ TL+             
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWL---------- 377

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C EG  ++A N +  +   G+ P+ ++ N++I           A  V + M +NG  P+
Sbjct: 378 -CKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 436

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
            VT+T LM    +       FS +
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIF 460


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 218/480 (45%), Gaps = 32/480 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ-KL 252
            TYN L++      +  +   +  +M + G   +  +++++I+S  RT + D ++   ++
Sbjct: 120 FTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEI 179

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAVITALS 311
            K   C K +L   L+  ++    KAG   KA         +G + P  A + A++  L 
Sbjct: 180 MKRKRC-KPDLHTFLI--LVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLL 236

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + R  EA  VF ++++ G  P   AYN ++ G  K G+ ++A  V+  M     +P E 
Sbjct: 237 KAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEV 296

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY +L+++   AG  E A  + + M  S  +PNS IY+ ++ G+   G  +    +  EM
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             +G  PD   + VMID   K      A  +F+ M+  G +P+ +T+ T+I    K GR 
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  + + M   G FP + TY  +++   +  R ++  +LL  +      PN+  Y++L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 552 VDIYGQSGR----FDDAIE---------------------CLEGLSDQAVNAFRVMRTDG 586
           V+     G      DD  E                     C  G  D+A   F+ M ++G
Sbjct: 477 VNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 587 LKPSNLALNSLINAF--GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            KP     N LIN      + R   AFA+L  +++ G  PD VTYT L   L ++ +  +
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 237/553 (42%), Gaps = 72/553 (13%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTPLTYNALI---SACARNDDLEKALNLMSKM 219
           ++ILI +  R+ +  +A   F + +R+R  P  +  LI     C    D EKA  +  +M
Sbjct: 157 FNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD-EKAFEVFHEM 215

Query: 220 RQDGY-HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
              G+   D   ++ ++++L +  ++  +  ++++ ++E      D    N +I G AKA
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEA--REVFGQMEKCGFPPDAIAYNTMIDGLAKA 273

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G A +A++ L         P   TY  ++ +L  +G    AE +F  +  SG +P +  Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            +L+ G+ K G +K+A  +  EM  +G  PD  T++++ID    +G +E A    +EM  
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN   Y+ I+ G    G     F+++K M + G  PD+  Y  ++D F K   L  
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453

Query: 459 AMAAFDRMLSEGIEPDTITWNTLID-------------------------------CHF- 486
           A    D +      P+   +++L++                               C   
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513

Query: 487 ----KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQERWEDVKRLLGNMRAQG 540
               K GR D A  +F+ M   G  P  TTYNI+IN L    + R E    LL ++   G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAV 576
            LP+ VTYT L     + G  D A++                        C +G  D+AV
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAV 633

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + F+ M   G  P   A   +IN   + ++  +A      M   G KP V TYT L++AL
Sbjct: 634 SLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693

Query: 637 IRVDKFHKVFSSY 649
                  + F  +
Sbjct: 694 CHAGNVDEAFHRF 706



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 171/383 (44%), Gaps = 18/383 (4%)

Query: 265 GQLLNDVIVGFAKA----GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           GQ+L   +    ++    G A    R+ G  +  G      TY  ++  L       +  
Sbjct: 82  GQVLGSHVAAVLRSLKVTGTAISFFRWAG--EQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           A+ EE+ ++G+ P T ++N L++ + +     DA      M+R    PD HT+ +L+D  
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199

Query: 381 ANAGRWESARIVLKE-MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
             AG  E A  V  E M +    P+  +++ ++         +   +V  +M+  G  PD
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN MID   K      A+   D ML++   P  +T+  L++   K G  +RAEELF 
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M   G+ P +  Y  +I+   +  R ++   L   M   G  P+V+T+T ++D   +SG
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            F           +QA  +F  M   G KP+ +   ++I    +  R A AF +++ M  
Sbjct: 380 NF-----------EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 620 NGLKPDVVTYTTLMKALIRVDKF 642
           +G  PD VTY  L+    ++ + 
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRL 451



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/585 (22%), Positives = 230/585 (39%), Gaps = 105/585 (17%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           L++ ++  L +++++ EA   F   ++    P  + YN +I   A+    ++AL ++  M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                    + Y +++ SL +   ++ +  ++L++ +       +  +   +I GFAK+G
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERA--EELFRVMAASGFRPNSVIYTSLIHGFAKSG 344

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A          G  P   T+  +I  L  SG   +A   FEE+   G KP    Y 
Sbjct: 345 RMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYT 404

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +++G  K+G + +A  ++  M   G  PD  TY  L+D +   GR + A  +L E++  
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC 464

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTF---------------------------------- 425
            + PN  +YS ++ G  D G  ++T                                   
Sbjct: 465 SSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDE 524

Query: 426 --QVLKEMKSSGVEPDTHFYNVMIDTF--GKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
             ++ + M S G +PD   YN++I+     + N +  A A    +   G  PD +T+  L
Sbjct: 525 ACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPL 584

Query: 482 ---------ID------------------------CHFKC--GRYDRAEELFEEMQERGY 506
                    +D                        C   C  G+ DRA  LF+EM  +G 
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P    Y  +IN L + ++ ED  +    M  +G  P V TYT LV     +G  D+A  
Sbjct: 645 APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704

Query: 567 CLEGL-------------------------SDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             E +                          D A+  F  M + G  P+ +   SL +  
Sbjct: 705 RFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGL 764

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
               +  +A  +LQ M   G  P   T+T ++  L + D+  K+ 
Sbjct: 765 VRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLL 809



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 12/289 (4%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E++G   D  TY+ L++       +     + +EM  +   PN+F ++ ++  +      
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNT 480
                  + MK    +PD H + +++D   K      A   F  M++ G + PD      
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++    K  R   A E+F +M++ G+ P    YN MI+ L +    ++  ++L NM A+ 
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            +P  VTY  LV+   ++G  + A E            FRVM   G +P+++   SLI+ 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEE-----------LFRVMAASGFRPNSVIYTSLIHG 339

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           F +  R  EA ++   M E G +PDV+T+T ++  L +   F +   S+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 236/542 (43%), Gaps = 49/542 (9%)

Query: 150 VSWLQKHNLCYSYELLYSILIHALG--RSEKLYEAFLLSQRQRLTP--LTYNALISACAR 205
           +  L + N C+  +  Y+ LI+ L   ++E+  E    + ++  TP  +T+  LI+    
Sbjct: 230 IKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCM 289

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
            +  + AL + +KM       D   +  +I SL + +++  +  ++L  EI  + +  + 
Sbjct: 290 AEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA--KELLNEISANGLVPNV 347

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
                +I G+ K+G    A+  L M +  G  P   TY +++  L    +  +A A+  +
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +++ G+ P    Y  LL+G        +A  +   ME++G+ PDEH Y++L DA   AGR
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 467

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A   +    V+  K     Y+ ++ G+   G       +++ M   G  PD++ Y+V
Sbjct: 468 AEEAYSFIVRKGVALTK---VYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 524

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++    K   L+ A+   D+M   GI+     +  LID   + G++D A+ ++ EM   G
Sbjct: 525 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 584

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P  TTY + IN   ++ R ED + L+  M  +G+ P+VVTY  L+D  G  G  D A 
Sbjct: 585 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644

Query: 566 ECLEGLS----------------------------------------DQAVNAFRVMRTD 585
             L+ +                                         D        M   
Sbjct: 645 STLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKH 704

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL P+    +SLI  F +  R  EA  +L +M   GL P+   YT L+K       F K 
Sbjct: 705 GLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKA 764

Query: 646 FS 647
            S
Sbjct: 765 LS 766



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 207/434 (47%), Gaps = 20/434 (4%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+  ++SL R +   +  + ++Y ++  D +  D    N +I  + K GD + A R+  +
Sbjct: 36  YNFALRSLARFDM--TEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 93

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P+T T  A++     +G   +A  +F  +   G +    +Y  L++G      
Sbjct: 94  LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 153

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++ A  +   M+R G  P+   ++ LI     +GR   AR++   M  +   P+   Y+ 
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G      ++ + M+ +G  PD   YN +I           A    +  + EG
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEG 272

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             P  +T+  LI+ +    ++D A  +  +M           +  +IN L +++R ++ K
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 332

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  + A GL+PNV+TYT+++D Y +SG+ D A+E L           ++M  DG +P+
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-----------KMMERDGCQPN 381

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
               NSL+    +D++  +A A+L  M+++G+ P+V+TYTTL++       F        
Sbjct: 382 AWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA----- 436

Query: 651 FFNIYKMLSYSGEK 664
            F +++M+  +G K
Sbjct: 437 -FRLFEMMEQNGLK 449



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 236/525 (44%), Gaps = 30/525 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL---SQ 187
           L++ LC +     +  A+V +L  K + C      ++ LI  L +S ++ +A LL     
Sbjct: 144 LIQGLCDAKC---VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +  + P  +TYNA+I   ++   +  AL +   M ++G H D   Y+ +I  L      +
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEE 260

Query: 246 SS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +  LL    KE     +     L+N    G+  A     A+R                + 
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLIN----GYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I +L    R  EA+ +  E+  +GL P    Y +++ GY K G +  A  V+  MER 
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  P+  TY+ L+       +   A  +L +M+     PN   Y+ +L G  D  ++   
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F++ + M+ +G++PD H Y V+ D   K      A  A+  ++ +G+    + + TLID 
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDG 493

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K G  D A  L E M + G  P + TY+++++ L +Q+R  +   +L  M  +G+   
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 545 VVTYTTLVDIYGQSGRFDDAIECL-EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +  YT L+D            E L EG  D A   +  M + G KPS       IN++ +
Sbjct: 554 IFAYTILID------------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCK 601

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           + R  +A  ++  M+  G+ PDVVTY  L+     +    + FS+
Sbjct: 602 EGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 646



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 227/494 (45%), Gaps = 58/494 (11%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S R  L+P  YN  + + AR D  E    + S++ QDG   D + Y+ +I+S  +   + 
Sbjct: 26  SARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLT 85

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA------MRFLG---------- 289
           ++   + ++ +    +E +    N +++G+ + G+  KA      M  +G          
Sbjct: 86  TA--HRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI 143

Query: 290 MAQGV-------------------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           + QG+                   G SP    +  +I+ L  SGR  +A  +F+ + ++G
Sbjct: 144 LIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNG 203

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    YNA++ GY K+G + DA  +   ME++G  PD+ TY+ LI    +  + E A 
Sbjct: 204 VVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAE 262

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L         P    ++ ++ GY    ++    ++  +M SS  + D   +  +I++ 
Sbjct: 263 ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSL 322

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K + L  A    + + + G+ P+ IT+ ++ID + K G+ D A E+ + M+  G  P  
Sbjct: 323 IKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNA 382

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN ++  L + ++      LL  M+  G++PNV+TYTTL+   GQ    D        
Sbjct: 383 WTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ--GQCDEHD-------- 432

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             D A   F +M  +GLKP   A   L +A  +  R  EA++   ++   G+    V YT
Sbjct: 433 -FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS---FIVRKGVALTKVYYT 488

Query: 631 TLMKALIRVDKFHK 644
           TL      +D F K
Sbjct: 489 TL------IDGFSK 496



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 203/447 (45%), Gaps = 17/447 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +Y  LI        + KAL L   M++DG   +   ++ +I  L ++ ++  + L  L+ 
Sbjct: 140 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL--LFD 197

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +  + +       N +IVG++K G  + A++   + +  G  P   TY  +I  L +  
Sbjct: 198 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ- 256

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +T EAE +     + G  P    +  L+ GY       DA  + ++M  S    D   + 
Sbjct: 257 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI++     R + A+ +L E+  +   PN   Y+ I+ GY   G+     +VLK M+  
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G +P+   YN ++    K   LH AMA   +M  +GI P+ IT+ TL+        +D A
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LFE M++ G  P    Y ++ + L +  R E+    +     +G+    V YTTL+D 
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 493

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + ++G  D A   +E + D+           G  P +   + L++A  + +R  EA  +L
Sbjct: 494 FSKAGNTDFAATLIERMIDE-----------GCTPDSYTYSVLLHALCKQKRLNEALPIL 542

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
             M   G+K  +  YT L+  ++R  K
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGK 569



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 181/394 (45%), Gaps = 28/394 (7%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           + DA +A+R  G A+ + LSPK   +A  + +L+    T     V+ +L + GL P T  
Sbjct: 14  SADAIQAIRRTGSAR-LALSPKCYNFA--LRSLARFDMTEYMGRVYSQLVQDGLLPDTVT 70

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++K Y K G L  A      +   G+ P+  T + L+  Y   G    A  +   M 
Sbjct: 71  YNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMP 130

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +   + N + Y+ ++ G  D    ++   +   MK  G  P+   +  +I    K   + 
Sbjct: 131 LMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVG 190

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   FD M   G+ P  +T+N +I  + K GR + A ++ E M++ G  P   TYN +I
Sbjct: 191 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI---------ECL 568
             L +Q + E+ + LL N   +G  P VVT+T L++ Y  + +FDDA+         +C 
Sbjct: 251 YGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCK 309

Query: 569 EGLS---------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
             L                 +A      +  +GL P+ +   S+I+ + +  +   A  V
Sbjct: 310 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEV 369

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           L+ M+ +G +P+  TY +LM  L++  K HK  +
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMA 403



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 209/496 (42%), Gaps = 63/496 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + S++   C S   +D+A  V+  +++   C      Y+ L++ L + +KL++A  LL++
Sbjct: 350 YTSIIDGYCKS-GKVDIALEVLKMMERDG-CQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 188 RQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            Q+  + P  +TY  L+       D + A  L   M Q+G   D   Y+++  +L +  +
Sbjct: 408 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 467

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +     Y  I    + L       +I GF+KAG+   A   +      G +P + TY
Sbjct: 468 AEEA-----YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTY 522

Query: 304 AAVITALSNSGRTIEA-----------------------------------EAVFEELKE 328
           + ++ AL    R  EA                                   + ++ E+  
Sbjct: 523 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 582

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG KP    Y   +  Y K G L+DAE ++ +MER GV PD  TY++LID   + G  + 
Sbjct: 583 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 642

Query: 389 ARIVLKEMEVSHAKPNSFIYSRIL----------------AGYRDRGEWQRTFQVLKEMK 432
           A   LK M  +  +PN + Y  +L                +G  +  E   T+Q+L+ M 
Sbjct: 643 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 702

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+ P    Y+ +I  F K   L  A    D M  +G+ P+   +  LI C      ++
Sbjct: 703 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 762

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A      M E G+ P   +Y +++  L  +  +E VK L  ++   G   + V +  L 
Sbjct: 763 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 822

Query: 553 DIYGQSGRFDDAIECL 568
           D   ++G  D   + L
Sbjct: 823 DGLLKAGYVDICFQML 838



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 179/452 (39%), Gaps = 67/452 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           + +LL+  C  +   D A+ +   ++++ L    E  Y++L  AL   GR+E+ Y +F++
Sbjct: 420 YTTLLQGQCDEHD-FDNAFRLFEMMEQNGL-KPDEHAYAVLTDALCKAGRAEEAY-SFIV 476

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +   LT + Y  LI   ++  + + A  L+ +M  +G   D   YS+++ +L +  +++
Sbjct: 477 RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN 536

Query: 246 SSLL---QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +L    Q   + I+C  I     L+++++    + G    A R        G  P   T
Sbjct: 537 EALPILDQMSLRGIKC-TIFAYTILIDEML----REGKHDHAKRMYNEMTSSGHKPSATT 591

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF------ 356
           Y   I +    GR  +AE +  +++  G+ P    YN L+ G   MGY+ D  F      
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYI-DRAFSTLKRM 650

Query: 357 ----------------------------------------------VVSEMERSGVLPDE 370
                                                         ++  M + G+ P  
Sbjct: 651 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 710

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TYS LI  +  AGR E A ++L  M      PN  IY+ ++    D   +++    +  
Sbjct: 711 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 770

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G +P    Y +++             + F  +L  G   D + W  L D   K G 
Sbjct: 771 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 830

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D   ++   M++R     + TY ++ N + E
Sbjct: 831 VDICFQMLSIMEKRYCCISSQTYALVTNKMHE 862


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 269/637 (42%), Gaps = 74/637 (11%)

Query: 69  EDDDDVLSLQKQRYDFTPLLN-----FLSENSNSESASALASSPSSLNRVEFKLAESYRA 123
           ED  D+L   ++R   TP+L      FL+  + + S++A  S P+ L    F  A S   
Sbjct: 50  EDAHDLLDELQRRG--TPVLGRDLNGFLAALARAPSSAACGSGPA-LAVALFNRAASRAQ 106

Query: 124 VP---APLWHS--LLKNLCSSNSSIDLAYAVVSWLQKHNL-------------------- 158
            P   +P  H+  +L + C+     +LA A    L +  L                    
Sbjct: 107 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRT 166

Query: 159 ---------------CYSYELLYSILIHAL------GRSEKLYEAFLLSQRQRLTP--LT 195
                          C      YSIL+ +L      G+++ L    +       +P  + 
Sbjct: 167 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR-MMAEGGAVCSPDVVA 225

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  +I    +  D+ KA +L  +M Q G   D + YS V+ +L +   +  +  +   ++
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKA--EAFLRQ 283

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D    N++I G++  G   +A+R     +   + P   T   ++ +L   G+
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  VF+ +   G  P   +Y  +L GY   G L D   +   M   G+ PD +T+S+
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI AYAN G  + A I+  EM     KP+   Y+ ++A     G+     +   +M   G
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V PD + Y+ +I  F  +  L  A      +++ G+  D + ++++I+   K GR   A+
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +F+     G  P    Y+++++      + E   R+   M + G+ PNVV Y TLV+ Y
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + GR D      EGLS      FR M   G+KPS +  N +I+      R   A     
Sbjct: 584 CKIGRID------EGLS-----LFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFH 632

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            M E+G+  +  TY  +++   +    ++ F   +F 
Sbjct: 633 EMTESGIAINKCTYNIVLRGFFK----NRCFDEAIFL 665



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 219/477 (45%), Gaps = 36/477 (7%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++HAL ++  +   EAFL     + + P   TYN LI   +     ++A+ +  +MR
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ---------LLNDV 271
           +     D +  ++++ SL +  KI  +  + ++     D + + GQ         +LN  
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEA--RDVF-----DTMAMKGQNPDVFSYKIMLN-- 371

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
             G+A  G          +  G G++P   T++ +I A +N G   +A  +F E+++ G+
Sbjct: 372 --GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGV 429

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           KP    Y  ++    ++G + DA    ++M   GV PD++ Y  LI  +   G    A+ 
Sbjct: 430 KPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 489

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           ++ E+  +  + +   +S I+      G       +     + G  PD   Y++++D + 
Sbjct: 490 LILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYC 549

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
               +  A+  FD M+S GIEP+ + + TL++ + K GR D    LF EM ++G  P T 
Sbjct: 550 LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 609

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
            YNI+I+ L    R    K     M   G+  N  TY  ++  + ++  FD+AI      
Sbjct: 610 LYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAI------ 663

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                  F+ +R   +K   + LN++I    + +R  EA  +   +  +GL P VVT
Sbjct: 664 -----FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 197/420 (46%), Gaps = 14/420 (3%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           +NL Y Y         + G+ ++    F   +R  + P  +T N L+ +  +   +++A 
Sbjct: 297 NNLIYGYS--------STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           ++   M   G + D  +Y +++    T+   +D   +  L+  +  D I  D    + +I
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVD---MTDLFDLMLGDGIAPDIYTFSVLI 405

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             +A  G   KAM      +  G+ P   TY  VI AL   G+  +A   F ++ + G+ 
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   AY+ L++G+   G L  A+ ++ E+  +G+  D   +S +I+     GR   A+ +
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI 525

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
                     P++ +YS ++ GY   G+ ++  +V   M S+G+EP+   Y  +++ + K
Sbjct: 526 FDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +   ++ F  ML +GI+P TI +N +ID  F  GR   A+  F EM E G      T
Sbjct: 586 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCT 645

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YNI++    +   +++   L   +RA  +  +++T  T++    Q+ R ++A +    +S
Sbjct: 646 YNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 705


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/564 (23%), Positives = 269/564 (47%), Gaps = 35/564 (6%)

Query: 87  LLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAP-LWHSLLKNLCSSNSSIDL 145
           LL  L E  + ++A  + ++  +L R +F         P P ++  +++ L  +  ++DL
Sbjct: 44  LLTALREQPDPDAALRMLNA--ALARDDF--------APGPEVYEEIIRKL-GAVGALDL 92

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRL-----TPLTYN 197
              +V+ +++        +++S L    G  ++L++     +L+Q Q L       + YN
Sbjct: 93  MKVLVAEMRREGHQVKLGVVHSFLDSYEG--QQLFDDAVDLILNQLQPLFGIQADTVVYN 150

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            L++       ++   ++ S+M   G   D + ++ ++++L R +++ ++++  + +E+ 
Sbjct: 151 HLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVI--MLEEMS 208

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      ++ GF + G    A+R       +G S    T   +I      GR  
Sbjct: 209 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVE 268

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A    ++    G +P    YN  + G  +  ++  A  V+  M + G  PD  TY++++
Sbjct: 269 DALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVV 328

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ E A+ +L +M      P+   ++ ++A        +    + +++   GV 
Sbjct: 329 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD + +N++I+   K    H A+  F+ M + G  PD +T+NTLID     G+  +A +L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            ++M+  G    T TYN +I+ L ++ R E+ + +   M  QG+  N +T+ TL+D   +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 508

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             + DDA E    L +Q       M ++GL+P+N+  NS++  + +     +A  +L+ M
Sbjct: 509 DKKIDDAFE----LINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
             NG + DVVTY TL+  L +  +
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGR 581



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 229/505 (45%), Gaps = 33/505 (6%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSK 218
           Y  L ++L+   G   KL E+       R + P  +T+N L+ A  R   +  A+ ++ +
Sbjct: 149 YNHLLNVLVE--GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEE 206

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           M   G   D   ++ ++Q       I+++L ++    E+ C   ++    +N +I G+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT---VNVLINGYCK 263

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A+ ++      G  P   TY   +  L  +     A  V + + + G  P    
Sbjct: 264 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 323

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++    K G L++A+ ++++M   G LPD  T++ LI A     R E A  + +++ 
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+ + ++ ++      G+     ++ +EMK+SG  PD   YN +ID       L 
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M S G    TIT+NT+ID   K  R + AEE+F++M  +G      T+N +I
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           + L + ++ +D   L+  M ++GL PN +TY +++  Y + G    A + LE        
Sbjct: 504 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 563

Query: 570 ----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                           G +  A+   R MR  G++P+  A N ++ +        +A ++
Sbjct: 564 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 623

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M E G  PD +TY  + + L R
Sbjct: 624 FREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++  T  YN LL   V+   +K  E V SEM   G+ PD  T++ L+ A   A +  +A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            I+L+EM      P+   ++ ++ G+ + G  +   +V   M   G        NV+I+ 
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A+    + +++G EPD IT+NT ++   +      A ++ + M + G+ P 
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI++N L +  + E+ K +L  M  +G LP++ T+ TL+           A  C  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI-----------AALCTG 369

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              ++A++  R +   G+ P     N LINA  +      A  + + MK +G  PD VTY
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 630 TTLMKALIRVDKFHKVF 646
            TL+  L  + K  K  
Sbjct: 430 NTLIDNLCSLGKLGKAL 446



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
           K++ C   E+ Y+ LI  L    KL +A  L +    T      +TYN +I    +   +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L +  KID +   +L  ++  + ++ +    N
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF--ELINQMISEGLQPNNITYN 535

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  V   ++  
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G++P  KAYN +L+   +   ++DA  +  EM   G  PD  TY ++       G
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 650


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 209/434 (48%), Gaps = 15/434 (3%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           +TP   T + LI+       +  A ++ + + + G+H + I  + +I+ L    +I  +L
Sbjct: 88  ITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKAL 147

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
               + ++     +LD      +I G  K G+     R L   +G  + P    Y  +I 
Sbjct: 148 Y--FHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIN 205

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           +L  +    +A  V+ E+   G+ P    Y  L+ G+  MG+LK+A  +++EM+   + P
Sbjct: 206 SLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINP 265

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  T+++LIDA +  G+ + A+I+L  M  +  KP+ F Y+ ++ GY    E +    V 
Sbjct: 266 NVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVF 325

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M   GV PD   Y  MI+   K   +  AM+ F+ M  + + PD +T+N+LID   K 
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              +RA  L + M+E+G  P   +Y I+++ L +  R ED K +   + A+G   NV  Y
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L++   ++G FD+A++    + D+           G  P  +  + +I A  E   + 
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDK-----------GCMPDAVTFDIIIRALFEKDEND 494

Query: 609 EAFAVLQYMKENGL 622
           +A  +L+ M   GL
Sbjct: 495 KAEKILREMIARGL 508



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 202/433 (46%), Gaps = 8/433 (1%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           FK  E     P     S+L N     + I LA++V + + K    +   +  + LI  L 
Sbjct: 80  FKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGF-HPNAITLNTLIKGLC 138

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
              ++ +A      L++Q  +L  ++Y  LI+   +  + +    L+ K+       D +
Sbjct: 139 FRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 198

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+ +I SL +   +  +    +Y E+    I  D      +I GF   G   +A   L 
Sbjct: 199 MYNTIINSLCKNKLLGDAC--DVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +   ++P   T+  +I ALS  G+  EA+ +   + ++ +KP    YN+L+ GY  + 
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +K A++V   M + GV PD   Y+ +I+        + A  + +EM+  +  P+   Y+
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G       +R   + K MK  G++PD + Y +++D   K   L  A   F R+L++
Sbjct: 377 SLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK 436

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G   +   +  LI+   K G +D A +L  +M+++G  P   T++I+I  L E++  +  
Sbjct: 437 GYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKA 496

Query: 530 KRLLGNMRAQGLL 542
           +++L  M A+GLL
Sbjct: 497 EKILREMIARGLL 509



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 191/467 (40%), Gaps = 55/467 (11%)

Query: 212 ALNLMSKMRQD--GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           + NLM  MR     +H + I  SLV       NK   +++  L+K+ E + I  D   L+
Sbjct: 44  SFNLMLLMRPPPPTFHFNNILSSLV------NNKHYPTVIS-LFKQFEPNGITPDLCTLS 96

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I  F      + A          G  P   T   +I  L   G   +A    ++L   
Sbjct: 97  ILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQ 156

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +    +Y  L+ G  K G  K    ++ ++E   V PD   Y+ +I++         A
Sbjct: 157 GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDA 216

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V  EM V    P+   Y+ ++ G+   G  +  F +L EMK   + P+   +N++ID 
Sbjct: 217 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDA 276

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-----KCGRY------------- 491
             K   +  A      M+   I+PD  T+N+LID +F     K  +Y             
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336

Query: 492 -----------------DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
                            D A  LFEEM+ +   P   TYN +I+ L +    E    L  
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M+ QG+ P+V +YT L+D   +SGR +DA E            F+ +   G   +  A 
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKE-----------IFQRLLAKGYHLNVHAY 445

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             LIN   +     EA  +   M++ G  PD VT+  +++AL   D+
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 16/212 (7%)

Query: 438 PDTHFYNVMIDTFGKYNCLHH--AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           P  HF N++       N  H+   ++ F +    GI PD  T + LI+C         A 
Sbjct: 56  PTFHFNNILSSLV---NNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAF 112

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +F  + +RG+ P   T N +I  L  +   +        + AQG   + V+Y TL++  
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++G        L  L   +V           KP  +  N++IN+  +++   +A  V  
Sbjct: 173 CKTGETKAVARLLRKLEGHSV-----------KPDVVMYNTIINSLCKNKLLGDACDVYS 221

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            M   G+ PDVVTYTTL+     +    + FS
Sbjct: 222 EMIVKGISPDVVTYTTLIHGFCIMGHLKEAFS 253


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 225/471 (47%), Gaps = 18/471 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  L RS K  +A      ++ +      +TYN +I    +  DLE    L  +M 
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           QDG   + + Y++++  L R  ++D +  + L  E+    +  DG   + +  G  + GD
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDET--RALMDEMTSYSMLPDGFTYSILFDGLTRTGD 315

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   +   G +   G+     T + ++  L   G+  +AE V E L  +GL P T  YN 
Sbjct: 316 SRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNT 375

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY ++  L+ A  +  +M+   + PD  TY+ LI+          A  ++ EME S 
Sbjct: 376 LINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSG 435

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++  Y   G+ ++ F VL +M+  G++ +   +  ++  F K   +  A+
Sbjct: 436 VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAV 495

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A  D M+ + + P+   +N++ID + + G  ++A  L E+M+  G      TYN+++  L
Sbjct: 496 AILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGL 555

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  + ++ + L+ N+  QGL P+VV+Y T++              C +G +D+A+   +
Sbjct: 556 CKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISAC-----------CNKGDTDRALELLQ 604

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            M    ++P+    + L++A G   R  +   + Q+M    ++P    Y T
Sbjct: 605 EMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 229/514 (44%), Gaps = 32/514 (6%)

Query: 164 LLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM-R 220
           LL S+L  ++GR   +  AF  L++   R     +N  + AC    DL++AL ++ +M R
Sbjct: 129 LLESLL--SVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186

Query: 221 QDGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +G    D  +Y++VI  L R+ K   +L  K++ E+    +  +    N +I G  K G
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDAL--KVFDEMVDRGVAPNQITYNTMIDGHVKGG 244

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D     R        G  P   TY  +++ L  +GR  E  A+ +E+    + P    Y+
Sbjct: 245 DLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYS 304

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L  G  + G  +    +  E  + GV+   +T S+L++     G+   A  VL+ +  +
Sbjct: 305 ILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 364

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P + IY+ ++ GY    + Q  F + ++MKS  + PD   YN +I+   K   +  A
Sbjct: 365 GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEA 424

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M   G++P   T+NTLID + + G+ ++   +  +MQ++G      ++  ++  
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKA 484

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA- 578
             +  +  +   +L +M  + ++PN   Y +++D Y +SG  + A   +E +    V+A 
Sbjct: 485 FCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSAS 544

Query: 579 -----------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                                     +   GL+P  ++ N++I+A         A  +LQ
Sbjct: 545 IFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQ 604

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M +  ++P + TY  L+ AL    + H +   Y
Sbjct: 605 EMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLY 638



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 46/199 (23%)

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYNIMINL 519
           AAF  +++ G  PDT  WN  +      G  D A  +   M +  G  P           
Sbjct: 144 AAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPP----------- 192

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                                  P+  +Y  ++    +SG+  DA++  + + D+     
Sbjct: 193 -----------------------PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR----- 224

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                 G+ P+ +  N++I+   +       F +   M ++G KP+VVTY  L+  L R 
Sbjct: 225 ------GVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRA 278

Query: 640 DKFHKVFSSYLFFNIYKML 658
            +  +  +       Y ML
Sbjct: 279 GRMDETRALMDEMTSYSML 297


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 36/468 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           + N LI+   R + ++ A++++ KM + G H     ++ +I  L    KI  ++  +L+ 
Sbjct: 125 SLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV--ELFN 182

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+     E +    N +I G  K G+ S A+      +  G  P   TY  +I +L    
Sbjct: 183 EMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDR 242

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A     E+ + G+ P    YN ++ G+  +G L +A  +  EM    V+PD  T +
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLT 302

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEM 431
           +L+D     G    AR+V + M     +PN   Y+ ++ GY   R   E ++ F++   M
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI---M 359

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCG 489
              G  P  H YN++I+ F K   +  A +    M  + + PDT+T++TL+   C F  G
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF--G 417

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A  +F+EM   G  P   TY+I+++   +    ++  +LL +M+ + L PN+V +T
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477

Query: 550 TLVDIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTD 585
            L++    +G+ + A E                          EGLSD+A + FR M  D
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           G  P++ + N +I  F ++Q  + A  ++  M       ++ T+  L+
Sbjct: 538 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 196/402 (48%), Gaps = 23/402 (5%)

Query: 258 CDKIELDGQL-----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           C++++L G       LN +I    +      A+  LG    +G+ P  +T+ A+I  L N
Sbjct: 111 CNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCN 170

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G+  EA  +F E+   G +P   +YN ++ G  K G    A  V  +ME++G  PD  T
Sbjct: 171 EGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVT 230

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ +ID+         A   L EM      PN F Y+ ++ G+   G+     ++ KEM 
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V PDT    +++D   K   +  A   F+ M  +G+EP+  T+N L+D +      +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A+++FE M  +G  P   +YNI+IN   +  R ++ K LL  M  + L P+ VTY+TL+
Sbjct: 351 EAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLM 410

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               Q GR             +A+N F+ M + GL P+ +  + L++ F +     EA  
Sbjct: 411 QGLCQFGR-----------PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFS 647
           +L+ M+E  L+P++V +T L++ +    K       F K+F+
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 213/452 (47%), Gaps = 9/452 (1%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           L+  LC  N  +D A +++  + K  + +     ++ LI+ L    K+ EA      ++ 
Sbjct: 129 LINCLCRLNH-VDFAVSILGKMFKLGI-HPTASTFNALINGLCNEGKIKEAVELFNEMVR 186

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +      ++YN +I+   +  +   A+++  KM Q+G   D + Y+ +I SL +   ++ 
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++  +   E+    I  +    N ++ GF   G  ++A R      G  + P T T   +
Sbjct: 247 AM--EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L   G   EA  VFE + E G++P    YNAL+ GY     + +A+ V   M R G 
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P  H+Y++LI+ +  + R + A+ +L EM      P++  YS ++ G    G  +    
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + KEM S G+ P+   Y++++D F K+  L  A+     M  + +EP+ +    LI+  F
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+ + A+ELF ++   G  P   TY +MI  L ++   ++   L   M   G LPN  
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSC 544

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +Y  ++  + Q+     AI  ++ +  +  +A
Sbjct: 545 SYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSA 576



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 18/365 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P  A +   + + +   +     ++  ++   G+     + N L+    ++ ++  A  +
Sbjct: 86  PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + +M + G+ P   T++ LI+   N G+ + A  +  EM     +PN   Y+ I+ G   
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G       V K+M+ +G +PD   YN +ID+  K   ++ AM     ML  GI P+  T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N ++      G+ + A  LF+EM  R   P T T  I+++ L ++    + + +   M 
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ PN+ TY  L+D Y           CL+ L ++A   F +M   G  P   + N L
Sbjct: 326 EKGVEPNISTYNALMDGY-----------CLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK- 656
           IN F + +R  EA ++L  M    L PD VTY+TLM+ L +  +  +        NI+K 
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA------LNIFKE 428

Query: 657 MLSYS 661
           M SY 
Sbjct: 429 MCSYG 433


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 225/502 (44%), Gaps = 31/502 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           +S L+ A+ + +K        ++  +  +     TYN +I+   R   L  AL ++ KM 
Sbjct: 68  FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY    +  + ++      N+I  ++   L  ++     + D      ++ G  +   
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAV--ALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           AS+A+  +      G  P   TY AVI  L   G    A  +  ++++  ++     Y+ 
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K  ++ DA  + +EM+  G+ PD  TYS LI    N GRW  A  +L +M    
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   ++ ++  +   G+     ++  EM    ++P+   YN +I+ F  ++ L  A 
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+S+   PD +T+NTLI+   K  +     ELF +M  RG    T TY  +I+  
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------- 565
            +    ++ + +   M + G+ PN++TY TL+D   ++G+ + A+               
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485

Query: 566 ---------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G  +   + F  +   G+KP  +A N++I+ F +     EA+ +   
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545

Query: 617 MKENGLKPDVVTYTTLMKALIR 638
           MKE+G  PD  TY TL++A +R
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLR 567



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 217/448 (48%), Gaps = 17/448 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           ++ L+SA A+    +  ++   KM   G   +   Y+++I  L R +++  +L  L K+ 
Sbjct: 68  FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K      I     LLN    GF      S+A+  +     +G  P T T+  ++  L   
Sbjct: 128 KLGYGPSIVTLNSLLN----GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA A+ E +   G +P    Y A++ G  K G    A  ++++ME+  +  D   Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +ID+       + A  +  EM+    +P+ F YS +++   + G W    ++L +M  
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   +N +ID F K   L  A   FD M+   I+P+ +T+N+LI+      R D 
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++F  M  +   P   TYN +IN   + ++  D   L  +M  +GL+ N VTYTTL  
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL-- 421

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           I+G    F  A +C     D A   F+ M +DG+ P+ +  N+L++   ++ +  +A  V
Sbjct: 422 IHG----FFQASDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +Y++++ ++PD+ TY  + + + +  K
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGK 500



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 244/527 (46%), Gaps = 60/527 (11%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +SLL   C  N  I  A A+V   Q   + Y  + + ++ L+H L +  K  EA  L +R
Sbjct: 139 NSLLNGFCHGNR-ISEAVALVD--QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195

Query: 189 QRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             +       +TY A+I+   +  + + ALNL++KM +     D + YS VI SL +   
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +L   L+ E++   I  D    + +I      G  S A R L       ++P   T+
Sbjct: 256 VDDAL--NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I A +  G+ IEAE +F+E+ +  + P    YN+L+ G+     L +A+ + + M  
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
              LPD  TY+ LI+ +  A +      V+  ME+                +RD      
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKK------VVDGMEL----------------FRD------ 405

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                  M   G+  +T  Y  +I  F + +   +A   F +M+S+G+ P+ +T+NTL+D
Sbjct: 406 -------MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+ ++A  +FE +Q+    P   TYNIM   + +  + ED   L  ++  +G+ P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +V+ Y T++  +           C +GL ++A   F  M+ DG  P +   N+LI A   
Sbjct: 519 DVIAYNTMISGF-----------CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK-FHKVFS 647
           D   A +  +++ M+      D  TY  +   L   R+DK F +V S
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 211/471 (44%), Gaps = 17/471 (3%)

Query: 191 LTPLTYNALISACARND----DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
            + L+Y+      +RN      L++A++L  +M +       + +S ++ ++ +  K D 
Sbjct: 24  FSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD- 82

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            L+    +++E   +  +    N +I    +    S A+  LG    +G  P   T  ++
Sbjct: 83  -LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL 141

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +    +  R  EA A+ +++ E G +P T  +  L+ G  +     +A  +V  M   G 
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TY  +I+     G  + A  +L +ME    + +  IYS ++              
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  EM + G+ PD   Y+ +I     Y     A      ML   I P+ +T+N+LID   
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+   AE+LF+EM +R   P   TYN +IN     +R ++ +++   M ++  LP+VV
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY TL++ + ++ +  D +E            FR M   GL  + +   +LI+ F +   
Sbjct: 382 TYNTLINGFCKAKKVVDGME-----------LFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
              A  V + M  +G+ P+++TY TL+  L +  K  K    + +    KM
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 183/397 (46%), Gaps = 9/397 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + +++  LC      DLA  +++ ++K  +  +  ++YS +I +L +   + +A  L   
Sbjct: 208 YGAVINGLCKRGEP-DLALNLLNKMEKGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTE 265

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             ++  R    TY++LIS          A  L+S M +   + + + ++ +I +  +  K
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  +KL+ E+    I+ +    N +I GF       +A +   +       P   TY
Sbjct: 326 LIEA--EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I     + + ++   +F ++   GL   T  Y  L+ G+ +     +A+ V  +M  
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P+  TY+ L+D     G+ E A +V + ++ S  +P+ + Y+ +  G    G+ + 
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+PD   YN MI  F K      A   F +M  +G  PD+ T+NTLI 
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            H + G    + EL +EM+   +    +TY ++ ++L
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 216/491 (43%), Gaps = 48/491 (9%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L   +YN LI    ++    +AL +  +M  +G       YS ++ +L +  K DS ++ 
Sbjct: 190 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK--KRDSEMVM 247

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L KE+E   +  +       I    +AG   +A          G  P   TY  +I AL
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            N+G+   A+ +F ++K +G KP    Y  LL  +   G L   +   S+ME  G +PD 
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T+++L+D    A  ++ A      M      PN   Y+ ++ G    G  +   ++L  
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI------------------- 471
           M+S GV+P  + YN+ ID FGK      A+  F++M ++GI                   
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 472 ----------------EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
                            PD++T+N ++ C+ K G+ D A  L  EM   G  P     N 
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L +  R ++  ++   M+   L P VVTY TL+   G+ GR   AIE  E + ++ 
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            +           P+ ++ N+L++ F ++     A  +   M     KPDV+TY T++  
Sbjct: 608 CS-----------PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 636 LIRVDKFHKVF 646
           LI+ +K +  F
Sbjct: 657 LIKENKVNHAF 667



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 222/481 (46%), Gaps = 33/481 (6%)

Query: 166  YSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LG   R +K  E F     ++ +P  +++N L+    +ND++E AL + SKM 
Sbjct: 580  YNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMT 639

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
                  D + Y+ VI  L + NK++ +     +L K +  D + +       ++ G  K 
Sbjct: 640  VMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTI-----CTLLPGLVKC 694

Query: 279  GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA----VF-EELKESGLKP 333
            G    A   + +A+      +     +    L   G  +EAE     +F EEL  +G+  
Sbjct: 695  GQIGDA---ISIARDFMYQVRFRVNRSFWEDLM-GGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 334  RTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIV 392
                   L++   K      A  +  +  +  G+ P   +Y+ LI         E A  +
Sbjct: 751  EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810

Query: 393  LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             K+M+     P++F ++ +LA +   G+    F++ KEM S   +PD   YN++I +  K
Sbjct: 811  FKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAK 870

Query: 453  YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
             N L  A+  F  ++S    P   T+  LID   K GR + A  LFEEM + G  P    
Sbjct: 871  SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930

Query: 513  YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +NI+IN  G+    E   +L   M  +G+ P++ +YT LVD             CL G  
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL-----------CLAGRV 979

Query: 573  DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            D+A+  F  +++ GL P  +A N +IN  G+ QR  EA A+   M+  G+ PD+ TY +L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 633  M 633
            M
Sbjct: 1040 M 1040



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 24/364 (6%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +  ALS  G   +   V  +++++G      +YN L+   ++ G+  +A  V   M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ P   TYS L+ A       E   ++LKEME    +PN + ++  +      G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              +++ + M   G  PD   Y V+ID       L +A   F +M + G +PD + + TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D     G  D  +E + +M+  GY P   T+ I++++L +   +++       MR QG+
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECL------------------------EGLSDQAVN 577
           LPN+ TY TL+    ++GR +DA++ L                         G + +AV 
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M+  G+ P+ +A N+ + +  E  R  EA  +   ++ENGL PD VTY  +MK   
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 638 RVDK 641
           +V +
Sbjct: 519 KVGQ 522



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 231/540 (42%), Gaps = 69/540 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I I  LGR+ K+ EA+ + +R   +   P  +TY  LI A      LE A  L  KM+
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 221 -----------------------------------QDGYHCDFINYSLVIQSLTRTNKID 245
                                               DGY  D + +++++  L +    D
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +     +  +    I  +    N +I G  +AG    A++ LG  + VG+ P   TY  
Sbjct: 385 EAFAT--FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNI 442

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
            I     SG T +A   FE++K  G+ P   A NA L    +MG L++A+ + + +  +G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  TY++++  Y+  G+ + A  +L EM  +  +P+  + + ++      G     +
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+   MK   + P    YN ++   GK   +  A+  F+ M+ +   P+TI++NTL+DC 
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K    + A ++F +M      P   TYN +I  L ++ +          ++ + + P+ 
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681

Query: 546 VTYTTLVDIYGQSGRFDDAIEC-------------------------LEGLSDQAVNAFR 580
           VT  TL+    + G+  DAI                           +E   D+A+    
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL-QYMKENGLKPDVVTYTTLMKALIRV 639
            +  +G+   +  L  L+    + +R+  A+ +  ++ K+ G+ P + +Y  L+  L+ V
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 11/346 (3%)

Query: 287  FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            F    + +G+SP  A+Y  +I  L     T +A  +F+++K  G  P    +N LL  + 
Sbjct: 775  FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 347  KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
            K G + +   +  EM      PD  TY+++I + A +   + A     ++  S  +P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 407  IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
             Y  ++ G    G  +   ++ +EM   G +P+   +N++I+ +GK      A   F RM
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 467  LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            ++EGI PD  ++  L+DC    GR D A   F E++  G  P    YN +IN LG+ +R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 527  EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            E+   L   MR +G++P++ TY +L+   G           L G+ +QA   +  ++  G
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLG-----------LAGMVEQAKRMYEELQLAG 1063

Query: 587  LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            L+P     N+LI  +   +    A+ V + M  +G  P++ TY  L
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 2/322 (0%)

Query: 192  TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
            T  +YN LI         EKA +L   M+  G   D   +++++    ++ KI    L +
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE--LFE 844

Query: 252  LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            LYKE+   + + D    N VI   AK+ +  KA+ F          P   TY  +I  L+
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              GR  EA  +FEE+ + G KP    +N L+ GY K+G  + A  +   M   G+ PD  
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            +Y++L+D    AGR + A     E++ +   P+   Y+RI+ G       +    +  EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            ++ G+ PD + YN ++   G    +  A   ++ +   G+EPD  T+N LI  +      
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 492  DRAEELFEEMQERGYFPCTTTY 513
            + A  +++ M   G  P   TY
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 17/314 (5%)

Query: 277  KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
            KA D  K M+       VG +P   T+  ++     SG+  E   +++E+     KP   
Sbjct: 806  KAWDLFKDMK------NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859

Query: 337  AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             YN ++    K   L  A     ++  S   P   TY  LID  A  GR E A  + +EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 397  EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 KPN  I++ ++ GY   G+ +   Q+ K M + G+ PD   Y +++D       +
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 457  HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
              A+  F+ + S G++PD I +N +I+   K  R + A  L+ EM+ RG  P   TYN +
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 517  INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            +  LG     E  KR+   ++  GL P+V TY  L+  Y  S              + A 
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN-----------PEHAY 1088

Query: 577  NAFRVMRTDGLKPS 590
              ++ M  DG  P+
Sbjct: 1089 TVYKNMMVDGCNPN 1102



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 17/324 (5%)

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           AVFE +++  ++     Y  + K     G L+    V+++M ++G + + ++Y+ LI   
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
             +G    A  V + M     KP+   YS ++     + + +    +LKEM+  G+ P+ 
Sbjct: 203 IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV 262

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + + + I   G+   +  A   F RM  EG  PD +T+  LID     G+ + A+ELF +
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVK 322

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M+  G+ P    Y  +++   +    +  K     M A G +P+VVT+T LVD+  ++  
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
           FD+A              F VMR  G+ P+    N+LI       R  +A  +L  M+  
Sbjct: 383 FDEAFA-----------TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431

Query: 621 GLKPDVVTYTTLMKALIRVDKFHK 644
           G++P   TY       I +D F K
Sbjct: 432 GVQPTAYTYN------IFIDYFGK 449



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/556 (22%), Positives = 226/556 (40%), Gaps = 94/556 (16%)

Query: 166 YSILIHALGRSE---KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I I   G+S    K  E F   + + + P  +  NA + + A    L +A  + + +R
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   D + Y+++++  ++  ++D ++   L  E+  +  E D  ++N +I    KAG 
Sbjct: 500 ENGLAPDSVTYNMMMKCYSKVGQVDEAV--NLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +     + + LSP   TY  +++ L   GR  +A  +FE + E    P T ++N 
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 341 LLK-----------------------------------GYVKMGYLKDAEFVVSEMERSG 365
           LL                                    G +K   +  A +   ++++S 
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS- 676

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKE-MEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           + PD  T   L+      G+   A  + ++ M     + N   +  ++ G     E  + 
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKA 736

Query: 425 FQVLKEMKSSGVEPDTHFYNVMI----------------DTFGK----------YNCL-- 456
               +E+  +G+  +  F   ++                D F K          YNCL  
Sbjct: 737 IIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 457 -----HHAMAAFD---RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                H+   A+D    M + G  PD  T+N L+  H K G+     EL++EM  R   P
Sbjct: 797 ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYNI+I+ L +    +       ++ +    P   TY  L+D   + GR ++A+   
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E +SD            G KP+    N LIN +G+      A  + + M   G++PD+ +
Sbjct: 917 EEMSDY-----------GCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 629 YTTLMKALI---RVDK 641
           YT L+  L    RVD+
Sbjct: 966 YTILVDCLCLAGRVDE 981



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/532 (20%), Positives = 227/532 (42%), Gaps = 22/532 (4%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
            P  + ++++    S    +D A  ++S + + N C    ++ + LI +L   GR ++ ++
Sbjct: 505  PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-NGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563

Query: 182  AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             F   +  +L+P  +TYN L+S   +   ++KA+ L   M +     + I+++ ++    
Sbjct: 564  MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFC 623

Query: 240  RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            + ++++ +L  K++ ++     + D    N VI G  K    + A  F    +   + P 
Sbjct: 624  KNDEVELAL--KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPD 680

Query: 300  TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T   ++  L   G+  +A ++  + + +   +     +  L+ G +    +  A    
Sbjct: 681  HVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFA 740

Query: 359  SEMERSGVLPDEHTYSLLIDAYANAGRWESA-RIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             E+  +G+  ++     L+       R   A +I  K  +     P    Y+ ++    +
Sbjct: 741  EELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800

Query: 418  RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                ++ + + K+MK+ G  PD   +N+++   GK   +      +  M+S   +PD IT
Sbjct: 801  VHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAIT 860

Query: 478  WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            +N +I    K    D+A + F ++    + P   TY  +I+ L +  R E+  RL   M 
Sbjct: 861  YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920

Query: 538  AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
              G  PN   +  L++ YG+ G            ++ A   F+ M  +G++P   +   L
Sbjct: 921  DYGCKPNCAIFNILINGYGKIGD-----------TETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 598  INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            ++      R  EA      +K  GL PD + Y  ++  L +  +  +  + Y
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 11/293 (3%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++D   V   M++  +  D  TY  +  A +  G       VL +M  +    N++ Y+ 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++      G      +V + M S G++P    Y+ ++   GK       M     M   G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P+  T+   I    + G+ D A E+F  M + G  P   TY ++I+ L    + E+ K
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   M+A G  P+ V Y TL+D +   G  D   E            +  M  DG  P 
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE-----------FWSQMEADGYMPD 366

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            +    L++   + +   EAFA    M++ G+ P++ TY TL+  L+R  +  
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/534 (20%), Positives = 216/534 (40%), Gaps = 24/534 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           +P  +  ++L ++       D A+A    ++K  +  +    Y+ LI  L R+ ++ +A 
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHT-YNTLICGLLRAGRIEDAL 422

Query: 184 LL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
            L     S   + T  TYN  I    ++ +  KA+    KM+  G   + +  +  + SL
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
               ++  +  + ++  +  + +  D    N ++  ++K G   +A+  L      G  P
Sbjct: 483 AEMGRLREA--KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
                 ++I +L  +GR  EA  +F+ +K+  L P    YN LL G  K G ++ A  + 
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M      P+  +++ L+D +      E A  +  +M V   KP+   Y+ ++ G    
Sbjct: 601 ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA-AFDRMLSEGIEPDTIT 477
            +    F    ++K S + PD      ++    K   +  A++ A D M       +   
Sbjct: 661 NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM- 536
           W  L+         D+A    EE+   G     +    ++ +L + +R     ++     
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFT 779

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-GLSDQAVNAFRVMRTDGLKPSNLALN 595
           +  G+ P + +Y  L+             E LE   +++A + F+ M+  G  P     N
Sbjct: 780 KKLGISPTLASYNCLIG------------ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            L+   G+  +  E F + + M     KPD +TY  ++ +L + +   K    +
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 13/243 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  I      RG  ++   VL +M+ +G   + + YN +I    +      A+  + RM+
Sbjct: 160 YLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 219

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           SEG++P   T++ L+    K    +    L +EM++ G  P   T+ I I +LG   + +
Sbjct: 220 SEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   +   M  +G  P++VTYT L+D    +G+ ++A E            F  M+ +G 
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE-----------LFVKMKANGH 328

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVL-QYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           KP  +   +L++ F  D  D + F      M+ +G  PDVVT+T L+  L +   F + F
Sbjct: 329 KPDQVIYITLLDKF-NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 647 SSY 649
           +++
Sbjct: 388 ATF 390



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 16/163 (9%)

Query: 491 YDRAEEL---FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           +D+ E++   FE MQ++       TY  +   L  +     +  +L  MR  G + N  +
Sbjct: 135 HDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYS 194

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+ +  QSG   +A+E            +R M ++GLKPS    ++L+ A G+ +RD
Sbjct: 195 YNGLIHLLIQSGFCGEALE-----------VYRRMVSEGLKPSLKTYSALMVALGK-KRD 242

Query: 608 AEAFAVL-QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +E   VL + M++ GL+P+V T+T  ++ L R  K  + +  +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIF 285


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 219/452 (48%), Gaps = 25/452 (5%)

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           Y    LS+   LTP TY+  ISA  +++ +E    L++ M + G+  D    ++ I  L 
Sbjct: 212 YYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLC 271

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF---LGMAQ---G 293
           + N++  +L          +K+   G +  DV+      G      RF   +G+ +    
Sbjct: 272 KQNRLHDALQM-------VEKMRGKGTI-PDVVTYTTVVGCLCNNKRFSEAVGLWEEMVK 323

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +GL P      A+I  L  + +  EA  +   +    ++     YNAL+ G+ + G +  
Sbjct: 324 MGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDK 383

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++S M  +G  P   TY++L++ Y   G  E A  ++ +ME S   P+ + Y+++L 
Sbjct: 384 AYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLK 443

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G     +  + F  + +    G   D    N++ID F K   +  A+  F  M  +G++ 
Sbjct: 444 GLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQA 503

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+ TLI+  F  G Y+ AEELFE+M +    P    YNIM++ L +    +  +++ 
Sbjct: 504 DAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF 563

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M  + +LP++VTY TL+   G++ R           + +A++ F+ MRT G++P +L 
Sbjct: 564 LHMIQKEILPDIVTYNTLIYWLGKNSR-----------AMEALDLFKDMRTKGVEPDSLT 612

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
              LIN   ++ R   A+ V +YM ENG+  D
Sbjct: 613 FKYLINGLLDEGRSTLAYEVWEYMMENGIILD 644



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 166/411 (40%), Gaps = 59/411 (14%)

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           ++ GMA   GL     TY+  I+AL  S R    E +  ++   G  P   A N  +   
Sbjct: 211 KYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCL 270

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K   L DA  +V +M   G +PD  TY+ ++    N  R+  A  + +EM     KP+ 
Sbjct: 271 CKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDV 330

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
                ++ G     + +  F++   M S  +E     YN +I  F +   +  A      
Sbjct: 331 VACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISF 390

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP------------CTT-- 511
           M + G EP  +T+N L++ +   G  ++AE L  +M+  G  P            C T  
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQ 450

Query: 512 ---------------------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
                                + NI+I+   + ++ +    L   M  +G+  + VTY T
Sbjct: 451 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGT 510

Query: 551 LVDIYGQSGRFDDAIECLEGL----SDQAVNAFRVM-----RTDGLK------------- 588
           L++     G ++ A E  E +     D  VN + +M     +   LK             
Sbjct: 511 LINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKE 570

Query: 589 --PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             P  +  N+LI   G++ R  EA  + + M+  G++PD +T+  L+  L+
Sbjct: 571 ILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLL 621



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 147/369 (39%), Gaps = 46/369 (12%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ +    FLG  +  G++   + Y  +++    +G+       F+E+  SG +     Y
Sbjct: 134 GNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDY 193

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N  +                      GVL     + L+   Y  A    S  + L     
Sbjct: 194 NRYI----------------------GVLIKNCCFDLVEKYYGMA---LSKGLCL----- 223

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                  F YSR ++        +   ++L +M   G  PD    N+ ID   K N LH 
Sbjct: 224 -----TPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHD 278

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+   ++M  +G  PD +T+ T++ C     R+  A  L+EEM + G  P       +I 
Sbjct: 279 ALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIF 338

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  + E+   L   M +  +  +V  Y  L+  + ++G             D+A   
Sbjct: 339 GLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSI-----------DKAYTI 387

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              MRT+G +P  +  N L+N +       +A  ++  M+ +G+ PD  +Y  L+K L +
Sbjct: 388 ISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCK 447

Query: 639 VDKFHKVFS 647
             +  K F+
Sbjct: 448 THQLDKAFA 456


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 211/458 (46%), Gaps = 37/458 (8%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           ++  L P   TYN L+ A  +ND ++ A  L  +M   G   D + Y+ ++ SL +  KI
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 245 DSSLLQKLYKEIECDKIELDGQ------LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
           D             D  EL G+      + N +I G  K G    A++ LG     G+ P
Sbjct: 231 D-------------DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              +Y+ +I +L  SG    A A+F ++   G       +  L+KG    G L +A  + 
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M + G  P+   Y+ LI    + G  E A  V  +M+ S   PN   YS ++ G+   
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+     +    M S G  P+   Y  M+D   K +    A +  ++M  EG  P+TIT+
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITF 457

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NT I      GR + A +L E MQ  G  P  TTYN +++ L    ++E+   L   + A
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + L PN+VTY T+  +YG    F  A     G+  +A+  F      G  P ++  N++I
Sbjct: 518 RNLQPNLVTYNTV--LYG----FSRA-----GMMGEALQLFGKALVRGTAPDSITYNTMI 566

Query: 599 NAF---GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A+   G+ +  A+    +  MKE    PD++TYT+L+
Sbjct: 567 HAYCKQGKVKIAAQLVERVSSMKE--WHPDIITYTSLI 602



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 252/594 (42%), Gaps = 45/594 (7%)

Query: 52  FSSSSFTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLN 111
            +S+   + ++  +++   + DVL   K   + + +L F S  +NS +    AS+     
Sbjct: 22  LNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTAST----- 76

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL-- 169
                    YR +   L              +D+   ++  ++   +    +L   I+  
Sbjct: 77  ---------YRVMIERL---------GRECEMDMVQYILQQMKMDGINCCEDLFICIING 118

Query: 170 IHALGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCD 227
              +G +E+  + F         P    YN L+ A    +  +    L + M++DG   +
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
              Y++++++L + +++D++   KL+ E+       D      ++    KAG    A   
Sbjct: 179 VFTYNILLKALCKNDRVDAA--HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
            G        P    Y A+I  +   GR   A  +  E+ ++G+ P   +Y+ ++     
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G ++ A  + ++M   G   + HT++ LI      G+   A  + K M     +PN   
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G  +   QV  +M+ SG  P+   Y+++ID F K   L  A   ++RM+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           S G  P+ +T+  ++D   K   +D+A  L E+M   G  P T T+N  I  L    R E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
              +LL  M+  G LPN+ TY  L+D   +  ++++A     GL       F+ +    L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF----GL-------FQEIEARNL 520

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +P+ +  N+++  F       EA  +       G  PD +TY T++ A  +  K
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 200/443 (45%), Gaps = 31/443 (6%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y ++I+ L R  ++D  ++Q + ++++ D I     L   +I G+ + G A +A++    
Sbjct: 77  YRVMIERLGRECEMD--MVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYR 134

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G  P    Y  ++ AL +  +      ++  +K+ GL P    YN LLK   K   
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +  A  +  EM   G  PD  TY+ ++ +   AG+ + AR +         KP+  +Y+ 
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G    G  +   ++L EM  +GV+P+   Y+ +I++      +  A A F +M   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            + +  T+  LI   F  G+   A +L++ M + G  P    YN +I+ L      E+  
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
           ++   M+  G LPNV TY+ L+D + +SG    A E                        
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C   + DQA +    M  +G  P+ +  N+ I     + R   A  +L+ M+ +G  P++
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489

Query: 627 VTYTTLMKALIRVDKFHKVFSSY 649
            TY  L+ AL R++K+ + F  +
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLF 512



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 218/508 (42%), Gaps = 49/508 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC  N  +D A+ +   +     C    + Y+ ++ +L ++ K+ +A  L+ R
Sbjct: 182 YNILLKALCK-NDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARELAGR 239

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
            + +   YNALI    +   +E A+ L+ +M  +G   + ++YS +I SL  +  ++ + 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              L+ ++                  F +  DA+                   T+  +I 
Sbjct: 300 --ALFAQM------------------FLRGCDAN-----------------IHTFTPLIK 322

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G+  EA  +++ + + G +P   AYN L+ G    G L++A  V  +M+RSG LP
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TYS+LID +A +G    A      M     +PN   Y+ ++        + +   ++
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M   G  P+T  +N  I        +  AM   +RM   G  P+  T+N L+D  F+ 
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            +Y+ A  LF+E++ R   P   TYN ++          +  +L G    +G  P+ +TY
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            T++  Y + G+   A + +E          RV       P  +   SLI          
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVE----------RVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           EA A L      G+ P+  T+  L++  
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 173/407 (42%), Gaps = 55/407 (13%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
            P++++L+  +C     I++A  ++  +  + +     + YS +I++L  S  +  AF L
Sbjct: 244 VPVYNALIDGMCKE-GRIEVAIKLLGEMMDNGV-DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             +  L        T+  LI  C     L +AL+L   M QDG   + + Y+ +I  L  
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGVG 295
              ++ +L         CD+++  G L N      +I GFAK+GD   A          G
Sbjct: 362 NGSLEEALQV-------CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   TY  ++  L  +    +A ++ E++   G  P T  +N  +KG    G ++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++  M+  G LP+  TY+ L+DA     ++E A  + +E+E  + +PN   Y+ +L G+
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN--------------------- 454
              G      Q+  +    G  PD+  YN MI  + K                       
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 455 -----------C----LHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
                      C    +  AMA  D+ +++GI P+  TWN L+ C F
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 215/463 (46%), Gaps = 26/463 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           + N LI+   R + +  A++++ KM + G   D I ++ +I       +I  ++   L+ 
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAV--GLFN 186

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+     + D    + VI G  K+G+ S A++ L   +  G  P    Y  +I +L    
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A  +  E+ + G+ P    Y+ +L G+  +G+L +A  + +EM    V+P+  T++
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFT 306

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D     G    AR V + M    A+PN++ Y+ ++ GY    +     +VL  M   
Sbjct: 307 ILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK 366

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P  H YN++I+ + K   L  A +    M  + + PDT+T++TL+    + GR   A
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF+EM   G  P   TY+ +++ L +    ++  +LL +M+   + P++V Y  L++ 
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486

Query: 555 YGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPS 590
              +G+ + A E                          EGLSD+A   FR M  DG  P+
Sbjct: 487 MFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPN 546

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           + + N +I  F ++Q  + A  ++  M       D  T+  L+
Sbjct: 547 SCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 183/385 (47%), Gaps = 2/385 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++Y+ +I+   ++ +   AL L+ KM + G   + + Y+ +I SL +   ++ ++   L 
Sbjct: 198 ISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM--DLL 255

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    I  D    + ++ GF   G  ++A        G  + P T T+  ++  L   
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  VFE + + G +P    YNAL+ GY     + +A+ V+  M   G  P  H+Y
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI+ Y    R + A+ +L EM      P++  YS ++ G    G  Q    + KEM S
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG+ PD   Y+ ++D   K+  L  A+     M    IEPD + +N LI+  F  G+ + 
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ELF ++   G  P   TY IMI  L ++   ++   L   M   G LPN  +Y  ++ 
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNA 578
            + Q+     AI  ++ +  +  +A
Sbjct: 556 GFLQNQDSSTAIRLIDEMVGKRFSA 580



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 218/481 (45%), Gaps = 30/481 (6%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L    R + + +   + + A+       ++L ++M   G   +  + +++I  L R N 
Sbjct: 83  MLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNH 142

Query: 244 I--DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +    S+L K++K      I+ D    N +I G    G+  +A+         G  P   
Sbjct: 143 VVFAISVLGKMFKL----GIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVI 198

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y+ VI  L  SG T  A  +  +++E G KP   AY  ++    K   + DA  ++SEM
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ PD  TYS ++  + + G    A I+  EM   +  PN+  ++ ++ G    G  
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                V + M   G EP+ + YN ++D +   N +  A    D M+ +G  P   ++N L
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+ + K  R D A+ L  EM E+   P T TY+ ++  L +  R ++   L   M + GL
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGL 438

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA----------------------- 578
           LP+++TY+TL+D   + G  D+A++ L+ + +  +                         
Sbjct: 439 LPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKE 498

Query: 579 -FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  +  DG++P+      +I    ++    EA+ + + M+++G  P+  +Y  +++  +
Sbjct: 499 LFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFL 558

Query: 638 R 638
           +
Sbjct: 559 Q 559



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 187/402 (46%), Gaps = 23/402 (5%)

Query: 258 CDKIELDGQL-----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           C++++L G       LN +I    +      A+  LG    +G+ P   T+  +I     
Sbjct: 115 CNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCI 174

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G   EA  +F E+   G +P   +Y+ ++ G  K G    A  ++ +ME  G  P+   
Sbjct: 175 EGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA 234

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ +ID+         A  +L EM      P+   YS IL G+   G       +  EM 
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P+T  + +++D   K   +  A   F+ M  +G EP+  T+N L+D +    + D
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A+++ + M ++G  P   +YNI+IN   ++ R ++ K LL  M  + L P+ VTY+TL+
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               Q GR             +A+N F+ M + GL P  +  ++L++   +     EA  
Sbjct: 415 QGLCQVGR-----------PQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFS 647
           +L+ M+E+ ++PD+V Y  L++ +    K       F K+F+
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 180/394 (45%), Gaps = 7/394 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS +I+ L +S     A  L ++      +   + Y  +I +  ++  +  A++L+S+M 
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + YS ++        ++ + +  L+ E+    +  +      ++ G  K G 
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATI--LFNEMVGRNVMPNTVTFTILVDGLCKEGM 317

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S+A          G  P   TY A++     + +  EA+ V + + + G  P   +YN 
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K   L +A+ ++ EM    + PD  TYS L+      GR + A  + KEM  S 
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS +L G    G      ++LK M+ S +EPD   YN++I+       L  A 
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F ++ ++GI+P   T+  +I    K G  D A ELF +M++ G+ P + +YN++I   
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGF 557

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            + +      RL+  M  +    +  T+  L+D+
Sbjct: 558 LQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 160/378 (42%), Gaps = 31/378 (8%)

Query: 310 LSNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           LSN+  +I+ A A F  +     +P    +   L    K         + ++M+  GV  
Sbjct: 66  LSNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTH 125

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           + ++ ++LI+          A  VL +M     +P++  ++ ++ G    GE +    + 
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM   G +PD   Y+ +I+   K      A+    +M  +G +P+ + + T+ID   K 
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              + A +L  EM +RG  P   TY+ +++         +   L   M  + ++PN VT+
Sbjct: 246 TLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 549 TTLVDIYGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRT 584
           T LVD   + G   +A                          CL    D+A     +M  
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G  P   + N LIN + + +R  EA ++L  M E  L PD VTY+TLM+ L +V +  +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 645 VFSSYLFFNIYKMLSYSG 662
                   N++K +  SG
Sbjct: 426 A------LNLFKEMCSSG 437



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/401 (21%), Positives = 188/401 (46%), Gaps = 9/401 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +++  LC S ++  +A  ++  +++   C    + Y+ +I +L +   + +A  LLS+
Sbjct: 200 YSTVINGLCKSGNT-SMALQLLRKMEEKG-CKPNLVAYTTIIDSLCKDTLVNDAMDLLSE 257

Query: 188 R-QRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              R  P   +TY+ ++        L +A  L ++M       + + +++++  L +   
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +  + +++ +     E +    N ++ G+       +A + L +    G +P   +Y
Sbjct: 318 VSEA--RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I       R  EA+++  E+ E  L P T  Y+ L++G  ++G  ++A  +  EM  
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           SG+LPD  TYS L+D     G  + A  +LK M+ S  +P+  +Y+ ++ G    G+ + 
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++  ++ + G++P    Y +MI    K      A   F +M  +G  P++ ++N +I 
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
              +      A  L +EM  + +   ++T+ ++++L    E
Sbjct: 556 GFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDE 596


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 220/480 (45%), Gaps = 52/480 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N+LI    R + ++ A +L  KM   G+  D ++Y+ +I+ L    +ID ++  +L+ 
Sbjct: 12  TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV--ELFG 69

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E++    + D  +   ++ G   A    + +  L   + +G  P T  YAAV+       
Sbjct: 70  EMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRER 125

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EAE + +E+ E GL P      A++  Y K G + DA  V+  M+  G  P+  TY+
Sbjct: 126 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 185

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+  + N G+   A  +L +M      P++  Y+ ++ G    G  +  F++L+ M+  
Sbjct: 186 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 245

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D + YN +I+   K      A + FD + + GI+P+ +T+N+LI+   K G+ D A
Sbjct: 246 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305

Query: 495 EELFE-----------------------------------EMQERGYFPCTTTYNIMINL 519
            +  E                                   EM ++   P T  Y I+I+ 
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L ++  +  V R  G M + G  P+VVTYTT +  Y           C+EG  ++A N  
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY-----------CIEGRLNEAENVL 414

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M  +G+    +A N+L++      +   A ++L+ M      P+  TY  L++ L+R+
Sbjct: 415 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRM 474



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 187/408 (45%), Gaps = 52/408 (12%)

Query: 264 DGQLLNDVIVGFAK------AGDASKAMRFLGMAQGV--------GLS------------ 297
           D    N +IVG+ +      A D    M   G AQ V        GL             
Sbjct: 9   DAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 68

Query: 298 -----PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
                P    YAA++  L N+ R  E   +   +KE G +P T+AY A++    +    K
Sbjct: 69  GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +AE ++ EM   G+ P   T + +I+AY   GR   A  VL+ M++   KPN + Y+ ++
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH-HAMAAFDRML---- 467
            G+ + G+  +   +L +M++ GV PD   YN++I    +  C+  H  +AF R+L    
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI----RGQCIDGHIESAF-RLLRLME 243

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G+  D  T+N LI+   K GR D+A  LF+ ++ RG  P   T+N +IN L +  + +
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
              + L  M + G  P+  TY++ ++             C    S + ++    M    +
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHL-----------CKMKGSQEGLSFIGEMLQKDV 352

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           KPS +    +I+   +++           M  +G  PDVVTYTT M+A
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 400



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 145/313 (46%), Gaps = 15/313 (4%)

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG +P    +N+L+ GY +   +  A  +  +M   G   D  +Y+ LI+    AGR + 
Sbjct: 4   SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE 63

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  EM+    +P+  +Y+ ++ G  +    +    +L+ MK  G  P T  Y  ++D
Sbjct: 64  AVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD 119

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +      A      M  +G+ P  +T   +I+ + K GR   A  + E M+ RG  P
Sbjct: 120 FRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKP 179

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN ++     + +      LL  MRA G+ P+ VTY  L  I GQ         C+
Sbjct: 180 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLL--IRGQ---------CI 228

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           +G  + A    R+M  DGL       N+LINA  +D R  +A ++   ++  G+KP+ VT
Sbjct: 229 DGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVT 288

Query: 629 YTTLMKALIRVDK 641
           + +L+  L +  K
Sbjct: 289 FNSLINGLCKSGK 301



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 117/509 (22%), Positives = 203/509 (39%), Gaps = 41/509 (8%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARND 207
           L K   C      Y+ L+       K+++A  L  + R   + P  +TYN LI     + 
Sbjct: 171 LMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDG 230

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            +E A  L+  M  DG   D   Y+ +I +L +  + D +    L+  +E   I+ +   
Sbjct: 231 HIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC--SLFDSLETRGIKPNAVT 288

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G  K+G A  A +FL      G +P T TY++ I  L     + E  +   E+ 
Sbjct: 289 FNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEML 348

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  +KP T  Y  ++   +K            EM  SG  PD  TY+  + AY   GR  
Sbjct: 349 QKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLN 408

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  VL EM  +    ++  Y+ ++ G+   G+      +LK+M S    P+   Y +++
Sbjct: 409 EAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468

Query: 448 DTFGKYNCLHHAM-----------------AAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               +   +   +                   FD M      P++ T++++++   + GR
Sbjct: 469 RHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGR 528

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + A  L   M+E         Y  ++    + +R+ D   L+ +M   G +P +++Y  
Sbjct: 529 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQH 588

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRD 607
           L+     SG         EG +D+A   F   R     P  +    +I+     G     
Sbjct: 589 LL-----SGLI------CEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDIS 637

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            E   +L+ M     +P   TY  L + L
Sbjct: 638 REMIIMLERMN---CRPSHQTYAMLTEEL 663



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 15/217 (6%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M  SG  PD + +N +I  + + N +  A   FD+M   G   D +++ TLI+   + GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A ELF EM +    P    Y  ++  L   ER E+   +L  M+  G  P+   Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           +VD             C E  + +A    + M   GL P  +   ++INA+ ++ R ++A
Sbjct: 117 VVDF-----------RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 165

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             VL+ MK  G KP+V TY  L++      K HK  +
Sbjct: 166 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMT 202


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 218/478 (45%), Gaps = 27/478 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           Y I+IH   R E       L   Q    +T N LI++      +  A ++ +K+ + GY 
Sbjct: 65  YPIVIHLFQRME-------LHGIQS-NYITLNILINSYCHLRQINSAFSVFAKILKLGYQ 116

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            D I Y+ +I+ L    ++  SL    +  +    I+LD      +I G  K G    A+
Sbjct: 117 PDIITYTTLIRGLCLNGQVKESL--NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPAL 174

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           R L   +G    P    Y  +I  L       +A  ++ E+ E  + P    Y +L+ G+
Sbjct: 175 RLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGF 234

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
             +G L  A  +++EM    V P+  T++ L+D     G+   A+ ++  M      P+ 
Sbjct: 235 CIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDV 294

Query: 406 FIYSRILAGY---RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           F Y+ ++ GY   ++ G+ +  F ++ +M   GV  D H Y+VMI    K   L  AM  
Sbjct: 295 FTYNALMDGYFLVKEAGKAKNVFNIMAQM---GVTCDVHSYSVMISGLSKMKMLDEAMDL 351

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F+ M +E + PD + +++LID   K GR + A +  +EM +RG  P   TY  +I+ L +
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
             + +    LL  ++ QG+  N+ TY  LVD   + GR  DA         Q V  F+ +
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDA---------QKV--FQDL 460

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
              G     +  + +IN   ++    EA  +L  M++ G  PD + Y T++ A    D
Sbjct: 461 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKD 518



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 204/447 (45%), Gaps = 19/447 (4%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           +D   + N M +MR        I +  ++ SL +T      ++  L++ +E   I+ +  
Sbjct: 31  NDAIDSFNRMLRMRPPP---PIIKFGKILGSLVKTKH--YPIVIHLFQRMELHGIQSNYI 85

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  +      + A         +G  P   TY  +I  L  +G+  E+    + L
Sbjct: 86  TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G+K    +Y  L+ G  K+G    A  ++ ++E     PD   Y+ +ID        
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  EM      PN   Y+ ++ G+   G+  + F +L EM    V P+   +N +
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A +    M+ EG+ PD  T+N L+D +F      +A+ +F  M + G 
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                +Y++MI+ L + +  ++   L   MR + ++P+VV Y++L+D   +SGR + A++
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            ++ + D+           G  P+ +   SLI+A  +  +  +A A+L+ +K+ G++ ++
Sbjct: 386 YVDEMHDR-----------GQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434

Query: 627 VTYTTLMKALI---RVDKFHKVFSSYL 650
            TY  L+  L    R+    KVF   L
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQDLL 461



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 209/486 (43%), Gaps = 15/486 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           LL     H+L       ++F    R R  P  + +  ++ +  +       ++L  +M  
Sbjct: 18  LLSHTHFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMEL 77

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   ++I  +++I S     +I+S+    ++ +I     + D      +I G    G  
Sbjct: 78  HGIQSNYITLNILINSYCHLRQINSAF--SVFAKILKLGYQPDIITYTTLIRGLCLNGQV 135

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +++ F       G+     +Y  +I  L   G+T  A  +  +++    +P    YN +
Sbjct: 136 KESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTI 195

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K   ++DA  +  EM    V P+  TY+ LI  +   G+ + A  +L EM + + 
Sbjct: 196 IDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNV 255

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN   ++ ++ G    G+ +    ++  M   GV PD   YN ++D +        A  
Sbjct: 256 NPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKN 315

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F+ M   G+  D  +++ +I    K    D A +LFE M+     P    Y+ +I+ L 
Sbjct: 316 VFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLC 375

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  R     + +  M  +G  PNV+TYT+L+D   +S + D AI  L+ + DQ       
Sbjct: 376 KSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ------- 428

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               G++ +    N L++   +D R  +A  V Q +   G   DVVTY+ ++  L +   
Sbjct: 429 ----GIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESL 484

Query: 642 FHKVFS 647
           F +  +
Sbjct: 485 FDEALT 490



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 135/271 (49%), Gaps = 7/271 (2%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ L+  L +  K+ EA     +  ++ + P   TYNAL+       +  KA N+ + M 
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMA 321

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G  CD  +YS++I  L++   +D ++   L++ +  + +  D    + +I G  K+G 
Sbjct: 322 QMGVTCDVHSYSVMISGLSKMKMLDEAM--DLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A++++      G  P   TY ++I AL  S +  +A A+ +++K+ G++     YN 
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G L DA+ V  ++   G   D  TYS++I+       ++ A  +L +ME   
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
             P++  Y  I+  + ++    +  ++L+EM
Sbjct: 500 CVPDAIAYETIINAFFEKDMNDKAEKLLREM 530


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 227/486 (46%), Gaps = 24/486 (4%)

Query: 169 LIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LI AL ++ K+ EA      +++++   + + YN+L+    +   ++  L L+ +M +  
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   Y++++   +R N++D +L  +L+K +     + +      +I G   A    +
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDAL--ELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEE 352

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A  F   A  V       +Y  VI  L++S R  EA  +FE+LK +G  P   AY A++ 
Sbjct: 353 AKAFFDEALDV------ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVID 406

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G +K G ++D      +M  S  +P   TY+++ID    A     A  V ++M      P
Sbjct: 407 GLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 466

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           ++  Y+ ++ G+    +     ++L  M + G EP    Y  ++  F K + ++ A    
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            +M   G EP    + +L+  +   GR + A ++  EM  RG  P    Y  +I+LL   
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            R  + + +  +M  +G  P+ +TY T++  + + G  + A E LE           +M 
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILE-----------LMA 635

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             G+ P   A NSL++ + + +R  +AF V   M  +G+KP+ VT+  LM  L +  K  
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 695

Query: 644 KVFSSY 649
           + FS +
Sbjct: 696 RAFSLF 701



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 212/484 (43%), Gaps = 55/484 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN L++  +R + L+ AL L   +   G   +   Y+ +IQ L    +++ +  +  + 
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA--KAFFD 358

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E       LD      VI G A +    +A       +  G SP    Y AVI  L  +G
Sbjct: 359 E------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +    FE++  S   P    Y  ++ G  K   L DA  V  +M + G +PD  TY+
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472

Query: 375 LLIDAYANAGRWESARI-----------------------------------VLKEMEVS 399
            LID ++ A + + AR                                    V+ +M   
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P  FI++ +L+ Y  +G  +  +QVL EM + G  PD   Y  +ID       +  A
Sbjct: 533 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEA 592

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD M+ +G  PD +T+ T+I    K G  + A E+ E M + G  P    YN +++ 
Sbjct: 593 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             + ER +    +   M A G+ PN VT+  L+      G F D      G +D+A + F
Sbjct: 653 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM-----HGLFKD------GKTDRAFSLF 701

Query: 580 RVM-RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + M   D + P+ ++   LI+  G+  R +EAF+  Q M + G+ P+  TYT+L+ +L +
Sbjct: 702 KEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761

Query: 639 VDKF 642
             + 
Sbjct: 762 AGRI 765



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 222/526 (42%), Gaps = 85/526 (16%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           Y+ +I  L  ++++ EA      + L  ++Y  +I   A +  +++A  L  K++  G  
Sbjct: 337 YTTIIQGLYDAQRMEEAKAFFD-EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK---------IELDG----QLLND-- 270
            + + Y+ VI  L +  +I+  L  K ++++             + +DG    Q+L D  
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGL--KNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDAC 453

Query: 271 --------------------VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
                               +I GF+KA    +A + L +    G  P   TY +++   
Sbjct: 454 KVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
                  EA+ V  +++E G +P    + +LL  Y+  G  ++A  V++EM   G  PD 
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+ LID   + GR   AR V   M      P++  Y  I+  +   G  +   ++L+ 
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 633

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M  SGV PD   YN ++D + K   +  A   +DRM++ GI+P+ +T+N L+   FK G+
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693

Query: 491 YDRAEELFEEMQE------------------------------------RGYFPCTTTYN 514
            DRA  LF+EM E                                    RG  P   TY 
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYT 753

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I  L +  R  + K+L+ +M   G+ P+V  Y+ L+     +G  D +      + D 
Sbjct: 754 SLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI-----TGLIDSS------MVDT 802

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
           A + F+ M   G  P+ +    L   F    R  +  AV Q+  + 
Sbjct: 803 AWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQG 848



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/554 (22%), Positives = 240/554 (43%), Gaps = 43/554 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++  L +S   +D AY   + +   N C    + ++ LIH   ++ +     +L  +
Sbjct: 58  YNTVISGL-ASIDKMDEAYKFFNSMI-DNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ 115

Query: 189 --QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
             +R  P    Y ++I    +  DL+    ++ +M   G   D   Y ++I  L +  ++
Sbjct: 116 ALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D +   +L++ +       D      +I   +  G   +A          G  P      
Sbjct: 176 DEAY--ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQD 233

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           ++I AL  +G+  EA  +++ +    +     AYN+L+ GY K+G + D   ++ +M   
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVEC 293

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              PD  TY++L+  ++ A R + A  + K +     KPN+  Y+ I+ G  D       
Sbjct: 294 DNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA------ 347

Query: 425 FQVLKEMKSSGVEP-DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            Q ++E K+   E  D   Y  +I        +  A   F+++ + G  P+ + +  +ID
Sbjct: 348 -QRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVID 406

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR +   + FE+M      P  TTY ++I+ L + +   D  ++   M  +G +P
Sbjct: 407 GLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 466

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAF 579
           + +TYTTL+D + ++ + D+A + L+                         + ++A    
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI-- 637
             MR  G +P      SL++ +    R  EA+ VL  M   G  PDV+ YT+L+  L   
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586

Query: 638 -RVDKFHKVFSSYL 650
            RV +   VF S +
Sbjct: 587 GRVPEARHVFDSMI 600



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 186/408 (45%), Gaps = 8/408 (1%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C      Y+++I  L +++ L +A   F    ++   P  +TY  LI   ++   +++A 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+  M   G     + Y  ++    + + I+ +  +++  ++     E    +   ++ 
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA--KEVIAQMRERGCEPGLFIFTSLLS 546

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +   G A +A + L      G +P    Y ++I  L ++GR  EA  VF+ + E G  P
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 606

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  +++ + K+G ++ A  ++  M +SGV PD   Y+ L+D Y    R + A  V 
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 666

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGK 452
             M  S  KPN+  ++ ++ G    G+  R F + KEM +   V P    Y ++ID  GK
Sbjct: 667 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGK 726

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A + F  M+  GI P+  T+ +LI    K GR   A++L E+M + G  P    
Sbjct: 727 AGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 786

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           Y+ +I  L +    +    +   M  +G  PN VTY  L   +  +GR
Sbjct: 787 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 199/481 (41%), Gaps = 55/481 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N +++   +   ++KA+ L  +M   G     ++Y+ VI  L   +K+D +   K +  +
Sbjct: 24  NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAY--KFFNSM 81

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
             +  E D      +I GF KAG        L  A      P    Y +VI     +G  
Sbjct: 82  IDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLYTSVIHGYCKAGDL 140

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
                + EE+  +G  P   AY  L+    K+G + +A  +   M +SG L D  T+  L
Sbjct: 141 DTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTL 200

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKP-----NSFI------------------------ 407
           I+A +N G+ + A  + +EM     +P     +S I                        
Sbjct: 201 IEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKV 260

Query: 408 ------YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
                 Y+ ++ GY   G      ++L +M      PD   YN+++  F + N L  A+ 
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALE 320

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  + S G +P+  T+ T+I   +   R + A+  F+E  +        +Y  +I  L 
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD------VISYTTVIKGLA 374

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           + +R ++   L   ++  G  PNVV YT ++D   ++GR +D ++  E +S  +      
Sbjct: 375 DSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC----- 429

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                  P+      +I+   + Q   +A  V + M + G  PD +TYTTL+    +  K
Sbjct: 430 ------VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 642 F 642
            
Sbjct: 484 M 484



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 191/442 (43%), Gaps = 22/442 (4%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           +E+AL+ + +M   G   D +N ++V+  L +  KID ++  +L+ E+     E      
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAI--ELFLEMPSMGCEPTIVSY 58

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE-LK 327
           N VI G A      +A +F       G  P    +  +I     +G+      +  + LK
Sbjct: 59  NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK 118

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
               +P    Y +++ GY K G L     ++ EM  +G +PD   Y +LID     GR +
Sbjct: 119 R--FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  + + M  S    +   +  ++    + G+     ++ +EM   G EP     + +I
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   +  A   +  ++++ +    + +N+L+D + K GR D   +L  +M E   F
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYNI++       R +D   L   + + G  PN  TYTT++     + R ++A   
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA--- 353

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
            +   D+A++              ++  ++I    + +R  EA  + + +K  G  P+VV
Sbjct: 354 -KAFFDEALDV-------------ISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVV 399

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
            YT ++  L++  +      ++
Sbjct: 400 AYTAVIDGLLKAGRIEDGLKNF 421



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 139/338 (41%), Gaps = 31/338 (9%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A   + EM  +G++PD    +++++    A + + A  +  EM     +P    Y+ 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++G     +    ++    M  +G EPD   +  +I  F K           ++ L   
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD   + ++I  + K G  D   ++ EEM   G  P    Y ++I+ L +  R ++  
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            L   MR  G L + VT+ TL++     G+ D+A E                        
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G  D+A   ++ +    +  S +A NSL++ + +  R  +   +L  M E    PD+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 627 VTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
            TY  L+    R ++            ++K+LS  G K
Sbjct: 300 QTYNILVAGFSRANRLDDA------LELFKLLSSYGCK 331



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 10/297 (3%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           AY V++ +     C    +LY+ LI  L   GR  +    F     +   P  LTY  +I
Sbjct: 557 AYQVLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
              ++  ++E A  ++  M + G   D   Y+ ++    +  ++D +    +Y  +    
Sbjct: 616 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF--GVYDRMVASG 673

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           I+ +    N ++ G  K G   +A   F  M +   + P   +Y  +I  L  +GR  EA
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEA 733

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
            + F+E+ + G+ P    Y +L+    K G + +A+ +V +M + GV PD   YS LI  
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 793

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
             ++   ++A  V +EM      PN   Y  +  G+R  G      + +K+  S GV
Sbjct: 794 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR-ALDLEAVKQHFSQGV 849


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 197/391 (50%), Gaps = 3/391 (0%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           +G  E +Y+  ++ +R  +  +T++ +I+   +    +KA +++  M+  G+    I Y+
Sbjct: 210 IGVVESVYKE-MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I    +  K+  +    L KE+   +I  +    N +I GF +  + + A +     Q
Sbjct: 269 TIIDGYCKAGKMFKA--DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P   TY ++I  L ++G+  EA  + +++   GLKP    YNAL+ G+ K   LK
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A  ++ ++ + G+ P+  T++ LIDAY  AGR + A ++   M  +   PN   Y+ ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G  +   ++ KEM+ +G++ D   YN+++D   K      A+   D M   G+ 
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P  +T+N LID +F+ G    A  +   M+++G      TYN++I     + + E+  RL
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           L  M  +GL+PN  TY  L D   + G   D
Sbjct: 567 LNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 164/345 (47%), Gaps = 11/345 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  VI  L   G+  +A  V E++K  G  P    YN ++ GY K G +  A+ ++ 
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM    + P+E T+++LID +       +A+ V +EM+    +PN   Y+ ++ G    G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +      +  +M   G++P+   YN +I+ F K   L  A    D +   G+ P+ IT+N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID + K GR D A  L   M + G  P  +TYN +I     +   ++ ++L   M   
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL  ++VTY  LVD             C +G + +AV     M   GL PS+L  N+LI+
Sbjct: 469 GLKADLVTYNILVDAL-----------CKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +  +     A  V   M++ G + ++VTY  L+K      K  +
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEE 562



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 178/376 (47%), Gaps = 7/376 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           + ++I+ L +  K  +A  + +  +    +P  +TYN +I    +   + KA  L+ +M 
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
               H + I ++++I    R   + ++  +K+++E++   ++ +    N +I G    G 
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAA--KKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+       G+GL P   TY A+I          EA  + +++ + GL P    +N 
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y K G + DA  + S M  +GV P+  TY+ LI  +   G  + AR + KEME + 
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +   Y+ ++     +GE ++  ++L EM   G+ P    YN +ID + +      A+
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  +G   + +T+N LI      G+ + A  L  EM E+G  P  TTY+I+ + +
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 589

Query: 521 GEQERWEDVKRLLGNM 536
            E+    D+   L N+
Sbjct: 590 MEKGFIPDIDGHLYNV 605



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 11/220 (5%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V KEM    +  +   ++V+I+   K      A    + M + G  P  IT+NT+ID + 
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+  +A+ L +EM  +   P   T+NI+I+     E     K++   M+ QGL PNVV
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY +L++    +G+ D+A+    GL D+       M   GLKP+ +  N+LIN F + + 
Sbjct: 336 TYNSLINGLCSNGKLDEAL----GLQDK-------MSGMGLKPNVVTYNALINGFCKKKM 384

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             EA  +L  + + GL P+V+T+ TL+ A  +  +    F
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 199/406 (49%), Gaps = 26/406 (6%)

Query: 248 LLQKLYKEIECDKI--------------ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           ++++L    ECDK                  G+L + +I    + G  + A R    A  
Sbjct: 202 IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFS 261

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LK 352
            G       ++A+I+A   SG   EA +VF  +KE GL+P    YNA++    K G   K
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
                  EM+R+ V PD  T++ L+   +  G WE+AR +  EM     + + F Y+ +L
Sbjct: 322 QVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLL 381

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G+    F++L +M +  + P+   Y+ +ID F K      A+  F  M    I 
Sbjct: 382 DAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIA 441

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            D +++NTL+  + K GR + A ++  EM   G      TYN ++   G+Q ++++VK++
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M+ + +LPN++TY+TL+D Y + G + +A+E            FR  ++ GL+   +
Sbjct: 502 FAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME-----------VFREFKSAGLRADVV 550

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             ++LI+A  ++     A +++  M + G+ P+VVTY +++ A  R
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 201/437 (45%), Gaps = 37/437 (8%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           +S LI A GRS   E+    F   +   L P  +TYNA+I AC +   + ++      +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +++    D I ++ ++   +R    +++  + L+ E+   +IE D    N ++    K G
Sbjct: 331 QRNCVQPDRITFNSLLAVCSRGGLWEAA--RNLFDEMSNRRIEQDVFSYNTLLDAICKGG 388

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   L       + P   +Y+ VI   + +GR  EA  +F E++   +     +YN
Sbjct: 389 QMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYN 448

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  Y K+G  ++A  ++ EM   G+  D  TY+ L+  Y   G+++  + V  EM+  
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKRE 508

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           H  PN   YS ++ GY   G ++   +V +E KS+G+  D   Y+ +ID   K   +  A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT--------- 510
           ++  D M  EGI P+ +T+N++ID   +    +R+ +        G  P +         
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADY----SNGGSLPFSSSALSELTE 624

Query: 511 TTYNIMINLLGE-------------QERWEDVKRLLGNMRAQGLL---PNVVTYTTLVDI 554
           T  N +I L G+             +E  +++  +L   R    L   PNVVT++ +++ 
Sbjct: 625 TEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684

Query: 555 YGQSGRFDDAIECLEGL 571
             +   F+DA   LE L
Sbjct: 685 CSRCNSFEDASMLLEEL 701



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 222/504 (44%), Gaps = 73/504 (14%)

Query: 165 LYSILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           L S +I  LGR      +++++E    S     T   ++ALISA  R+   E+A+++ + 
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFET-AFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++ G   + + Y+ VI +  +   ++   + K + E++ + ++                
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNCVQ---------------- 336

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                              P   T+ +++   S  G    A  +F+E+    ++    +Y
Sbjct: 337 -------------------PDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSY 377

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL    K G +  A  ++++M    ++P+  +YS +ID +A AGR++ A  +  EM  
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
            +   +   Y+ +L+ Y   G  +    +L+EM S G++ D   YN ++  +GK      
Sbjct: 438 LNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F  M  E + P+ +T++TLID + K G Y  A E+F E +  G       Y+ +I+
Sbjct: 498 VKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALID 557

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG----LSDQ 574
            L +         L+  M  +G+ PNVVTY +++D +G+S   + + +   G     S  
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSS 617

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE----------------AFAVLQYMK 618
           A++   +  T+G        N +I  FG+   +                     V + M 
Sbjct: 618 ALS--ELTETEG--------NRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMH 667

Query: 619 ENGLKPDVVTYTTLMKALIRVDKF 642
           +  +KP+VVT++ ++ A  R + F
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSF 691



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 206/476 (43%), Gaps = 71/476 (14%)

Query: 164 LLYSILIHALGRS----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           + Y+ +I A G+     +++ + F   QR  + P  +T+N+L++ C+R    E A NL  
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFD 363

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M       D  +Y+ ++ ++ +  ++D  L  ++  ++   +I  +    + VI GFAK
Sbjct: 364 EMSNRRIEQDVFSYNTLLDAICKGGQMD--LAFEILAQMPAKRIMPNVVSYSTVIDGFAK 421

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A+   G  + + ++    +Y  +++  +  GR+ EA  +  E+   G+K     
Sbjct: 422 AGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVT 481

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YNALL GY K G   + + V +EM+R  VLP+  TYS LID Y+  G ++ A  V +E +
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFK 541

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +  + +  +YS ++      G       ++ EM   G+ P+   YN +ID FG+   + 
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATME 601

Query: 458 HA---------------------------MAAFDRMLSEG-------------------- 470
            +                           +  F ++ SEG                    
Sbjct: 602 RSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKDCKEGMQELSCILE 661

Query: 471 ---------IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL- 520
                    I+P+ +T++ +++   +C  ++ A  L EE++          Y ++  LL 
Sbjct: 662 VFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLM 717

Query: 521 GEQER-WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-IECLEGLSDQ 574
           G++E  W   + L   +           Y  L D+    G+   A +  LEG S Q
Sbjct: 718 GQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQ 773



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 124/241 (51%), Gaps = 12/241 (4%)

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF-D 464
           + +S +++ Y   G  +    V   MK  G+ P+   YN +ID  GK       +A F D
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M    ++PD IT+N+L+    + G ++ A  LF+EM  R       +YN +++ + +  
Sbjct: 329 EMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGG 388

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           + +    +L  M A+ ++PNVV+Y+T++D + ++GRFD+A+           N F  MR 
Sbjct: 389 QMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEAL-----------NLFGEMRY 437

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             +    ++ N+L++ + +  R  EA  +L+ M   G+K DVVTY  L+    +  K+ +
Sbjct: 438 LNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 645 V 645
           V
Sbjct: 498 V 498



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 15/215 (6%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + MI T G+Y  +  A   F+   S G       ++ LI  + + G ++ A  +F  M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 504 RGYFPCTTTYNIMINLLGEQE-RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            G  P   TYN +I+  G+    ++ V +    M+   + P+ +T+ +L+ +  + G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGG--- 353

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                   L + A N F  M    ++    + N+L++A  +  +   AF +L  M    +
Sbjct: 354 --------LWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRI 405

Query: 623 KPDVVTYTTLMKALIRVDKFHK---VFSSYLFFNI 654
            P+VV+Y+T++    +  +F +   +F    + NI
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNI 440


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 234/515 (45%), Gaps = 29/515 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K LC   S +D A +++  + KH  C    ++Y  LIHAL  + ++ EA  L +   L
Sbjct: 211 VMKALCMV-SEVDSACSLLRDMAKHG-CVPNSVIYQTLIHALCENNRVSEALQLLEDMFL 268

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
                   T+N +I    R   + +A  L+ +M   G+  D + Y  ++  L R  ++D 
Sbjct: 269 MCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDE 328

Query: 247 S--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV-GLSPKTATY 303
           +  LL K+           +  L N +I G+  +G   +A   L     + G  P   T+
Sbjct: 329 ARALLNKIPNP--------NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTF 380

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G  + A  +  E+     +P    Y  L+ G+ K G L++A  +V+ M  
Sbjct: 381 NIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSA 440

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+  +   Y+ LI A    G  E A  +  EM     KP+ + ++ ++ G     + + 
Sbjct: 441 KGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEE 500

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +  +M   GV  +T  YN ++  F   + +  A    D ML  G   D IT+N LI 
Sbjct: 501 ALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIK 560

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G  ++   LFEEM  +G FP   + NI+I+ L    +  D  + L +M  +GL P
Sbjct: 561 ALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTY +L++             C  G   +A N F  ++++G++P  +  N+LI+    
Sbjct: 621 DIVTYNSLINGL-----------CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCH 669

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +    +A  +L    ++G  P+ VT++ L+  +++
Sbjct: 670 EGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 214/457 (46%), Gaps = 18/457 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +LS+    T  T+  ++ A     +++ A +L+  M + G   + + Y  +I +L   N+
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +L  +L +++     E D Q  NDVI G  +AG   +A + L      G S    TY
Sbjct: 256 VSEAL--QLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTY 313

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEME 362
             ++  L   G+  EA A+  ++      P T  YN L+ GYV  G  ++A + + + M 
Sbjct: 314 GYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMV 369

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G  PD +T++++ID     G   SA  +L EM     +PN   Y+ ++ G+  +G  +
Sbjct: 370 IAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLE 429

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              +++  M + G+  +T  YN +I    K   +  A+  F  M  +G +PD  T+N+LI
Sbjct: 430 EAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLI 489

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +   K  + + A  L+ +M   G    T TYN +++    ++  +   +L+  M  +G  
Sbjct: 490 NGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCP 549

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            + +TY  L+              C  G  ++ +  F  M   G+ P+ ++ N LI+   
Sbjct: 550 LDNITYNGLIKAL-----------CKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLC 598

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
              +  +A   LQ M   GL PD+VTY +L+  L ++
Sbjct: 599 RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM 635



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 218/500 (43%), Gaps = 36/500 (7%)

Query: 177 EKLYEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKM-RQDGYHCDFINYS 232
           E+L + F L Q +R   LTP++   L        D+  ++ L  +   Q GY   F    
Sbjct: 44  ERLLKPFDLKQLRRSLSLTPISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACY 103

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           L+I  L      D  +++KL K+++ + +     L   ++  + KAG   +A R L    
Sbjct: 104 LLIDKLGAVG--DFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMW 161

Query: 293 GV-GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           GV    P   +Y  V+  L +      A  VF ++   G+ P    +  ++K    +  +
Sbjct: 162 GVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEV 221

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  ++ +M + G +P+   Y  LI A     R   A  +L++M +   +P+   ++ +
Sbjct: 222 DSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDV 281

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G    G      ++L  M   G   D   Y  ++    +   +  A A  +++ +   
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN--- 338

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEEL-FEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            P+T+ +NTLI  +   GR++ A++L +  M   GY P   T+NIMI+ L ++       
Sbjct: 339 -PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            LL  M A+   PNV+TYT L++ + + GR ++A E                        
Sbjct: 398 ELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICAL 457

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C +G  ++A+  F  M   G KP     NSLIN   ++ +  EA ++   M   G+  + 
Sbjct: 458 CKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANT 517

Query: 627 VTYTTLMKALIRVDKFHKVF 646
           VTY TL+ A +  D   + F
Sbjct: 518 VTYNTLVHAFLMRDSIQQAF 537



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 168/351 (47%), Gaps = 16/351 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P +  Y  +I AL  + R  EA  + E++     +P  + +N ++ G  + G + +A
Sbjct: 235 GCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEA 294

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             ++  M   G   D  TY  L+      G+ + AR +L ++      PN+ +Y+ +++G
Sbjct: 295 AKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISG 350

Query: 415 YRDRGEWQRTFQVL-KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           Y   G ++    +L   M  +G EPD + +N+MID   K   L  A+   + M+++  EP
Sbjct: 351 YVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEP 410

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + IT+  LI+   K GR + A E+   M  +G    T  YN +I  L +    E+  +L 
Sbjct: 411 NVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLF 470

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
           G M  +G  P++ T+ +L++   ++ + ++A+           + +  M  +G+  + + 
Sbjct: 471 GEMSGKGCKPDIYTFNSLINGLCKNHKMEEAL-----------SLYHDMFLEGVIANTVT 519

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            N+L++AF       +AF ++  M   G   D +TY  L+KAL +     K
Sbjct: 520 YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 186/402 (46%), Gaps = 16/402 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH---ALGRSEK----LYEAFL 184
           L+  LC     +D A A+++ +   N      +LY+ LI    A GR E+    LY   +
Sbjct: 316 LMHGLCRM-GQVDEARALLNKIPNPN-----TVLYNTLISGYVASGRFEEAKDLLYNNMV 369

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           ++  +     T+N +I    +   L  AL L+++M    +  + I Y+++I    +  ++
Sbjct: 370 IAGYEP-DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           + +   ++   +    + L+    N +I    K G+  +A++  G   G G  P   T+ 
Sbjct: 429 EEA--AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFN 486

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           ++I  L  + +  EA +++ ++   G+   T  YN L+  ++    ++ A  +V EM   
Sbjct: 487 SLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFR 546

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G   D  TY+ LI A    G  E    + +EM      P     + +++G    G+    
Sbjct: 547 GCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDA 606

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            + L++M   G+ PD   YN +I+   K   +  A   F+++ SEGI PD IT+NTLI  
Sbjct: 607 LKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISR 666

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           H   G ++ A  L  +  + G+ P   T++I+IN + ++  W
Sbjct: 667 HCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPW 708


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 211/450 (46%), Gaps = 13/450 (2%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L+    R D +E    L   M   G   D   YS  I++  +    D++  +K+++E+
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAA--KKVFEEM 269

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                 ++    N +I G  ++G   +A  F       GLSP   TY A++  L    R 
Sbjct: 270 RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRL 329

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA+A+ +E+  SGLKP    Y  L+ G++K G   +A  ++ EM  +GV P++  Y  L
Sbjct: 330 KEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNL 389

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I      G+   A  +LKEM     +P++F Y+ ++ G+  + +    F++L EM++SG+
Sbjct: 390 IRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGI 449

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            P+ + Y +MI+   +      A    + M+SEG++P+   +  LI  H K G    A E
Sbjct: 450 LPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACE 509

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             E+M +    P    YN +I  L    R E+ +     ++ +GL+P+  TY+ L+  Y 
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 569

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++G  + A + L           R M   GLKP+      L+  + +     +  ++LQ 
Sbjct: 570 KTGNLEKADQLL-----------RQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQS 618

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           M  +G KPD   Y  +++ L R +     F
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 178/386 (46%), Gaps = 24/386 (6%)

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           +  G  +G G+ P   TY+  I A   +     A+ VFEE++          YN ++ G 
Sbjct: 229 KLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            + G +++A     EM   G+ PD  TY  L++      R + A+ +L EM  S  KPN 
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y  ++ G+   G+    F +LKEM S+GV+P+   Y+ +I    K   L  A      
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+  G+ PDT T+N L+  HF+    D A EL  EM+  G  P   +Y IMIN L +   
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------------- 569
            ++   LL  M ++GL PN   Y  L+  + + G    A E LE                
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528

Query: 570 ---GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
              GLS     ++A   +  ++  GL P     + LI+ + +     +A  +L+ M  +G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFS 647
           LKP+  TYT L++   + + + KV S
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSS 614



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 205/451 (45%), Gaps = 15/451 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+  I A  +  D + A  +  +MR+     + + Y+++I  L R+  ++ +     +K
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF---GFK 301

Query: 255 EIECD-KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           E   D  +  D      ++ G  K     +A   L      GL P    Y  ++      
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+T EA  + +E+  +G++P    Y+ L++G  K+G L  A  ++ EM + G+ PD  TY
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+  +      + A  +L EM  S   PN + Y  ++ G    GE +    +L+EM S
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++P+   Y  +I    K   +  A  A ++M    + PD   +N+LI      GR + 
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           AEE + ++Q+RG  P   TY+ +I+   +    E   +LL  M   GL PN  TYT L++
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y +S  ++     L+            M   G KP N     +I      +    AF V
Sbjct: 602 GYFKSNDYEKVSSILQS-----------MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 650

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           L  +++NGL PD+  Y++L+  L ++    K
Sbjct: 651 LTEVEKNGLVPDLHIYSSLISGLCKIADMEK 681



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 141/605 (23%), Positives = 254/605 (41%), Gaps = 104/605 (17%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNA 198
           D A  V   +++ + C   E+ Y+++I  L RS  + EAF   +      L+P   TY A
Sbjct: 260 DAAKKVFEEMRRRD-CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L++   +   L++A  L+ +M   G   + + Y  ++    +  K   +    + KE+  
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAF--DILKEMIS 376

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT---------------- 302
             ++ +  + +++I G  K G   +A + L     VGL P T T                
Sbjct: 377 AGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDG 436

Query: 303 -------------------YAAVITALSNSGRTIEAEAVFEELKESGLKPR--------- 334
                              Y  +I  L  +G + EA  + EE+   GLKP          
Sbjct: 437 AFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLII 496

Query: 335 ------------------TKA--------YNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                             TKA        YN+L+KG   +G +++AE   +++++ G++P
Sbjct: 497 GHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVP 556

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           DE TYS LI  Y   G  E A  +L++M  S  KPN+  Y+ +L GY    ++++   +L
Sbjct: 557 DEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL 616

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           + M  SG +PD H Y ++I    +   +  A      +   G+ PD   +++LI    K 
Sbjct: 617 QSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKI 676

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              ++A  L +EM + G  P    YN +I+           + +  ++ A+GL+PN VTY
Sbjct: 677 ADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTY 736

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVN----AFRVMRTDGLKPSNLA----------- 593
           T L+D   ++G   DA +  + + D+ +      + V+ T     ++L            
Sbjct: 737 TALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFN 796

Query: 594 --------LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF--- 642
                    N+L++ F +  +  E   +L  M +  + P+  T   ++    +  K    
Sbjct: 797 RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEA 856

Query: 643 HKVFS 647
           H+VF+
Sbjct: 857 HRVFA 861



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 170/388 (43%), Gaps = 46/388 (11%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP TA    ++     +G    A  V   + + GL P  +  N LLK  ++   ++    
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--------EVSH-------- 400
           +   ME +G+LPD +TYS  I+A+  A  +++A+ V +EM        EV++        
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 401 -------------------AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                                P++F Y  ++ G       +    +L EM  SG++P+  
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  ++D F K      A      M+S G++P+ I ++ LI    K G+  RA +L +EM
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            + G  P T TYN ++    +Q   +    LL  MR  G+LPNV +Y  +++   Q+G  
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE- 468

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                     S +A N    M ++GLKP+      LI    ++   + A   L+ M +  
Sbjct: 469 ----------SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + PD+  Y +L+K L  V +  +    Y
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYY 546



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 191/430 (44%), Gaps = 24/430 (5%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y +  ++N L +N  S+ A          N +E  ++E  +  P    ++ L    S   
Sbjct: 454 YSYGIMINGLCQNGESKEAG---------NLLEEMISEGLK--PNAFMYAPLIIGHSKEG 502

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTY 196
           +I LA   +  + K N+ +     Y+ LI  L   GR E+  E +   Q++ L P   TY
Sbjct: 503 NISLACEALEKMTKANV-HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTY 561

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYK 254
           + LI    +  +LEKA  L+ +M   G   +   Y+ +++   ++N  +  SS+LQ +  
Sbjct: 562 SGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG 621

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
             +    + D  +   VI   +++ +   A   L   +  GL P    Y+++I+ L    
Sbjct: 622 SGD----KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A  + +E+ + GL+P    YNAL+ G+ + G +  A  V   +   G++P+  TY+
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID     G    A  + KEM      P++F+Y+ +  G  D  + ++   + +EM + 
Sbjct: 738 ALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNR 797

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G   +   +N ++  F K   L         M+   I P+  T   ++    K G+   A
Sbjct: 798 GYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEA 856

Query: 495 EELFEEMQER 504
             +F E+Q++
Sbjct: 857 HRVFAELQQK 866



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 58/312 (18%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P    ++ L  +   A  +  A  +L +M ++H  P   + S            QR  Q 
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLAS-----------IQRAIQD 161

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA-----------MAAFDR----------- 465
             + +S    P T   +V++DT+ K   + +A           +A   R           
Sbjct: 162 -TDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLR 220

Query: 466 -------------MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                        M   GI PD  T++T I+ H K   +D A+++FEEM+ R       T
Sbjct: 221 ADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVT 280

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN+MI+ L      E+       M   GL P+  TY  L++   +  R  +A    + L 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEA----KALL 336

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+       M   GLKP+ +   +L++ F ++ + AEAF +L+ M   G++P+ + Y  L
Sbjct: 337 DE-------MSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNL 389

Query: 633 MKALIRVDKFHK 644
           ++ L ++ +  +
Sbjct: 390 IRGLCKIGQLGR 401



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)

Query: 165 LYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y I+I  L RSE +  AF++    ++  L P    Y++LIS   +  D+EKA+ L+ +M
Sbjct: 630 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM 689

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            ++G     + Y+ +I    R+  I  S  + ++  I    +  +      +I G  K G
Sbjct: 690 AKEGLEPGIVCYNALIDGFCRSGDI--SRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D + A          G++P    Y  + T  S++    +A  + EE+   G       +N
Sbjct: 748 DITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFN 806

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+ K G L++ E ++  M    ++P+  T   ++  +  AG+   A  V  E++  
Sbjct: 807 TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866

Query: 400 HA 401
            A
Sbjct: 867 KA 868


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 226/481 (46%), Gaps = 18/481 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +S+L + C  N +I+ A+   S ++   +  S   L SIL   L + +    AF
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL-KCQSWQNAF 235

Query: 184 LLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +      + L    T+N L+S   +   + +A NL  ++   G   + ++Y+ +I    
Sbjct: 236 TMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R + I+++   K+YKE+  +    +      ++ G+ K GD   A       +   + P 
Sbjct: 296 RKDNINAAC--KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 353

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T   +I  L  +GR+ E   +F +    G  P    YN ++ G++K G +  A  V  
Sbjct: 354 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 413

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G+ P   TY+ LID +      + A  +L +M+    K +   Y  ++ G+  R 
Sbjct: 414 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   ++L E++ +G+ P+   YN MI  F   N +  A+  + +M++EGI  D  T+ 
Sbjct: 474 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 533

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LID   K GR   A ++  EM  +G  P    + ++IN L  + ++E+ +++L +M  +
Sbjct: 534 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 593

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            ++P+V+ Y TL+  + + G   +A      L D+       M   GL P N+  + L+N
Sbjct: 594 NMIPSVLIYNTLIAGHFKEGNLQEAFR----LHDE-------MLDRGLVPDNITYDILVN 642

Query: 600 A 600
            
Sbjct: 643 G 643



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 202/476 (42%), Gaps = 47/476 (9%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L++A  R +   +A  L +KM   G   D     +++++  +   I  +  ++ + + 
Sbjct: 9   NILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEA--EQHFLQA 66

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   +ELD +  +  +       ++  A+  L   +  G  P   T+ +VITA    G  
Sbjct: 67  KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 126

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  + +++   G         +L+KGY   G L+ A  +V+E+  SG++P++ TYS+L
Sbjct: 127 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 186

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK------- 429
           ID     G  E A     EM+    + + +  + IL GY     WQ  F +         
Sbjct: 187 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246

Query: 430 ---------------------------EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
                                      E+ + G+ P+   YN +I    + + ++ A   
Sbjct: 247 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 306

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           +  ML  G  P+ +T+  L+D +FK G  + A  +F  M++    P  TT  I+I  L +
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
             R  + + L     +QG +P  + Y T++D + + G  +            A N +R M
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN-----------LASNVYREM 415

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              G+ PS +   SLI+ F +      A  +L  MK  GLK D+  Y TL+    +
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 471



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 204/478 (42%), Gaps = 19/478 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YSI +H L        A  L +  R         T+ ++I+AC +  ++ +AL L   M 
Sbjct: 78  YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 137

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +    + +++       + S+L+  L  EI    +  +    + +I G  K G+
Sbjct: 138 NCGKSMNLAVATSLMKGYCMQGNLRSALV--LVNEISESGLVPNKVTYSVLIDGCCKNGN 195

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA  F    +  G+     +  +++           A  +F +  ESGL      +N 
Sbjct: 196 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNT 254

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G + +A  +  E+   G+ P+  +Y+ +I  +       +A  V KEM  + 
Sbjct: 255 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 314

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  ++ ++ GY  +G+ +  F +   MK + + P      ++I    K        
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 374

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F++ +S+G  P  + +NT+ID   K G  + A  ++ EM E G  P T TY  +I+  
Sbjct: 375 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +    +   +LL +M+ +GL  ++  Y TL+D + +      A E L  L         
Sbjct: 435 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL--------- 485

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             R  GL P+    NS+I  F       EA  + + M   G+  D+ TYT+L+  L++
Sbjct: 486 --RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 541



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 7/327 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++IL+    +   +  AF +  R +      T  T   +I    +     +  +L +K  
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 381

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+    + Y+ +I    +   I+  L   +Y+E+    I         +I GF K  +
Sbjct: 382 SQGFVPTCMPYNTIIDGFIKEGNIN--LASNVYREMCEVGITPSTVTYTSLIDGFCKGNN 439

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++ L   +  GL      Y  +I           A  +  EL+ +GL P    YN+
Sbjct: 440 IDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNS 499

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+  M  +++A  +  +M   G+  D  TY+ LID    +GR   A  +  EM    
Sbjct: 500 MITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKG 559

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++ G  ++G+++   ++L++M    + P    YN +I    K   L  A 
Sbjct: 560 ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAF 619

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFK 487
              D ML  G+ PD IT++ L++  FK
Sbjct: 620 RLHDEMLDRGLVPDNITYDILVNGKFK 646


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 164/647 (25%), Positives = 274/647 (42%), Gaps = 104/647 (16%)

Query: 95  SNSESASAL-------ASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAY 147
           S+S SA+ L       A+SP+   R+   L+ S    P P   S L  L + + + D   
Sbjct: 2   SSSPSAANLLALLRRNAASPAVALRLFLHLS-SAACPPPPRSTSFLARLVAEHPAAD--- 57

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT---------YNA 198
           A++  L +H L  S+      L+  L  S+ L     +   + L  LT         YN 
Sbjct: 58  ALLPLLHRHIL--SFPDPSPHLLALLSCSDVLPLRLAIPAFRSLRALTSAPPPTTPVYNR 115

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY----- 253
           LI A  R   L+    L   +   G   D    +L++Q+L    +++  L Q+++     
Sbjct: 116 LILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRME--LAQRVFDAMPA 173

Query: 254 -----------------KEIECDKIELDGQ------LLNDVIVGFAKAGDASKAMRFLGM 290
                            + I+  K+ LDG       + N V+ GF K G   +A R +  
Sbjct: 174 RNEFSFGILARGYCRAGRSIDALKV-LDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVER 232

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES---GL-KPRTKAYNALLKGYV 346
            +  GL+P   T+ A I+AL  +GR ++A  +F++++E    GL +P    ++ +L G+ 
Sbjct: 233 MRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFC 292

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G++ +A  +V  M   G L    +Y+  +      GR   A+ +L+EM     +PNS+
Sbjct: 293 DAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSY 352

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ I++G    G+     +V   ++S  + PD   Y  ++  +     +  A    D M
Sbjct: 353 TYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEM 412

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER- 525
             +G  P++ T+N L+   ++ GR   AE L E M E+GY   T   NI+I+ L    R 
Sbjct: 413 AQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRL 472

Query: 526 ----------WEDVKRLLGNMR------------AQGLLPNVVTYTTLVDIYGQSGRFDD 563
                     WE+    LG +             +Q  LP+ +TY+ L+    + GRFD+
Sbjct: 473 DVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDE 532

Query: 564 AIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A +                        C  G +  A+   R M   G  PS    N LI 
Sbjct: 533 AKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            F E  +  E   ++  MKE G+ P+V+TY +L+K+  +    +K  
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 223/502 (44%), Gaps = 73/502 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           LL+ LC +   ++LA  V   +   N     E  + IL     R+ +  +A  +L     
Sbjct: 151 LLQALCDAGR-MELAQRVFDAMPARN-----EFSFGILARGYCRAGRSIDALKVLDGMPS 204

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           +  +  N +++   +   +E+A  L+ +MR  G   + + ++  I +L +  ++  +   
Sbjct: 205 MNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAY-- 262

Query: 251 KLYKEIECD---KIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +++++++ D    +    Q+  DV++ GF  AG   +A   + + +  G   +  +Y   
Sbjct: 263 RIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRW 322

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           ++ L  +GR  EA+ +  E+   G++P +  YN ++ G  K G   DA  V     RSGV
Sbjct: 323 LSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGV 381

Query: 367 L-PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  TY+ L+ AY + G   +A  +L EM      PNSF Y+ +L      G      
Sbjct: 382 MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAE 441

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM------------------- 466
           ++L+ M   G   DT   N++ID   + + L  AM   D M                   
Sbjct: 442 RLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVV 501

Query: 467 ----LSEGIEPDTITWNTLIDCHFKCGRYDRAEE-------------------------- 496
               +S+   PD IT++ LI    K GR+D A++                          
Sbjct: 502 SDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCK 561

Query: 497 ---------LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
                    +  +M+++G  P T TYN++I    E+ + E++ +L+  M+ +G+ PNV+T
Sbjct: 562 HGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMT 621

Query: 548 YTTLVDIYGQSGRFDDAIECLE 569
           Y +L+  + Q G  + A+  L+
Sbjct: 622 YNSLIKSFCQQGMVNKAMPLLD 643



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 34/420 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQ---KHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++ +  LC +   +D AY +   +Q   +H L    ++ + +++     +  + EA +L
Sbjct: 245 FNARISALCKAGRVLD-AYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL 303

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
               R         +YN  +S   RN  + +A  L+ +M  +G   +   Y++++  L +
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCK 363

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             K   +  +++   I    +  D      ++  +   G+ + A R L      G +P +
Sbjct: 364 EGKAFDA--RRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNS 421

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  ++ +L  +GRT EAE + E + E G    T   N ++ G  +   L  A  +V  
Sbjct: 422 FTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDG 481

Query: 361 MERSG-----------------------VLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           M   G                        LPD+ TYS+LI A    GR++ A+  L EM 
Sbjct: 482 MWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMI 541

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+S IY   + GY   G+     +VL++M+  G  P T  YN++I  F + +   
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             M     M  +GI P+ +T+N+LI    + G  ++A  L +EM +    P  T+++++I
Sbjct: 602 EIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLI 661



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/432 (21%), Positives = 176/432 (40%), Gaps = 62/432 (14%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I++  L +  K ++A     F+ S       +TY +L+ A     ++  A  ++ +M 
Sbjct: 354 YNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMA 413

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKE------IECDKIELDGQLLN--- 269
           Q G   +   Y++++QSL R  +   +  LL+++ ++        C+ I +DG   N   
Sbjct: 414 QKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNII-IDGLCRNSRL 472

Query: 270 ----DVIVGFAKAGDASKAM---RFLGMAQGVGLS----PKTATYAAVITALSNSGRTIE 318
               D++ G  + G  +       FL +     +S    P   TY+ +I+AL   GR  E
Sbjct: 473 DVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDE 532

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A+    E+    + P +  Y+  + GY K G    A  V+ +ME+ G  P   TY+LLI 
Sbjct: 533 AKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIR 592

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +    + E    ++ EM+     PN   Y+ ++  +  +G   +   +L EM  + + P
Sbjct: 593 GFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVP 652

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRML--------------------SEGIEPDTI-- 476
           +   ++++I  + K      A   FD  L                     + IE   I  
Sbjct: 653 NITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILE 712

Query: 477 ------------TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                        +  +I    + G  D A  L + +  + +      +  +I+ LG++ 
Sbjct: 713 MALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRG 772

Query: 525 RWEDVKRLLGNM 536
           + +DV  L   M
Sbjct: 773 KKQDVDMLSAKM 784


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 203/446 (45%), Gaps = 17/446 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N LI++    + L  A +++  + + GY      ++ +I+ L    KI  +L  +L+ 
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEAL--QLFD 148

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  +  + D      +I G  K G+ S A+RFL   +     P    Y+ +I +L    
Sbjct: 149 KMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA ++F ++   G+ P    Y++L+ G   +G+ K+A  +   M    ++PD+ T++
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+DA    G    A  V+  M  S  KP+   Y+ ++ G+  R E  +T  V   M   
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYD 492
           G  P    Y  +I+ + K   +  AM  F+ M  +G+ PDT+T+NTLI   CH   GR  
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV--GRLR 386

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  LF EM   G  P   TY I+ + L +  R  +   LL  +    L P++  Y+ ++
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D   ++G  + A +    LS +           GL P       +IN   +    AEA  
Sbjct: 447 DGMCRAGELEAARDLFSKLSSK-----------GLHPDVRTYTIMINGLCQQGLLAEASK 495

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
           +   M ENG  P+  TY  + +  +R
Sbjct: 496 LFGEMDENGCSPNACTYNLITRGFLR 521



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 13/432 (3%)

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
           + ++ AL+L ++M +       +++S ++ S+TR     + L   LYK+++   I  +  
Sbjct: 33  NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVL--SLYKQMDSFGIPHNTY 90

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN +I  F        A   LG    +G  P TAT+  +I  L   G+  EA  +F+++
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              G +P    Y  L+ G  K+G    A   +  ME+    P    YS +ID+     + 
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +  +M      PN+F YS ++ G    G W+   ++   M    + PD   +N +
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +D   K   +  A    D M+   ++PD +T+N+L+D H       +   +F+ M  +G 
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   +Y  +IN   + +  +    L   M  QGL+P+ VTY TL+      GR  DAI 
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                       F  M   G  P  +    L +   ++ R AEA  +L+ ++   L PD+
Sbjct: 391 -----------LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 627 VTYTTLMKALIR 638
             Y+ +M  + R
Sbjct: 440 HIYSIVMDGMCR 451



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 174/410 (42%), Gaps = 42/410 (10%)

Query: 164 LLYSILIHALGRSEKLYEA--FLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSK 218
           L Y  LI+ L +      A  FL S  QR    T + Y+ +I +  ++  L +AL+L S 
Sbjct: 160 LTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSD 219

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   +   YS +I  L        ++  +L+  +   KI  D    N ++    K 
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAI--RLFYAMIHRKIMPDQLTFNTLVDALCKE 277

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITA---LSNSGRTI------------------ 317
           G   KA   + +     L P   TY +++      S  G+T+                  
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISY 337

Query: 318 --------------EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
                         +A  +FEE+ + GL P T  YN L+ G   +G L+DA  +  EM  
Sbjct: 338 TTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 397

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PD  TY +L D      R   A ++LK +E ++  P+  IYS ++ G    GE + 
Sbjct: 398 YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEA 457

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +  ++ S G+ PD   Y +MI+   +   L  A   F  M   G  P+  T+N +  
Sbjct: 458 ARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITR 517

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
              +     RA +LF+EM  RG+    +T  +++ +L +    + VK++L
Sbjct: 518 GFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    ++ ++T+++         ++++++   G+   T   N L+  +  +  L  A  V
Sbjct: 52  PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + ++ + G  P   T++ LI      G+   A  +  +M     +P+   Y  ++ G   
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      + L+ M+     P    Y+ +ID+  K   L  A++ F  ML++GI P+  T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +++LI      G +  A  LF  M  R   P   T+N +++ L ++        ++  M 
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
              L P+VVTY +L+D +           CL     + VN F  M   G  PS ++  +L
Sbjct: 292 QSDLKPDVVTYNSLMDGH-----------CLRSEMGKTVNVFDTMVRKGCVPSVISYTTL 340

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + + Q   +A  + + M + GL PD VTY TL+  L  V +     + +
Sbjct: 341 INGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 24/278 (8%)

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           N    + A  +   M      P+   +S++L        +     + K+M S G+  +T+
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N++I++F   N L  A +    +L  G +P T T+ TLI      G+   A +LF++M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G+ P   TY  +IN L +        R L +M  +   P VV Y+T++D   +  + 
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +A+                         C+ G   +A+  F  M    + P  L  N+L
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           ++A  ++    +A  V+  M ++ LKPDVVTY +LM  
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDG 308



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 7/242 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKAL 213
           C    + Y+ LI+   + + + +A  L +   +Q L P  +TYN LI        L  A+
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L  +M   G   D + Y ++   L + +++  +++  L K IE   ++ D  + + V+ 
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV--LLKVIEGTNLDPDIHIYSIVMD 447

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  +AG+   A          GL P   TY  +I  L   G   EA  +F E+ E+G  P
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN + +G+++      A  +  EM   G   D  T +LL++  ++ G  +S + +L
Sbjct: 508 NACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567

Query: 394 KE 395
            E
Sbjct: 568 CE 569


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 230/482 (47%), Gaps = 25/482 (5%)

Query: 166 YSILIHALGRSEKLYEAFL-LSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           ++ L+ A+ +  + Y+  + LS++  L  L     T +  ++   +   ++   ++++K+
Sbjct: 95  FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV 154

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G     + ++ +I  L +  +   ++  +L+ ++     + D    N +I G  K G
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAV--ELFDDMVAKGCQPDVYTYNTIINGLCKIG 212

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + + A   L   +  G  P   TY+ +I +L       EA  +F  +K  G+ P    Y 
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYT 272

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G  K    K+A  +++EM    ++PD  T+++L+D +   G+   A  VLK M   
Sbjct: 273 SLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM 332

Query: 400 HAKPNSFIYSRILAGYR---DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +PN   YS ++ GY    D  E ++ F V   M + G +P+   YN++I+ + K   +
Sbjct: 333 GVEPNVVTYSSLMYGYSLWTDVVEARKLFHV---MITKGCKPNIFSYNILINGYCKAKRI 389

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  F+ M+ +G+ P+ +++NTLI    + G+   A++LF  M   G  P   TY+I+
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           ++   +Q       RL   M++  L PN+V YT LV    +SG   DA +          
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK---------- 499

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  +   GL+P      ++IN   ++    EA    + M+ +G  PD ++Y  +++ L
Sbjct: 500 -LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558

Query: 637 IR 638
           ++
Sbjct: 559 LQ 560



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 165/357 (46%), Gaps = 19/357 (5%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VGLSP   T +  +       R     +V  ++ + GL+P    +  L+ G  K+G    
Sbjct: 122 VGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQ 181

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +  +M   G  PD +TY+ +I+     G   +A  +LK+ME +  +PN   YS ++ 
Sbjct: 182 AVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLID 241

Query: 414 GY-RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
              RDR        +   MK+ G+ PD   Y  +I    K++    A A  + M S  I 
Sbjct: 242 SLCRDR-LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV--- 529
           PD +T+N L+D   K G+   A  + + M E G  P   TY+   +L+     W DV   
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS---SLMYGYSLWTDVVEA 357

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           ++L   M  +G  PN+ +Y  L++ Y ++ R D+A++            F  M   GL P
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ-----------LFNEMIHQGLTP 406

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +N++ N+LI+ F +  +  EA  + + M  NG  PD+ TY+ L+    +     K F
Sbjct: 407 NNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 26/360 (7%)

Query: 311 SNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS-EMERSGVLP 368
           S+S R I+ A A F  +      P    +  LL   VKMG   D    +S +ME  G+ P
Sbjct: 67  SSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSP 126

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           + +T S+ ++ +    R +    VL ++     +P    ++ ++ G    GE+ +  ++ 
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M + G +PD + YN +I+   K      A     +M   G +P+ +T++TLID   + 
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
              + A ++F  M+ +G  P   TY  +I  L +  RW++   LL  M +  ++P++VT+
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FRVMRT 584
             LVD + + G+  +A+  L+ +++  V                          F VM T
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G KP+  + N LIN + + +R  EA  +   M   GL P+ V+Y TL+    ++ K  +
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 120/531 (22%), Positives = 225/531 (42%), Gaps = 52/531 (9%)

Query: 59  SKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNR---VEF 115
             +ND      + DD L+         PL   +         + L S+   + +   V  
Sbjct: 61  QHKNDASSSFRNIDDALASFNHMLHRKPLPCII-------QFAKLLSAIVKMGQYYDVVI 113

Query: 116 KLAESYRAV---PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
            L++    V   P     S+  N       +DL ++V++ + K  L     + ++ LI+ 
Sbjct: 114 SLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGL-QPTIVTFTTLING 172

Query: 173 LGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L +  +  +A      ++++  +    TYN +I+   +  +   A  L+ KM + G   +
Sbjct: 173 LCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPN 232

Query: 228 FINYSLVIQSLTRTNKID---------------------SSLLQKLYK------------ 254
            + YS +I SL R   ++                     +SL+Q L K            
Sbjct: 233 MVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    I  D    N ++  F K G  S+A+  L     +G+ P   TY++++   S   
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +EA  +F  +   G KP   +YN L+ GY K   + +A  + +EM   G+ P+  +Y+
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYN 412

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI  +   G+   A+ + + M  +   P+ F YS +L G+  +G   + F++ + M+S+
Sbjct: 413 TLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQST 472

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            ++P+   Y +++    K      A   F  +  +G++P    + T+I+   K G  D A
Sbjct: 473 YLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            E F  M+  G  P   +YN++I  L + +       L+G MR +G + +V
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 205/469 (43%), Gaps = 41/469 (8%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR + +++ +  ++++      +TY  LI  C R  D  KA  L  +M +       + Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I+ L   ++I  +  + +++ +    +  +    N ++ G+ K     KA+      
Sbjct: 232 TILIRGLCGESRISEA--ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
            G GL P   T+  +I  L  +   + A     ++   G+ P    YN L+ GY K G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  + SE+E+  +LPD  TYS+LI       R E A  +L+EM+     PN+  Y+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G  ++  +V  +M   G+EP+   ++ +ID + K   +  AM  +  M+ +G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD + +  LID HFK G    A  L +EMQE G  P                       
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP----------------------- 506

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG--LKP 589
                       NV T + L+D   + GR  DAI+     +       +    D     P
Sbjct: 507 ------------NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +++   +LI     D R  +A      M+ +GL+PDV T   +++   R
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 179/385 (46%), Gaps = 11/385 (2%)

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           Q  N V+ G  K G      +  G     G SP   TY  +I      G  ++A  +F+E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P    Y  L++G      + +AE +   M  SG+LP+ +TY+ ++D Y     
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  + +EM      PN   +  ++ G     E     + L +M S GV P+   YN 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID + K   L  A++    +    I PD  T++ LI       R + A+ L +EM+++G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TYN +I+   ++   E    +   M  +G+ PN++T++TL+D Y ++G+ + A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               GL  + V         GL P  +A  +LI+   +D    EAF + + M+E GL P+
Sbjct: 459 ----GLYTEMV-------IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYL 650
           V T + L+  L +  +       +L
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 201/436 (46%), Gaps = 26/436 (5%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ILI  L    ++ EA   F   +   + P   TYN ++    +   ++KAL L  +
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  DG   + + + ++I  L +T+++ S+  +K   ++    +  +  + N +I G+ KA
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSA--RKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ S+A+      +   + P   TY+ +I  L    R  EA+ + +E+K+ G  P    Y
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY K G ++ A  V S+M   G+ P+  T+S LID Y  AG+ E+A  +  EM +
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ ++ G+   G  +  F++ KEM+ +G+ P+    + +ID   K   +  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 459 AMAAF----------------DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           A+  F                DR L     P+ + +  LI      GR  +A + F +M+
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCS---PNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   T  ++I          DV  L  ++   G++PN   Y  L   Y +SG   
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 563 DAIECLEGLSDQAVNA 578
            A+ C E LS   +  
Sbjct: 644 SALRCSEDLSGIGIGC 659



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 36/381 (9%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL----------YSILIHALGRSEKLY 180
            +L NL + N+ +D  Y  ++ ++K    Y  E+L          + ILI  L +++++ 
Sbjct: 258 GMLPNLYTYNTMMD-GYCKIAHVKKALELYQ-EMLGDGLLPNVVTFGILIDGLCKTDEMV 315

Query: 181 EA--FLLSQRQ-RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            A  FL+      + P    YN LI    +  +L +AL+L S++ +     D   YS++I
Sbjct: 316 SARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILI 375

Query: 236 QSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           + L   ++++ +  LLQ++ K+        +    N +I G+ K G+  KA+        
Sbjct: 376 KGLCGVDRMEEADGLLQEMKKK----GFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   T++ +I     +G+   A  ++ E+   GL P   AY AL+ G+ K G  K+
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKE 491

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-RIVL------------KEMEVSH 400
           A  +  EM+ +G+ P+  T S LID     GR   A ++ L             E++ S 
Sbjct: 492 AFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSL 551

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN  +Y+ ++ G    G   +  +   +M+ SG+ PD     V+I    +   L   M
Sbjct: 552 CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVM 611

Query: 461 AAFDRMLSEGIEPDTITWNTL 481
                +L  GI P++  +  L
Sbjct: 612 MLQADILKMGIIPNSSVYRVL 632



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 23/336 (6%)

Query: 120 SYRAVPAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           S+  VP   +++ L+   C + + +  A ++ S ++KH +       YSILI  L   ++
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGN-LSEALSLHSEIEKHEILPDV-FTYSILIKGLCGVDR 383

Query: 179 LYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           + EA  L Q   ++   P  +TYN LI    +  ++EKA+ + S+M + G   + I +S 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I    +  K+++++   LY E+    +  D      +I G  K G+  +A R     Q 
Sbjct: 444 LIDGYCKAGKMEAAM--GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVF-------------EELKESGLKPRTKAYNA 340
            GL P   T + +I  L   GR  +A  +F              EL  S   P    Y A
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++G    G +  A    S+M  SG+ PD  T  ++I  +  A       ++  ++    
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
             PNS +Y  +  GY + G  +   +  +++   G+
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 237/529 (44%), Gaps = 28/529 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQR 188
           L+  LC     I+    +   +Q+   C    + YS LI  L    ++ EA   F+  Q+
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQRG--CILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQD----GYHCD--FINYSLVIQSLTR 240
               P  +TY  L+    +  ++  AL L  +M  D    G  C    I+YS++I  L +
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             + D +  ++L++E++   I  D      +I GF  +G   KA         VG+ P  
Sbjct: 471 DRREDEA--RELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T + +I  L   G+ IEA  + E + + G          L+KG      +  A  +  +
Sbjct: 529 TTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLK 588

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS------HAKPNSFIYSRILAG 414
           M++ G +P+  T + L+     +G  + A  + K M         + KPN+  YS I+ G
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G      ++ KEMK+ GV PD   Y  +I  F +      A   F+ M+  G++PD
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T++ LID   K G+   A EL E M +RG  P T TY  ++  L   +R  +  +L  
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG-LSDQAVNAFRVMRTDGLKPSNLA 593
            M+  G LP+VVTY TL+    Q+G    A+E  +  LSD              KP  ++
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG------TNFKPDVIS 822

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            + +I+   +  R+ EA  + + MK  G+ P+V++YT+L+    R  K 
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 50/491 (10%)

Query: 167 SILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S+LI  L +  K+ EA      ++ +   L  +TY+ LI        + +A  L   M++
Sbjct: 58  SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D I Y  +++ L +T  I+ +L             +L  ++LND           
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIAL-------------QLHQEMLND----------- 153

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
               R+     G+   P   +Y+ +I  L    R  EA  +F+E+K  G+ P   +Y +L
Sbjct: 154 --TGRY-----GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSL 206

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G+   G  + A+ + +EM   G+ PD  T  +LID +   G+   A  +L+ M     
Sbjct: 207 IHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGC 266

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
             +   YS ++ G   +       Q+   MK  G  PD   Y  ++    +   ++ A+ 
Sbjct: 267 ILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALH 326

Query: 462 AFDRMLSE-------GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
               ML++        I PD  T + LID   K G+   A EL E M +RG      TY+
Sbjct: 327 LHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYS 386

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-LEGLSD 573
            +I  L  + R  +   L  +M+  G  P+ +TY TL+    Q+G  + A++   E L+D
Sbjct: 387 TLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLND 446

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                 +       KP+ ++ + +I+   +D+R+ EA  + + MK  G+ PDV++YTTL+
Sbjct: 447 TGRYGIKC------KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500

Query: 634 KALIRVDKFHK 644
                  K+ K
Sbjct: 501 HGFCLSGKWEK 511



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/553 (24%), Positives = 244/553 (44%), Gaps = 80/553 (14%)

Query: 167 SILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
            +LI    +  K+ EA      ++ +   L  +TY+ LI        + +A  L   M++
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE---------IECDKIELD-GQLLNDV 271
            G   D I Y  +++ L +T KI+ +L   L++E         I+C + ++    +L D+
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIAL--HLHQEMLNDTSQYGIKCIRPDVTTSSMLIDI 356

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           +    K G   +A   L +    G      TY+ +I  L    R  EA  +F  +++ G 
Sbjct: 357 L---CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 413

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEM----ERSGVL--PDEHTYSLLIDAYANAGR 385
           +P    Y  L+KG  + G +  A  +  EM     R G+   P   +YS++ID      R
Sbjct: 414 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 473

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + AR + +EM+     P+   Y+ ++ G+   G+W++   +  EM   G++PD    +V
Sbjct: 474 EDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 533

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID   K   +  A    + ++  G   D +T  TL+       R  +A +LF +MQ+ G
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593

Query: 506 YFP----CTT-------------------------------------TYNIMINLLGEQE 524
             P    C T                                     +Y+I+I+ L +  
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R ++ + L   M+A G++P+V++YT+L+  + +SG++ DA              F  M  
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA-----------KYLFNEMVD 702

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G++P     + LI+   ++ +  EA  +L+ M + G  P+ VTYTTL+K L   D+  +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762

Query: 645 VFSSYLFFNIYKM 657
             ++ LF  + K+
Sbjct: 763 --ATQLFMKMQKL 773



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 214/496 (43%), Gaps = 58/496 (11%)

Query: 126 APLWHSLLKNLCSS---NSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALG---RSEK 178
           A  + +L+K LC +   N ++ L   +++   ++ + C    + YSI+I  L    R ++
Sbjct: 417 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 476

Query: 179 LYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             E F   + Q + P  ++Y  LI     +   EKA  L ++M   G   D    S++I 
Sbjct: 477 ARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 536

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-------- 288
            L +  K+  +   KL + +      LD      ++ G       SKA +          
Sbjct: 537 MLCKKGKVIEA--NKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594

Query: 289 ------------GMAQ---------------------GVGLSPKTATYAAVITALSNSGR 315
                       G+ Q                     G+   P   +Y+ +I  L   GR
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +F+E+K  G+ P   +Y +L+ G+ + G  KDA+++ +EM   GV PD  T+S+
Sbjct: 655 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 714

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID     G+   A  +L+ M      PN+  Y+ ++ G           Q+  +M+  G
Sbjct: 715 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLG 774

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE------GIEPDTITWNTLIDCHFKCG 489
             PD   Y  ++    +   +  A+    +MLS+        +PD I+++ +ID   K G
Sbjct: 775 CLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A ELF+EM+  G  P   +Y  +I+      + ED K L   M  QG+  N VTY+
Sbjct: 835 REDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYS 894

Query: 550 TLVDIYGQSGRFDDAI 565
            ++  + + G+ D A+
Sbjct: 895 VMIHGFCKEGQIDKAL 910



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 169/370 (45%), Gaps = 16/370 (4%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   T + +I  L   G+ IEA  + E + + G       Y+ L+KG      + +A 
Sbjct: 50  IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS------HAKPNSFIYS 409
           ++   M++ G  PD  TY  L+      G    A  + +EM           KP    YS
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169

Query: 410 RILAGY-RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
            I+ G  +DR E     ++ KEMK+ G+ PD   Y  +I  F        A   F+ ML 
Sbjct: 170 IIIDGLCKDRRE-DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            GI+PD  T   LID   K G+   A EL E M  RG      TY+ +I  L  + R  +
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-LEGLSDQAVNAFRVMRTDGL 587
             +L  +M+  G  P+ + Y TL+    Q+G+ + A+    E L+D +    + +R D  
Sbjct: 289 ATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVT 348

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             S      LI+   ++ +  EA  +L+ M + G   D+VTY+TL+K L    +  +  +
Sbjct: 349 TSS-----MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE--A 401

Query: 648 SYLFFNIYKM 657
           ++LF ++ K+
Sbjct: 402 TWLFMSMQKL 411



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 145/333 (43%), Gaps = 26/333 (7%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY---------SLL 376
           ++ +GL P +  +N L+     +  + +    ++ + R G +PD  TY         S+L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ID     G+   A  +L+ M       +   YS ++ G            +   M+  G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE----GI--EPDTITWNTLIDCHFKCGR 490
            PD   Y  ++    +   ++ A+     ML++    GI  +P  I+++ +ID   K  R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A ELF+EM+ +G  P   +Y  +I+      +WE  K L   M   G+ P+V T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D++ + G+  +A E LE           VM   G     +  ++LI       R +EA
Sbjct: 241 LIDMFCKEGKVIEANELLE-----------VMVHRGCILDIVTYSTLIKGLCMKHRISEA 289

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             +   MK+ G +PD + Y TLMK L +  K +
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKIN 322



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 19/245 (7%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG---------IEPDTITWNTL 481
           M+ +G+ PD+  +N++I+       ++  +AA   ++  G         I PD  T + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K G+   A EL E M +RG      TY+ +I  L  + R  +   L  +M+  G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIEC-LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            P+ +TY TL+    Q+G  + A++   E L+D      +       KP+ ++ + +I+ 
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC------KPTLISYSIIIDG 174

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK---VFSSYLFFNIYKM 657
             +D+R+ EA  + + MK  G+ PDV++YT+L+       K+ K   +F+  L   I   
Sbjct: 175 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPD 234

Query: 658 LSYSG 662
           ++ SG
Sbjct: 235 VTTSG 239



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 80/338 (23%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  +G+ PD  T+++LI+   N  R       +                   AG   RG 
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAM-------------------AGIMRRG- 40

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                  + ++ +  + PD    +++ID   K   +  A    + M+  G   D +T++T
Sbjct: 41  ------YIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFP------------CTT----------------- 511
           LI       R   A  LF  MQ+ G  P            C T                 
Sbjct: 95  LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154

Query: 512 ------------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
                       +Y+I+I+ L +  R ++ + L   M+AQG++P+V++YT+L+  +  SG
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           +++ A +CL          F  M   G++P       LI+ F ++ +  EA  +L+ M  
Sbjct: 215 KWEKA-KCL----------FNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVH 263

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
            G   D+VTY+TL+K L    +  +  ++ LF ++ K+
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISE--ATQLFMSMKKL 299



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 166 YSILIHALGRSEKLYEAF----LLSQRQRL-TPLTYNALISACARNDDLEKALNLMSKMR 220
           +S+LI  L +  K+ EA     ++ QR  +   +TY  L+     ND + +A  L  KM+
Sbjct: 712 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 771

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV------G 274
           + G   D + Y  +++ L +T  I ++L  +L+K++  D  +       DVI       G
Sbjct: 772 KLGCLPDVVTYGTLMKGLCQTGNIKTAL--ELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             K G   +A       + +G+ P   +Y ++I     SG+  +A+ +F E+ + G++  
Sbjct: 830 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889

Query: 335 TKAYNALLKGYVKMGYLKDAEF 356
              Y+ ++ G+ K G +  A F
Sbjct: 890 AVTYSVMIHGFCKEGQIDKALF 911



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELL-YSILIHAL---GRSEKLYE 181
           + +L+K LC +    ++++L   ++S   ++   +  +++ YSI+I  L   GR ++  E
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 841

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   +   + P  ++Y +LI    R+  LE A +L ++M   G   + + YS++I    
Sbjct: 842 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 901

Query: 240 RTNKIDSSLLQKL 252
           +  +ID +L QK+
Sbjct: 902 KEGQIDKALFQKM 914


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 205/469 (43%), Gaps = 41/469 (8%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR + +++ +  ++++      +TY  LI  C R  D  KA  L  +M +       + Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I+ L   ++I  +  + +++ +    +  +    N ++ G+ K     KA+      
Sbjct: 232 TILIRGLCGESRISEA--ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
            G GL P   T+  +I  L  +   + A     ++   G+ P    YN L+ GY K G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  + SE+E+  +LPD  TYS+LI       R E A  +L+EM+     PN+  Y+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G  ++  +V  +M   G+EP+   ++ +ID + K   +  AM  +  M+ +G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD + +  LID HFK G    A  L +EMQE G  P                       
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP----------------------- 506

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG--LKP 589
                       NV T + L+D   + GR  DAI+     +       +    D     P
Sbjct: 507 ------------NVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +++   +LI     D R  +A      M+ +GL+PDV T   +++   R
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 178/385 (46%), Gaps = 11/385 (2%)

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           Q  N V+ G  K G      +  G     G SP   TY  +I      G  ++A  +F+E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P    Y  L++G      + +AE +   M  SG+LP+ +TY+ ++D Y     
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +  EM      PN   +  ++ G     E     + L +M S GV P+   YN 
Sbjct: 279 VKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID + K   L  A++    +    I PD  T++ LI       R + A+ L +EM+++G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TYN +I+   ++   E    +   M  +G+ PN++T++TL+D Y ++G+ + A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               GL  + V         GL P  +A  +LI+   +D    EAF + + M+E GL P+
Sbjct: 459 ----GLYTEMV-------IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYL 650
           V T + L+  L +  +       +L
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 201/430 (46%), Gaps = 27/430 (6%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSK 218
           ++Y+ILI  L    ++ EA  + +  R + +     TYN ++    +   ++KAL L  +
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  DG   + + + ++I  L +T+++ S+  +K   ++    +  +  + N +I G+ KA
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSA--RKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ S+A+      +   + P   TY+ +I  L    R  EA+ + +E+K+ G  P    Y
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY K G ++ A  V S+M   G+ P+  T+S LID Y  AG+ E+A  +  EM +
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ ++ G+   G  +  F++ KEM+ +G+ P+    + +ID   K   +  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 459 AMAAF----------------DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           A+  F                DR L     P+ + +  LI      GR  +A + F +M+
Sbjct: 527 AIKLFLAKTGTDTTGSKTNELDRSLCS---PNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   T  ++I          DV  L  ++   G++PN   Y  L   Y +SG   
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 563 DAIE-CLEGL 571
            A+  C EG+
Sbjct: 644 SALSFCGEGV 653



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 131/640 (20%), Positives = 243/640 (37%), Gaps = 146/640 (22%)

Query: 120 SYRAVPAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           S+  VP   +++ L+   C + + +  A ++ S ++KH +       YSILI  L   ++
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGN-LSEALSLHSEIEKHEILPDV-FTYSILIKGLCGVDR 383

Query: 179 LYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           + EA  L Q   ++   P  +TYN LI    +  ++EKA+ + S+M + G   + I +S 
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I    +  K+++++   LY E+    +  D      +I G  K G+  +A R     Q 
Sbjct: 444 LIDGYCKAGKMEAAM--GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQE 501

Query: 294 VGLSP---------------------------KTAT---------------------YAA 305
            GL P                           KT T                     Y A
Sbjct: 502 AGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTA 561

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L   GR  +A   F +++ SGL+P       +++G+ +  +L+D   + +++ + G
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 366 VLPDEHTYSLLIDAYANAGRWESA------------RI-----------------VLKEM 396
           ++P+   Y +L   Y  +G  +SA            R+                 V+ E 
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEK 681

Query: 397 EVSHAK------------------------PNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           +  H+                         P+  +      G +      +  Q+ ++M+
Sbjct: 682 KECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQ 741

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
               +PD     V +        L         +   G++ D    N+LI+ + KCG   
Sbjct: 742 MDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIG 801

Query: 493 RAEELFEEMQERGYFPCTTTYNIMI---NLLGEQERW--------EDVKRLLGNMR---- 537
            A  LF+  Q++      TT+  MI    L G+ E          E  KR   N R    
Sbjct: 802 TARRLFDGTQKKD----VTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEX 857

Query: 538 -AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD-GLKPSNLALN 595
            +  +LPN VT+  ++     +           GL ++    FR M+ D  L+P      
Sbjct: 858 ESSLVLPNDVTFMGVLMACSHA-----------GLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            +++         EA+   +++ +  ++P+ V + TL+ A
Sbjct: 907 CMVDLLCRAGLLTEAY---EFILKMPVRPNAVVWRTLLGA 943


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 227/495 (45%), Gaps = 20/495 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISA-CARNDDLEKALNLMSKMRQD 222
           Y+ ++    R+ +L  A  L+    + P   TY  ++ A CAR   +  AL+++ +MR+ 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGR-IADALSVLDEMRRR 144

Query: 223 GYHCDFINYSLVIQS-LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA-KAGD 280
           G       Y +++++  +R          ++ +++      LD    N V+     + G 
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204

Query: 281 ASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +A+R L  +    G  P   +Y AV+  L  + R    + + EE+   G  P    +N
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+    + G  +    V+++M   G  PD   Y+ ++D     G  E A  +L  M   
Sbjct: 265 TLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KPN   Y+ +L G      W++  ++L EM  +    D   +N+++D F +   ++  
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +   ++ML  G  PD IT+ T+I+   K G  D A  L + M   G  P T +Y I++  
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L   ERW D + L+  M  QG  PN VT+ T+++             C +GL +QA+   
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFL-----------CKKGLVEQAIELL 493

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           + M  +G  P  ++ +++I+  G+  +  EA  +L  M   G+ P+ + Y+++  AL + 
Sbjct: 494 KQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKE 553

Query: 640 DKFHKVFSSYLFFNI 654
            + ++V    +F NI
Sbjct: 554 GRINRVIQ--MFDNI 566



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 168/373 (45%), Gaps = 2/373 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YNA++          +  +LM +M + G   + + ++ +I  L R N +   + Q L 
Sbjct: 226 VSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR-NGLFERVHQVLA 284

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           + ++      D ++   V+ G  K G    A   L      GL P    Y  V+  L ++
Sbjct: 285 QMVD-HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSA 343

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  +AE +  E+ ++        +N L+  + + G +     ++ +M   G +PD  TY
Sbjct: 344 ERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITY 403

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +I+ +   G  + A ++LK M     +PN+  Y+ +L G      W     ++ +M  
Sbjct: 404 TTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIE 463

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ D 
Sbjct: 464 QGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDE 523

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL   M  +G  P T  Y+ + + L ++ R   V ++  N++   +  + V Y  ++ 
Sbjct: 524 ALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVIS 583

Query: 554 IYGQSGRFDDAIE 566
              + G  D AIE
Sbjct: 584 SLCKRGGTDRAIE 596



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 194/452 (42%), Gaps = 13/452 (2%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYEAFLL 185
           +L  +C    S+D A  ++  L     C    + Y+ ++  L      GR + L E  + 
Sbjct: 194 VLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV- 252

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R    P  +T+N LI    RN   E+   ++++M   G   D   Y+ V+  + +   
Sbjct: 253 --RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ +   ++   +    ++ +    N V+ G   A    +A   L             T+
Sbjct: 311 LEVA--HEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++     +G       + E++ E G  P    Y  ++ G+ K G + +A  ++  M  
Sbjct: 369 NILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  +Y++++    +A RW  A  ++ +M      PN   ++ ++     +G  ++
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LK+M  +G  PD   Y+ +ID  GK      A+   + M+++G+ P+TI ++++  
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR +R  ++F+ +Q+         YN +I+ L ++   +     L  M + G +P
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMP 608

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           N  TYT L+      G   +A E L  L  + 
Sbjct: 609 NESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 181/427 (42%), Gaps = 25/427 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL--------CYSYELLYSILIHALGRS---E 177
           ++++LK LC +            W +  +L        C    + ++ LI  L R+   E
Sbjct: 228 YNAVLKGLCMAKR----------WGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFE 277

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           ++++          TP    Y  ++    +   LE A  ++ +M   G   + + Y+ V+
Sbjct: 278 RVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVL 337

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           + L    + + +  ++L  E+  +   LD    N ++  F + G   + +  L      G
Sbjct: 338 KGLCSAERWEQA--EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   TY  VI      G   EA  + + +   G +P T +Y  +LKG        DAE
Sbjct: 396 CVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAE 455

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++S+M   G  P+  T++ +I+     G  E A  +LK+M ++   P+   YS ++ G 
Sbjct: 456 DLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGL 515

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+     ++L  M + G+ P+T  Y+ +     K   ++  +  FD +    I  D 
Sbjct: 516 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDA 575

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           + +N +I    K G  DRA E    M   G  P  +TY I+I  L  +   ++ + +L  
Sbjct: 576 VLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTE 635

Query: 536 MRAQGLL 542
           + ++G L
Sbjct: 636 LCSKGAL 642


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 226/479 (47%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G+   +     L    +   + P   +Y   I    +    ++A  ++++M 
Sbjct: 277 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME 336

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D I ++++IQ L    +I  +  + ++ +++    + D      ++  FA  G+
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDA--KDVFWKMKKSDQKPDRVTYITLLDKFADNGE 394

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   M      +  G +     Y AVI AL   GR  EA  +F+E+K+ G+ P   +YN+
Sbjct: 395 SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 454

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K     DA  +   M+  G  P+ +T+ L I+ Y  +G    A    + M+   
Sbjct: 455 LISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 514

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+    + +L G    G      +V  E+K+ GV PDT  Y +MI    K +    A+
Sbjct: 515 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAV 574

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+     PD +  N+LID  +K GR D A ++F +++E    P   TYN ++  L
Sbjct: 575 KIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGL 634

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G + + ++V  LL  M      PN++TY T++D   ++G  +DA++ L            
Sbjct: 635 GREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYS---------- 684

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            M T G  P   + N++I    +++R  EAF++   MK+  L PD  T  T++ + +++
Sbjct: 685 -MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKI 741



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 230/501 (45%), Gaps = 18/501 (3%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  L   L+ + G   +  E + +     + P   TY+ L+ A  +  D+E  L L+ 
Sbjct: 240 YTYNGLVYFLVKS-GFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR 298

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   +  +Y++ I+ L +  + D +   ++  E+E +  + D      +I     
Sbjct: 299 EMEAHGVKPNVYSYTICIRVLGQARRFDEAY--RILAEMENEGCKPDVITHTVLIQVLCD 356

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG  S A       +     P   TY  ++   +++G +     ++  +K  G      A
Sbjct: 357 AGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVA 416

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y A++    ++G + +A  +  EM++ G++P++++Y+ LI  +  A R+  A  + K M+
Sbjct: 417 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD 476

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +   KPN + +   +  Y   GE  +  Q  + MKS G+ PD    N ++    K   L 
Sbjct: 477 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 536

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  + + G+ PDTIT+  +I C  K  ++D A ++F +M E    P     N +I
Sbjct: 537 MAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLI 596

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + L +  R ++  ++   ++   L P   TY TL+   G+ G+  + +  LE        
Sbjct: 597 DTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLE-------- 648

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M      P+ +  N++++   ++    +A  +L  M   G  PD+ +Y T++  L+
Sbjct: 649 ---EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 705

Query: 638 RVDKFHKVFSSYLFFNIYKML 658
           + +++++ FS  +F  + K+L
Sbjct: 706 KEERYNEAFS--IFCQMKKVL 724



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 210/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+   GR   + E F + QRQ  +    T+ A+         L  A   +  M++ G   
Sbjct: 178 LMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVL 237

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ ++  L ++   D   L+ +YK +  D +    +  + ++V F K  D    + 
Sbjct: 238 NAYTYNGLVYFLVKSG-FDREALE-VYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 295

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  E++  G KP    +  L++   
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC 355

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G + DA+ V  +M++S   PD  TY  L+D +A+ G  +S   +   M+      N  
Sbjct: 356 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVV 415

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G      ++  EMK  G+ P+ + YN +I  F K +    A+  F  M
Sbjct: 416 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM 475

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G +P+  T    I+ + K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 476 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRL 535

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++ +F           D+AV  F  M  + 
Sbjct: 536 GMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF-----------DEAVKIFYDMIENN 584

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  L +NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 585 CVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 644



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 211/479 (44%), Gaps = 50/479 (10%)

Query: 129  WHSLLKNLCSS---NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-- 183
            ++++L  LC +   N ++D+ Y++ +       C      Y+ +I+ L + E+  EAF  
Sbjct: 662  YNTILDCLCKNGAVNDALDMLYSMTT-----KGCIPDLSSYNTVIYGLVKEERYNEAFSI 716

Query: 184  LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTR 240
                ++ L P   T   ++ +  +   +++AL+++ +   Q G   D  +   +++ + +
Sbjct: 717  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 241  TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
                + S+  +  + I    I LD   L  +I    K   A +A   +   +  G+S KT
Sbjct: 777  KAGTEKSI--EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKT 834

Query: 301  ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             +Y ++I  L +      AE +F E+KE G  P    YN LL    K   +++   V  E
Sbjct: 835  GSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEE 894

Query: 361  MERSG-----------------------------------VLPDEHTYSLLIDAYANAGR 385
            M R G                                     P   TY  L+D    AGR
Sbjct: 895  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954

Query: 386  WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             E A  +  EM     K N  IY+ +L G+R  G  ++   + ++M   G+ PD   Y +
Sbjct: 955  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014

Query: 446  MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            +IDT  K   L+  +  F ++L  G+EPD IT+N LID   K  R + A  LF EMQ++G
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074

Query: 506  YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TYN +I  LG+  +  +  ++   +  +G  PNV TY  L+  Y  SG  D A
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1133



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 230/530 (43%), Gaps = 50/530 (9%)

Query: 144  DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
            D A+ +   L++ NL    +  Y+ L+  LGR  K+ E   L +        P  +TYN 
Sbjct: 606  DEAWQIFYQLKEMNL-EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664

Query: 199  LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEI 256
            ++    +N  +  AL+++  M   G   D  +Y+ VI  L +  + +   S+  ++ K +
Sbjct: 665  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 724

Query: 257  ECD------------KIEL-------------------DGQLLNDVIVGFAKAGDASKAM 285
              D            KI L                   D    + ++ G  K     K++
Sbjct: 725  IPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSI 784

Query: 286  RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             F  +    G++        +I  L    + +EA  + ++ K  G+  +T +YN+L+ G 
Sbjct: 785  EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGL 844

Query: 346  VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            V    +  AE + +EM+  G  PDE TY+LL+DA   + R E    V +EM     +   
Sbjct: 845  VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 904

Query: 406  FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              Y+ I++G       ++   +   + S G  P    Y  ++D   K   +  A   F+ 
Sbjct: 905  VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964

Query: 466  MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
            ML  G + +   +N L++ H   G  ++   LF++M ++G  P   +Y I+I+ L +  +
Sbjct: 965  MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1024

Query: 526  WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
              D       +   GL P+++TY  L+D  G+S R            ++AV+ F  M+  
Sbjct: 1025 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL-----------EEAVSLFNEMQKK 1073

Query: 586  GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            G+ P+    NSLI   G+  + AEA  + + +   G KP+V TY  L++ 
Sbjct: 1074 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 12/365 (3%)

Query: 270 DVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           DVI     A   ++A+ RF   A+   +   TA+   ++  + + GR  +   VF+ ++ 
Sbjct: 138 DVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQR 197

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             +K     + A+  G    G L+ A   +  M+ +G++ + +TY+ L+     +G    
Sbjct: 198 QIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 257

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  V K M V    P+   YS ++  +  R + +    +L+EM++ GV+P+ + Y + I 
Sbjct: 258 ALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 317

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             G+      A      M +EG +PD IT   LI      GR   A+++F +M++    P
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 377

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +++   +    + V  +   M+A G   NVV YT ++D   Q GR  +A+E  
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-- 435

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M+  G+ P   + NSLI+ F +  R  +A  + +YM  +G KP+  T
Sbjct: 436 ---------MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYT 486

Query: 629 YTTLM 633
           +   +
Sbjct: 487 HVLFI 491



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/532 (22%), Positives = 226/532 (42%), Gaps = 23/532 (4%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
            P  + ++++   CS  S  D A  +   + ++N C    L+ + LI  L   GR ++ ++
Sbjct: 552  PDTITYTMMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLVVNSLIDTLYKAGRGDEAWQ 610

Query: 182  AFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             F   +   L P   TYN L++   R   +++ ++L+ +M    Y  + I Y+ ++  L 
Sbjct: 611  IFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLC 670

Query: 240  RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            +   ++ +L   LY       I  D    N VI G  K    ++A       + V L P 
Sbjct: 671  KNGAVNDAL-DMLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-LIPD 727

Query: 300  TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVK-MGYLKDAEFV 357
             AT   ++ +    G   EA  + +E   + G K    + ++L++G +K  G  K  EF 
Sbjct: 728  YATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFA 787

Query: 358  VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
               +  SG+  D+     LI       +   A  ++K+ +       +  Y+ ++ G  D
Sbjct: 788  -EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVD 846

Query: 418  RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                     +  EMK  G  PD   YN+++D  GK   +   +   + M  +G E   +T
Sbjct: 847  ENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVT 906

Query: 478  WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            +NT+I    K  R ++A +L+  +  +G+ P   TY  +++ L +  R ED + L   M 
Sbjct: 907  YNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEML 966

Query: 538  AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
              G   N   Y  L++ +  +G  +      + + DQ +N           P   +   +
Sbjct: 967  EYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN-----------PDIKSYTII 1015

Query: 598  INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            I+   +  +  +     + + E GL+PD++TY  L+  L +  +  +  S +
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 1067



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 170/384 (44%), Gaps = 42/384 (10%)

Query: 169  LIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
            LI  L + +K  EA  L ++ +     L   +YN+LI      + ++ A  L ++M++ G
Sbjct: 805  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG 864

Query: 224  YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
               D   Y+L++ ++ ++ +I+  L  K+ +E+     E      N +I G  K+    +
Sbjct: 865  CGPDEFTYNLLLDAMGKSMRIEEML--KVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 922

Query: 284  AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
            A+         G SP   TY  ++  L  +GR  +AE +F E+ E G K     YN LL 
Sbjct: 923  AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 982

Query: 344  GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            G+   G  +    +  +M   G+ PD  +Y+++ID    AG+                  
Sbjct: 983  GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLN---------------- 1026

Query: 404  NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
            +   Y                F+ L EM   G+EPD   YN++ID  GK   L  A++ F
Sbjct: 1027 DGLTY----------------FRQLLEM---GLEPDLITYNLLIDGLGKSKRLEEAVSLF 1067

Query: 464  DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            + M  +GI P+  T+N+LI    K G+   A +++EE+  +G+ P   TYN +I      
Sbjct: 1068 NEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVS 1127

Query: 524  ERWEDVKRLLGNMRAQGLLPNVVT 547
               +      G M   G LPN  T
Sbjct: 1128 GSTDSAYAAYGRMIVGGCLPNSST 1151



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 23/409 (5%)

Query: 255 EIECDKIELDGQLLNDVIVGFAKAG-DASK-AMRFLGMAQGVGLSPKTATYAA--VITAL 310
           E+ C    L G   +    G +  G  AS+ + R +G A+ V   P+    AA  VI AL
Sbjct: 85  EVCCCSGVLGGSPPSSRTAGVSSPGLSASRPSKRRIGRAR-VQPPPRDERRAAEDVIHAL 143

Query: 311 SNSGRTIEAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
            ++    EA    E  + +  +PR    T + N +L      G + D   V   M+R  V
Sbjct: 144 RSADGPAEA---LERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIV 200

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             +  T++ +       G   SA + L  M+ +    N++ Y+ ++      G  +   +
Sbjct: 201 KANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALE 260

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V K M   GV P    Y+V++  FGK   +   +     M + G++P+  ++   I    
Sbjct: 261 VYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLG 320

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  R+D A  +  EM+  G  P   T+ ++I +L +  R  D K +   M+     P+ V
Sbjct: 321 QARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRV 380

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY TL+D +  +G            S   +  +  M+ DG   + +A  ++I+A  +  R
Sbjct: 381 TYITLLDKFADNGE-----------SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 429

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
             EA  +   MK+ G+ P+  +Y +L+   ++ D+F      + + +I+
Sbjct: 430 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIH 478


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 235/516 (45%), Gaps = 37/516 (7%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS LI A  +  +   A   L+  R+R   L  +TYN LI+   R+  +E+A      M 
Sbjct: 120 YSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 179

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y  +I  L ++ + + +  + L  E+ C +++ +  +  ++I GF + G+
Sbjct: 180 DYGLVPDGFTYGALINGLCKSRRSNEA--KALLDEMSCAELKPNVVVYANLIDGFMREGN 237

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A +A + +      G+ P   TY  ++  L   G+   A  + +++     +P T  YN 
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +++G+ +    KDA  ++SEME +G+ P+ +TYS++I     +G  E A  +L+EM    
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN+F+Y+ +++GY   G      ++  +M    V PD + YN +I    K   +  + 
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M   G+ P+  T++ LI  + K G  + AE+L + M + G  P    Y   I+LL
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY---IDLL 474

Query: 521 GEQERWEDVKRL---LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
               + +D++++     +M  QG++ +   Y  L+     SG  + A   L         
Sbjct: 475 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV 534

Query: 570 -----------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                      GL      ++A      M   G+ P+ +  N+LI+   +    + A  V
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 594

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              +   GL P+ VTYT+L+    +V      F  Y
Sbjct: 595 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLY 630



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 235/504 (46%), Gaps = 36/504 (7%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ----DGYHCD 227
           GR +   E  L+ + + L P     NAL+    R D    A+ L+ K+R+     G   D
Sbjct: 61  GRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD----AMALLWKVREFMVGAGISPD 116

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
              YS +I++  +  + D++  +K+  E+      L+    N +I G  ++G   +A  F
Sbjct: 117 VYTYSTLIEAYCKVREFDTA--KKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGF 174

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
               +  GL P   TY A+I  L  S R+ EA+A+ +E+  + LKP    Y  L+ G+++
Sbjct: 175 KKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMR 234

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G   +A  ++ EM  +GV P++ TY  L+      G+ + A ++LK+M     +P++  
Sbjct: 235 EGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTIT 294

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ I+ G+      +  F++L EM+++G+ P+ + Y++MI    +      A    + M 
Sbjct: 295 YNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 354

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           ++G++P+   +  LI  + + G    A E+F++M +    P    YN +I  L +  R E
Sbjct: 355 TKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVE 414

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----------- 576
           +  +    M+ +GLLPN  TY+ L+  Y ++G  + A + ++ + D  +           
Sbjct: 415 ESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 474

Query: 577 -------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                        + F+ M   G+   N     LI+          AF VL  +++NG  
Sbjct: 475 ESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSV 534

Query: 624 PDVVTYTTLMKALIRVDKFHKVFS 647
           PDV  Y++L+  L +     K F 
Sbjct: 535 PDVHVYSSLISGLCKTADREKAFG 558



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 24/381 (6%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G G+SP   TY+ +I A         A+ V  E++E G    T  YN L+ G  + G ++
Sbjct: 110 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVE 169

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A     +ME  G++PD  TY  LI+    + R   A+ +L EM  +  KPN  +Y+ ++
Sbjct: 170 EAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLI 229

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G     F+++KEM ++GV+P+   Y+ ++    K   +  A     +M+ +   
Sbjct: 230 DGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHR 289

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PDTIT+N +I+ HF+      A  L  EM+  G  P   TY+IMI+ L +    E    L
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------GLS- 572
           L  M  +GL PN   Y  L+  Y + G    A E  +                   GLS 
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409

Query: 573 ----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               +++   F  M+  GL P+    + LI+ + ++     A  ++Q M + GLKP+ V 
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           Y  L+++  + D   KV S++
Sbjct: 470 YIDLLESYFKSDDIEKVSSTF 490



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 228/509 (44%), Gaps = 20/509 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ L+  LC S  +++ A+     ++ + L       Y  LI+ L +S +  EA  L   
Sbjct: 155 YNVLIAGLCRS-GAVEEAFGFKKDMEDYGLVPD-GFTYGALINGLCKSRRSNEAKALLDE 212

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L P  + Y  LI    R  + ++A  ++ +M   G   + I Y  +++ L +  +
Sbjct: 213 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D + L  L K++  D    D    N +I G  +  +   A R L   +  G+SP   TY
Sbjct: 273 MDRASL--LLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY 330

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + +I  L  SG   +A  + EE+   GLKP    Y  L+ GY + G +  A  +  +M +
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             VLPD + Y+ LI   +  GR E +     +M+     PN F YS ++ GY   G+ + 
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             Q+++ M  +G++P+   Y  +++++ K + +    + F  ML +G+  D   +  LI 
Sbjct: 451 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 510

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  + A  +  E+++ G  P    Y+ +I+ L +    E    +L  M  +G+ P
Sbjct: 511 NLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N+V Y  L+D   +SG               A N F  +   GL P+ +   SLI+   +
Sbjct: 571 NIVCYNALIDGLCKSGDI-----------SYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
               + AF +   M   G+ PD   Y+ L
Sbjct: 620 VGDISNAFYLYNEMLATGITPDAFVYSVL 648



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 167/380 (43%), Gaps = 54/380 (14%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK---MGYL-KDAEF 356
           A    ++     SGR  +A  V   +++ GL P  +  NALLK  ++   M  L K  EF
Sbjct: 48  AVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREF 107

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +V     +G+ PD +TYS LI+AY     +++A+ VL EM       N+  Y+ ++AG  
Sbjct: 108 MVG----AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM---------- 466
             G  +  F   K+M+  G+ PD   Y  +I+   K    + A A  D M          
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 467 -------------------------LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                                    ++ G++P+ IT++ L+    K G+ DRA  L ++M
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
               + P T TYN++I         +D  RLL  M   G+ PNV TY+ ++    QSG  
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 343

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           + A + LE            M T GLKP+      LI+ +  +   + A  +   M +  
Sbjct: 344 EKASDLLEE-----------MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392

Query: 622 LKPDVVTYTTLMKALIRVDK 641
           + PD+  Y +L+  L +V +
Sbjct: 393 VLPDLYCYNSLIFGLSKVGR 412



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 208/476 (43%), Gaps = 47/476 (9%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+++I    R     +AF LLS+ +   ++P   TY+ +I    ++ + EKA +L+ +
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   +   Y+ +I    R   +  SL  +++ ++    +  D    N +I G +K 
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNV--SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   ++ ++    Q  GL P   TY+ +I     +G    AE + + + ++GLKP    Y
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470

Query: 339 NALLKGYVKM-----------------------------------GYLKDAEFVVSEMER 363
             LL+ Y K                                    G ++ A  V+SE+E+
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK 530

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G +PD H YS LI         E A  +L EM      PN   Y+ ++ G    G+   
Sbjct: 531 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 590

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V   + + G+ P+   Y  +ID   K   + +A   ++ ML+ GI PD   ++ L  
Sbjct: 591 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 650

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G  ++A  L EEM  RG+    +++N +++   ++ + ++  +LL  +  +GL+P
Sbjct: 651 GCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVP 709

Query: 544 NVVTYTTLVDIYGQSGRFDDA----IECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           N +T   ++    ++G+  +     +E  +  S+ A   F  +  D +    + L+
Sbjct: 710 NALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 765



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 176/418 (42%), Gaps = 68/418 (16%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMS 217
           E  YS LIH   ++  L  A  L QR   T L      Y  L+ +  ++DD+EK  +   
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 491

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   Y ++I +L+ +  ++++   ++  EIE +    D  + + +I G  K
Sbjct: 492 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAF--RVLSEIEKNGSVPDVHVYSSLISGLCK 549

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             D  KA   L      G+ P    Y A+I  L  SG    A  VF  +   GL P    
Sbjct: 550 TADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVT 609

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G  K+G + +A ++ +EM  +G+ PD   YS+L    ++AG  E A  +++EM 
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669

Query: 398 V-SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKY 453
           +  HA  +SF  + ++ G+  RG+ Q T ++L  +   G+ P+      +I      GK 
Sbjct: 670 LRGHASISSF--NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727

Query: 454 NCLH----------------HAMAAFDRMLSEGIEP------------------------ 473
           + +H                H  + F  M+++G  P                        
Sbjct: 728 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 787

Query: 474 DTI----------TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
           D I          ++  ++D   + G+   A  L +EM +RG    T     ++ LLG
Sbjct: 788 DVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPT-----LVALLG 840



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 24/204 (11%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +A+  R LS+         + L+D + K GR   A E+   M++RG  P     N ++ 
Sbjct: 31  VLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLK 90

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
            L   +    + ++   M   G+ P+V TY+TL++ Y +   FD A +            
Sbjct: 91  DLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 150

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  G  ++A    + M   GL P      +LIN   + +R  EA A+L
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
             M    LKP+VV Y  L+   +R
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMR 234


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 224/478 (46%), Gaps = 16/478 (3%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +SY ++ + +  A GR     E F     + + P  +TYN +I    +  DLE    L  
Sbjct: 201 FSYNVVIAGMWRA-GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 259

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   + I Y++++  L R  ++  +    L  E+   K+  DG   + +  G ++
Sbjct: 260 QMVCHGLKPNAITYNVLLSGLCRAGRMGET--SALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD+   +   G     G++    T + ++  L   G+   AE V + L  +GL P    
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ GY + G L+ A     +M+   + PD  TY+ LI+    A R  +A+ +L EM+
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P    ++ ++  Y   G+ ++ F VL EM+ +G++P+   Y  +++ F K   + 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+A  D M  + + P+   +N +ID + + G  D+A  L E+M+  G  P   TYN++I
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L  Q +  + + ++ ++    L+P+ V+Y TL+              C  G  D+A++
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC-----------CYRGNIDKALD 606

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             + M   G+K +    + LI+  G   R  E   + Q M +N + P    +  +++A
Sbjct: 607 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 212/465 (45%), Gaps = 16/465 (3%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY-HCDFIN 230
           GR   +  AF  L S   R     +N  + AC    DL +A+ ++ +M +DG    +  +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++VI  + R  +   ++  +++ E+    +  +    N +I G  K GD     R    
Sbjct: 203 YNVVIAGMWRAGRGGDAV--EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   TY  +++ L  +GR  E  A+ +E+    + P    Y+ L  G  + G 
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            K    +  +  ++GV   ++T S+L++     G+   A  VL+ +  +   P   IY+ 
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   GE +  F    +MKS  ++PD   YN +I+   K   + +A      M   G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P   T+NTLID + + G+ ++   +  EMQE G  P   +Y  ++N   +  +  +  
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +L +M  + +LPN   Y  ++D Y +            G +DQA      M+++G+ PS
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVE-----------HGPNDQAFILVEKMKSNGISPS 549

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            +  N LI       + +EA  ++  +  + L PD V+Y TL+ A
Sbjct: 550 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 594



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 187/404 (46%), Gaps = 47/404 (11%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA-TYAAVITALSNSGRTIEAEAVFEELK 327
           N  +     AGD  +A+  L      G  P  A +Y  VI  +  +GR  +A  VF+E+ 
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E  + P    YN ++ G++K G L+    +  +M   G+ P+  TY++L+     AGR  
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 287

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF---------------------- 425
               +L EM      P+ F YS +  G    G+ +                         
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 347

Query: 426 -------------QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                        +VL+ + ++G+ P    YN +I+ + +   L  A + F +M S  I+
Sbjct: 348 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 407

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N LI+   K  R   A++L  EMQ+ G  P   T+N +I+  G   + E    +
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M+  GL PNVV+Y ++V+ + ++G+  +A+  L+ +  + V            P+  
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV-----------LPNAQ 516

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             N++I+A+ E   + +AF +++ MK NG+ P +VTY  L+K L
Sbjct: 517 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 153 LQKHNLCYSYE---LLYSILIHALGRSEKLYE-AFLLSQ--RQRLTP--LTYNALISACA 204
           L+   +C+  +   + Y++L+  L R+ ++ E + LL +   Q++ P   TY+ L    +
Sbjct: 257 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN D +  L+L  K  ++G        S+++  L +  K+  S+ +++ + +    +   
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV--SIAEEVLQSLVNAGLVPT 374

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             + N +I G+ + G+   A    G  +   + P   TY A+I  L  + R   A+ +  
Sbjct: 375 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 434

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E++++G+ P  + +N L+  Y + G L+    V+SEM+ +G+ P+  +Y  +++A+   G
Sbjct: 435 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 494

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   A  +L +M      PN+ +Y+ I+  Y + G   + F ++++MKS+G+ P    YN
Sbjct: 495 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 554

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I      + +  A    + + +  + PD +++NTLI      G  D+A +L + M + 
Sbjct: 555 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 614

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           G      TY+ +I+ LG   R  +++ L   M    ++P+   +  +V+ Y + G
Sbjct: 615 GIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 669



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 12/365 (3%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK-A 337
           G  +   R  G+    G  P T  +   + A   +G   EA  +   +   G  P    +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  + G   DA  V  EM    VLP+  TY+ +ID +   G  E+   +  +M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN+  Y+ +L+G    G    T  +L EM S  + PD   Y+++ D   +     
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             ++ F + L  G+     T + L++   K G+   AEE+ + +   G  P    YN +I
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N   +    E      G M+++ + P+ +TY  L++   ++ R  +A + L  + D  VN
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                      P+    N+LI+A+G   +  + F VL  M+ENGLKP+VV+Y +++ A  
Sbjct: 443 -----------PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 491

Query: 638 RVDKF 642
           +  K 
Sbjct: 492 KNGKI 496



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 12/334 (3%)

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP-DEHT 372
           GR  +    F  L  +G +P T A+N  ++  V  G L +A  ++  M R G  P +  +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+++I     AGR   A  V  EM      PN   Y+ ++ G+   G+ +  F++  +M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G++P+   YNV++    +   +    A  D M S+ + PD  T++ L D   + G   
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
               LF +  + G      T +I++N L +  +    + +L ++   GL+P  V Y TL+
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           + Y Q+G        LEG    A + F  M++  +KP ++  N+LIN   + +R   A  
Sbjct: 383 NGYCQTGE-------LEG----AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 431

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +L  M++NG+ P V T+ TL+ A  R  +  K F
Sbjct: 432 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 178/392 (45%), Gaps = 12/392 (3%)

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH--NLCYSYELLYSILIHALGRSE 177
           S + VP    +S+L +  S N     + A++S   K+  N     +   SIL++ L +  
Sbjct: 298 SQKMVPDGFTYSILFDGLSRNGD---SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 354

Query: 178 KLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           K+  A  + Q      L P  + YN LI+   +  +LE A +   +M+      D I Y+
Sbjct: 355 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 414

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L +  +I ++  Q L  E++ + +    +  N +I  + + G   K    L   Q
Sbjct: 415 ALINGLCKAERITNA--QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P   +Y +++ A   +G+  EA A+ +++    + P  + YNA++  YV+ G   
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 532

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  +V +M+ +G+ P   TY+LLI    N  +   A  ++  +      P++  Y+ ++
Sbjct: 533 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           +    RG   +   + + M   G++     Y+ +I   G    L+     + +M+   + 
Sbjct: 593 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 652

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           P     N +++ + K G   +AE+L +EM ++
Sbjct: 653 PSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 12/267 (4%)

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF- 442
           GR    R     +  + A+P++F +++ +      G+      +L+ M   G  P   F 
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YNV+I    +      A+  FD M    + P+ IT+NT+ID H K G  +    L ++M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TYN++++ L    R  +   LL  M +Q ++P+  TY+ L D   ++G   
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD-- 320

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                    S   ++ F     +G+   +   + L+N   +D + + A  VLQ +   GL
Sbjct: 321 ---------SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 371

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
            P  V Y TL+    +  +    FS++
Sbjct: 372 VPTRVIYNTLINGYCQTGELEGAFSTF 398


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 239/544 (43%), Gaps = 55/544 (10%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYN 197
           ID AY +V  + +     +   +Y+ LI++L +   L +A LL     L  L     TY+
Sbjct: 346 IDDAYELVVKVGRFGFVPNL-FVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI +  R+  L+ A++   +M QDG       Y+ +I    +    D S  + L+ E+ 
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFG--DLSAAESLFIEMT 462

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +E        +I G+ K     KA +        G++P   T+ A+I+ L ++ +  
Sbjct: 463 NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMA 522

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +F+EL E  +KP    YN L++GY + G +  A  ++ +M + G++PD +TY  LI
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW-----------QRT-- 424
               + GR   A+  + ++   + K N   YS +L GY   G             QR   
Sbjct: 583 SGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGIN 642

Query: 425 ----------------------FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
                                 F +LK+M   G+ PD   Y  MIDT+ K      A   
Sbjct: 643 MDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           +D M++E   P+ +T+  L++   K G  DRA  LF+ MQ     P + TY   ++ L +
Sbjct: 703 WDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           +   ++   L   M  +GLL N VT+  ++  + + GRF +A + L  +++         
Sbjct: 763 EGNMKEAIGLHHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTE--------- 812

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +G+ P  +  ++LI  +        +  +   M   GL+PD+V Y  L+       + 
Sbjct: 813 --NGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGEL 870

Query: 643 HKVF 646
            K F
Sbjct: 871 DKAF 874



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/508 (22%), Positives = 218/508 (42%), Gaps = 61/508 (12%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R  P T +A++ +     D  +A   +  M  +G+    + Y+++I  L + +++  ++ 
Sbjct: 222 RPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVE 281

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K  + +    +  D      +++GF +       ++ +     +G SP  A  + ++  
Sbjct: 282 VK--RSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDG 339

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+  +A  +  ++   G  P    YNAL+    K G L  AE + S M    + P+
Sbjct: 340 LRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPN 399

Query: 370 EHTYSLLIDAYANAGRWE-----------------------------------SARIVLK 394
             TYS+LID++  +GR +                                   +A  +  
Sbjct: 400 GITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFI 459

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM     +P +  ++ +++GY    + Q+ F++  +M  +G+ P+ + +  +I      N
Sbjct: 460 EMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTN 519

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A   FD ++   I+P  +T+N LI+ + + G+ D+A EL E+M ++G  P T TY 
Sbjct: 520 KMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYR 579

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------- 566
            +I+ L    R    K  + ++  Q +  N + Y+ L+  Y Q GR  +A+         
Sbjct: 580 PLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQR 639

Query: 567 -------CLEGLSDQAV---------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                  C   L D A+         +  + M   GL+P N+   S+I+ + ++    +A
Sbjct: 640 GINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKA 699

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F     M      P+VVTYT LM  L +
Sbjct: 700 FECWDLMVTEECFPNVVTYTALMNGLCK 727



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/569 (24%), Positives = 239/569 (42%), Gaps = 73/569 (12%)

Query: 70  DDDDVLSLQKQRYDFTP-------LLNFLSENSNSESASALASSPSSLNRVEFKLAESYR 122
           DD   L ++  R+ F P       L+N L +  + + A  L S+ S +N           
Sbjct: 347 DDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN----------- 395

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYS--ILIHALGRSE 177
             P  + +S+L +    +  +D+A +    + +  +    Y+Y  L +       L  +E
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAE 455

Query: 178 KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
            L+   + ++    T  T+ +LIS   ++  ++KA  L +KM  +G   +   ++ +I  
Sbjct: 456 SLFIE-MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L  TNK+  +   +L+ E+   KI+      N +I G+ + G   KA   L      GL 
Sbjct: 515 LCSTNKMAEA--SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA--- 354
           P T TY  +I+ L ++GR  +A+   ++L +  +K     Y+ALL GY + G L +A   
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSA 632

Query: 355 --EFV------------------------------VSEMERSGVLPDEHTYSLLIDAYAN 382
             E +                              + +M   G+ PD   Y+ +ID Y+ 
Sbjct: 633 SCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSK 692

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G ++ A      M      PN   Y+ ++ G    GE  R   + K M+++ V P++  
Sbjct: 693 EGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSIT 752

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y   +D   K   +  A+     ML +G+  +T+T N +I    K GR+  A ++  EM 
Sbjct: 753 YGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT 811

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           E G FP   TY+ +I             +L   M  +GL P++V Y  L  IYG      
Sbjct: 812 ENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLL--IYGC----- 864

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               C+ G  D+A      M   G+ P N
Sbjct: 865 ----CVNGELDKAFELRDDMLRRGIIPDN 889



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 210/473 (44%), Gaps = 16/473 (3%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G+ +  YE  +   R    P    YNALI++  +  DL+KA  L S M       + I Y
Sbjct: 344 GKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY 403

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S++I S  R+ ++D ++    +  +  D I       N +I G  K GD S A       
Sbjct: 404 SILIDSFCRSGRLDVAI--SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              G+ P   T+ ++I+      +  +A  ++ ++ ++G+ P    + AL+ G      +
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  +  E+    + P E TY++LI+ Y   G+ + A  +L++M      P+++ Y  +
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           ++G    G   +    + ++    V+ +   Y+ ++  + +   L  A++A   M+  GI
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             D +    LID   K        +L ++M ++G  P    Y  MI+   ++  ++    
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M  +   PNVVTYT L++   ++G  D A     GL       F+ M+   + P++
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRA-----GL------LFKRMQAANVPPNS 750

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +     ++   ++    EA   L +    GL  + VT+  +++   ++ +FH+
Sbjct: 751 ITYGCFLDNLTKEGNMKEAIG-LHHAMLKGLLANTVTHNIIIRGFCKLGRFHE 802



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 142/620 (22%), Positives = 252/620 (40%), Gaps = 77/620 (12%)

Query: 35  VSTITGITTATASGESSFSSSSFTSKQNDTEEEE----EDDDDVLSLQKQRYDFTPLLNF 90
           VS +  I     S + +F+ +S +S       E+      DD  L+L+          NF
Sbjct: 41  VSLLCDIVRGKQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAKLALR--------FFNF 92

Query: 91  LSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVV 150
           L  + N      +  S +S   +   L  S    PA   +SLL  L    S     ++  
Sbjct: 93  LGLHKN------MNHSTTSYAIMVHALVHSRLFWPA---NSLLHTLLLRESHPKCVFS-- 141

Query: 151 SWLQKHNLC-YSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACA 204
            +L  +  C +S  L +++L+     S ++++A ++ +      L P   T +AL++   
Sbjct: 142 HFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLL 201

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           +         L  +    G   D    S V++S+      D    ++  + +E +  +L 
Sbjct: 202 KVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELK--DFLRAKEKIRWMEANGFDLS 259

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I G  K    S+A+       G GL+    TY  ++       +      + +
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+ E G  P   A + L+ G  K G + DA  +V ++ R G +P+   Y+ LI++    G
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGG 379

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             + A ++   M + + +PN   YS                                   
Sbjct: 380 DLDKAELLYSNMSLMNLRPNGITYS----------------------------------- 404

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++ID+F +   L  A++ FDRM+ +GI      +N+LI+   K G    AE LF EM  +
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P  TT+  +I+   +  + +   +L   M   G+ PNV T+T L+     + +  +A
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
            E  + L ++ +           KP+ +  N LI  +  D +  +AF +L+ M + GL P
Sbjct: 525 SELFDELVERKI-----------KPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVP 573

Query: 625 DVVTYTTLMKALIRVDKFHK 644
           D  TY  L+  L    +  K
Sbjct: 574 DTYTYRPLISGLCSTGRVSK 593



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 106/488 (21%), Positives = 203/488 (41%), Gaps = 40/488 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           Y+I++HAL  S   + A              N+L+      +   K +   S        
Sbjct: 106 YAIMVHALVHSRLFWPA--------------NSLLHTLLLRESHPKCV--FSHFLDSYKR 149

Query: 226 CDF---INYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           C F   + ++L++Q+   +++I D+ ++ KL   +  + +  + + L+ ++ G  K    
Sbjct: 150 CKFSSTLGFNLLVQNYVLSSRIFDAVVIVKL---MFANNLLPEVRTLSALLNGLLKVRKF 206

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
                    +   G+ P   T +AV+ ++      + A+     ++ +G       YN L
Sbjct: 207 ITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVL 266

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K   + +A  V   +   G+  D  TY  L+  +    ++E+   ++ EM     
Sbjct: 267 IHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGF 326

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P     S ++ G R +G+    ++++ ++   G  P+   YN +I++  K   L  A  
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAEL 386

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            +  M    + P+ IT++ LID   + GR D A   F+ M + G       YN +IN   
Sbjct: 387 LYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN--- 443

Query: 522 EQERWEDV---KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            Q ++ D+   + L   M  +G+ P   T+T+L+  Y           C +    +A   
Sbjct: 444 GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY-----------CKDLQVQKAFKL 492

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  M  +G+ P+     +LI+      + AEA  +   + E  +KP  VTY  L++   R
Sbjct: 493 YNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCR 552

Query: 639 VDKFHKVF 646
             K  K F
Sbjct: 553 DGKIDKAF 560



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 22/325 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           +  L+  LCS+   +  A   +  L K N+  + E+ YS L+H   +  +L EA      
Sbjct: 578 YRPLISGLCST-GRVSKAKDFIDDLHKQNVKLN-EMCYSALLHGYCQEGRLMEALSASCE 635

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ +   +  + +  LI    +  D +   +L+  M   G   D + Y+ +I + ++   
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLS 297
                     K  EC  + +  +   +V+       G  KAG+  +A       Q   + 
Sbjct: 696 FK--------KAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P + TY   +  L+  G   EA  +   + + GL   T  +N +++G+ K+G   +A  V
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKV 806

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +SEM  +G+ PD  TYS LI  Y  +G   ++  +   M     +P+   Y+ ++ G   
Sbjct: 807 LSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCV 866

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHF 442
            GE  + F++  +M   G+ PD  +
Sbjct: 867 NGELDKAFELRDDMLRRGIIPDNKY 891


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 19/452 (4%)

Query: 195 TYNALISA-CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           T+  ++SA CAR D L+KA++  + +  +        Y++++  L + +K++ +    ++
Sbjct: 165 THGVILSALCARRD-LDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERAC--DVF 221

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+     + D    + +I G +KAG   +A + + +    G  P    Y +++  L   
Sbjct: 222 EEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKC 281

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA    +E++   L+PR   Y+ ++ GY+ MG ++ A  V+ EM      PD  +Y
Sbjct: 282 GRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISY 341

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++ I+A  + GR E A  V + M     KP+   Y  I+  +   G       VL+ M  
Sbjct: 342 TMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 401

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           + V+P+ + Y +++D F K + L  A+  + R+L +GI P T+T+NT+I+   K  + D 
Sbjct: 402 AAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDE 461

Query: 494 AEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           A EL  EMQ R     P   TY+++I+ LG+    E    LL  M   G++P+  TYT+L
Sbjct: 462 ALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSL 521

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +     +G+   A+E LE            M   G+ P +    +L+        DA A+
Sbjct: 522 IQTLAGAGKVSRAMELLEE-----------MLKAGIFPDDHTYGTLVQILCRSDVDA-AW 569

Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL-IRVDKF 642
            +LQ M  NG  P+  T+  + K   +++D+ 
Sbjct: 570 DLLQEMMRNGHTPNEFTFKAVEKGFRLQLDRL 601



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 199/453 (43%), Gaps = 14/453 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  T N+L+ A  R   L  AL        +    +  +++++++     +  D  ++  
Sbjct: 95  TLFTRNSLLLALVRGGHLSDALGFFQSSISEP---NVSSFNILLRGFAARD--DFEVVNA 149

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +E++   I  +G     ++       D  KA+ +          P   TY  ++  L 
Sbjct: 150 LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLC 209

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + +   A  VFEE+   G KP   AY++L+ G  K G + +A  +V  M   G  P   
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAV 269

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ ++      GR + A   ++EM     +P    YS I+ GY   G+ ++ F V++EM
Sbjct: 270 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEM 329

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                 PDT  Y + I+          A   F+ M+ +G +PD  T+  +ID   K G  
Sbjct: 330 ADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  +   M +    P    Y ++++   +  R E+   L   +   G+LP+ VTY T+
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 449

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++   +  + D+A+E L  +           R + L+PS +  + +I+  G+   +  AF
Sbjct: 450 INALCKLKKMDEALELLREMQR---------RKEELEPSIVTYSMIIHGLGKVGMEERAF 500

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +L  M +NG+ PD  TYT+L++ L    K  +
Sbjct: 501 DLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 533



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 180/381 (47%), Gaps = 13/381 (3%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N ++ GFA   D       L   +  G++   AT+  +++AL       +A + F  + 
Sbjct: 131 FNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVS 190

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
            +  +P    Y  L+ G  K   ++ A  V  EM R G  PD   YS LID  + AGR +
Sbjct: 191 PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVD 250

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            AR ++  M      P +  Y+ I+AG    G  Q   + ++EM+   + P    Y+ ++
Sbjct: 251 EARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 310

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             +     +  A A  + M      PDTI++   I+  +  GR + AE++FE M E+G  
Sbjct: 311 TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 370

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I+   ++        +L  M    + PN   YT ++D + +S R ++A+E 
Sbjct: 371 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM--KENGLKPD 625
            +          R+++ DG+ PS +  N++INA  + ++  EA  +L+ M  ++  L+P 
Sbjct: 431 YQ----------RILK-DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPS 479

Query: 626 VVTYTTLMKALIRVDKFHKVF 646
           +VTY+ ++  L +V    + F
Sbjct: 480 IVTYSMIIHGLGKVGMEERAF 500



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 145/335 (43%), Gaps = 27/335 (8%)

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+LL   V+ G+L DA   +   + S   P+  ++++L+  +A    +E    +L+EM+ 
Sbjct: 100 NSLLLALVRGGHLSDA---LGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKS 156

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N   +  IL+    R +  +       +  +  EP    Y V++D   K + +  
Sbjct: 157 RGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVER 216

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ M+ +G +PD I +++LID   K GR D A +L + M  RG  P    Y  ++ 
Sbjct: 217 ACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVA 276

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD----- 573
            L +  R ++  + +  MR + L P V TY+ +V  Y   G+ + A   +E ++D     
Sbjct: 277 GLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAP 336

Query: 574 -------------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                              +A   F  M   G KP       +I+ F ++   A A  VL
Sbjct: 337 DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL 396

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + M +  +KP+   YT +M   ++  +  +    Y
Sbjct: 397 RLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 11/281 (3%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           ++ A+AV+  +   + C    + Y++ I AL   GR E+  + F     +   P   TY 
Sbjct: 319 VEKAFAVMEEMADRD-CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 377

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            +I    +   +  A +++  M +     +   Y++++    ++++++ +L  +LY+ I 
Sbjct: 378 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL--ELYQRIL 435

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG--LSPKTATYAAVITALSNSGR 315
            D I       N VI    K     +A+  L   Q     L P   TY+ +I  L   G 
Sbjct: 436 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGM 495

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              A  +  E+ ++G+ P    Y +L++     G +  A  ++ EM ++G+ PD+HTY  
Sbjct: 496 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGT 555

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           L+     +   ++A  +L+EM  +   PN F +  +  G+R
Sbjct: 556 LVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGFR 595


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 198/407 (48%), Gaps = 4/407 (0%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +S   L S L+ A  R +    AF  + R+R++P   T+N +IS   +   L KA ++  
Sbjct: 151 FSVNRLLSALVAA-ERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAK 209

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFA 276
            +R  G     + Y+ +I    +  +      +  L KE+    I  +    N ++ G+ 
Sbjct: 210 DIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYC 269

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K  + + A+R     +  G++    TY+A++  L + G+  E   + +E+K+ GL P   
Sbjct: 270 KDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLA 329

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             N++L G+ K G + DAE  +  ME+  V P+  TY++L+D Y    + + A  V + M
Sbjct: 330 TLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAM 389

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +PN+ IY+ ++AG+   G+W+    +L EM+  GV  D   YNV+I        +
Sbjct: 390 SGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEV 449

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+   D ML  G+EP  +T+NT+I+ + + G    A E+   M++        TYN+ 
Sbjct: 450 RKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVF 509

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           I  L    + E+   LL  M  +GL+PN VTY T+ +   + G   D
Sbjct: 510 IKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 14/352 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK---MGYLK 352
           +SP   T+  VI+ L  +G+  +A  V ++++  GL P    YN ++ GY K    G + 
Sbjct: 181 VSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMY 240

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             + ++ EM  +G+ P+E T+++L++ Y       +A  V +EM+      +   YS ++
Sbjct: 241 HVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV 300

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G    G+ +   +++ EMK  G+ P+    N +++ F K   +  A    D M  + ++
Sbjct: 301 WGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVK 360

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+ +T+  L+D + +  +   A  + E M  +G  P    YN +I        W  V  L
Sbjct: 361 PNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGL 420

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  MR +G+  ++VTY  L+              C++G   +AV     M   GL+P +L
Sbjct: 421 LDEMRMKGVRADIVTYNVLIGAL-----------CVKGEVRKAVKLLDEMLMVGLEPVHL 469

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             N++IN + E      A+ +   M++   + +VVTY   +K L R+ K  +
Sbjct: 470 TYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEE 521



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 206/491 (41%), Gaps = 66/491 (13%)

Query: 161 SYELLYSILIHALGRSEKL---YEAFLLS----QRQRLTPLTYNALISACA---RNDDLE 210
           S  L+  +L+ AL  + +    YEAFLL+     R R +  + N L+SA     R D  E
Sbjct: 111 SSPLIADLLVLALASASQPLASYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAE 170

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +A     + R      D   +++VI  L +T                       GQL   
Sbjct: 171 RAFKAALRRRVSP---DLFTFNIVISGLCKT-----------------------GQL--- 201

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL---SNSGRTIEAEAVFEELK 327
                 KAGD +K +R  G+A      P   TY  +I        +GR    +A+ +E+ 
Sbjct: 202 -----RKAGDVAKDIRAWGLA------PSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E+G+ P    +N L+ GY K      A  V  EM++ G+     TYS L+    + G+ E
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVE 310

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               ++ EM+     PN    + +L G+  +G        +  M+   V+P+   Y +++
Sbjct: 311 EGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILV 370

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D + + + +  A+A  + M  +G+ P+   +N LI    + G +     L +EM+ +G  
Sbjct: 371 DGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVR 430

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               TYN++I  L  +       +LL  M   GL P  +TY T+++ Y + G    A E 
Sbjct: 431 ADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYE- 489

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLAL-NSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                       R     G K +N+   N  I       +  E   +L  M E GL P+ 
Sbjct: 490 -----------IRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNG 538

Query: 627 VTYTTLMKALI 637
           VTY T+ + ++
Sbjct: 539 VTYDTIKEGMM 549



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 14/249 (5%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P++F  +R+L+            +  K      V PD   +N++I    K   L  A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR---AEELFEEMQERGYFPCTTTYNIMIN 518
               + + G+ P  +T+NT+ID + K GR  R    + L +EM E G  P   T+N+++N
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +        R+   M+ QG+  +VVTY+ LV  +G          C EG  ++ V  
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV--WGL---------CSEGKVEEGVKL 315

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M+  GL P+   LNS++N F +     +A   +  M++  +KP+VVTYT L+    R
Sbjct: 316 VDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRR 375

Query: 639 VDKFHKVFS 647
           +DK     +
Sbjct: 376 LDKMKDALA 384


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 240/535 (44%), Gaps = 36/535 (6%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQ--R 188
           L+K LC++   ID A  V + + +   C      Y++L+  L +  ++ EA  LL +   
Sbjct: 167 LIKGLCAAGR-IDDACRVFAKMSR-GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           + + P  +TYNALI    +    +    L+ KM    +  D   Y+ V+  L +  K+  
Sbjct: 225 KGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGH 284

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               K+  E     + L+    N +I G+ K GD   A+  L + +   ++P   T+  V
Sbjct: 285 G--AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I      G+  +A A   ++  +GL P T  +N+L+ G   +G  K A  ++  ME  GV
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           LPD  TY++ IDA  + G+ E A  +   + +   K ++ IY+ ++ GY   G+    F 
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           ++++M S    PD H YN +ID   K   L  A+   D+M  +GIEP T T+N LI    
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMI--NLLGEQERWEDVKRLLGNMRAQGLLPN 544
              ++  A +++E+M   G  P   TY + I  +      + E++   +  M   G+ P+
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPD 582

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS----NLALNSLINA 600
           V TY  ++  Y  +           GL ++A  A   M +  + P     ++ LN + N 
Sbjct: 583 VETYNAIIKAYVDA-----------GLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNK 631

Query: 601 FGEDQRDAEAF----------AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
              D  D E             + + M E+   P + TY  L++ L    +  +V
Sbjct: 632 DDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEV 686



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 200/464 (43%), Gaps = 33/464 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQK 251
           TYN LI+A  +   L  A   + +MR+ G   D   Y+ ++  L R   + ++    +Q 
Sbjct: 92  TYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM 151

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITAL 310
             +   C     D      +I G   AG    A R F  M++G    P   TY  ++  L
Sbjct: 152 PRRWGAC----YDRYSYTILIKGLCAAGRIDDACRVFAKMSRG-WCRPGVHTYTVLLDGL 206

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
               R  EAEA+  E+   G+ P    YNAL+ G  + G   D   ++ +ME     PD 
Sbjct: 207 CKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDC 266

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ ++      G+      VL E            Y+ ++ GY   G+ +    VL+ 
Sbjct: 267 WTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQL 326

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           MK + V P    +N +I  F     +H AMA   +M   G+ P+T+T+N+LI      G 
Sbjct: 327 MKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGE 386

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A  L + M+E G  P   TY I I+ L ++ + E+   L   +  +G+  + V YT+
Sbjct: 387 RKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTS 446

Query: 551 LVDIYGQSGRFDDAIECLEGLS------------------------DQAVNAFRVMRTDG 586
           LV  Y Q G  D A   +E ++                        D+A++    M+  G
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           ++P+    N LI     D++ A+A  + + M  +G KPD  TYT
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 172/380 (45%), Gaps = 14/380 (3%)

Query: 269 NDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N +++G  +AG  + A   F+ M +  G      +Y  +I  L  +GR  +A  VF ++ 
Sbjct: 129 NCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMS 188

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
               +P    Y  LL G  K+  + +AE ++ EM   GV+P+  TY+ LI      GR++
Sbjct: 189 RGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFD 248

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               +L++ME+    P+ + Y++++ G    G+     +VL E    GV  +   YN +I
Sbjct: 249 DVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALI 308

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-RYDRAEELFEEMQERGY 506
           + + K   +  A+     M    + P   T+N +I   F CG +  +A     +M   G 
Sbjct: 309 NGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIH-GFCCGGKVHKAMAFLTQMAGAGL 367

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P T T+N +I+        +   RLL  M   G+LP+  TY   +D             
Sbjct: 368 SPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDAL----------- 416

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C EG  ++A + F  +   G+K  N+   SL++ + +      AF +++ M      PDV
Sbjct: 417 CDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDV 476

Query: 627 VTYTTLMKALIRVDKFHKVF 646
            TY TL+  L +V +  +  
Sbjct: 477 HTYNTLIDGLCKVKRLDRAI 496



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 237/566 (41%), Gaps = 75/566 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSW-LQKHNL-CYSY-ELLYSILIHA-LGRSEK-LYEAF 183
           +++L+  LC      D+   +    +Q+H+  C++Y ++++ +  H  +G   K L+EA 
Sbjct: 234 YNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA- 292

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            + +   L  LTYNALI+   +  D++ AL+++  M+++  +     ++ VI       K
Sbjct: 293 -IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGK 351

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  ++      ++    +  +    N +I G    G+   A+R L + +  G+ P   TY
Sbjct: 352 VHKAM--AFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           A  I AL + G+  EA ++F  L   G+K     Y +L+ GY ++G +  A  ++ +M  
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF----------------- 406
              +PD HTY+ LID      R + A  +L +M+    +P +                  
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHAD 529

Query: 407 ---IYSRILAGYRDRGEWQRTFQV-----------------LKEMKSSGVEPDTHFYNVM 446
              +Y ++++      +   T ++                 + EM  +GV PD   YN +
Sbjct: 530 AAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAI 589

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD-------------- 492
           I  +        A  A  +MLS  I+PD  T++ L++  + C + D              
Sbjct: 590 IKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN--YMCNKDDSDAFDNEKIWKMVD 647

Query: 493 --RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
               +ELFE+M E    P  +TY  ++  L  Q R E+V+ LL  M+   +L +      
Sbjct: 648 VRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY 707

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  Y     + +A E            FR M     +P   +   L++   +      A
Sbjct: 708 LLGCYCNLEMYREACE-----------QFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMA 756

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKAL 636
            ++   M   G   D V +  L+  L
Sbjct: 757 VSIFSDMLGLGYNYDEVVWKLLIDCL 782



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 150/354 (42%), Gaps = 12/354 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKD 353
           GL+P T TY  ++  L  +G    A  +F ++ +  G      +Y  L+KG    G + D
Sbjct: 120 GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDD 179

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V ++M R    P  HTY++L+D      R   A  +L EM      PN   Y+ ++ 
Sbjct: 180 ACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIG 239

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    G +    ++L++M+     PD   Y  ++    K+  + H        + +G+  
Sbjct: 240 GLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVAL 299

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + +T+N LI+ + K G    A ++ + M+     P   T+N +I+      +       L
Sbjct: 300 EVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFL 359

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M   GL PN VT+ +L+     SG      +C  G    A+    +M   G+ P    
Sbjct: 360 TQMAGAGLSPNTVTFNSLI-----SG------QCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
               I+A  ++ +  EA ++   +   G+K   V YT+L+    +V      F 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 32/379 (8%)

Query: 302 TYAAVITALSNSG----RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           ++ A + A S+ G    R     A F  + +SG  P    YN L+  + K+  L DA   
Sbjct: 53  SHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAA 112

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGYR 416
           +  M  +G+ PD  TY+ L+     AG   +A  +  +M     A  + + Y+ ++ G  
Sbjct: 113 LVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLC 172

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G      +V  +M      P  H Y V++D   K   +  A A    M+++G+ P+ +
Sbjct: 173 AAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVV 232

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N LI    + GR+D   +L E+M+ + + P   TY  +++ L +  +     ++L   
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLS 572
             +G+   V+TY  L++ Y + G    A++                        C  G  
Sbjct: 293 IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKV 352

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A+     M   GL P+ +  NSLI+          A  +L  M+E G+ PD  TY   
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412

Query: 633 MKALI---RVDKFHKVFSS 648
           + AL    ++++ H +FS 
Sbjct: 413 IDALCDEGQLEEAHSLFSC 431



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/411 (20%), Positives = 165/411 (40%), Gaps = 65/411 (15%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
             L E Y  +P    +++  +       ++ A+++ S L    +  ++ ++Y+ L+H   
Sbjct: 394 LDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI-KAHNVIYTSLVHGYC 452

Query: 175 RSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +   +  AF L ++   +   P   TYN LI    +   L++A++L+ KM++ G      
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTC 512

Query: 230 NYSLVIQSL--------------------------TRTNKIDSSLLQKLYKE--IECDKI 261
            ++++I+ +                          T T KI +   +   KE  I+   +
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572

Query: 262 EL-------DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+       D +  N +I  +  AG   KA         V + P   TY+ ++  + N  
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632

Query: 315 -----------RTIEA---EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
                      + ++    + +FE++ ES   P    Y ALL+G      L++ E+++ +
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLK 692

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+ + +L DE     L+  Y N   +  A    + M     +P       +L+G  D G+
Sbjct: 693 MQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGD 752

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH---HAMAAFDRMLS 468
                 +  +M   G   D   + ++ID      CLH   HA A  + MLS
Sbjct: 753 HGMAVSIFSDMLGLGYNYDEVVWKLLID------CLHEKGHAGACLE-MLS 796


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 210/471 (44%), Gaps = 32/471 (6%)

Query: 196 YNALISACARNDDLEKALNLMS--KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           YNA+++   R   +E A  L +   +  + Y      Y  V++ L    +I  +L   + 
Sbjct: 87  YNAMVAGYCRVGQVEAARRLAAAVPVPPNAY-----TYFPVVRGLCGRGRIADAL--AVL 139

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+          + + +I    ++G  S A+R L      G +  T     VI A+ + 
Sbjct: 140 DEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQ 199

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV----------VSEMER 363
           G   E   +  +L   G +    +YNA+LKG        D E +          +S+M +
Sbjct: 200 GCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQ 259

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD   Y+ +ID     G  E A  +L  M     KPN   Y+ +L G      W++
Sbjct: 260 HGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEK 319

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L EM       D   +N+++D F +   +   +   ++ML  G  PD IT+ T+I+
Sbjct: 320 AEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G  D A  L + M   G  P T +Y I++  L   ERW D + L+  M  QG LP
Sbjct: 380 GFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLP 439

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N VT+ T+++             C +GL +QA+   + M  +G  P  ++ +++I+  G+
Sbjct: 440 NPVTFNTIINFL-----------CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             +  EA  +L  M   G+ P+V+TY+++  AL R  +  KV    +F NI
Sbjct: 489 AGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ--MFDNI 537



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 207/455 (45%), Gaps = 25/455 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  Y+ +I +  R+     AL ++  +   G   D  N +LVI ++     +D  L  ++
Sbjct: 151 PPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGL--EM 208

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKA---GDASKAMRFL--------GMAQGVGLSPKTA 301
            +++     E D    N V+ G   A   GD  + M  +         MAQ  G +P   
Sbjct: 209 LRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH-GCTPDIR 267

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            YA +I  +   G    A  +   +   GLKP    YN +LKG       + AE +++EM
Sbjct: 268 MYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEM 327

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            +     D+ T+++L+D +   G  +    +L++M      P+   Y+ ++ G+   G  
Sbjct: 328 YQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 387

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +LK M S G +P+T  Y +++           A     RM+ +G  P+ +T+NT+
Sbjct: 388 DEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTI 447

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+   K G  ++A EL ++M   G  P   +Y+ +I+ LG+  + E+   LL  M  +G+
Sbjct: 448 INFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 507

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNV+TY+++     + GR D  I+  + + D  + +  V+            N++I++ 
Sbjct: 508 TPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVL-----------YNAVISSL 556

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            + +    A   L YM  NG  P+  TYT L+K L
Sbjct: 557 CKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGL 591



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 135/626 (21%), Positives = 250/626 (39%), Gaps = 58/626 (9%)

Query: 4   LPPQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQND 63
           LPP       P +  + P T+      PA S+ST   ++  TA G  S   S+       
Sbjct: 14  LPP-------PTLPGSKPATKPKP--APATSISTAATVSADTAVGGGSGRLSALIRS--- 61

Query: 64  TEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEF--KLAESY 121
                      L +  +  D    L+     +     +A+ +    + +VE   +LA   
Sbjct: 62  -----------LCVAGRTADAVRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAA-- 108

Query: 122 RAVPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
            AVP P     +  +++ LC      D A AV+  +   + C     +Y ++I +  RS 
Sbjct: 109 -AVPVPPNAYTYFPVVRGLCGRGRIAD-ALAVLDEMTSRS-CVPIPPMYHVIIESACRSG 165

Query: 178 KLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
               A      L ++   L     N +I+A      +++ L ++ K+   G   D ++Y+
Sbjct: 166 GYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYN 225

Query: 233 LVIQSLTRTNKIDS--SLLQKLYK------EIECDKIELDGQLLNDVIVGFAKAGDASKA 284
            V++ L    +      L+ ++ K      ++       D ++   +I G  K G    A
Sbjct: 226 AVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              L      GL P    Y  V+  + ++ R  +AE +  E+ +         +N L+  
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + + G +     ++ +M   G +PD  TY+ +I+ +   G  + A ++LK M     KPN
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
           +  Y+ +L G      W    +++  M   G  P+   +N +I+   K   +  A+    
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           +ML  G  PD I+++T+ID   K G+ + A EL   M  +G  P   TY+ M   L  + 
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R + V ++  N++   +  + V Y  ++              C    +D A++    M +
Sbjct: 526 RIDKVIQMFDNIQDATIRSDAVLYNAVISSL-----------CKRRETDLAIDFLAYMVS 574

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEA 610
           +G  P+     +LI     +    EA
Sbjct: 575 NGCMPNESTYTALIKGLASEGLLCEA 600


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 211/458 (46%), Gaps = 37/458 (8%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           ++  L P   TYN L+ A  +ND ++ A  L  +M   G   D + Y+ ++ SL +  KI
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 245 DSSLLQKLYKEIECDKIELDGQ------LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
           D             D  EL G+      + N +I G  K G    A++ LG     G+ P
Sbjct: 231 D-------------DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              +Y+ +I +L  SG    A A+F ++   G       +  L+KG    G L +A  + 
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW 337

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M + G  P+   Y+ LI    + G  E A  V  +M+ S   PN   YS ++ G+   
Sbjct: 338 KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKS 397

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+     +    M S G  P+   Y  M+D   K +    A +  ++M  EG  P+T+T+
Sbjct: 398 GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTF 457

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NT I      GR + A +L E MQ  G  P  TTYN +++ L    ++E+   L   + A
Sbjct: 458 NTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + L PN+VTY T+  +YG    F  A     G+  +A+  F      G  P ++  N++I
Sbjct: 518 RNLQPNLVTYNTV--LYG----FSRA-----GMMGEALQLFGKALVRGTAPDSITYNTMI 566

Query: 599 NAF---GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A+   G+ +  A+    +  MKE    PD++TYT+L+
Sbjct: 567 HAYCKQGKVKIAAQLVERVSSMKE--WHPDIITYTSLI 602



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/594 (22%), Positives = 252/594 (42%), Gaps = 45/594 (7%)

Query: 52  FSSSSFTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLN 111
            +S+   + ++  +++   + DVL   K   + + +L F S  +NS +    AS+     
Sbjct: 22  LNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTAST----- 76

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL-- 169
                    YR +   L              +D+   ++  ++   +    +L   I+  
Sbjct: 77  ---------YRVMIERL---------GRECEMDMVQYILQQMKMDGINCCEDLFICIING 118

Query: 170 IHALGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCD 227
              +G +E+  + F         P    YN L+ A    +  +    L + M++DG   +
Sbjct: 119 YKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPN 178

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
              Y++++++L + +++D++   KL+ E+       D      ++    KAG    A   
Sbjct: 179 VFTYNILLKALCKNDRVDAA--HKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
            G        P    Y A+I  +   GR   A  +  E+ ++G+ P   +Y+ ++     
Sbjct: 237 AGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G ++ A  + ++M   G   + HT++ LI      G+   A  + K M     +PN   
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G  +   QV  +M+ SG  P+   Y+++ID F K   L  A   ++RM+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           S G  P+ +T+  ++D   K   +D+A  L E+M   G  P T T+N  I  L    R E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
              +LL  M+  G LPN+ TY  L+D   +  ++++A     GL       F+ +    L
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF----GL-------FQEIEARNL 520

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +P+ +  N+++  F       EA  +       G  PD +TY T++ A  +  K
Sbjct: 521 QPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 200/443 (45%), Gaps = 31/443 (6%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y ++I+ L R  ++D  ++Q + ++++ D I     L   +I G+ + G A +A++    
Sbjct: 77  YRVMIERLGRECEMD--MVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYR 134

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G  P    Y  ++ AL +  +      ++  +K+ GL P    YN LLK   K   
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +  A  +  EM   G  PD  TY+ ++ +   AG+ + AR +         KP+  +Y+ 
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G    G  +   ++L EM  +GV+P+   Y+ +I++      +  A A F +M   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            + +  T+  LI   F  G+   A +L++ M + G  P    YN +I+ L      E+  
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
           ++   M+  G LPNV TY+ L+D + +SG    A E                        
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C   + DQA +    M  +G  P+ +  N+ I     + R   A  +L+ M+ +G  P++
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489

Query: 627 VTYTTLMKALIRVDKFHKVFSSY 649
            TY  L+ AL R++K+ + F  +
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLF 512



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 218/508 (42%), Gaps = 49/508 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC  N  +D A+ +   +     C    + Y+ ++ +L ++ K+ +A  L+ R
Sbjct: 182 YNILLKALCK-NDRVDAAHKLFVEMSNKG-CPPDAVTYTTMVSSLCKAGKIDDARELAGR 239

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
            + +   YNALI    +   +E A+ L+ +M  +G   + ++YS +I SL  +  ++ + 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              L+ ++                  F +  DA+                   T+  +I 
Sbjct: 300 --ALFAQM------------------FLRGCDAN-----------------IHTFTPLIK 322

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G+  EA  +++ + + G +P   AYN L+ G    G L++A  V  +M+RSG LP
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TYS+LID +A +G    A      M     +PN   Y+ ++        + +   ++
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M   G  P+T  +N  I        +  AM   +RM   G  P+  T+N L+D  F+ 
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            +Y+ A  LF+E++ R   P   TYN ++          +  +L G    +G  P+ +TY
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            T++  Y + G+   A + +E          RV       P  +   SLI          
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVE----------RVSSMKEWHPDIITYTSLIWGACNWMNIE 612

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           EA A L      G+ P+  T+  L++  
Sbjct: 613 EAMAFLDKAINQGICPNFATWNALVRCF 640



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 173/407 (42%), Gaps = 55/407 (13%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
            P++++L+  +C     I++A  ++  +  + +     + YS +I++L  S  +  AF L
Sbjct: 244 VPVYNALIDGMCKE-GRIEVAIKLLGEMMDNGV-DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             +  L        T+  LI  C     L +AL+L   M QDG   + + Y+ +I  L  
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGVG 295
              ++ +L         CD+++  G L N      +I GFAK+GD   A          G
Sbjct: 362 NGSLEEALQV-------CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   TY  ++  L  +    +A ++ E++   G  P T  +N  +KG    G ++ A 
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++  M+  G LP+  TY+ L+DA     ++E A  + +E+E  + +PN   Y+ +L G+
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN--------------------- 454
              G      Q+  +    G  PD+  YN MI  + K                       
Sbjct: 535 SRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 455 -----------C----LHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
                      C    +  AMA  D+ +++GI P+  TWN L+ C F
Sbjct: 595 IITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 223/458 (48%), Gaps = 27/458 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TYNALI A  R  DL  A   +S M + G+  D   ++ +I    RT ++D +  Q 
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVA--QD 185

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L+ ++       D      +I GF + G   +A+      +     P   T+AA++  L 
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLC 241

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           ++ R  E   + +++KE G +P T+AY AL+  + +    ++AE +++EM  +G++P   
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T + +++AY   GR   A  V + M++   +PN + Y+ ++ G+ + G+  +   +L +M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLH-HAMAAFDRML----SEGIEPDTITWNTLIDCHF 486
           +  GVEPD   YN++I    +  C+  H  +AF R+L      G+  D  T+N LID   
Sbjct: 362 RECGVEPDVVTYNLLI----RGQCIDGHIESAF-RLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+ D A  LF+ ++ RG  P + T+N +IN L +  +++     L  M + G  P+  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY+  ++             C    S + ++    M    +KPS +    +I+   +++ 
Sbjct: 477 TYSPFIENL-----------CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              A  +   M   G  PDVVTYTT ++A     + H+
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 222/504 (44%), Gaps = 57/504 (11%)

Query: 166 YSILIHALGRSEKL-----YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL R   L     Y + ++    R    T+N+LI    R   L+ A +L  KM 
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D ++Y+ +I+    T ++D +L  +L++E+E   +     L+     G   A  
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEAL--ELFRELEQPDMYTHAALVK----GLCDARR 245

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             + +  L   + +G  P T  YAA++       +  EAE +  E+ ++GL P      A
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y + G +  A  V   M+  G  P+  TY+ ++  + N G+   A  +L +M    
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   Y+ ++ G    G  +  F++L+ M+ +G+  D + YNV+ID   K   +  A 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE--------------------- 499
           + FD +   GI P+++T+NT+I+   K G++D A    E                     
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485

Query: 500 --------------EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                         EM ++   P T  Y I+I+ L ++  +    R+ G M + G  P+V
Sbjct: 486 CKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDV 545

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTYTT V  Y           C EG   +A N    M+  G+    +A N+LI+      
Sbjct: 546 VTYTTSVRAY-----------CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIG 594

Query: 606 RDAEAFAVLQYMKENGLKPDVVTY 629
           +   A  +L++M      P+  T+
Sbjct: 595 KTDHAVTILKHMTGVASMPNHFTF 618



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 15/346 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P  ATY A+I AL        A+     +  SG +P    +N+L+ GY +   L  A+ 
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  +M   G   D  +Y+ LI+ +   GR + A  + +E+E    +P+ + ++ ++ G  
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLC 241

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           D    +    +L++MK  G  P T  Y  ++D + +      A    + M   G+ P  +
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T   +++ + + GR   A  +FE M+ +G  P   TYN M+       +      LL  M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           R  G+ P+VVTY  L  I GQ         C++G  + A    R+M  +GL       N 
Sbjct: 362 RECGVEPDVVTYNLL--IRGQ---------CIDGHIESAFRLLRLMEGNGLAADQYTYNV 410

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           LI+A  +  +  EA ++   ++  G++P+ VT+ T++  L +  KF
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 139/593 (23%), Positives = 248/593 (41%), Gaps = 34/593 (5%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHS--- 131
           L + +  +D  PL  F   + ++ S +AL        RV+  L E +R +  P  ++   
Sbjct: 180 LDVAQDLFDKMPLRGF---SQDAVSYAALIEGFCETGRVDEAL-ELFRELEQPDMYTHAA 235

Query: 132 LLKNLCSSNSSIDLAYAV-----VSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLL 185
           L+K LC +    +  Y +     + W             Y+ L+    R +K  EA  +L
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRA-------YAALVDLWCREQKAEEAEKML 288

Query: 186 SQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           ++     L P  +T  A+++A  R   +  A+ +   M+  G   +   Y+ ++Q     
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            K+  ++   L +  EC  +E D    N +I G    G    A R L + +G GL+    
Sbjct: 349 GKVYKAM-ALLDQMRECG-VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQY 406

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I AL  +G+  EA ++F+ L+  G++P +  +N ++ G  K G    A   + +M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +G  PD +TYS  I+              + EM     KP++  Y+ ++        +
Sbjct: 467 VSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNY 526

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++  +M S G  PD   Y   +  +     LH A      M   GI  D + +NTL
Sbjct: 527 GLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTL 586

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID H   G+ D A  + + M      P   T+ I++  L ++   EDV     ++     
Sbjct: 587 IDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIE 646

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-----DQAVNAFRVMRTDGLKPSNLALNS 596
           L +V     L+            +  LEG S     D+  +    M+ D L  +     S
Sbjct: 647 LADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTS 706

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           L+N F + +   +A+A+L  M  +G  P++++Y  L+       + D+  ++F
Sbjct: 707 LVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 198/493 (40%), Gaps = 36/493 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++       K+Y+A  L  + R   + P  +TYN LI     +  +E A  L+  M 
Sbjct: 338 YNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLME 397

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D   Y+++I +L +T K+D +    L+  +E   I  +    N VI G  K G 
Sbjct: 398 GNGLAADQYTYNVLIDALCKTGKVDEAC--SLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A  FL      G +P T TY+  I  L  +  + E  +  +E+ +  +KP T  Y  
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTI 515

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K      A  +  +M   G  PD  TY+  + AY N GR   A  V+ EM+   
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY---------------NV 445
              ++  Y+ ++ G+   G+      +LK M      P+ HF                +V
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN-HFTFFILLRHLLQRRLAEDV 634

Query: 446 MIDTFGKYNCLHHA--MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            + T   +  +  A     F+ M    +      +  +++   +  R D    L   M+E
Sbjct: 635 PLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE 694

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
                    Y  ++N   +   + D   LL +M   G LPN+++Y  L+  +   G+ D 
Sbjct: 695 DDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR 754

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A E   GL  +  N   ++         + ++ LI   G      +  ++L+ MK    K
Sbjct: 755 AKEIFRGLRWKEYNTDEIV-------WKIIIDGLIRQ-GHPDMCHDMISILEQMK---CK 803

Query: 624 PDVVTYTTLMKAL 636
           P   TY  L + L
Sbjct: 804 PSDETYAMLTEEL 816



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 16/349 (4%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA-YNALLKGYVKMGYLKDAEFVVSE 360
           T+ +++T  S    T     +F  +   G    T A YNAL++   +   L+ A+  +S 
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M RSG  PD  T++ LI  Y    + + A+ +  +M +     ++  Y+ ++ G+ + G 
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +E++    +PD + +  ++            +    +M   G  P T  +  
Sbjct: 215 VDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+D   +  + + AE++  EM + G  PC  T   ++N    + R     R+  +M+ +G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
             PNV TY  +V  +   G+   A+     L DQ       MR  G++P  +  N LI  
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAM----ALLDQ-------MRECGVEPDVVTYNLLIRG 379

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              D     AF +L+ M+ NGL  D  TY  L+ AL +  K  +  S +
Sbjct: 380 QCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 170/452 (37%), Gaps = 66/452 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----S 186
           L++  C  +  I+ A+ ++  ++ + L  + +  Y++LI AL ++ K+ EA  L      
Sbjct: 376 LIRGQCI-DGHIESAFRLLRLMEGNGLA-ADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +  R   +T+N +I+   +    + A   + KM   G   D   YS  I++L +T     
Sbjct: 434 RGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSRE 493

Query: 247 SLL---QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            L    + L K+++   +         VI    K  +   A R  G    +G SP   TY
Sbjct: 494 GLSFIDEMLQKDVKPSTVNY-----TIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTY 548

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
              + A  N GR  EAE V  E+K+ G+     AYN L+ G+  +G    A  ++  M  
Sbjct: 549 TTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTG 608

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARI----VLKEMEVSHA-------KPNSF-----I 407
              +P+  T+ +L+         E   +    V K +E++         K NS       
Sbjct: 609 VASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARA 668

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  IL G+ +         ++  MK   +  +   Y  +++ F K      A A    M+
Sbjct: 669 YLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMI 728

Query: 468 SEGIEP-----------------------------------DTITWNTLIDCHFKCGRYD 492
             G  P                                   D I W  +ID   + G  D
Sbjct: 729 GHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPD 788

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
              ++   +++    P   TY ++   L  +E
Sbjct: 789 MCHDMISILEQMKCKPSDETYAMLTEELSTRE 820


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 243/524 (46%), Gaps = 24/524 (4%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           +L N+C         +D+A+     ++   L    ++ Y+ LI  L ++ +L EA  L +
Sbjct: 274 VLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPD-DVTYTTLIGVLCKARRLDEAVELFE 332

Query: 188 R---QRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
                R  P  Y  N +I         ++A +L+ + ++ G     I Y+ ++  L R  
Sbjct: 333 ELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 392

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K++ +L  +++ E+  D    +    N +I    KAG+   A++     +  GL P   T
Sbjct: 393 KVEEAL--RIHDEMRQDAAP-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              +I  L  + +  EA ++F  L      P ++ + +L+ G  + G + DA  +  +M 
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            S  +P+   Y+ LI  +   GR E    + KEM      P+  + +  +      GE +
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + +E+K+ G+ PD   Y+++I    K          F  M  +G+  D + +NT+I
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+ D+A +L EEM+ +G  P   TY  +++ L + +R ++   L    ++ G+ 
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   LE L  +           GL P++   N L++A  
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNSYTWNCLLDALV 738

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MK     P+ +TY+ ++  L  + KF+K F
Sbjct: 739 KAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 232/524 (44%), Gaps = 57/524 (10%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMRQDG 223
           L+ +  +S KL EAF + +  R     P    Y  LI A +  +  +  L L  +M++ G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y  +   ++ +++   R  +ID++L   L  E++ +    D  L N  I  F K G    
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAAL--SLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDM 291

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   TY  +I  L  + R  EA  +FEEL  +   P   AYN ++ 
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIM 351

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY   G   +A  ++   +R G +P    Y+ ++      G+ E A  +  EM    A P
Sbjct: 352 GYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAP 410

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++      GE +   +V   MK +G+ P+    N+MID   K   L  A + F
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470

Query: 464 -----------------------------------DRMLSEGIEPDTITWNTLIDCHFKC 488
                                              ++ML     P+ + + +LI   FKC
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR +   ++++EM  RG  P     N  ++ + +    E  + L   ++AQGL+P+V +Y
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           + L+    ++           G S +    F  M+  GL    LA N++I+ F +  +  
Sbjct: 591 SILIHGLVKA-----------GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVD 639

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           +A+ +L+ MK  GL+P VVTY +++  L ++D+  +   +Y+ F
Sbjct: 640 KAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE---AYMLF 680



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/535 (22%), Positives = 238/535 (44%), Gaps = 21/535 (3%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           R+VP    ++ +     S    D AY+++   QK   C    + Y+ ++  LGR  K+ E
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLER-QKRKGCIPSVIAYNCILTCLGRKGKVEE 396

Query: 182 AFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           A  +    RQ   P   TYN LI    +  +LE AL +   M++ G   + +  +++I  
Sbjct: 397 ALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L +  K+D +    ++  ++      D +    +I G  + G    A             
Sbjct: 457 LCKAQKLDEAC--SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQI 514

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y ++I      GR  +   +++E+   G  P     N+ +    K G ++    +
Sbjct: 515 PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRAL 574

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             E++  G++PD  +YS+LI     AG       +  EM+      +   Y+ ++ G+  
Sbjct: 575 FEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCK 634

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+  + +Q+L+EMK+ G++P    Y  ++D   K + L  A   F+   S G++ + + 
Sbjct: 635 SGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVI 694

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +++LID   K GR D A  + EE+ ++G  P + T+N +++ L + E  ++ +    NM+
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
                PN +TY+ +++      +F           ++A   ++ M+  GLKP+N+   ++
Sbjct: 755 NLKCSPNAMTYSIMINGLCMIRKF-----------NKAFVFWQEMQKQGLKPNNITYTTM 803

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           I    +     EA  +    K +G  PD   Y  +++ L      +K   +Y+ F
Sbjct: 804 IAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL---SSANKAMDAYIVF 855



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 194/436 (44%), Gaps = 44/436 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           ++  LC +   +D A ++   L  H +C      +  LI  LGR  ++ +A+     +L 
Sbjct: 453 MIDRLCKAQK-LDEACSIFLGLD-HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510

Query: 187 QRQRLTPLTYNALIS---ACARNDD--------------------------------LEK 211
             Q    + Y +LI     C R +D                                +EK
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
              L  +++  G   D  +YS++I  L +     S    KL+ E++   + LD    N V
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGF--SRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I GF K+G   KA + L   +  GL P   TY +V+  L+   R  EA  +FEE K  G+
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
                 Y++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+DA   A   + A++
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQV 748

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
             + M+     PN+  YS ++ G     ++ + F   +EM+  G++P+   Y  MI    
Sbjct: 749 CFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLA 808

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A   FDR  + G  PD+  +N +I+      +   A  +FEE + +G    + 
Sbjct: 809 KAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSK 868

Query: 512 TYNIMINLLGEQERWE 527
           T  ++++ L + +  E
Sbjct: 869 TCVVLLDALHKADCLE 884



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/425 (21%), Positives = 192/425 (45%), Gaps = 18/425 (4%)

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           HC  + Y+  +  + RT  +D   L+++ +E+      L   +  +++  F K+    +A
Sbjct: 131 HCPEV-YNAFLMVMARTRNLD--YLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEA 187

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              + M +     P  + Y  +I ALS + R      +F +++E G +     +  L++ 
Sbjct: 188 FGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRV 247

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + + G +  A  ++ EM+ +    D   Y++ ID +   G+ + A     EM+     P+
Sbjct: 248 FAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPD 307

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ ++             ++ +E+  +   P  + YN MI  +G       A +  +
Sbjct: 308 DVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLE 367

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           R   +G  P  I +N ++ C  + G+ + A  + +EM++    P  TTYNI+I++L +  
Sbjct: 368 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYNILIDMLCKAG 426

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
             E   ++   M+  GL PN++T   ++D   ++ + D+A     GL  +  +       
Sbjct: 427 ELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCS------- 479

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDK 641
               P +    SLI+  G   R  +A+++ + M ++   P+VV YT+L++      R + 
Sbjct: 480 ----PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED 535

Query: 642 FHKVF 646
            HK++
Sbjct: 536 GHKIY 540



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 12/349 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y A +  ++ +      E + EE+  +G          L+  +VK   LK+A  V+  M
Sbjct: 135 VYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            +    P    Y+ LI A + A R +    +  +M+    + N  +++ ++  +   G  
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +L EMKS+    D   YNV ID FGK   +  A   F  M ++G+ PD +T+ TL
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    K  R D A ELFEE+      PC   YN MI   G   ++++   LL   + +G 
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +P+V+ Y  ++   G+ G+ ++A+     + D+       MR D   P+    N LI+  
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALR----IHDE-------MRQDA-APNLTTYNILIDML 422

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            +      A  V   MKE GL P+++T   ++  L +  K  +  S +L
Sbjct: 423 CKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 12/280 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++   C S   +D AY ++  ++   L  +  + Y  ++  L + ++L EA++L + 
Sbjct: 625 YNTVIDGFCKS-GKVDKAYQLLEEMKTKGLQPTV-VTYGSVVDGLAKIDRLDEAYMLFEE 682

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +     L  + Y++LI    +   +++A  ++ ++ Q G   +   ++ ++ +L +  +
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +  Q  ++ ++  K   +    + +I G       +KA  F    Q  GL P   TY
Sbjct: 743 IDEA--QVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITY 800

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L+ +G  +EA  +F+  K SG  P +  YNA+++G        DA  V  E   
Sbjct: 801 TTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRL 860

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARI---VLKEMEVSH 400
            G   +  T  +L+DA   A   E A I   VL+EM  S 
Sbjct: 861 KGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQ 900


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 212/448 (47%), Gaps = 17/448 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           +N L+SA A+    +  ++L  KM++ G   +   Y+++I    R ++I  +L  L K+ 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K      I     LLN    G+      S A+  +     +G  P T T+  +I  L   
Sbjct: 73  KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA A+ + + + G +P    Y  ++ G  K G +  A  ++++ME + +  D   +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +ID+       + A  + KEME    +PN   YS +++     G W    Q+L +M  
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   +N +ID F K      A    D M+   I+PD  T+N+LI+      R D+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++FE M  +  FP   TYN +I    + +R ED   L   M  +GL+ + VTYTTL+ 
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI- 367

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                G F D      G  D A   F+ M +DG+ P  +  + L++    + +  +A  V
Sbjct: 368 ----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
             YM+++ +K D+  YTT+++ + +  K
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGK 445



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 244/528 (46%), Gaps = 31/528 (5%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQK----HNLCYSYELLYSILIHALGRSE 177
           R +P+    + L +  +     DL  ++   +Q+    HNL Y+Y    +ILI+   R  
Sbjct: 5   RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL-YTY----NILINCFCRRS 59

Query: 178 KLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           ++  A  LL +  +L    + +T ++L++       +  A+ L+ +M + GY  D I ++
Sbjct: 60  QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119

Query: 233 LVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
            +I  L   NK   +  L+ ++ +      +   G ++N    G  K GD   A   L  
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN----GLCKRGDIDLAFNLLNK 175

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +   +      +  +I +L       +A  +F+E++  G++P    Y++L+      G 
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
             DA  ++S+M    + P+  T++ LIDA+   G++  A  +  +M      P+ F Y+ 
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+       +  Q+ + M S    PD   YN +I  F K   +      F  M   G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           +  DT+T+ TLI   F  G  D A+++F++M   G  P   TY+I+++ L    + E   
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +   M+   +  ++  YTT+++   ++G+ DD  +    LS             G+KP+
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-----------LKGVKPN 464

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  N++I+     +   EA+A+L+ MKE+G  PD  TY TL++A +R
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 233/496 (46%), Gaps = 23/496 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S I LA A++  + K  L Y   ++  S L++     +++ +A  L  +
Sbjct: 48  YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 R   +T+  LI     ++   +A+ L+ +M Q G   + + Y +V+  L +   
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID +    L  ++E  KIE D  + N +I    K      A+      +  G+ P   TY
Sbjct: 166 IDLAF--NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I+ L + GR  +A  +  ++ E  + P    +NAL+  +VK G   +AE +  +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TY+ LI+ +    R + A+ + + M      P+   Y+ ++ G+      + 
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMID-TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++ +EM   G+  DT  Y  +I   F   +C  +A   F +M+S+G+ PD +T++ L+
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILL 402

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D     G+ ++A E+F+ MQ+         Y  MI  + +  + +D   L  ++  +G+ 
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PNVVTY T++     SG       C + L  +A    + M+ DG  P +   N+LI A  
Sbjct: 463 PNVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511

Query: 603 EDQRDAEAFAVLQYMK 618
            D   A +  +++ M+
Sbjct: 512 RDGDKAASAELIREMR 527



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 179/401 (44%), Gaps = 8/401 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P  + + ++ N       IDLA+ +++ ++   +  +  ++++ +I +L +   + +A  
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIFNTIIDSLCKYRHVDDALN 206

Query: 185 L-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L     ++  R   +TY++LIS          A  L+S M +   + + + ++ +I +  
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K   +  +KL+ ++    I+ D    N +I GF       KA +           P 
Sbjct: 267 KEGKFVEA--EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I     S R  +   +F E+   GL   T  Y  L++G    G   +A+ V  
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M   GV PD  TYS+L+D   N G+ E A  V   M+ S  K + +IY+ ++ G    G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +    + +   +   GV+P+   YN MI        L  A A   +M  +G  PD+ T+N
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           TLI  H + G    + EL  EM+   +    +T  ++ N+L
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 20/320 (6%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           P    +N LL    KM   K  + V+S   +M+R G+  + +TY++LI+ +    +   A
Sbjct: 8   PSIFEFNKLLSAIAKM---KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L +M     +P+    S +L GY           ++ +M   G  PDT  +  +I  
Sbjct: 65  LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
              +N    A+A  DRM+  G +P+ +T+  +++   K G  D A  L  +M+       
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              +N +I+ L +    +D   L   M  +G+ PNVVTY++L+      GR+ DA + L 
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            + ++ +N           P+ +  N+LI+AF ++ +  EA  +   M +  + PD+ TY
Sbjct: 245 DMIEKKIN-----------PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293

Query: 630 TTLMKALI---RVDKFHKVF 646
            +L+       R+DK  ++F
Sbjct: 294 NSLINGFCMHDRLDKAKQMF 313



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 11/282 (3%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M +S  LP    ++ L+ A A   +++    + ++M+      N + Y+ ++  +  R +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L +M   G EP     + +++ +     +  A+A  D+M+  G  PDTIT+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI   F   +   A  L + M +RG  P   TY +++N L ++   +    LL  M A  
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           +  +VV + T++D   +    DDA+           N F+ M T G++P+ +  +SLI+ 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDAL-----------NLFKEMETKGIRPNVVTYSSLISC 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
                R ++A  +L  M E  + P++VT+  L+ A ++  KF
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 234/519 (45%), Gaps = 19/519 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           +L+ L   +++ID+A  V + + +  +C +  + Y+ ++ +  +   + EA  LL Q Q 
Sbjct: 172 VLRLLRDRDNNIDVAREVYNVMVECGICPTV-VTYNTMLDSFCKKGMVQEALQLLFQMQA 230

Query: 191 L--TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +  +P  +TYN L++  + + ++E+A  L+  M + G       Y  +I+      +I+ 
Sbjct: 231 MGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEE 290

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   +L +E+            N ++ G  K G  S A + L +     L P   +Y  +
Sbjct: 291 A--SRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 348

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I   +  G   EA  +F EL+   L P    YN L+ G  ++G L  A  +  EM + G 
Sbjct: 349 IYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGP 408

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  T++  +  +   G    A+ +  EM     +P+ F Y   + G    G+  + F 
Sbjct: 409 DPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFG 468

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + +EM + G  PD   YNV ID   K   L  A     +ML  G+ PD +T+ ++I  H 
Sbjct: 469 MQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHL 528

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G   +A  LF EM  +G FP   TY ++I+    + R +        M  +G+ PNV+
Sbjct: 529 MAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 588

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L++   +  + D           QA N F  M+  G+ P+      LIN       
Sbjct: 589 TYNALINGLCKVRKMD-----------QAYNFFAEMQAKGISPNKYTYTILINENCNLGH 637

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             EA  + + M +  ++PD  T+ +L+K L +  K H V
Sbjct: 638 WQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVV 676



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 213/480 (44%), Gaps = 55/480 (11%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLT-RTNKIDSSLLQKLYK-EIECDKIELDGQ 266
           LEK L +  KM   G   D  N + V++ L  R N ID +  +++Y   +EC  I     
Sbjct: 147 LEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVA--REVYNVMVECG-ICPTVV 203

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N ++  F K G   +A++ L   Q +G SP   TY  ++  LS+SG   +A+ + +++
Sbjct: 204 TYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM 263

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              GL+     Y+ L++GY + G +++A  +  EM   G +P   TY+ ++      GR 
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             AR +L  M   +  P+   Y+ ++ GY   G     F +  E++   + P    YN +
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 447 IDT-----------------------------------FGKYNCLHHAMAAFDRMLSEGI 471
           ID                                    F K   L  A   FD ML+ G+
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD   + T I    K G   +A  + EEM  RG+ P   TYN+ I+ L +    ++   
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 503

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L+  M   GL+P+ VTYT+++  +  +G              +A   F  M + G+ PS 
Sbjct: 504 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHL-----------RKARALFLEMLSKGIFPSV 552

Query: 592 LALNSLINAFGEDQRDAEAFAVLQY--MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +    LI+++    R     A+L +  M E G+ P+V+TY  L+  L +V K  + ++ +
Sbjct: 553 VTYTVLIHSYA--VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFF 610



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 209/472 (44%), Gaps = 44/472 (9%)

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYK--------------EIECDKIEL 263
           RQ G+    I+YS+++  L R   + S+  +++K+                E+    ++L
Sbjct: 73  RQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKL 132

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAV 322
              +L+ ++  + K     K +         GL P       V+  L +    I+ A  V
Sbjct: 133 ---ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREV 189

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           +  + E G+ P    YN +L  + K G +++A  ++ +M+  G  P++ TY++L++  ++
Sbjct: 190 YNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSH 249

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G  E A+ ++++M     + + + Y  ++ GY ++G+ +   ++ +EM S G  P    
Sbjct: 250 SGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVT 309

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN ++    K+  +  A    D M+++ + PD +++NTLI  + + G    A  LF E++
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            R   P   TYN +I+ L      +   RL   M   G  P+V T+TT V  + + G   
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429

Query: 563 DAIECLEGLSDQAVNAFRV------------------------MRTDGLKPSNLALNSLI 598
            A E  + + ++ +   R                         M   G  P  +  N  I
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +   +     EA  +++ M  NGL PD VTYT+++ A +      K  + +L
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFL 541



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 197/490 (40%), Gaps = 59/490 (12%)

Query: 59  SKQNDTEEEEEDDDDVL--SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFK 116
           S   + E+ +E   D+L   L+   Y + PL+    E    E AS L     S       
Sbjct: 248 SHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRG----- 302

Query: 117 LAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
                 AVP  + +++++  LC      D A  ++  +   NL     + Y+ LI+   R
Sbjct: 303 ------AVPTVVTYNTIMYGLCKWGRVSD-ARKLLDVMVNKNLMPDL-VSYNTLIYGYTR 354

Query: 176 SEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
              + EAFLL    R   L P  +TYN LI    R  DL+ A+ L  +M + G   D   
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFT 414

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           ++  ++                                     GF K G+   A      
Sbjct: 415 FTTFVR-------------------------------------GFCKMGNLPMAKELFDE 437

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P    Y   I      G   +A  + EE+   G  P    YN  + G  K+G 
Sbjct: 438 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 497

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           LK+A  +V +M  +G++PD  TY+ +I A+  AG    AR +  EM      P+   Y+ 
Sbjct: 498 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTV 557

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++  Y  RG  +       EM   GV P+   YN +I+   K   +  A   F  M ++G
Sbjct: 558 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I P+  T+  LI+ +   G +  A  L+++M +R   P + T+  ++  L +  +   V 
Sbjct: 618 ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH-VV 676

Query: 531 RLLGNMRAQG 540
           R L N+ A G
Sbjct: 677 RHLENVIAAG 686


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 225/482 (46%), Gaps = 45/482 (9%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +LS+    T  T+  ++ A    ++++ A +L+  M + G   + I Y ++I +L+  N+
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-----------GMAQ 292
           ++ ++  KL +E+     E D Q  NDVI G  KAG   +A +              + Q
Sbjct: 251 VNEAM--KLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308

Query: 293 GV---GL-----------------SPKTATYAAVITALSNSGRTIEA-EAVFEELKESGL 331
           G    GL                 +P T  Y  +I     SGR  EA + +++ +  +G 
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    +N ++ G  K GYL  A   + EM + G  P+  TY++LID +   G +E A  
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           V+  M       N+  Y+ ++      G+ Q   Q+  EM S G +PD + +N +I    
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K + +  A+  +  ML EG+  +T+T+NTLI    +     +A++L  EM+ RG      
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNI 548

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN +I  L +    E    L+  M  + + P++ +   L++ + ++G+ +DA++ L   
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL--- 605

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                   R M   GL P  +  NSLIN   +  R  EA  +   ++  G+ PD VTY T
Sbjct: 606 --------RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657

Query: 632 LM 633
           L+
Sbjct: 658 LI 659



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 221/519 (42%), Gaps = 50/519 (9%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K  C  N  +D A +++  + KH  C    ++Y +LIHAL  + ++ EA  L +   L
Sbjct: 206 VMKAFCMVNE-VDSACSLLRDMTKHG-CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFL 263

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
                   T+N +I    +   + +A  L  +M    +  D +    ++  L R  K+D 
Sbjct: 264 MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDE 323

Query: 247 S--LLQK----------------------------LYKEIECDKIELDGQLLNDVIVGFA 276
           +  +L K                            LYK +     E D    N +I G  
Sbjct: 324 ARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLC 383

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K G    A+ FL      G  P   TY  +I      G   EA  V   +   GL   T 
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+    K G ++DA  +  EM   G  PD +T++ LI       + E A  + ++M
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +     N+  Y+ ++  +      Q+  +++ EM+  G   D   YN +I    K    
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
              +   ++M  E I P   + N LI+   + G+ + A +   +M +RG  P   TYN +
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL-EGLSDQA 575
           IN L +  R+++   L   ++A+G+ P+ VTY TL+  Y   G F+DA + L +G+S   
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVS--- 680

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                    +G  P+ +  + LIN F ++  D+E F +L
Sbjct: 681 ---------NGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 211/507 (41%), Gaps = 81/507 (15%)

Query: 177 EKLYEAFLLSQRQR-LTPLTYNALISACARNDDLEKALNLMSKMR-QDGYHCDFINYSLV 234
           E L + + L   QR L P+T + L        D+  +++L  K   Q GY   F  Y L+
Sbjct: 41  ENLLKPYDLKHLQRSLNPITPSQLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLL 100

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  L    +    ++ KL K+++ +       L   ++  + KAG   +A R L    GV
Sbjct: 101 IDKLGNVGEF--KMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGV 158

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
                                       FE        P  K+YN +L+  V     K A
Sbjct: 159 --------------------------YCFE--------PTFKSYNVVLEILVAGNCPKVA 184

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             V  +M   G+ P  +T+ +++ A+      +SA  +L++M      PNS IY  ++  
Sbjct: 185 PNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHA 244

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR--------- 465
             +        ++L+EM   G EPD   +N +I    K   +H A    DR         
Sbjct: 245 LSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTAD 304

Query: 466 ----------------------MLSEGIEPDTITWNTLIDCHFKCGRYDRAEE-LFEEMQ 502
                                 MLS+   P+T+ +NTLI+ +   GR++ A++ L++ M 
Sbjct: 305 ALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMV 364

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G+ P   T+NIMI+ L ++         L  M  +G  PNV+TYT L+D + + G F+
Sbjct: 365 IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE 424

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A         + VN+   M   GL  + +  N LI A  +D +  +A  +   M   G 
Sbjct: 425 EA--------SKVVNS---MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGC 473

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
           KPD+ T+ +L+  L + DK  +    Y
Sbjct: 474 KPDIYTFNSLIYGLCKNDKMEEALGLY 500


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 215/468 (45%), Gaps = 19/468 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++ I  L +  +L  A      L+ Q  +   +TYN LI    +N   ++A   + KM 
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D   Y+ +I    +   +   L +++  +   +    D      +I G    G+
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMV--QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A+     A G G+ P    Y  +I  LSN G  +EA  +  E+ E GL P  + +N 
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  KMG + DA+ +V  M   G  PD  T+++LI  Y+   + E+A  +L  M  + 
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ + Y+ +L G     +++   +  K M   G  P+   +N+++++  +Y  L  A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT-TYNIMINL 519
              + M ++ + PD +T+ TLID   K G  D A  LF +M+E      +T TYNI+I+ 
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             E+      ++L   M  + L P+  TY  +VD + ++G  +   + L           
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL----------- 660

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             M  +G  PS   L  +IN    + R  EA  ++  M + GL P+ V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 220/474 (46%), Gaps = 18/474 (3%)

Query: 174 GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           GR  K+ EA  + +R        T  +YNA++S    +   ++A  +  +MR  G   D 
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
            ++++ ++S  +T++  ++L  +L   +     E++      V+ GF +    ++     
Sbjct: 147 YSFTIRMKSFCKTSRPHAAL--RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G     G+S   +T+  ++  L   G   E E + +++ + G+ P    YN  ++G  + 
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L  A  +V  +   G  PD  TY+ LI       +++ A + L +M     +P+S+ Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++AGY   G  Q   +++ +   +G  PD   Y  +ID        + A+A F+  L 
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +GI+P+ I +NTLI      G    A +L  EM E+G  P   T+NI++N L +     D
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L+  M ++G  P++ T+  L+  Y    + ++A+E L+           VM  +G+ 
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD-----------VMLDNGVD 493

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           P     NSL+N   +  +  +     + M E G  P++ T+  L+++L R  K 
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 198/442 (44%), Gaps = 50/442 (11%)

Query: 180 YEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           YE F  +L+    L   T+N L+    +  D+++   L+ K+ + G   +   Y+L IQ 
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L                   C + ELDG                  A+R +G     G  
Sbjct: 261 L-------------------CQRGELDG------------------AVRMVGCLIEQGPK 283

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I  L  + +  EAE    ++   GL+P +  YN L+ GY K G ++ AE +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V +   +G +PD+ TY  LID   + G    A  +  E      KPN  +Y+ ++ G  +
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           +G      Q+  EM   G+ P+   +N++++   K  C+  A      M+S+G  PD  T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LI  +    + + A E+ + M + G  P   TYN ++N L +  ++EDV      M 
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G  PN+ T+  L++   +  + D+A+  LE + +++VN           P  +   +L
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN-----------PDAVTFGTL 572

Query: 598 INAFGEDQRDAEAFAVLQYMKE 619
           I+ F ++     A+ + + M+E
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEE 594



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 30/393 (7%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           M + VG       Y   +      G+  EA  VFE +     +P   +YNA++   V  G
Sbjct: 66  MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG 125

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
           Y   A  V   M   G+ PD +++++ + ++    R  +A  +L  M     + N   Y 
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G+ +       +++  +M +SGV      +N ++    K   +       D+++  
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G+ P+  T+N  I    + G  D A  +   + E+G  P   TYN +I  L +  ++++ 
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-------DAI----------------- 565
           +  LG M  +GL P+  TY TL+  Y + G          DA+                 
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C EG +++A+  F      G+KP+ +  N+LI          EA  +   M E GL P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425

Query: 626 VVTYTTLMKALIRV------DKFHKVFSSYLFF 652
           V T+  L+  L ++      D   KV  S  +F
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 18/348 (5%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYL 351
           G  L PK  T  AVI    +  + +E   +F  + KE G K     Y ++++     G  
Sbjct: 2   GPPLLPKHVT--AVIKCQKDPMKALE---MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKF 56

Query: 352 KDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +  E V+ +M E  G    E  Y   +  Y   G+ + A  V + M+    +P  F Y+ 
Sbjct: 57  EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNA 116

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I++   D G + +  +V   M+  G+ PD + + + + +F K +  H A+   + M S+G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            E + + + T++   ++        ELF +M   G   C +T+N ++ +L ++   ++ +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +LL  +  +G+LPN+ TY   +    Q G  D A+  +  L +Q           G KP 
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ-----------GPKPD 285

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  N+LI    ++ +  EA   L  M   GL+PD  TY TL+    +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)

Query: 493 RAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR---AQGLLPNVVTY 548
           +A E+F  M +E G+    +TY  +I  LG   ++E ++ +L +MR      +L  V  Y
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--Y 79

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
              +  YG+ G+             +AVN F  M     +P+  + N++++   +     
Sbjct: 80  VGAMKNYGRKGKVQ-----------EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           +A  V   M++ G+ PDV ++T  MK+  +  + H
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPH 163


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 198/408 (48%), Gaps = 13/408 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ S+V+    +  ++D +  ++L  E+    ++L+    N ++  + +  + ++    L
Sbjct: 134 LSASVVVDGFCKAGRMDDA--RRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              +  G+ P   TY  ++  LS +G   + E+VF+E+K   +      Y+A++  Y + 
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G ++ A  V  E   +G+ P+E TY  LI+ +   G+ E+A ++L +M++     N  I+
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY   G   +  ++   M+  G++ D + YN +     + N +  A      M  
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+E + +++ TLI  H K G    A  LF +M+ +G  P   TYN+MI+   +     +
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIRE 431

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +R    M  +GL+P+V TY  LV  +G          C+ G  D A+  F  M+  G K
Sbjct: 432 AERFKKEMEKKGLVPDVYTYAALV--HGH---------CVNGKVDVALRLFEEMKQRGAK 480

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           P+ +A  +LI+   ++ R  EAF     M   GL PD   Y+ L+ +L
Sbjct: 481 PNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 2/363 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           +L    YN L+    R  +  +   ++ +M   G       Y++++  L+    I  S +
Sbjct: 165 KLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDI--SKV 222

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           + ++ EI+   +  D    + VI  + +AG+  +A        G G+ P   TY A+I  
Sbjct: 223 ESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALING 282

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G+   AE +  +++  G+      +N ++ GY + G +  A  + + MER G+  D
Sbjct: 283 FCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLD 342

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            +TY+ L        R E A+ +L  M  +  + N   Y+ +++ +   G+     ++ +
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFR 402

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M+  G  P    YNVMID + K   +  A      M  +G+ PD  T+  L+  H   G
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D A  LFEEM++RG  P    Y  +I+ L ++ R E+  +   NM A GL P+   Y+
Sbjct: 463 KVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYS 522

Query: 550 TLV 552
            LV
Sbjct: 523 MLV 525


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 204/444 (45%), Gaps = 52/444 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YNA+IS  ++ + ++ A  +  +MR  G+  D + Y+++I SL    K++ +       
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF------ 186

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                  E+  +LL D                        G  P   TY  +I A    G
Sbjct: 187 -------EVMDELLKD------------------------GCKPSVITYTILIEATILEG 215

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  +F+EL   GL+P    YNA+++G  K G    A   V  +   G  PD  +Y+
Sbjct: 216 RINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+ ++ N  RWE    ++K+M +S  +PN   +S +++ +   G  +    VL+ MK  
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYD 492
           G+ PD++ Y+ +I  F K   L  A+   ++M+S+G  PD + +NT++   C F C   D
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA--D 393

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++FE++ E G  P    YN M + L           ++  M  +G+ P+ +TY +L+
Sbjct: 394 LALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         C +GL D+A+     M     +P+ ++ N ++    +  R  E   
Sbjct: 454 SCL-----------CRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIE 502

Query: 613 VLQYMKENGLKPDVVTYTTLMKAL 636
           +L  M E G  P+  +Y  L++ +
Sbjct: 503 LLITMVEKGCLPNETSYVLLIEGI 526



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G+  E+    E +   G KP       L+KG+     LK A  V+  +E  G  PD ++
Sbjct: 75  AGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD-PDVYS 133

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ +I  ++ A + +SA  V   M      P+   Y+ ++     RG+ +  F+V+ E+ 
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G +P    Y ++I+       ++ A+  FD ++S G+ PD  T+N +I    K G  D
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMED 253

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           RA +    +  RG  P   +YNI++     + RWED +RL+ +M   G  PNVVT++ L+
Sbjct: 254 RALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             +           C EG   +AVN   VM+  GL P + + + LI+AF ++ R   A  
Sbjct: 314 SSF-----------CREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
            L+ M  +G  PD+V Y T++  L +
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCK 388



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I    ++ ++  A  +  R R    +P  +TYN +I +      LE A  +M ++ 
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG     I Y+++I++     +I+ +L  +L+ E+    +  D    N +I G  K G 
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEAL--ELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+ F+      G +P   +Y  ++ +  N  R  + E + +++  SG +P    ++ 
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + + G +++A  V+  M+  G+ PD ++Y  LI A+   GR + A   L++M    
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ ILA     G       V +++   G  P    YN M            A+
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M+ +GI+PD IT+N+LI C  + G  D A  L  +M+   + P   ++NI++  +
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            +  R  +   LL  M  +G LPN  +Y  L++    +G   +A+E
Sbjct: 492 CKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAME 537



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 172/375 (45%), Gaps = 12/375 (3%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D  L   +I GF  + +  KAMR + + +  G  P   +Y A+I+  S + +   A  VF
Sbjct: 96  DVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVF 154

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + ++  G  P    YN ++      G L+ A  V+ E+ + G  P   TY++LI+A    
Sbjct: 155 DRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILE 214

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR   A  +  E+     +P+ + Y+ I+ G    G   R    ++ + + G  PD   Y
Sbjct: 215 GRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSY 274

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N+++ +F   +           M+  G EP+ +T + LI    + GR   A  + E M+E
Sbjct: 275 NILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE 334

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +G  P + +Y+ +I+   ++ R +     L  M + G LP++V Y T++           
Sbjct: 335 KGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTIL----------- 383

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A  C  G +D A++ F  +   G  P+  A N++ +A        +A  ++  M   G+ 
Sbjct: 384 ATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGID 443

Query: 624 PDVVTYTTLMKALIR 638
           PD +TY +L+  L R
Sbjct: 444 PDEITYNSLISCLCR 458



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 159/360 (44%), Gaps = 44/360 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF-- 183
           ++ ++ +LCS    ++LA+ V+  L K   C    + Y+ILI A    GR  +  E F  
Sbjct: 169 YNIMIGSLCS-RGKLELAFEVMDELLKDG-CKPSVITYTILIEATILEGRINEALELFDE 226

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           L+S+  R    TYNA+I    +    ++AL+ +  +   G + D ++Y+++++S    ++
Sbjct: 227 LVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSR 286

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +    ++L K++     E +    + +I  F + G   +A+  L + +  GL+P + +Y
Sbjct: 287 WEDG--ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344

Query: 304 AAVITALSNSGR---TIE--------------------------------AEAVFEELKE 328
             +I+A    GR    IE                                A  VFE+L E
Sbjct: 345 DPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P  +AYN +       G    A  ++SEM R G+ PDE TY+ LI      G  + 
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +ME +  +P    ++ +L G           ++L  M   G  P+   Y ++I+
Sbjct: 465 AIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 133/302 (44%), Gaps = 16/302 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA-LGRS-----EKLYEA 182
           ++++++ +C      D A   V  L     C    + Y+IL+ + L +S     E+L + 
Sbjct: 239 YNAIIRGICKEGME-DRALDFVRHLSARG-CNPDVVSYNILLRSFLNKSRWEDGERLMKD 296

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +LS  +    +T++ LIS+  R   + +A+N++  M++ G   D  +Y  +I +  +  
Sbjct: 297 MVLSGCEP-NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355

Query: 243 KIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           ++D ++  L+K+      D    D    N ++    K G A  A+        VG  P  
Sbjct: 356 RLDLAIEYLEKMVS----DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTV 411

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y  + +AL + G  I+A  +  E+   G+ P    YN+L+    + G + +A  ++ +
Sbjct: 412 RAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVD 471

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ME +   P   ++++++     A R      +L  M      PN   Y  ++ G    G 
Sbjct: 472 MEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG- 530

Query: 421 WQ 422
           W+
Sbjct: 531 WR 532



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 51/283 (18%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + +SILI +  R  ++ EA     + + + LTP   +Y+ LISA  +   L+ A+
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAI 361

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDV 271
             + KM  DG   D +NY+ ++ +L +    D +L   +KL  E+ C       +  N +
Sbjct: 362 EYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL-DEVGCPPTV---RAYNTM 417

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA------------ 319
                  G+  KA+  +      G+ P   TY ++I+ L   G   EA            
Sbjct: 418 FSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRF 477

Query: 320 -----------------EAVFEELK------ESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
                              VFE ++      E G  P   +Y  L++G    G+  +A  
Sbjct: 478 QPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAME 537

Query: 357 VVSEMERSGVLPDEHTYSL-----LIDAYANAGRWESARIVLK 394
           + + + R GV+  + +  L     ++D Y      ES   +L+
Sbjct: 538 LANSLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSESKNQLLQ 580



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 12/115 (10%)

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
            L ++ ++G  P+VV  T L+  +  S     A+  +E           ++ T G  P  
Sbjct: 84  FLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME-----------ILETYG-DPDV 131

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + N++I+ F +  +   A  V   M+  G  PDVVTY  ++ +L    K    F
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 18/475 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  +   GR     E F     + + P  +TYN +I    +  DLE    L  +M 
Sbjct: 18  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 77

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y++++  L R  ++  +    L  E+   K+  DG   + +  G ++ GD
Sbjct: 78  CHGLKPNAITYNVLLSGLCRAGRMGET--SALLDEMASQKMVPDGFTYSILFDGLSRNGD 135

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   +   G     G++    T + ++  L   G+   AE V + L  +GL P    YN 
Sbjct: 136 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 195

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY + G L+ A     +M+   + PD  TY+ LI+    A R  +A+ +L EM+ + 
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 255

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P    ++ ++  Y   G+ ++ F VL EM+ +G++P+   Y  +++ F K   +  A+
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A  D M  + + P+   +N +ID + + G  D+A  L E+M+  G  P   TYN++I  L
Sbjct: 316 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             Q +  + + ++ ++    L+P+ V+Y TL+           +  C  G  D+A++  +
Sbjct: 376 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-----------SACCYRGNIDKALDLQQ 424

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            M   G+K +    + LI+  G   R  E   + Q M +N + P    +  +++A
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 46/374 (12%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   +Y  VI  +  +GR  +A  VF+E+ E  + P    YN ++ G++K G L+    +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +M   G+ P+  TY++L+     AGR      +L EM      P+ F YS +  G   
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 418 RGEWQRTF-----------------------------------QVLKEMKSSGVEPDTHF 442
            G+ +                                      +VL+ + ++G+ P    
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I+ + +   L  A + F +M S  I+PD IT+N LI+   K  R   A++L  EMQ
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           + G  P   T+N +I+  G   + E    +L  M+  GL PNVV+Y ++V+ + ++G+  
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A+  L+ +  + V            P+    N++I+A+ E   + +AF +++ MK NG+
Sbjct: 313 EAVAILDDMFHKDV-----------LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGI 361

Query: 623 KPDVVTYTTLMKAL 636
            P +VTY  L+K L
Sbjct: 362 SPSIVTYNLLIKGL 375



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 153 LQKHNLCYSYE---LLYSILIHALGRSEKLYE-AFLLSQ--RQRLTP--LTYNALISACA 204
           L+   +C+  +   + Y++L+  L R+ ++ E + LL +   Q++ P   TY+ L    +
Sbjct: 72  LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN D +  L+L  K  ++G        S+++  L +  K+  S+ +++ + +    +   
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV--SIAEEVLQSLVNAGLVPT 189

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             + N +I G+ + G+   A    G  +   + P   TY A+I  L  + R   A+ +  
Sbjct: 190 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 249

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E++++G+ P  + +N L+  Y + G L+    V+SEM+ +G+ P+  +Y  +++A+   G
Sbjct: 250 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 309

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   A  +L +M      PN+ +Y+ I+  Y + G   + F ++++MKS+G+ P    YN
Sbjct: 310 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 369

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I      + +  A    + + +  + PD +++NTLI      G  D+A +L + M + 
Sbjct: 370 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 429

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           G      TY+ +I+ LG   R  +++ L   M    ++P+   +  +V+ Y + G
Sbjct: 430 GIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 11/310 (3%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   +YN ++ G  + G   DA  V  EM    VLP+  TY+ +ID +   G  E+   +
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             +M     KPN+  Y+ +L+G    G    T  +L EM S  + PD   Y+++ D   +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                  ++ F + L  G+     T + L++   K G+   AEE+ + +   G  P    
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN +IN   +    E      G M+++ + P+ +TY  L++   ++ R  +A + L  + 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D  VN           P+    N+LI+A+G   +  + F VL  M+ENGLKP+VV+Y ++
Sbjct: 253 DNGVN-----------PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 301

Query: 633 MKALIRVDKF 642
           + A  +  K 
Sbjct: 302 VNAFCKNGKI 311



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 178/392 (45%), Gaps = 12/392 (3%)

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH--NLCYSYELLYSILIHALGRSE 177
           S + VP    +S+L +  S N     + A++S   K+  N     +   SIL++ L +  
Sbjct: 113 SQKMVPDGFTYSILFDGLSRNGD---SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 169

Query: 178 KLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           K+  A  + Q      L P  + YN LI+   +  +LE A +   +M+      D I Y+
Sbjct: 170 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L +  +I ++  Q L  E++ + +    +  N +I  + + G   K    L   Q
Sbjct: 230 ALINGLCKAERITNA--QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 287

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P   +Y +++ A   +G+  EA A+ +++    + P  + YNA++  YV+ G   
Sbjct: 288 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 347

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  +V +M+ +G+ P   TY+LLI    N  +   A  ++  +      P++  Y+ ++
Sbjct: 348 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 407

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           +    RG   +   + + M   G++     Y+ +I   G    L+     + +M+   + 
Sbjct: 408 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 467

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           P     N +++ + K G   +AE+L +EM ++
Sbjct: 468 PSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 12/291 (4%)

Query: 357 VVSEMERSGVLP-DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
           ++  M R G  P +  +Y+++I     AGR   A  V  EM      PN   Y+ ++ G+
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+ +  F++  +M   G++P+   YNV++    +   +    A  D M S+ + PD 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            T++ L D   + G       LF +  + G      T +I++N L +  +    + +L +
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           +   GL+P  V Y TL++ Y Q+G        LEG    A + F  M++  +KP ++  N
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGE-------LEG----AFSTFGQMKSRHIKPDHITYN 229

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +LIN   + +R   A  +L  M++NG+ P V T+ TL+ A  R  +  K F
Sbjct: 230 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 12/224 (5%)

Query: 427 VLKEMKSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           +L+ M   G  P   F YNV+I    +      A+  FD M    + P+ IT+NT+ID H
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  +    L ++M   G  P   TYN++++ L    R  +   LL  M +Q ++P+ 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            TY+ L D   ++G            S   ++ F     +G+   +   + L+N   +D 
Sbjct: 121 FTYSILFDGLSRNGD-----------SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 169

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + + A  VLQ +   GL P  V Y TL+    +  +    FS++
Sbjct: 170 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 26/457 (5%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARND 207
           ++KH   +   + Y+ L+  L    ++ +A  L +R      +P  +TYN L+    +  
Sbjct: 1   MRKHGF-WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVG 59

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           +L++AL +     + G+  D + Y+ +I    + +K+D +  Q++ + +  + +  D   
Sbjct: 60  ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEA--QRILQRMVSENLVPDVVT 117

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI-EAEAVFEEL 326
            N ++ G  K G   +A R L + +G   SP   TY+ +I+ L    R + EA  +F  +
Sbjct: 118 YNSLVNGLCKNGRVDEA-RMLIVDKG--FSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            + G +P    YN L+ G +K   + +A  + S + + G+ PD  TY++ ID    AGR 
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           E A ++LK+M+     P+   ++ ++ G            +L  M++ G  P+   +N +
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC---GRYDRAEELFEEMQE 503
           I    +      AM  F  ML  G++P  +T+N L+D   K    GR   A  LF+ M E
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +G  P   TY+ +I+ LG+  + +D +RLLG M A+G +PNV TY +L  I G  G    
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL--ISGLCG---- 408

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
               LE + D+A+  F  M   G  P  +   ++I+A
Sbjct: 409 ----LEKV-DEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 212/434 (48%), Gaps = 18/434 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLL-- 185
           +++LL  LC+     D A A+   + K    YS +++ Y+ L+H   +  +L EA  +  
Sbjct: 13  YNALLSGLCNGGRMSD-AQALYERMIKAG--YSPDVVTYNTLLHGFCKVGELDEALKIFD 69

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + ++   P  +TYNALI+   + D L++A  ++ +M  +    D + Y+ ++  L +  
Sbjct: 70  GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNG 129

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA-GDASKAMRFLGMAQGVGLSPKTA 301
           ++D + +  + K    + I       + +I G  +     S+A++  G     G  P+  
Sbjct: 130 RVDEARMLIVDKGFSPNVITY-----STLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I  L    R  EA  +F  L + GL+P    Y   + G  K G ++DA  ++ +M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  G +PD  +++ +I+      R + A ++L  ME     PN+  ++ ++ G    G+W
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY---NCLHHAMAAFDRMLSEGIEPDTITW 478
           ++     KEM   GV+P    YN+++D   K      +  A+  FD M+ +G  PD +T+
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + LID   K G+ D A  L   M+ +G  P   TYN +I+ L   E+ ++   L   M  
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVE 424

Query: 539 QGLLPNVVTYTTLV 552
           +G +P+ +TY T++
Sbjct: 425 KGCVPDTITYGTII 438



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 18/378 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G    G  S A          G SP   TY  ++      G   EA  +F+   +
Sbjct: 14  NALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVK 73

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P    YNAL+ G+ K   L +A+ ++  M    ++PD  TY+ L++     GR + 
Sbjct: 74  RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDE 133

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           AR+++ +   S   PN   YS +++G  R+        ++   +   G EP+   YN++I
Sbjct: 134 ARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILI 190

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K + ++ A   F  ++  G+EPD IT+   ID   K GR + A  + ++M E+G  
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   ++N +IN L +++R ++ + LL  M A+G  PN +++ TL  I GQ         C
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL--ICGQ---------C 299

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG---EDQRDAEAFAVLQYMKENGLKP 624
             G   +A+  F+ M   G+KP+ +  N L++      ++ R  EA  +   M E G  P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359

Query: 625 DVVTYTTLMKALIRVDKF 642
           DVVTY+ L+  L +  K 
Sbjct: 360 DVVTYSALIDGLGKAGKL 377



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 204/446 (45%), Gaps = 20/446 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYNAL+S       +  A  L  +M + GY  D + Y+ ++    +  ++D +L  K++
Sbjct: 11  ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL--KIF 68

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                     D    N +I GF KA    +A R L       L P   TY +++  L  +
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK-MGYLKDAEFVVSEMERSGVLPDEHT 372
           GR  EA  +   + + G  P    Y+ L+ G  + +  + +A  +   + + G  P+  T
Sbjct: 129 GRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y++LID      R   A  +   +     +P++  Y+  + G    G  +    +LK+M 
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G  PD   +N +I+   K   +  A      M ++G  P+ I++NTLI    + G++ 
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLG---EQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           +A   F+EM +RG  P   TYNI+++ L    ++ R ++   L   M  +G +P+VVTY+
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+D  G++G+ DDA   L             M   G  P+    NSLI+     ++  E
Sbjct: 366 ALIDGLGKAGKLDDARRLLG-----------AMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKA 635
           A  +   M E G  PD +TY T++ A
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 44/322 (13%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M + G  P+  TY+ L+    N GR   A+ + + M  +   P+   Y+ +L G+   GE
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++       G  PD   YN +I+ F K + L  A     RM+SE + PD +T+N+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 481 LIDCHFKCGRYDRAE---------------------------------ELFEEMQERGYF 507
           L++   K GR D A                                  +LF  + ++GY 
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYNI+I+ L +++R  +   L   +   GL P+ +TYT  +D   ++GR +DA+  
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+ + ++           G  P  ++ N++IN   +++R  EA  +L  M+  G  P+ +
Sbjct: 241 LKDMDEK-----------GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           ++ TL+    R  K+ K  +++
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTF 311


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 221/472 (46%), Gaps = 25/472 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N LI    RN ++ +A+ L+  M+ +G   D + Y+ ++    +   + ++  +KL  E
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA--KKLMGE 77

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           I    +E +      +I  + K+     A+          L P   TY  ++  L  SG+
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA++VF E++E G+ P   +Y  L+    K G + +A  +   M   G+  D   Y+ 
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+D    AG   +A  + + +      PN   YS ++ G+   G+  +   +L+EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y+ ++D + K   L+ AM    +M+   I P+   + TLID +FK  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF+EM+ RG        +  +N L    R E+   L  +M ++GLLP+ V YT+++D +
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 556 GQSGRFDDAIECLEGLSDQA----VNAFRV-------------------MRTDGLKPSNL 592
            ++G+  DA    + +++++    V A+ V                   MR  GL P + 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSA 437

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             N++INA+ ++     A  +L  MK  GLKP+ +T   L++ L    +  K
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 11/380 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G+ + G+ S+A+  L   +  G +P   TY  ++      G    A+ +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
              L+P    Y  L+  Y K   L+DA ++  EM    ++PD  TY+ +++    +G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A+ V +EME     PN F Y+ ++      G     F +   M   G+  D   Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K    ++A   F  +L E + P+ +T++ LID H K G  ++ E L +EM+E+  F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    Y+ +++   ++    +   ++  M  + +LPNV  Y TL+D Y ++ +       
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ------- 312

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G+   A++ F+ M++ GL+ +N  ++S +N      R  EA  + + M   GL PD V
Sbjct: 313 -RGI---ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 628 TYTTLMKALIRVDKFHKVFS 647
            YT++M    +  K    F+
Sbjct: 369 NYTSMMDGFFKAGKESDAFN 388



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 227/536 (42%), Gaps = 65/536 (12%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI A  +S+ L +A  +      + L P  +TY  +++   ++  +E+A ++  +
Sbjct: 88  ITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   +  +Y+ +I SL +   +  + +  L   +    I  D  +   ++ G  KA
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFV--LQGRMVVRGIGFDVVVYTALMDGLFKA 205

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G A+ A     +     L P   TY+A+I      G   + E + +E++E  + P    Y
Sbjct: 206 GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++++ GY K G L +A  V+ +M +  +LP+   Y  LID Y  A +   A  + KEM+ 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK------ 452
              + N+F+    +   +  G  +   ++ K+M S G+ PD   Y  M+D F K      
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 453 -------------------YNCLHHAMAAFDRMLSE---------GIEPDTITWNTLIDC 484
                              YN L + +    +  SE         G+ PD+ T+NT+I+ 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G    A +L  EM+  G  P + T NI++  L      E    LL +M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
             T+  ++D   +S R D  +                         C  G+  +A   F+
Sbjct: 506 PTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G+    +  N+LI+ +       +AFAV   M   G+ P+V TY  L+  L
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 182/409 (44%), Gaps = 62/409 (15%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQ-RLTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y++LI+ L   G+ E   E+F    RQ  L P   T+N +I+A  +  +L  AL L+++M
Sbjct: 405 YNVLINGLFKLGKYES--ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV-GF--- 275
           +  G   + I  ++++Q L    +I+ ++                  LLND++V GF   
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTM-----------------DLLNDMLVMGFHPT 505

Query: 276 -----------AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                      +K+  A   +       G+G+    +TY  +I+     G    A  VF+
Sbjct: 506 PTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++   G+      YNAL+ GY    +LK A  V S+M   GV P+  TY++L+   + A 
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             + A  ++ +M+     PN+  Y  +++G+   G  +   ++  EM + G  P T  YN
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD------------ 492
           V+I  F K   +  A      M   GI P++ T++ LI     CG Y             
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI-----CGWYKLSKQPELNKSLK 740

Query: 493 -----RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
                 A+ LFEEM E+G+ PC  T   +   L +  +  D +R+L  +
Sbjct: 741 RSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 11/384 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E+  E F     + L P  + Y +++    +      A N+  +M +     D + Y
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I  L +  K +S       +++    +  D    N +I  + K G+   A++ L   
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQL---GLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL P + T   ++  L  +G   +   +  ++   G  P    + A+L    K    
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS--- 519

Query: 352 KDAEFVV---SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           + A+ ++    ++   GV  D  TY+ LI  +   G    A +V K+M       +   Y
Sbjct: 520 RRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY      ++ F V  +M + GV P+   YN+++        +  A    ++M  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ P+  T++ L+  H K G      +L+ EM  +G+ P T TYN++I+   + ++   
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLV 552
            K L+  M+ +G+ PN  TY  L+
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILI 723



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +N++I+             LL  M+ +G  P++VTY TL++ + + G    A + +  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
              VN         L+P+ +   +LI+A+ + Q   +A  +   M    L PDVVTYT +
Sbjct: 80  --LVN---------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 633 MKALIRVDKFHKVFSSY 649
           M  L +  K  +  S +
Sbjct: 129 MNGLCKSGKVEEAKSVF 145


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 205/441 (46%), Gaps = 20/441 (4%)

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           +LI    +     KA  +M  +   G   D I Y+++I    +T +I S+L Q L     
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSAL-QLL----- 203

Query: 258 CDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
            D++ +   ++  N ++     +G   +AM  L         P   TY  +I A      
Sbjct: 204 -DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  + +E+++ G KP    YN L+ G  K G L +A   ++ M   G  P+  T+++
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           ++ +  + GRW  A   L EM      P+   ++ ++     +G   R   VL++M   G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P++  YN ++    K   +  A+   D M+S G  PD +T+NTL+    K G+ D A 
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+  ++  +G  P   TYN +I+ L +  + +D  +LL  M+ +GL P+++TY+TLV   
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + G+ D+AI     L +            G+KP+ +  NS++    + ++   A   L 
Sbjct: 503 SREGKVDEAIAFFHDLEEM-----------GVKPNAITYNSIMLGLCKARQTVRAIDFLA 551

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
           YM   G KP   +Y  L++ L
Sbjct: 552 YMVARGCKPTETSYMILIEGL 572



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 200/435 (45%), Gaps = 16/435 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            RN +LE+    +  M   G   D I  + +I+ L +T K   +   ++ + +E      
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKA--TRVMEILEDSGAVP 178

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ K G+   A++ L     + +SP   TY  ++  L +SG+  EA  V 
Sbjct: 179 DVITYNVLISGYCKTGEIGSALQLL---DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +   +    P    Y  L++   K   +  A  ++ EM   G  PD  TY++LI+     
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L  M     +PN   ++ IL      G W    + L EM   G  P    +
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   +  A+   ++M   G  P+++++N L+    K  + +RA E  + M  
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN ++  L +  + +    +L  + ++G  P ++TY T++D   + G+ DD
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           AI+ L+            M+  GLKP  +  ++L+     + +  EA A    ++E G+K
Sbjct: 476 AIKLLDE-----------MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVK 524

Query: 624 PDVVTYTTLMKALIR 638
           P+ +TY ++M  L +
Sbjct: 525 PNAITYNSIMLGLCK 539



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 14/332 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G   E     E++   G  P   A  +L++G  K G    A  V+  +E SG +PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY++LI  Y   G   SA  +L  M VS   P+   Y+ IL    D G+ +   +VL 
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                   PD   Y ++I+   K + +  AM   D M  +G +PD +T+N LI+   K G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A      M   G  P   T+NI++  +    RW D ++ L  M  +G  P+VVT+ 
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++             C +GL  +A++    M   G  P++L+ N L++A  +D++   
Sbjct: 357 ILINFL-----------CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A   L  M   G  PD+VTY TL+ AL +  K
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 437



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 176/399 (44%), Gaps = 27/399 (6%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             + G+  +  +FL      G  P      ++I  L  +G+T +A  V E L++SG  P 
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN L+ GY K G +  A   +  ++R  V PD  TY+ ++    ++G+ + A  VL 
Sbjct: 180 VITYNVLISGYCKTGEIGSA---LQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
                   P+   Y+ ++          +  ++L EM+  G +PD   YNV+I+   K  
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A+   + M S G +P+ IT N ++      GR+  AE+   EM  +G  P   T+N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------- 566
           I+IN L  +        +L  M   G  PN ++Y  L+    +  + + AIE        
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 567 ----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                           C +G  D AV     + + G  P  +  N++I+   +  +  +A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +L  MK  GLKPD++TY+TL+  L R  K  +  + +
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFF 515



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 206/449 (45%), Gaps = 8/449 (1%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR 190
           SL++ LC +  +   A  V+  L+         + Y++LI    ++ ++  A  L  R  
Sbjct: 150 SLIRGLCKTGKTWK-ATRVMEILEDSGAVPDV-ITYNVLISGYCKTGEIGSALQLLDRMS 207

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           ++P  +TYN ++     +  L++A+ ++ +  Q   + D I Y+++I++  + + +  ++
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             KL  E+     + D    N +I G  K G   +A+RFL      G  P   T+  ++ 
Sbjct: 268 --KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           ++ ++GR ++AE    E+   G  P    +N L+    + G +  A  V+ +M + G  P
Sbjct: 326 SMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTP 385

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  +Y+ L+ A     + E A   L  M      P+   Y+ +L      G+     ++L
Sbjct: 386 NSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            ++ S G  P    YN +ID   K      A+   D M  +G++PD IT++TL+    + 
Sbjct: 446 NQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSRE 505

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           G+ D A   F +++E G  P   TYN IM+ L   ++    +   L  M A+G  P   +
Sbjct: 506 GKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAID-FLAYMVARGCKPTETS 564

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           Y  L++     G   +A+E L  L  + V
Sbjct: 565 YMILIEGLAYEGLAKEALELLNELCSRGV 593



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 178/419 (42%), Gaps = 44/419 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++++L+ LC S    +    +   +Q+   CY   + Y+ILI A  +   + +A  L   
Sbjct: 215 YNTILRTLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCKESGVGQAMKLLDE 272

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R     P  +TYN LI+   +   L++A+  ++ M   G   + I ++++++S+  T  
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCST-- 330

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                                              G    A +FL      G SP   T+
Sbjct: 331 -----------------------------------GRWMDAEKFLAEMIRKGCSPSVVTF 355

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G    A  V E++ + G  P + +YN LL    K   ++ A   +  M  
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD  TY+ L+ A    G+ + A  +L ++      P    Y+ ++ G    G+   
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L EMK  G++PD   Y+ ++    +   +  A+A F  +   G++P+ IT+N+++ 
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML 535

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K  +  RA +    M  RG  P  T+Y I+I  L  +   ++   LL  + ++G++
Sbjct: 536 GLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 236/524 (45%), Gaps = 57/524 (10%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMRQDG 223
           ++ +  +S KL EAF + +  R     P    Y  LI A +   + +  L L+ +M++ G
Sbjct: 173 MVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIG 232

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y      ++ +I    R  ++D++L   L  E++ +    D  L N  I  F K G    
Sbjct: 233 YEVTVHLFTTLICVFAREGRVDAAL--SLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDM 290

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   T+ ++I  L  + R  EA  +FEEL  +   P   AYN ++ 
Sbjct: 291 AWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIM 350

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY  +G   +A  ++   +R G +P    Y+ ++      G+ E A  +L+ M++  A P
Sbjct: 351 GYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMD-AAP 409

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID--------------- 448
           N   Y+ ++      GE +   +V   MK +G+ P+    N+MID               
Sbjct: 410 NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469

Query: 449 -------------TF-------GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
                        TF       G++  ++ A   +++ML  G  P+ + + +LI   FKC
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR +   ++++EM  RG  P     N  ++ + +    E  + L   ++AQGL P+V +Y
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           + L+    + G            S      F  M+  GL     A N +I+ F +  +  
Sbjct: 590 SILIHGLVKGG-----------FSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVN 638

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           +A+ +L+ MK  GL+P VVTY +++  L ++D+  +   +Y+ F
Sbjct: 639 KAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE---AYMLF 679



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 240/526 (45%), Gaps = 28/526 (5%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           +L N+C         +D+A+     L+   L    ++ ++ +I  L ++E++ EA  L  
Sbjct: 273 VLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPD-DVTFTSMIGVLCKAERVDEAVELFE 331

Query: 186 ---SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              S +       YN +I          +A +L+ + ++ G     I Y+ ++  L R  
Sbjct: 332 ELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           K++ +L     + +E  K++    L   N +I    KAG+   A++     +  GL P  
Sbjct: 392 KVEEAL-----RILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNI 446

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T   +I  L  + R  EA ++F  L      P +  + +L+ G  + G + DA  +  +
Sbjct: 447 ITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEK 506

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  SG  P+   Y+ LI  +   GR E    + KEM      P+  + +  +      GE
Sbjct: 507 MLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGE 566

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            ++   + +E+K+ G+ PD   Y+++I    K          F  M  +G+  DT  +N 
Sbjct: 567 IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNI 626

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +ID   K G+ ++A +L EEM+ +G  P   TY  +I+ L + +R ++   L    +++ 
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           +  NVV Y++L+D +G+ GR D+A   LE L  +           GL P+    N L++A
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNTYTWNCLLDA 735

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             + +   EA    Q MK     P+ VTY+ ++  L +V KF+K F
Sbjct: 736 LVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAF 781



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 243/563 (43%), Gaps = 49/563 (8%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+  +S ++VP    ++ +     S    + AY+++   QK   C    + Y+ ++  LG
Sbjct: 330 FEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER-QKRKGCIPSVIAYNCILTCLG 388

Query: 175 RSEKLYEAFLLSQRQRLTP----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           R  K+ EA  + +  ++       +YN LI    +  +LE AL +   M++ G   + I 
Sbjct: 389 RKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448

Query: 231 YSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC-------DKIE 262
            +++I  L +  ++D                      SL+  L +  +        +K+ 
Sbjct: 449 VNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508

Query: 263 LDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
             GQ  N V     I  F K G      +        G SP        +  +  +G   
Sbjct: 509 DSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIE 568

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +  A+FEE+K  GL P  ++Y+ L+ G VK G+ KD   +  EM+  G+  D   Y+++I
Sbjct: 569 KGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVI 628

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D +  +G+   A  +L+EM+    +P    Y  ++ G          + + +E KS  V+
Sbjct: 629 DGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVD 688

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            +   Y+ +ID FGK   +  A    + ++ +G+ P+T TWN L+D   K    D A   
Sbjct: 689 LNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVC 748

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F+ M+     P   TY+IM+N L +  ++         M+ QGL PN +TYTT++    +
Sbjct: 749 FQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLAR 808

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G   + +E        A + F   ++ G  P +   N++I       +  +A+ + +  
Sbjct: 809 VG---NVLE--------AKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEET 857

Query: 618 KENGLKPDVVTYTTLMKALIRVD 640
           +  G +    T   L+ AL + D
Sbjct: 858 RLKGCRIYSKTCVVLLDALHKAD 880



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 238/524 (45%), Gaps = 51/524 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G   K  EA+ L +RQ+      + + YN +++   R   +E+AL ++  M+
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK 404

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            D    +  +Y+++I  L +  +++++L +Q   KE           L  ++I       
Sbjct: 405 MDAAP-NLTSYNILIDMLCKAGELEAALKVQDSMKE---------AGLFPNIITVNIMID 454

Query: 280 DASKAMR-------FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
              KA R       FLG+   V  +P + T+ ++I  L   G+  +A  ++E++ +SG  
Sbjct: 455 RLCKAQRLDEACSIFLGLDHKV-CTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQT 513

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    Y +L++ + K G  +D   +  EM   G  PD    +  +D    AG  E  R +
Sbjct: 514 PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRAL 573

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +E++     P+   YS ++ G    G  + T+++  EMK  G+  DT  YN++ID F K
Sbjct: 574 FEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCK 633

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              ++ A    + M ++G++P  +T+ ++ID   K  R D A  LFEE + +        
Sbjct: 634 SGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVV 693

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +I+  G+  R ++   +L  +  +GL PN  T+  L+D   ++   D+A+ C + + 
Sbjct: 694 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMK 753

Query: 573 D------------------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           +                        +A   ++ M+  GLKP+ +   ++I+         
Sbjct: 754 NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVL 813

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           EA  + +  K +G  PD   Y  +++ L      +K   +Y+ F
Sbjct: 814 EAKDLFERFKSSGGIPDSACYNAMIEGL---SNANKAMDAYILF 854



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/475 (22%), Positives = 210/475 (44%), Gaps = 27/475 (5%)

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
           +Q  +P  YNAL+   AR  +LE    ++ +M   G+         ++ S  ++ K+  +
Sbjct: 127 KQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREA 186

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
               + + +   K          +I   + A +A   +  L   Q +G       +  +I
Sbjct: 187 F--GVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
              +  GR   A ++ +E+K +        YN  +  + K+G +  A     E++  G++
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD+ T++ +I     A R + A  + +E++ + + P  + Y+ ++ GY   G++   + +
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L+  K  G  P    YN ++   G+   +  A+   + M  +   P+  ++N LID   K
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCK 423

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G  + A ++ + M+E G FP   T NIMI+ L + +R ++   +   +  +   P+ VT
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVT 483

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSD--QAVNA----------------------FRVMR 583
           + +L+D  G+ G+ +DA    E + D  Q  NA                      ++ M 
Sbjct: 484 FCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMM 543

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             G  P  + LN+ ++   +     +  A+ + +K  GL PDV +Y+ L+  L++
Sbjct: 544 HRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 23/370 (6%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A++  ++ +      E + EE+  +G  P       ++  +VK   L++A  V+  M 
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMR 194

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           +    P    Y+ LI A + A   +    +L++M+    +    +++ ++  +   G   
Sbjct: 195 KFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVD 254

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L EMKS+    D   YNV ID FGK   +  A   F  + S+G+ PD +T+ ++I
Sbjct: 255 AALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K  R D A ELFEE+      PC   YN MI   G   ++ +   LL   + +G +
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLS-DQAVN-------------------AFRV- 581
           P+V+ Y  ++   G+ G+ ++A+  LE +  D A N                   A +V 
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQ 434

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  GL P+ + +N +I+   + QR  EA ++   +      PD VT+ +L+  L R 
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494

Query: 640 DKFHKVFSSY 649
            K +  +  Y
Sbjct: 495 GKVNDAYMLY 504



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 16/282 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ ++   C S   ++ AY ++  ++   L  +  + Y  +I  L + ++L EA++L + 
Sbjct: 624 YNIVIDGFCKS-GKVNKAYQLLEEMKTKGLQPTV-VTYGSVIDGLAKIDRLDEAYMLFEE 681

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +     L  + Y++LI    +   +++A  ++ ++ Q G   +   ++ ++ +L +  +
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEE 741

Query: 244 IDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           ID +L+  Q + K ++C   E+   ++   + G  K    +KA  F    Q  GL P T 
Sbjct: 742 IDEALVCFQNM-KNLKCPPNEVTYSIM---VNGLCKVRKFNKAFVFWQEMQKQGLKPNTI 797

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I+ L+  G  +EA+ +FE  K SG  P +  YNA+++G        DA  +  E 
Sbjct: 798 TYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEET 857

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARI---VLKEMEVSH 400
              G      T  +L+DA   A   E A I   VL+EM  S 
Sbjct: 858 RLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQ 899


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 226/469 (48%), Gaps = 18/469 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+ H+L   GR  + ++  L  + +   P  ++Y+ +I+   +  +L++ L L+ +M+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y+ VI  L +T K+  +  +++ +E+  + I  DG +   +I GF K G+
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEA--ERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A R     Q   +SP   TY AVI  L  +GR +EA+ +F E+    L+P    Y A
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K G +K+A  + ++M + G+ P+  TY+ L D     G  ++A  +L EM    
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N + Y+ ++ G    G   +  +++K+M+ +G  PD   Y  ++D + K   +  A 
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               +ML   ++P  +T+N L++     G  +  E+L + M E+G  P  TTYN +I   
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             +        +   M A+G++P+  TY  L+  + ++               +A    R
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM-----------KEAWFLHR 662

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            M   G   +  + N+LI  F + ++  EA  + + M+  GL  D   Y
Sbjct: 663 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 167/366 (45%), Gaps = 11/366 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +     + G   +A + L   +  G  P   +Y+ VI      G       + EE++ 
Sbjct: 257 NIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQI 316

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GLKP    YN ++    K G + +AE V+ EM   G+ PD   Y+ LID +   G   S
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  EM+     P+   Y+ ++ G    G      ++  EM    +EPD   Y  +ID
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + K   +  A +  ++ML  G+ P+ +T+  L D   KCG  D A EL  EM  +G   
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN ++N L +    +   +L+ +M   G  P+ VTYTTL+D Y +S     A E L
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             + D+            L+P+ +  N L+N F       +   +L++M E G+ P+  T
Sbjct: 557 RQMLDRE-----------LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605

Query: 629 YTTLMK 634
           Y +L+K
Sbjct: 606 YNSLIK 611



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 169/362 (46%), Gaps = 12/362 (3%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKP 333
             +AG   +A +        GL     +    I+ LS     I+ A  VF E  E G+  
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T +YN +     ++G + +A  ++ +ME  G +PD  +YS +I+ Y   G  +    ++
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +EM++   KPN + Y+ ++      G+     +VL+EM S G+ PD   Y  +ID F K 
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A   FD M    I PD IT+  +I    + GR   A++LF EM  +   P   TY
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +I+   ++ + ++   L   M   GL PN+VTYT L D   + G  D A E L  +  
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +           GL+ +    NSL+N   +     +A  +++ M+  G  PD VTYTTLM
Sbjct: 492 K-----------GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 634 KA 635
            A
Sbjct: 541 DA 542



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 10/385 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y  LI    +  ++  A  L  +M++     DFI Y+ VI  L +T ++  +   KL+
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA--DKLF 416

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+ C ++E D      +I G+ K G   +A         +GL+P   TY A+   L   
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +  E+   GL+     YN+L+ G  K G +  A  ++ +ME +G  PD  TY
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+DAY  +     A  +L++M     +P    ++ ++ G+   G  +   ++LK M  
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN +I  +   N +      +  M ++G+ PD  T+N LI  H K      
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L  +M  +G+    ++YN +I    +++++ + + L   MR +GL+ +   Y    D
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716

Query: 554 IYGQSGRF-------DDAIE-CLEG 570
           I    G+        D+AIE CL G
Sbjct: 717 INYDEGKMELTLELCDEAIEKCLVG 741



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 153/331 (46%), Gaps = 12/331 (3%)

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK-MGYLKDAEFVVSEMERSGVL 367
            L  +G   EA  +F+++   GL     + N  +    + +  +K A  V  E    GV 
Sbjct: 191 VLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVC 250

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            +  +Y+++  +    GR   A  +L +ME+    P+   YS ++ GY   GE QR  ++
Sbjct: 251 WNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           ++EM+  G++P+ + YN +I    K   +  A      M+SEGI PD + + TLID   K
Sbjct: 311 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G    A  LF+EMQ+R   P   TY  +I  L +  R  +  +L   M  + L P+ VT
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           YT L+D Y           C EG   +A +    M   GL P+ +   +L +   +    
Sbjct: 431 YTALIDGY-----------CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             A  +L  M   GL+ ++ TY +L+  L +
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCK 510



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 44/325 (13%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEME-----VSHAKPNSFI--YSRILAGYRDRGEW 421
           D   + +       AG  + AR +  +M      +S    N FI   S  L G +     
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKI---- 236

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +V  E    GV  +T  YN++  +  +   +  A     +M   G  PD I+++T+
Sbjct: 237 --ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTV 294

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+ + + G   R  +L EEMQ +G  P   TYN +I LL +  +  + +R+L  M ++G+
Sbjct: 295 INGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 354

Query: 542 LPNVVTYTTLVDIYGQSG------RFDDAIE------------------CLEGLSDQAVN 577
            P+ V YTTL+D + + G      R  D ++                  C  G   +A  
Sbjct: 355 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 414

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M    L+P  +   +LI+ + ++ +  EAF++   M + GL P++VTYT L   L 
Sbjct: 415 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474

Query: 638 RVDK-------FHKVFSSYLFFNIY 655
           +  +        H++    L  NIY
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNIY 499


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 225/478 (47%), Gaps = 16/478 (3%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +SY ++ + +  A GR     E F     + + P  +TYN +I    +  DLE    L  
Sbjct: 64  FSYNVVIAGMWRA-GRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRD 122

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   + I Y++++  L R  ++  +    L  E+   K+  DG   + +  G ++
Sbjct: 123 QMVCHGLKPNAITYNVLLSGLCRAGRMGET--SALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD+   +   G     G++    T + ++  L   G+   AE V + L  +GL P    
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ GY + G L+ A     +M+   + PD  TY+ LI+    A R  +A+ +L EM+
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P    ++ ++  Y   G+ ++ F VL EM+ +G++P+   Y  +++ F K   + 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+A  D M  + + P+   +N +ID + + G  D+A  L E+M+  G  P   TYN++I
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L  Q +  + + ++ ++    L+P+ V+Y TL+           +  C  G  D+A++
Sbjct: 421 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI-----------SACCYRGNIDKALD 469

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             + M   G+K +    + LI+  G   R  E   + Q M +N + P    +  +++A
Sbjct: 470 LQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 527



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 214/467 (45%), Gaps = 16/467 (3%)

Query: 172 ALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY-HCDF 228
           +LGR   +  AF  L S   R     +N  + AC    DL +A+ ++ +M +DG    + 
Sbjct: 4   SLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 63

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
            +Y++VI  + R  +   ++  +++ E+    +  +    N +I G  K GD     R  
Sbjct: 64  FSYNVVIAGMWRAGRGGDAV--EVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 GL P   TY  +++ L  +GR  E  A+ +E+    + P    Y+ L  G  + 
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K    +  +  ++GV   ++T S+L++     G+   A  VL+ +  +   P   IY
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY   GE +  F    +MKS  ++PD   YN +I+   K   + +A      M  
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ P   T+NTLID + + G+ ++   +  EMQE G  P   +Y  ++N   +  +  +
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              +L +M  + +LPN   Y  ++D Y +            G +DQA      M+++G+ 
Sbjct: 362 AVAILDDMFHKDVLPNAQVYNAIIDAYVE-----------HGPNDQAFILVEKMKSNGIS 410

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           PS +  N LI       + +EA  ++  +  + L PD V+Y TL+ A
Sbjct: 411 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 457



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 187/404 (46%), Gaps = 47/404 (11%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA-TYAAVITALSNSGRTIEAEAVFEELK 327
           N  +     AGD  +A+  L      G  P  A +Y  VI  +  +GR  +A  VF+E+ 
Sbjct: 31  NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 90

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E  + P    YN ++ G++K G L+    +  +M   G+ P+  TY++L+     AGR  
Sbjct: 91  ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 150

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF---------------------- 425
               +L EM      P+ F YS +  G    G+ +                         
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 210

Query: 426 -------------QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                        +VL+ + ++G+ P    YN +I+ + +   L  A + F +M S  I+
Sbjct: 211 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 270

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N LI+   K  R   A++L  EMQ+ G  P   T+N +I+  G   + E    +
Sbjct: 271 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 330

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M+  GL PNVV+Y ++V+ + ++G+  +A+  L+ +  + V            P+  
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV-----------LPNAQ 379

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             N++I+A+ E   + +AF +++ MK NG+ P +VTY  L+K L
Sbjct: 380 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 153 LQKHNLCYSYE---LLYSILIHALGRSEKLYE-AFLLSQ--RQRLTP--LTYNALISACA 204
           L+   +C+  +   + Y++L+  L R+ ++ E + LL +   Q++ P   TY+ L    +
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN D +  L+L  K  ++G        S+++  L +  K+  S+ +++ + +    +   
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKV--SIAEEVLQSLVNAGLVPT 237

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             + N +I G+ + G+   A    G  +   + P   TY A+I  L  + R   A+ +  
Sbjct: 238 RVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLM 297

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E++++G+ P  + +N L+  Y + G L+    V+SEM+ +G+ P+  +Y  +++A+   G
Sbjct: 298 EMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 357

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +   A  +L +M      PN+ +Y+ I+  Y + G   + F ++++MKS+G+ P    YN
Sbjct: 358 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYN 417

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I      + +  A    + + +  + PD +++NTLI      G  D+A +L + M + 
Sbjct: 418 LLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKY 477

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           G      TY+ +I+ LG   R  +++ L   M    ++P+   +  +V+ Y + G
Sbjct: 478 GIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 12/365 (3%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK-A 337
           G  +   R  G+    G  P T  +   + A   +G   EA  +   +   G  P    +
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  + G   DA  V  EM    VLP+  TY+ +ID +   G  E+   +  +M 
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN+  Y+ +L+G    G    T  +L EM S  + PD   Y+++ D   +     
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             ++ F + L  G+     T + L++   K G+   AEE+ + +   G  P    YN +I
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N   +    E      G M+++ + P+ +TY  L++   ++ R  +A + L  + D  VN
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                      P+    N+LI+A+G   +  + F VL  M+ENGLKP+VV+Y +++ A  
Sbjct: 306 -----------PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 354

Query: 638 RVDKF 642
           +  K 
Sbjct: 355 KNGKI 359



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 162/339 (47%), Gaps = 12/339 (3%)

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           AL + GR  +    F  L  +G +P T A+N  ++  V  G L +A  ++  M R G  P
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 369 -DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            +  +Y+++I     AGR   A  V  EM      PN   Y+ ++ G+   G+ +  F++
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             +M   G++P+   YNV++    +   +    A  D M S+ + PD  T++ L D   +
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G       LF +  + G      T +I++N L +  +    + +L ++   GL+P  V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y TL++ Y Q+G        LEG    A + F  M++  +KP ++  N+LIN   + +R 
Sbjct: 241 YNTLINGYCQTGE-------LEG----AFSTFGQMKSRHIKPDHITYNALINGLCKAERI 289

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             A  +L  M++NG+ P V T+ TL+ A  R  +  K F
Sbjct: 290 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 178/392 (45%), Gaps = 12/392 (3%)

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH--NLCYSYELLYSILIHALGRSE 177
           S + VP    +S+L +  S N     + A++S   K+  N     +   SIL++ L +  
Sbjct: 161 SQKMVPDGFTYSILFDGLSRNGD---SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDG 217

Query: 178 KLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           K+  A  + Q      L P  + YN LI+   +  +LE A +   +M+      D I Y+
Sbjct: 218 KVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L +  +I ++  Q L  E++ + +    +  N +I  + + G   K    L   Q
Sbjct: 278 ALINGLCKAERITNA--QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 335

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P   +Y +++ A   +G+  EA A+ +++    + P  + YNA++  YV+ G   
Sbjct: 336 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 395

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  +V +M+ +G+ P   TY+LLI    N  +   A  ++  +      P++  Y+ ++
Sbjct: 396 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           +    RG   +   + + M   G++     Y+ +I   G    L+     + +M+   + 
Sbjct: 456 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 515

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           P     N +++ + K G   +AE+L +EM ++
Sbjct: 516 PSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 12/267 (4%)

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF- 442
           GR    R     +  + A+P++F +++ +      G+      +L+ M   G  P   F 
Sbjct: 6   GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 65

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YNV+I    +      A+  FD M    + P+ IT+NT+ID H K G  +    L ++M 
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TYN++++ L    R  +   LL  M +Q ++P+  TY+ L D   ++G   
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD-- 183

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                    S   ++ F     +G+   +   + L+N   +D + + A  VLQ +   GL
Sbjct: 184 ---------SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 234

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
            P  V Y TL+    +  +    FS++
Sbjct: 235 VPTRVIYNTLINGYCQTGELEGAFSTF 261


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 203/417 (48%), Gaps = 14/417 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ S+V+    ++ ++  +  ++L  E+    ++++    N ++  + +  D  +    L
Sbjct: 144 LSASVVVDGYCKSGRVAHA--RQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
            + +  G+ P   TY  ++  LS +    + EAVFEE+K   L      Y++++  Y + 
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G ++ A  V  E   +G+ P+EHTY  LI+ +   G+ E+A +++ +M+V     N  ++
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY  +    +  ++   M+  G+E D + YN +     + N +  A      M+ 
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G+ P+ +++ TLI  H   G    A  LF EM   G  P   TYN+M++   ++    +
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +R    M  +GL+P++ +Y  LV  +G          C+ G  D A+  F  M+  G K
Sbjct: 442 AERFKNEMEKKGLVPDIYSYAALV--HGH---------CVNGKVDVALRLFEEMKQRGSK 490

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           P+ +A  +LI+   ++ R  EAF +   M  +GL PD   Y+ L+ +L   DK   V
Sbjct: 491 PNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL-HTDKKQNV 546



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 33/368 (8%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           TA Y  +  A ++SG    A   FE    +  GL PR+   + L     + G+L  A  +
Sbjct: 72  TAFYDMLFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSL--RRAGHLDTAADL 129

Query: 358 VSEMERSGVLPDEHT---YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +   S   PD  T    S+++D Y  +GR   AR +L EM     K N+  Y+ +L  
Sbjct: 130 LKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDA 187

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y    +  R  ++LK M++ G+EP    Y +++D       +    A F+ M S+ +  D
Sbjct: 188 YTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGD 247

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
              ++++I+ + + G   RA E+F+E    G  P   TY  +IN   +  + E  + L+ 
Sbjct: 248 VYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVT 307

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLS------------------- 572
           +M+ +G+  N + + T++D Y +    D A+E    +E +                    
Sbjct: 308 DMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRAN 367

Query: 573 --DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             D+A N  R+M   G++P++++  +LI+    +    EA  + + M  NG +P +VTY 
Sbjct: 368 RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427

Query: 631 TLMKALIR 638
            +M   I+
Sbjct: 428 VMMDGYIK 435



 Score = 42.4 bits (98), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 543 PNVVT---YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           P+ VT    + +VD Y +SGR   A + L+            M   G+K + L  NSL++
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDE-----------MPRHGVKVNALCYNSLLD 186

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           A+  ++ D     +L+ M+  G++P V TYT L+  L       KV
Sbjct: 187 AYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKV 232


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 237/524 (45%), Gaps = 28/524 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQRQ 189
           L+K  CS +    L +A+ ++ +   L +   ++ ++ L+H L   +++ EA  L  Q  
Sbjct: 122 LMKCFCSCSK---LPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC 178

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           +   +T+  L++   R   + +A+ L+ +M +DG   + I Y  ++  + +     S+L 
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL- 237

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L K  E   I  +  + N +I G  K G  S A       Q   + P   TY  +I  
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              SGR  +AE + +E+ E  + P    ++AL+  +VK G   +AE +  EM    ++P 
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS +ID +    R ++A  +          P+   ++ ++AGY          ++L 
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM  +G+  +T  Y  +I  F +   L+ A      M+S G+ P+ +T NTL+D     G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 490 RYDRAEELFEEMQE-----------RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +   A E+F+ MQ+            G  P   TYNI+I  L  + ++ + + L   M  
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G++P+ +TY++++D   +  R D+A +            F  M +    P  +  N+LI
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQ-----------MFDSMGSKSFSPDVVTFNTLI 586

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             + +     +   +   M + G+  D +TY TL+    +VD  
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNI 630



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 264/609 (43%), Gaps = 92/609 (15%)

Query: 72  DDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWH- 130
           D V+SL K+       +  L    N+ S + L     S +++ F L+ ++  +    +H 
Sbjct: 98  DVVISLHKK-------MEMLRMPCNAYSFTILMKCFCSCSKLPFALS-TFGKITKLGFHP 149

Query: 131 ------SLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
                 +LL  LC  +    ++DL          H +C    + ++ L++ L R  ++ E
Sbjct: 150 TVVTFNTLLHGLCVEDRISEALDLF---------HQMCKPNVVTFTTLMNGLCREGRVVE 200

Query: 182 AFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC-DFINYSLVI 235
           A  L  R     L P  +TY  ++    +  D   ALNL+ KM +  +   + + Y+ +I
Sbjct: 201 AVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTII 260

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
             L +  +   S    L+ E++  +I  D    N +I GF  +G  S A + L       
Sbjct: 261 DGLWKDGR--HSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           ++P   T++A+I A    G+  EAE +++E+    + P T  Y++++ G+ K   L  AE
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378

Query: 356 F-----------------------------------VVSEMERSGVLPDEHTYSLLIDAY 380
                                               ++ EM  +G++ +  TY+ LI  +
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS------ 434
              G   +A+ +L+EM  S   PN    + +L G  D G+ +   ++ K M+ S      
Sbjct: 439 CQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 498

Query: 435 -----GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                GVEPD   YN++I           A   ++ M   GI PDTIT++++ID   K  
Sbjct: 499 SRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 558

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A ++F+ M  + + P   T+N +I    +    +D   L   M  +G++ + +TY 
Sbjct: 559 RLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYI 618

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL  IYG   R  D I       D A++ F+ M + G+ P  + + +++      +    
Sbjct: 619 TL--IYGF--RKVDNI-------DGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELER 667

Query: 610 AFAVLQYMK 618
           A A+L+ ++
Sbjct: 668 AVAMLEDLQ 676



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 152/345 (44%), Gaps = 16/345 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++  +   GR     ++ ++++   +     ++  L+K +     L  A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             ++ + G  P   T++ L+       R   A  +  +M     KPN   ++ ++ G   
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTI 476
            G       +L  M   G++P+   Y  ++D   K      A+    +M     I P+ +
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +NT+ID  +K GR+  A  LF EMQE+  FP   TYN MIN      RW D ++LL  M
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + + P+VVT++ L++ + + G+F +A    E L D+       M    + PS +  +S
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEA----EELYDE-------MLPRSIIPSTVTYSS 363

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +I+ F +  R   A  +       G  PD++T+ TL+    R  +
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR 408



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 141/311 (45%), Gaps = 16/311 (5%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +  L+   V+MG       +  +ME   +  + +++++L+  + +  +   A   
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             ++      P    ++ +L G            +  +M     +P+   +  +++   +
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF-PCTT 511
              +  A+A  DRML +G++P+ IT+ T++D   K G    A  L  +M+E  +  P   
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
            YN +I+ L +  R  D   L   M+ + + P++VTY  +++ +  SGR+ DA + L+ +
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            ++ +N           P  +  ++LINAF ++ +  EA  +   M    + P  VTY++
Sbjct: 315 LERKIN-----------PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363

Query: 632 LMKALIRVDKF 642
           ++    + ++ 
Sbjct: 364 MIDGFCKQNRL 374



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 16/303 (5%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L DA  +   M RS  LP    +  L+      GR +    + K+ME+  
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N++ ++ ++  +    +         ++   G  P    +N ++      + +  A+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M     +P+ +T+ TL++   + GR   A  L + M E G  P   TY  +++ +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 521 GEQERWEDVKRLLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            +         LL  M     ++PNVV Y T++D   + GR  DA            N F
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDA-----------HNLF 276

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+   + P  +  N +IN F    R ++A  +LQ M E  + PDVVT++ L+ A ++ 
Sbjct: 277 IEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKE 336

Query: 640 DKF 642
            KF
Sbjct: 337 GKF 339



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 17/326 (5%)

Query: 124 VPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           +P+ + + S++   C  N  +D A  +  +L     C    + ++ LI    R++++ + 
Sbjct: 355 IPSTVTYSSMIDGFCKQNR-LDAAEHMF-YLTPTKGCSPDIITFNTLIAGYCRAKRVDDG 412

Query: 183 FLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             L        L     TY  LI    +  DL  A +L+ +M   G   + +  + ++  
Sbjct: 413 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDG 472

Query: 238 LTRTNKIDSSL-----LQKLYKEIECDK----IELDGQLLNDVIVGFAKAGDASKAMRFL 288
           L    K+  +L     +QK   +I+  +    +E D Q  N +I G    G   +A    
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 G+ P T TY+++I  L    R  EA  +F+ +      P    +N L+ GY K 
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G + D   +  EM + G++ D  TY  LI  +      + A  + +EM  S   P++   
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITI 652

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSS 434
             +L G   + E +R   +L++++ S
Sbjct: 653 RNMLTGLWSKEELERAVAMLEDLQMS 678


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 221/472 (46%), Gaps = 25/472 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N LI    RN ++ +A+ L+  M+ +G   D + Y+ ++    +   + ++  +KL  E
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA--KKLMGE 77

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           I    +E +      +I  + K+     A+          L P   TY  ++  L  SG+
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA++VF E++E G+ P   +Y  L+    K G + +A  +   M   G+  D   Y+ 
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+D    AG   +A  + + +      PN   YS ++ G+   G+  +   +L+EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y+ ++D + K   L+ AM    +M+   I P+   + TLID +FK  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF+EM+ RG        +  +N L    R E+   L  +M ++GLLP+ V YT+++D +
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 556 GQSGRFDDAIECLEGLSDQA----VNAFRV-------------------MRTDGLKPSNL 592
            ++G+  DA    + +++++    V A+ V                   MR  GL P + 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSA 437

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             N++INA+ ++     A  +L  MK  GLKP+ +T   L++ L    +  K
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 11/380 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G+ + G+ S+A+  L   +  G +P   TY  ++      G    A+ +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
              L+P    Y  L+  Y K   L+DA ++  EM    ++PD  TY+ +++    +G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A+ V +EME     PN F Y+ ++      G     F +   M   G+  D   Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K    ++A   F  +L E + P+ +T++ LID H K G  ++ E L +EM+E+  F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    Y+ +++   ++    +   ++  M  + +LPNV  Y TL+D Y ++ +       
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ------- 312

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G+   A++ F+ M++ GL+ +N  ++S +N      R  EA  + + M   GL PD V
Sbjct: 313 -RGI---ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 628 TYTTLMKALIRVDKFHKVFS 647
            YT++M    +  K    F+
Sbjct: 369 NYTSMMDGFFKAGKESDAFN 388



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 216/515 (41%), Gaps = 62/515 (12%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  LI A  ++  LE AL +  +M       D + Y+ ++  L ++ K++ +  + ++
Sbjct: 88  ITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA--KSVF 145

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+E   +  +      +I    K G+ ++A    G     G+      Y A++  L  +
Sbjct: 146 REMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKA 205

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    AE +F+ L E  L P    Y+AL+ G+ K+G +   E ++ EME   + P+   Y
Sbjct: 206 GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S ++D Y   G    A  V+++M   +  PN F+Y  ++ GY    +      + KEMKS
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+E +    +  ++   +   +  A   F  M+S G+ PD + + +++D  FK G+   
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  + +EM E+        YN++IN L +  ++E      G MR  GL P+  T+ T+++
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG-MRQLGLAPDSATFNTMIN 444

Query: 554 IYGQSGRFDDAIE------------------------CLEG--------LSDQAVNAF-- 579
            Y + G   +A++                        C  G        L+D  V  F  
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 580 -------------RVMRTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                        +  R D            G+K      N+LI+ F        A  V 
Sbjct: 505 TPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVF 564

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + M   G+  D++TY  L+          K F+ +
Sbjct: 565 KDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 227/536 (42%), Gaps = 65/536 (12%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI A  +S+ L +A  +      + L P  +TY  +++   ++  +E+A ++  +
Sbjct: 88  ITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   +  +Y+ +I SL +   +  + +  L   +    I  D  +   ++ G  KA
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFV--LQGRMVVRGIGFDVVVYTALMDGLFKA 205

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G A+ A     +     L P   TY+A+I      G   + E + +E++E  + P    Y
Sbjct: 206 GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++++ GY K G L +A  V+ +M +  +LP+   Y  LID Y  A +   A  + KEM+ 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK------ 452
              + N+F+    +   +  G  +   ++ K+M S G+ PD   Y  M+D F K      
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 453 -------------------YNCLHHAMAAFDRMLSE---------GIEPDTITWNTLIDC 484
                              YN L + +    +  SE         G+ PD+ T+NT+I+ 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G    A +L  EM+  G  P + T NI++  L      E    LL +M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
             T+  ++D   +S R D  +                         C  G+  +A   F+
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G+    +  N+LI+ +       +AFAV   M   G+ P+V TY  L+  L
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 182/409 (44%), Gaps = 62/409 (15%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQ-RLTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y++LI+ L   G+ E   E+F    RQ  L P   T+N +I+A  +  +L  AL L+++M
Sbjct: 405 YNVLINGLFKLGKYES--ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV-GF--- 275
           +  G   + I  ++++Q L    +I+ ++                  LLND++V GF   
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTM-----------------DLLNDMLVMGFHPT 505

Query: 276 -----------AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                      +K+  A   +       G+G+    +TY  +I+     G    A  VF+
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++   G+      YNAL+ GY    +LK A  V S+M   GV P+  TY++L+   + A 
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             + A  ++ +M+     PN+  Y  +++G+   G  +   ++  EM + G  P T  YN
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD------------ 492
           V+I  F K   +  A      M   GI P++ T++ LI     CG Y             
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI-----CGWYKLSKQPELNKSLK 740

Query: 493 -----RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
                 A+ LFEEM E+G+ PC  T   +   L +  +  D +R+L  +
Sbjct: 741 RSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 11/384 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E+  E F     + L P  + Y +++    +      A N+  +M +     D + Y
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I  L +  K +S       +++    +  D    N +I  + K G+   A++ L   
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQL---GLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL P + T   ++  L  +G   +   +  ++   G  P    + A+L    K    
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS--- 519

Query: 352 KDAEFVV---SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           + A+ ++    ++   GV  D  TY+ LI  +   G    A +V K+M       +   Y
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY      ++ F V  +M + GV P+   YN+++        +  A    ++M  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ P+  T++ L+  H K G      +L+ EM  +G+ P T TYN++I+   + ++   
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLV 552
            K L+  M+ +G+ PN  TY  L+
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILI 723



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +N++I+             LL  M+ +G  P++VTY TL++ + + G    A + +  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
              VN         L+P+ +   +LI+A+ + Q   +A  +   M    L PDVVTYT +
Sbjct: 80  --LVN---------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 633 MKALIRVDKFHKVFSSY 649
           M  L +  K  +  S +
Sbjct: 129 MNGLCKSGKVEEAKSVF 145


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 240/528 (45%), Gaps = 32/528 (6%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           +L N+C         +D+A+     ++ H L    ++ Y+ +I  L +  +L EA   F 
Sbjct: 269 VLYNVCIDCFGKAGKVDMAWKFFHEIKSHGL-LPDDVTYTSMIGVLCKGNRLDEAVEIFE 327

Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             ++ R  P  Y  N +I         ++A +L+ + +  G     I Y+ ++  L +  
Sbjct: 328 QMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKG 387

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++  +L  + ++E++ D    +    N +I    KAG+   A +     +  GL P   T
Sbjct: 388 RLGEAL--RTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              +I  L  + +  EA ++FE +      P    + +L+ G  K G + DA  +  +M 
Sbjct: 445 VNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML 504

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD----R 418
            S  +P+   Y+ LI ++   GR E    + KEM      P+     R+L  Y D     
Sbjct: 505 DSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDL----RLLNAYMDCVFKA 560

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           GE  +   + +E+KS G  PD   Y+++I    K          F  M  +G   DT  +
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NT ID   K G+ ++A +L EEM+ +G  P   TY  +I+ L + +R ++   L    ++
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 680

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            GL  NVV Y++L+D +G+ GR D+A   +E L  +           GL P+    N L+
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK-----------GLTPNVYTWNCLL 729

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +A  + +   EA    Q MK     P+ +TY+ L+  L RV KF+K F
Sbjct: 730 DALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAF 777



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 221/487 (45%), Gaps = 19/487 (3%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           L++ +I    R  +L  A  L    +   L      YN  I    +   ++ A     ++
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  G   D + Y+ +I  L + N++D ++  ++++++E ++        N +I+G+  AG
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAV--EIFEQMEQNRNVPCAYAYNTMIMGYGSAG 352

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A   L   +  G  P    Y  ++T L   GR  EA   FEE+K+    P    YN
Sbjct: 353 KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYN 411

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+    K G ++ A  V   M+ +G+ P+  T +++ID    A + + A  + + M   
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   +  ++ G   +G     +++ ++M  S   P+   Y  +I +F K       
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M+  G  PD    N  +DC FK G   +   LFEE++ RG+ P   +Y+I+I+ 
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +     +   L   M+ QG + +   Y T +D + +SG+ + A + LE          
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE--------- 642

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+T G +P+ +   S+I+   +  R  EA+ + +  K NGL+ +VV Y++L+    +V
Sbjct: 643 --MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 640 DKFHKVF 646
            +  + +
Sbjct: 701 GRIDEAY 707



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/560 (23%), Positives = 235/560 (41%), Gaps = 51/560 (9%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+  E  R VP    ++ +     S    D AY+++   QK   C    + Y+ ++  LG
Sbjct: 326 FEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE-RQKARGCIPSVIAYNCILTCLG 384

Query: 175 RSEKLYEAFLLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           +  +L EA    +  +        TYN LI    +  ++E A  +   M++ G   + + 
Sbjct: 385 KKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444

Query: 231 YSLVIQSLTRTNKID---------------------SSLLQKLYKE-------------I 256
            +++I  L +  K+D                      SL+  L K+             +
Sbjct: 445 VNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML 504

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           + DKI  +  +   +I  F K G      +        G SP      A +  +  +G T
Sbjct: 505 DSDKIP-NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGET 563

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +  A+FEE+K  G  P   +Y+ L+ G VK G+ ++   +   M+  G + D H Y+  
Sbjct: 564 GKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTF 623

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ID +  +G+   A  +L+EM+    +P    Y  ++ G          + + +E KS+G+
Sbjct: 624 IDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGL 683

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           E +   Y+ +ID FGK   +  A    + ++ +G+ P+  TWN L+D   K    + A  
Sbjct: 684 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALV 743

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
            F+ M+     P   TY+I+IN L    ++         M+ QGL PN +TYTT++    
Sbjct: 744 CFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLA 803

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++G              +A + F   + +G  P + + N++I      +R  EA+ + + 
Sbjct: 804 KAGNI-----------AEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEE 852

Query: 617 MKENGLKPDVVTYTTLMKAL 636
            +  G      T   L+ AL
Sbjct: 853 TRMKGCNIHTKTCIALLDAL 872



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 228/513 (44%), Gaps = 35/513 (6%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPL--TYNALISACARNDDLEKALNLMSKMRQDG 223
           LI +  +S KL E F L Q  R     P    Y  LI A +   + +  L L  +M++ G
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELG 228

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y      ++ VI+   R  ++D++L   L  E++ + +  D  L N  I  F KAG    
Sbjct: 229 YEVSVHLFTTVIRVFAREGRLDAAL--SLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDM 286

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   TY ++I  L    R  EA  +FE+++++   P   AYN ++ 
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIM 346

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY   G   +A  ++   +  G +P    Y+ ++      GR   A    +EM+   A P
Sbjct: 347 GYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAP 405

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   Y+ ++      GE +  F+V   MK +G+ P+    N+MID   K   L  A + F
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  +   PD +T+ +LID   K GR D A  L+E+M +    P    Y  +I    + 
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY---GQSGRFDDAIECLE----------- 569
            R ED  ++   M  +G  P++      +D     G++G+     E ++           
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSY 585

Query: 570 ----------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                     G + +    F  M+  G      A N+ I+ F +  +  +A+ +L+ MK 
Sbjct: 586 SILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT 645

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            G +P VVTY +++  L ++D+  +   +Y+ F
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLDE---AYMLF 675



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 196/436 (44%), Gaps = 44/436 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           ++  LC +   +D A ++   +  H +C   E+ +  LI  LG+  ++ +A+     +L 
Sbjct: 448 MIDRLCKAKK-LDEACSIFEGMN-HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505

Query: 187 QRQRLTPLTYNALISA---CARNDDLEKALN----------------------------- 214
             +    + Y +LI +   C R +D  K                                
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGK 565

Query: 215 ---LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
              L  +++  G+  D ++YS++I  L +      +   +L+  ++     LD    N  
Sbjct: 566 GRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETY--ELFYAMKEQGCVLDTHAYNTF 623

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I GF K+G  +KA + L   +  G  P   TY +VI  L+   R  EA  +FEE K +GL
Sbjct: 624 IDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGL 683

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +     Y++L+ G+ K+G + +A  ++ E+ + G+ P+ +T++ L+DA   A     A +
Sbjct: 684 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALV 743

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
             + M+     PN   YS ++ G     ++ + F   +EM+  G++P+T  Y  MI    
Sbjct: 744 CFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLA 803

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A + F+R  + G  PD+ ++N +I+      R   A ++FEE + +G    T 
Sbjct: 804 KAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTK 863

Query: 512 TYNIMINLLGEQERWE 527
           T   +++ L + E  E
Sbjct: 864 TCIALLDALQKDECLE 879



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 190/411 (46%), Gaps = 32/411 (7%)

Query: 270 DVIVG-FAKAGDASKAM---RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           D+++G   +A D ++A+   R+        L P+   Y +++  ++ + +    E +  E
Sbjct: 96  DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEA--YDSLLLVMAKNVKFDYFEQILGE 153

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +  +G  P TK    L+   +K   L++   ++  M +    P    Y+ LI A ++   
Sbjct: 154 MSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQE 213

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            +    +  +M+    + +  +++ ++  +   G       +L EMKS+ +  D   YNV
Sbjct: 214 SDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNV 273

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            ID FGK   +  A   F  + S G+ PD +T+ ++I    K  R D A E+FE+M++  
Sbjct: 274 CIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             PC   YN MI   G   ++++   LL   +A+G +P+V+ Y  ++   G+ GR  +A+
Sbjct: 334 NVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEAL 393

Query: 566 ECLEGL-SDQAVN-------------------AFRV---MRTDGLKPSNLALNSLINAFG 602
              E +  D A N                   AF+V   M+  GL P+ + +N +I+   
Sbjct: 394 RTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLC 453

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
           + ++  EA ++ + M      PD VT+ +L+  L    RVD  ++++   L
Sbjct: 454 KAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQML 504



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 7/299 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQR--LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YSILIH L   G + + YE F   + Q   L    YN  I    ++  + KA  L+ +M+
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y  VI  L + +++D + +  L++E + + +EL+  + + +I GF K G 
Sbjct: 645 TKGRQPTVVTYGSVIDGLAKIDRLDEAYM--LFEEAKSNGLELNVVIYSSLIDGFGKVGR 702

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +      GL+P   T+  ++ AL  +    EA   F+ +K     P    Y+ 
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  ++     A     EM++ G+ P+  TY+ +I   A AG    A  + +  + + 
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             P+S  Y+ I+ G          +++ +E +  G    T     ++D   K  CL  A
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 10/249 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  +I  L + ++L EA++L +  +     L  + Y++LI    +   +++A  +M ++ 
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   +   ++ ++ +L +  +I+ +L+   ++ ++  K   +    + +I G  +   
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALV--CFQNMKNLKGTPNHITYSILINGLCRVRK 772

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            +KA  F    Q  GL P T TY  +I  L+ +G   EA ++FE  K +G  P + +YNA
Sbjct: 773 FNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNA 832

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI---VLKEME 397
           +++G        +A  +  E    G      T   L+DA       E A I   VL+E+ 
Sbjct: 833 IIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIA 892

Query: 398 VSHAKPNSF 406
            S     S+
Sbjct: 893 KSQHAARSW 901


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 235/545 (43%), Gaps = 66/545 (12%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
            +Y+ +I++L ++ KL EA   F +   + L P  +TY  LI    R   L+ A    +K
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G      +Y+ +I    +  K+  + L  L+KE+    ++        +I G+ K 
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAEL--LFKEMVDKGLKPTVATYTSLISGYCKD 483

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA +      G G++P T T+ A+I  L    +  EA  +F+E+ E  + P    Y
Sbjct: 484 GLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTY 543

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L++G+ + G    A  ++ EM + G+ PD +TY  LI    + GR   A+  + ++  
Sbjct: 544 NVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHH 603

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRT---------------------------------- 424
            H + +   Y+ +L G+   G  +                                    
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL 663

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F++L+EM   G++PD   Y ++ID F K   L  A   +  M+ EG  P+++T+  L++ 
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNG 723

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            FK G  + A+ LF+ M      P   TY   ++ L ++   E+  + L N   QG   N
Sbjct: 724 LFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ-LHNAMLQGSFAN 782

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
            VTY  L+  Y Q G+F +A +                        C  G  D A++ + 
Sbjct: 783 TVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWE 842

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   GLKP  +  N LI+A   +     A  +   M   GLKP   TY +LM  L +  
Sbjct: 843 CMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902

Query: 641 KFHKV 645
           +  +V
Sbjct: 903 RLTQV 907



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 212/456 (46%), Gaps = 14/456 (3%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L+ +TYN  I+   ++  + +A+ +   + + G   D + Y  ++  L R  + +  + +
Sbjct: 258 LSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGM-E 316

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            + + IE   +  +  + + +I G  K G    A   L     +G+ P    Y ++I +L
Sbjct: 317 MMDEMIELGYVPSEAAV-SGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSL 375

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             +G+  EAE +F  + E GL P    Y  L+ G+ +   L  A +  ++M   G+    
Sbjct: 376 CKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATV 435

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           ++Y+ +I+     G+ + A ++ KEM     KP    Y+ +++GY   G   + F++  E
Sbjct: 436 YSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHE 495

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+ P+T  +  +I    + N +  A   FD M+   I P+ +T+N LI+ H + G 
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             RA EL +EM ++G  P T TY  +I  L    R  + K  + ++  +    + + YT 
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  +           C EG   +A+ A + M   GL+   ++   LI+    +Q D   
Sbjct: 616 LLQGF-----------CKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRIL 663

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           F +L+ M   G++PD V YT L+   I+     K F
Sbjct: 664 FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAF 699



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 209/481 (43%), Gaps = 24/481 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           + +LI    +++++ +  L+    R   L P   T +AL++A AR     + L L   + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG- 279
             G   D   Y++V++ L      + +  +++  + E +   L     N  I G  K+  
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKA--KEIINQAEGNGCSLSIVTYNVFINGLCKSKR 275

Query: 280 --DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             +A +  R LG     GL     TY  ++  L           + +E+ E G  P   A
Sbjct: 276 VWEAVEVKRSLGEK---GLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAA 332

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            + L++G +KMG ++ A  +++++ + GV+P+   Y+ +I++    G+ E A ++   M 
Sbjct: 333 VSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMA 392

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN   Y+ ++ G+  R +    F    +M   G+    + YN MI+   K+  + 
Sbjct: 393 ERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMK 452

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  M+ +G++P   T+ +LI  + K G   +A +L+ EM  +G  P T T+  +I
Sbjct: 453 MAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALI 512

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L +  +  +  +L   M    +LPN VTY  L++ +           C EG + +A  
Sbjct: 513 CGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH-----------CREGNTTRAFE 561

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M   GL P       LI       R +EA   +  +     + D + YT L++   
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621

Query: 638 R 638
           +
Sbjct: 622 K 622



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 171/404 (42%), Gaps = 42/404 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L +  K+ EA  L       ++ P  +TYN LI    R  +  +A  L+ +M 
Sbjct: 508 FTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMI 567

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y  +I  L  T ++  +  ++   ++      LD      ++ GF K G 
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEA--KEFINDLHHKHQRLDELCYTALLQGFCKEGR 625

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+       G GL     +YA +I+   N    I  E +  E+   G++P    Y  
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE-LLREMHGKGMQPDNVIYTI 684

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K G LK A      M   G +P+  TY+ L++    AG    A+++ K M V  
Sbjct: 685 LIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE 744

Query: 401 AKPN----------------------------------SFIYSRILAGYRDRGEWQRTFQ 426
           A PN                                  +  Y+ ++ GY   G++Q   +
Sbjct: 745 AIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAK 804

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L  M   G+ PD   Y+  I  + K   +  AM  ++ ML  G++PD + +N LI    
Sbjct: 805 LLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACC 864

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             G  DRA +L  +M  RG  P  +TY+ ++  L ++ R   V+
Sbjct: 865 LNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 156/366 (42%), Gaps = 49/366 (13%)

Query: 322 VFEELKESGLKPR---TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           +FE   ES  K +   +  ++ L++ YV+   + D   VV+ M   G+LP+  T S L++
Sbjct: 139 IFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLN 198

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A A   ++     +   +  +  KP+ +IY+ ++    +  ++ +  +++ + + +G   
Sbjct: 199 ALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSL 258

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               YNV I+   K   +  A+     +  +G++ D +T+ TL+    +   ++   E+ 
Sbjct: 259 SIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMM 318

Query: 499 EEMQERGYFPCTT-----------------------------------TYNIMINLLGEQ 523
           +EM E GY P                                       YN MIN L + 
Sbjct: 319 DEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKT 378

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            + E+ + L   M  +GL PN VTYT L+D +G+  + D A              F  M 
Sbjct: 379 GKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFY-----------YFNKMI 427

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             G+  +  + NS+IN   +  +   A  + + M + GLKP V TYT+L+    +     
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 644 KVFSSY 649
           K F  Y
Sbjct: 488 KAFKLY 493


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 221/472 (46%), Gaps = 25/472 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N LI    RN ++ +A+ L+  M+ +G   D + Y+ ++    +   + ++  +KL  E
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA--KKLMGE 77

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           I    +E +      +I  + K+     A+          L P   TY  ++  L  SG+
Sbjct: 78  ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA++VF E++E G+ P   +Y  L+    K G + +A  +   M   G+  D   Y+ 
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+D    AG   +A  + + +      PN   YS ++ G+   G+  +   +L+EM+   
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y+ ++D + K   L+ AM    +M+   I P+   + TLID +FK  +   A 
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIAL 317

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF+EM+ RG        +  +N L    R E+   L  +M ++GLLP+ V YT+++D +
Sbjct: 318 DLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGF 377

Query: 556 GQSGRFDDAIECLEGLSDQA----VNAFRV-------------------MRTDGLKPSNL 592
            ++G+  DA    + +++++    V A+ V                   MR  GL P + 
Sbjct: 378 FKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSA 437

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             N++INA+ ++     A  +L  MK  GLKP+ +T   L++ L    +  K
Sbjct: 438 TFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 181/380 (47%), Gaps = 11/380 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G+ + G+ S+A+  L   +  G +P   TY  ++      G    A+ +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
              L+P    Y  L+  Y K   L+DA ++  EM    ++PD  TY+ +++    +G+ E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A+ V +EME     PN F Y+ ++      G     F +   M   G+  D   Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K    ++A   F  +L E + P+ +T++ LID H K G  ++ E L +EM+E+  F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    Y+ +++   ++    +   ++  M  + +LPNV  Y TL+D Y ++ +       
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ------- 312

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G+   A++ F+ M++ GL+ +N  ++S +N      R  EA  + + M   GL PD V
Sbjct: 313 -RGI---ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRV 368

Query: 628 TYTTLMKALIRVDKFHKVFS 647
            YT++M    +  K    F+
Sbjct: 369 NYTSMMDGFFKAGKESDAFN 388



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 216/515 (41%), Gaps = 62/515 (12%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  LI A  ++  LE AL +  +M       D + Y+ ++  L ++ K++ +  + ++
Sbjct: 88  ITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA--KSVF 145

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+E   +  +      +I    K G+ ++A    G     G+      Y A++  L  +
Sbjct: 146 REMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKA 205

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    AE +F+ L E  L P    Y+AL+ G+ K+G +   E ++ EME   + P+   Y
Sbjct: 206 GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S ++D Y   G    A  V+++M   +  PN F+Y  ++ GY    +      + KEMKS
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+E +    +  ++   +   +  A   F  M+S G+ PD + + +++D  FK G+   
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  + +EM E+        YN++IN L +  ++E      G MR  GL P+  T+ T+++
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG-MRQLGLAPDSATFNTMIN 444

Query: 554 IYGQSGRFDDAIE------------------------CLEG--------LSDQAVNAF-- 579
            Y + G   +A++                        C  G        L+D  V  F  
Sbjct: 445 AYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHP 504

Query: 580 -------------RVMRTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                        +  R D            G+K      N+LI+ F        A  V 
Sbjct: 505 TPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVF 564

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + M   G+  D++TY  L+          K F+ +
Sbjct: 565 KDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 227/536 (42%), Gaps = 65/536 (12%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI A  +S+ L +A  +      + L P  +TY  +++   ++  +E+A ++  +
Sbjct: 88  ITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFRE 147

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   +  +Y+ +I SL +   +  + +  L   +    I  D  +   ++ G  KA
Sbjct: 148 MEEVGVVPNRFSYATLIDSLFKEGNVAEAFV--LQGRMVVRGIGFDVVVYTALMDGLFKA 205

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G A+ A     +     L P   TY+A+I      G   + E + +E++E  + P    Y
Sbjct: 206 GMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++++ GY K G L +A  V+ +M +  +LP+   Y  LID Y  A +   A  + KEM+ 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK------ 452
              + N+F+    +   +  G  +   ++ K+M S G+ PD   Y  M+D F K      
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 453 -------------------YNCLHHAMAAFDRMLSE---------GIEPDTITWNTLIDC 484
                              YN L + +    +  SE         G+ PD+ T+NT+I+ 
Sbjct: 386 AFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINA 445

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G    A +L  EM+  G  P + T NI++  L      E    LL +M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
             T+  ++D   +S R D  +                         C  G+  +A   F+
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G+    +  N+LI+ +       +AFAV   M   G+ P+V TY  L+  L
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 168/384 (43%), Gaps = 11/384 (2%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E+  E F     + L P  + Y +++    +      A N+  +M +     D + Y
Sbjct: 346 GRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I  L +  K +S       +++    +  D    N +I  + K G+   A++ L   
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQL---GLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  GL P + T   ++  L  +G   +   +  ++   G  P    + A+L    K    
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS--- 519

Query: 352 KDAEFVV---SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           + A+ ++    ++   GV  D  TY+ LI  +   G    A +V K+M       +   Y
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY      ++ F V  +M + GV P+   YN+++        +  A    ++M  
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ P+  T++ L+  H K G      +L+ EM  +G+ P T TYN++I+   + ++   
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLV 552
            K L+  M+ +G+ PN  TY  L+
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILI 723



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +N++I+             LL  M+ +G  P++VTY TL++ + + G    A + +  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
              VN         L+P+ +   +LI+A+ + Q   +A  +   M    L PDVVTYT +
Sbjct: 80  --LVN---------LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128

Query: 633 MKALIRVDKFHKVFSSY 649
           M  L +  K  +  S +
Sbjct: 129 MNGLCKSGKVEEAKSVF 145


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 245/525 (46%), Gaps = 65/525 (12%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLY 180
           V A  +  LLK LC+   + D    V+  + + + C       +IL+  L    RS++  
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS-CMPDVFSCTILLKGLCDENRSQEAL 178

Query: 181 EAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           E   +    R     P  ++Y  +I+   +  D +KA +   +M       D + YS +I
Sbjct: 179 ELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSII 238

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  +    N ++ G+  +    +A+ FL   + 
Sbjct: 239 AALCKGQAMDKAMEVLTTMVK----NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY +++  L  +GR+ EA  +F+ + + GL+P    Y  LL+GY   G L +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD H +++LI AYA   + + A +V  +M                 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM----------------- 397

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                             +  G+ P+   Y  +I    K   +  AM  F++M+ EG+ P
Sbjct: 398 ------------------RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 474 DTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           + I + +LI   C F   ++D+AEEL  EM +RG    T  +N +I+   ++ R  + ++
Sbjct: 440 NIIVYTSLIHSLCIFD--KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M   G+ PNV+TY+TL+D Y  +G+ D+A + L  +       F V    G+KP  
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-------FSV----GMKPDC 546

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N+LIN +    R  +A A+ + M  +G+ P+++TY  +++ L
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 217/493 (44%), Gaps = 52/493 (10%)

Query: 190 RLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT---RTNKI 244
           ++TP   TY  LI  C R   L+     +  + + G+  + I ++ +++ L    RT+  
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 245 DSSLLQKLYKEIEC---------------------DKIELDGQLLND------------- 270
              +L+++  E+ C                     + +EL   + +D             
Sbjct: 142 MDIVLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 271 -VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            VI GF K GD+ KA           +SP   TY+++I AL       +A  V   + ++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    YN++L GY      K+A   + +M   GV PD  TY+ L+D     GR   A
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           R +   M     +P+   Y  +L GY  +G       +L  M  +G+ PD H +N++I  
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  AM  F +M   G+ P+ +T+  +I    K G  D A   FE+M + G  P 
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Y  +I+ L   ++W+  + L+  M  +G+  N + + +++  +           C E
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH-----------CKE 489

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G   ++   F +M   G+KP+ +  ++LI+ +    +  EA  +L  M   G+KPD VTY
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 630 TTLMKALIRVDKF 642
            TL+    RV + 
Sbjct: 550 NTLINGYCRVSRM 562



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 229/501 (45%), Gaps = 31/501 (6%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+     G S+K Y  +     +R++P  +TY+++I+A  +   ++KA+ +++ M 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   + + Y+ ++     + +   ++     K++  D +E D    N ++    K G 
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAI--GFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +++A +        GL P  ATY  ++   +  G  +E  A+ + +  +G+ P    +N 
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  Y K   + +A  V S+M + G+ P+  TY  +I     +G  + A +  ++M    
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN  +Y+ ++       +W +  +++ EM   G+  +T F+N +I +  K   +  + 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M+  G++P+ IT++TLID +   G+ D A +L   M   G  P   TYN +IN  
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
               R +D   L   M + G+ PN++TY  ++     + R   A E              
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C   L+D+A+  F+ +    L+      N +I A  +  R+ EA  +   
Sbjct: 617 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVA 676

Query: 617 MKENGLKPDVVTYTTLMKALI 637
              NGL P+  TY  + + +I
Sbjct: 677 FSSNGLVPNYWTYRLMAENII 697



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 231/522 (44%), Gaps = 34/522 (6%)

Query: 87  LLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVP-------------APLWHSLL 133
           LL+ ++++    SA  + S  + +N   FK  +S +A                  + S++
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGF-FKEGDSDKAYSTYHEMLDRRISPDVVTYSSII 238

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR--- 190
             LC   + +D A  V++ + K+ +  +  + Y+ ++H    SE+  EA    ++ R   
Sbjct: 239 AALCKGQA-MDKAMEVLTTMVKNGVMPNC-MTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           + P  +TYN+L+    +N    +A  +   M + G   D   Y  ++Q       +    
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE-- 354

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           +  L   +  + I  D  + N +I  +AK     +AM      +  GL+P   TY AVI 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIG 414

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  SG   +A   FE++ + GL P    Y +L+           AE ++ EM   G+  
Sbjct: 415 ILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICL 474

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +   ++ +I ++   GR   +  +   M     KPN   YS ++ GY   G+     ++L
Sbjct: 475 NTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLL 534

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M S G++PD   YN +I+ + + + +  A+A F  M+S G+ P+ IT+N ++   F  
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            R   A+EL+  + + G     +TYNI+++ L +    ++  R+  N+    L     T+
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
             ++    + GR           +D+A + F    ++GL P+
Sbjct: 655 NIMIGALLKVGR-----------NDEAKDLFVAFSSNGLVPN 685



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 173/407 (42%), Gaps = 30/407 (7%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQ-GVG-LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           LN  +   A+   A+   R+  MA+ G G ++P   TY  +I     +GR     A    
Sbjct: 53  LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGN 112

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           + + G +     +  LLKG        DA + V+  M     +PD  + ++L+    +  
Sbjct: 113 VVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDEN 172

Query: 385 RWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           R + A  +L  M       + P+   Y+ ++ G+   G+  + +    EM    + PD  
Sbjct: 173 RSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVV 232

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+ +I    K   +  AM     M+  G+ P+ +T+N+++  +    +   A    ++M
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G  P   TYN +++ L +  R  + +++  +M  +GL P++ TY TL+  Y   G  
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 562 DDAIECLEGLS------------------------DQAVNAFRVMRTDGLKPSNLALNSL 597
            +    L+ +                         D+A+  F  MR  GL P+ +   ++
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           I    +     +A    + M + GL P+++ YT+L+ +L   DK+ K
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDK 459



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 215/487 (44%), Gaps = 64/487 (13%)

Query: 68  EEDDDDVLSLQKQRYD--------FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAE 119
           E+  + +  L+K R D        +  L+++L +N  S  A  +  S +    +E  +A 
Sbjct: 280 EQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK-RGLEPDIAT 338

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
                    + +LL+   +  + +++ +A++  + ++ +   + + ++ILI A  + EK+
Sbjct: 339 ---------YCTLLQGYATKGALVEM-HALLDLMVRNGIHPDHHV-FNILICAYAKQEKV 387

Query: 180 YEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            EA L+  + R   L P  +TY A+I    ++  ++ A+    +M  +G   + I Y+ +
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I SL   +K D +  ++L  E+    I L+    N +I    K G   ++ +   +   +
Sbjct: 448 IHSLCIFDKWDKA--EELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   TY+ +I     +G+  EA  +   +   G+KP    YN L+ GY ++  + DA
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM  SGV P+  TY++++    +  R  +A    KE+ V   K            
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA----KELYVGITK------------ 609

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                              SG + +   YN+++    K N    A+  F  +    ++ +
Sbjct: 610 -------------------SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 650

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLL 533
           T T+N +I    K GR D A++LF      G  P   TY +M  N++G Q   E++ +L 
Sbjct: 651 TRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLF 709

Query: 534 GNMRAQG 540
            +M   G
Sbjct: 710 FSMEDNG 716



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 158/389 (40%), Gaps = 71/389 (18%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV--VSEMERSG---VLPDEHT 372
           +A  VF+EL   G   R  +   L +    +     A  V   + M R+G   V P  HT
Sbjct: 33  DARHVFDELLRRG---RGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 373 YSLLIDAYANAGRW------------------------------------ESARIVLKEM 396
           Y +LI     AGR                                     ++  IVL+ M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM---KSSGVEPDTHFYNVMIDTFGKY 453
                 P+ F  + +L G  D    Q   ++L  M   +  G  PD   Y  +I+ F K 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A + +  ML   I PD +T++++I    K    D+A E+   M + G  P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +++     E+ ++    L  MR+ G+ P+VVTY +L+D   ++GR  +A +  + ++ 
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + +                            +M  +G+ P +   N LI A+ + ++  E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  V   M+++GL P+VVTY  ++  L +
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCK 418



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 14/282 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + YS LI     + K+ EA      + S   +   +TYN LI+   R   ++ AL L  +
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   + I Y++++Q L  T +  ++  ++LY  I     +L+    N ++ G  K 
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAA--KELYVGITKSGTQLELSTYNIILHGLCKN 629

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+R         L  +T T+  +I AL   GR  EA+ +F     +GL P    Y
Sbjct: 630 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 689

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             + +  +  G L++ + +   ME +G   D    + ++      G    A   L  ++ 
Sbjct: 690 RLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749

Query: 399 SH---AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            H       + ++  +L+G    G++Q   + L E   S +E
Sbjct: 750 KHFSLEASTASLFIDLLSG----GKYQEYHRFLPEKYKSFIE 787



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 13/145 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY I+I       R +     LGN+  +G     +T+T L+       R  DA++ 
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
           +           R M      P   +   L+    ++ R  EA  +L  M ++   G  P
Sbjct: 145 V----------LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DVV+YTT++    +     K +S+Y
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTY 219


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 238/521 (45%), Gaps = 18/521 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSW--LQKHNLCYSYELLYSILIHALGRSEKLY 180
           ++PAP    LL+ L  + +S  L  A   +  +    L  +  +L    +HAL  +  L 
Sbjct: 44  SLPAPPPARLLRRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPALSLL 103

Query: 181 EAFLLSQRQRLT-PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +    Q Q     ++YN  ++  +       A  ++S+M + G   D +  S  +  L+
Sbjct: 104 RSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLS 163

Query: 240 RTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           RT  +   ++L + L +    D + + G   N +I G+ K  D + A+  +      GLS
Sbjct: 164 RTGLVGEAAALAEMLVRGRGIDGLGVVGW--NALIDGYCKVQDMAAALAVVERMTTQGLS 221

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
                Y  ++     SG    A  V E +K  G++P    +  L+  Y KM  +++A  +
Sbjct: 222 LDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTL 281

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
              M RSGVLPD  T S L+D     GR+  A  + +EM+     PN   Y   +     
Sbjct: 282 YEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAK 341

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                 +  +L EM S GV  D   Y  ++D  GK   +  A       LS+ I P+ +T
Sbjct: 342 VQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVT 401

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  L+D H + G  D AE++  +M+E+   P   T++ ++N L ++         +  M+
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G+ PNVVTY TL+D +          +C +G  + A++ +R M  +G++ +N  ++SL
Sbjct: 462 DSGIAPNVVTYGTLIDGF---------FKC-QG-QEAALDVYRDMLHEGVEANNFIVDSL 510

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +N   ++    EA A+ + M E GL  D V Y TLM  L +
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 213/461 (46%), Gaps = 13/461 (2%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           + +Q   L  + YN L++    + D + A  +  +M+ DG     + ++ +I    +  +
Sbjct: 215 MTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKR 274

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I+ +    LY+ +    +  D   L+ ++ G  + G  S+A         +G++P   TY
Sbjct: 275 IEEAF--TLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTY 332

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
              I +L+   R  E+  +  E+   G+      Y  ++    K G +++A+ V+     
Sbjct: 333 CTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS 392

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + P+  TY++L+DA+  AG  + A  +L +ME     PN   +S IL G   RG   +
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
               +++MK SG+ P+   Y  +ID F K      A+  +  ML EG+E +    ++L++
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G  + AE LF++M ERG       Y  +++ L +        ++   +  + L P
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           + V Y   ++   + G+F +A   L           + MR  GL+P     N++I+A   
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFL-----------KEMRNTGLEPDQATYNTMISAQCR 621

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +   ++A  +L  MK + +KP+++TYTTL+  L+      K
Sbjct: 622 EGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK 662



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 219/442 (49%), Gaps = 19/442 (4%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           ++L++   +N ++E+A  L   M + G   D +NY+ ++  L +T  + ++L  K+ +E+
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL--KVGQEL 565

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               +  D  + N  I    + G  S+A  FL   +  GL P  ATY  +I+A    G T
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A  +  E+K S +KP    Y  L+ G ++ G ++ A+++++EM  +G  P   TY  +
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRV 685

Query: 377 IDAYANAGRWESARIVLKEMEV---SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + A + +    S  ++L+  E+   +    +  +Y+ ++      G  ++   VL EM  
Sbjct: 686 LQACSGS---RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLG 742

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ PDT  +N +I    K + L +A A + +ML +G+ P+  T+NTL+      GR   
Sbjct: 743 RGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGE 802

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +  EM++ G  P   TY+I++    ++    +  RL   M ++G +P   TY +L+ 
Sbjct: 803 ADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLIS 862

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + ++           G+ +QA   F  M+  G+  ++   + L+N + + +   E   +
Sbjct: 863 DFAKA-----------GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRIL 911

Query: 614 LQYMKENGLKPDVVTYTTLMKA 635
           L+ MKE G KP   T +++ +A
Sbjct: 912 LKDMKELGFKPSKGTISSMSRA 933



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 212/477 (44%), Gaps = 20/477 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI    + +++ EAF L +   R  + P  +T +AL+    R+    +A  L  +M 
Sbjct: 262 HTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMD 321

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + Y   I SL +  +++ SL   L  E+    + +D  +   V+    K G 
Sbjct: 322 KIGVAPNHVTYCTFIDSLAKVQRVNESL--GLLGEMVSRGVAMDLVMYTTVMDRLGKEGK 379

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L  A    ++P   TY  ++ A   +G    AE +  +++E  + P    +++
Sbjct: 380 IEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSS 439

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G VK G +  A   + +M+ SG+ P+  TY  LID +      E+A  V ++M    
Sbjct: 440 ILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEG 499

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N+FI   ++ G R  G  +    + K+M   G+  D   Y  ++D   K   +  A+
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                ++   + PD + +N  I+C  + G++  A+   +EM+  G  P   TYN MI+  
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-GLSDQAVNAF 579
             +       +LL  M+   + PN++TYTTLV            +  LE G+ ++A    
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLV------------VGLLEAGVVEKAKYLL 667

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             M + G  P+ L    ++ A    +       V + M   GL  D+  Y TL+  L
Sbjct: 668 NEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVL 724



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 8/432 (1%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---Q 189
           L N    N +I+ A A+   + +  L   + + Y+ L+  L ++  +  A  + Q    +
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDH-VNYATLMDGLFKTGNMPAALKVGQELMER 568

Query: 190 RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
            L+P  + YN  I+   R     +A + + +MR  G   D   Y+ +I +  R      +
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           L  KL  E++   I+ +      ++VG  +AG   KA   L      G +P   TY  V+
Sbjct: 629 L--KLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            A S S        V E +  +GL      YN L+      G  + A  V+ EM   G+ 
Sbjct: 687 QACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIA 746

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD  T++ LI  +  +   ++A     +M      PN   ++ +L G    G       V
Sbjct: 747 PDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 806

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           + EMK  G+EP+   Y++++  + K +    A+  +  M+S+G  P   T+N+LI    K
Sbjct: 807 ICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAK 866

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G  ++A+ELF EM+ RG    ++TY+I++N   +     +V+ LL +M+  G  P+  T
Sbjct: 867 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926

Query: 548 YTTLVDIYGQSG 559
            +++   + + G
Sbjct: 927 ISSMSRAFSKPG 938



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 34/314 (10%)

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP- 403
           +++ G L  A  VVS +      P       LI A A++G   +A         S  +P 
Sbjct: 29  FLRAGRLSAASHVVSSLPAP---PPARLLRRLIPALASSGLVAAA---------SRFRPV 76

Query: 404 --NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP----DTHFYNVMIDTFGKYNCLH 457
             +    + I+  Y      +    +L+   SSG +P    DT  YN+ +    +     
Sbjct: 77  PGDPLTLNSIILSYCSLHALRPALSLLRS--SSGPQPQVAADTVSYNIFLAGLSEQGHGR 134

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTT-YNI 515
            A      M   G+  D +T +T +    + G    A  L E + + RG        +N 
Sbjct: 135 LAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNA 194

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+   + +       ++  M  QGL  +VV Y TLV  +  SG  D A E  E      
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAE------ 248

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M+ DG++PS +   +LI  + + +R  EAF + + M  +G+ PDVVT + L+  
Sbjct: 249 -----RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDG 303

Query: 636 LIRVDKFHKVFSSY 649
           L R  +F + ++ +
Sbjct: 304 LCRDGRFSEAYALF 317


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 189/405 (46%), Gaps = 32/405 (7%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           ND + G  + GD  +A+R +    G+  S      AA+I  L  SGRT EA  V      
Sbjct: 63  NDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL----- 117

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +  +P   AYNA++ GY   G L  A  +V++M      PD +TY+ LI      GR  +
Sbjct: 118 AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGN 174

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A +VL +M      P+   Y+ +L     R  +++  ++L EM++ G  PD   YNV+++
Sbjct: 175 ALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVN 234

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   +  A+     + S G EP+T+++N ++       R++ AE+L  EM ++GY P
Sbjct: 235 GICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
              T+N++I+ L  +   E    +L  +   G  PN ++Y  ++  + +  + D A+   
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 567 ----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
                                 C  G  D AV     ++  G  P  ++ N++I+   + 
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  EA  +L  M   GL+PD++TY+T+   L R D+  +   ++
Sbjct: 415 GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF 459



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 195/410 (47%), Gaps = 16/410 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+ ++     T ++D++  ++L  ++    +E D    N +I G    G    A+ 
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAA--RRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   TY  ++ A        +A  + +E++  G  P    YN ++ G  
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G + DA   +  +   G  P+  +Y++++     A RWE A  ++ EM      PN  
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +++    RG  +   +VL ++   G  P++  YN ++  F K   +  AMA  + M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +S G  PD +++NTL+    + G  D A EL  +++++G  P   +YN +I+ L +  + 
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   LL  M  +GL P+++TY+T+      SG       C E   ++A+ AF  ++  G
Sbjct: 418 KEALELLNEMVTKGLQPDIITYSTI-----SSGL------CREDRIEEAIRAFCKVQDMG 466

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           ++P+ +  N+++    + +    A  +  YM  NG  P+  TYT L++ L
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 198/456 (43%), Gaps = 12/456 (2%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P P   +L+K LC+S  + +    + +       C    + Y+ ++     + +L  A
Sbjct: 92  AAPGP-CAALIKKLCASGRTAEARRVLAA-------CEPDVMAYNAMVAGYCVTGQLDAA 143

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
             L     + P   TYN LI           AL ++  M + G   D + Y++++++  +
Sbjct: 144 RRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCK 203

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            +    ++  KL  E+       D    N V+ G  + G    A+ FL      G  P T
Sbjct: 204 RSGYKQAM--KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT 261

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            +Y  V+  L  + R  +AE +  E+ + G  P    +N L+    + G ++ A  V+ +
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           + + G  P+  +Y+ ++ A+    + + A   ++ M      P+   Y+ +L      GE
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++L ++K  G  P    YN +ID   K      A+   + M+++G++PD IT++T
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +     +  R + A   F ++Q+ G  P T  YN ++  L ++    +   L   M + G
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            +PN  TYT L++     G   +A E L  L  + V
Sbjct: 502 CMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/507 (21%), Positives = 219/507 (43%), Gaps = 14/507 (2%)

Query: 45  TASGESSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALA 104
           T +   +F+ +   +  N        +D +  L + R D    L  +   S  E ++A  
Sbjct: 37  TPNSRLNFAHAGVAASPNAVPHRAVSNDRLRGLVR-RGDLEEALRLVESMSGLEPSAAPG 95

Query: 105 SSPSSLNRV--EFKLAESYRAVPAP-----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
              + + ++    + AE+ R + A       +++++   C +   +D A  +V+ +    
Sbjct: 96  PCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQ-LDAARRLVADMPMEP 154

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
             Y+Y  L   L    GR+           R+   P  +TY  L+ A  +    ++A+ L
Sbjct: 155 DSYTYNTLIRGLC-GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL 213

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           + +MR  G   D I Y++V+  + +  ++D ++  +  K +     E +    N V+ G 
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI--EFLKSLPSHGCEPNTVSYNIVLKGL 271

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
             A     A + +      G  P   T+  +I+ L   G    A  V +++ + G  P +
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            +YN +L  + K   +  A   V  M   G  PD  +Y+ L+ A    G  ++A  +L +
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           ++     P    Y+ ++ G    G+ +   ++L EM + G++PD   Y+ +     + + 
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDR 451

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+ AF ++   GI P+T+ +N ++    K      A +LF  M   G  P  +TY I
Sbjct: 452 IEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTI 511

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLL 542
           +I  L  +   ++ + LLG + ++G++
Sbjct: 512 LIEGLTYEGLVKEARELLGELCSRGVV 538


>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic-like [Brachypodium distachyon]
          Length = 858

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 187/375 (49%), Gaps = 16/375 (4%)

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           G+LL   I    K      A R        G        +A+I+A + SG   EA  V E
Sbjct: 198 GKLLTAAIGALGKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLE 257

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYA 381
            +K +GL+P T  YNA++    K G   D  F +    +M R  + PD  T++ L+ A +
Sbjct: 258 SMKGAGLRPTTVTYNAVIDACGKGGV--DLRFTLGYFRQMLRDRLCPDRKTFNSLLSACS 315

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AG  E AR +  EM       + + Y+  +      G  +   QVL +M++  V+P+  
Sbjct: 316 RAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVV 375

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+ +ID + K      A+  +++M S GI+ D + +NT++  + K G+Y     + +EM
Sbjct: 376 TYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEM 435

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ++ G    T TYN +IN  G+Q R + V  L+ +MR +G+ P+V+TY+TL+DIY ++G  
Sbjct: 436 EDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMH 495

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            DA            N +   +  GLKP  +  +S I+   ++     A ++L  M E G
Sbjct: 496 GDAF-----------NVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMG 544

Query: 622 LKPDVVTYTTLMKAL 636
           +KP+VVTY T++ A 
Sbjct: 545 IKPNVVTYNTIIDAF 559



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 65/442 (14%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           +I  +A++G  ++AM  L   +G GL P T TY AVI A    G  +      F ++   
Sbjct: 239 LISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQMLRD 298

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            L P  K +N+LL    + G+L+DA  +  EM   G+  D +TY+  IDA    G  E A
Sbjct: 299 RLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELA 358

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             VL +ME  + KPN   YS ++ GY    ++    ++ ++MKS G++ D   YN ++  
Sbjct: 359 MQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAI 418

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K           D M   GIE DT+T+N+LI+ + K GR D    L ++M+ RG  P 
Sbjct: 419 YVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPS 478

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY+ +I++  +     D   +  + +  GL P+VV +++ +D   ++G  + A+  L 
Sbjct: 479 VLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLN 538

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ------------------------ 605
            +++            G+KP+ +  N++I+AFG+ +                        
Sbjct: 539 DMTEM-----------GIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIR 587

Query: 606 -----------------RDAEAFAVL---QYMKENGLKPDVVTYTTLMKALIRVDKFH-- 643
                            R  E + +L   Q M + G++P+VVT++ ++ A  R + F   
Sbjct: 588 AANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDA 647

Query: 644 -------KVFSSYLFFNIYKML 658
                  ++F ++++   Y +L
Sbjct: 648 ALLLEQLRLFDNFVYGVAYGLL 669



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 193/426 (45%), Gaps = 29/426 (6%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARND-DLEKALNLMSKMR 220
           S LI A  RS  + EA  + +       R T +TYNA+I AC +   DL   L    +M 
Sbjct: 237 SALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDACGKGGVDLRFTLGYFRQML 296

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    D   ++ ++ + +R   ++ +  + L+ E+    I  D    N  I    K G+
Sbjct: 297 RDRLCPDRKTFNSLLSACSRAGHLEDA--RALFDEMIHLGIGRDIYTYNTFIDAICKCGN 354

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AM+ L   +   + P   TY+ +I   S   +  EA  ++E++K  G++     YN 
Sbjct: 355 IELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNT 414

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L  YVK G   +   V  EME SG+  D  TY+ LI+ Y   GR +    ++++M    
Sbjct: 415 VLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRG 474

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS ++  Y   G     F V  + K SG++PD   ++  IDT  K   +  A+
Sbjct: 475 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWAL 534

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
           +  + M   GI+P+ +T+NT+ID       + +++ L EE  E G       YN  I   
Sbjct: 535 SLLNDMTEMGIKPNVVTYNTIIDA------FGKSKVLSEEDPEAGEMGIVGVYNGQIIRA 588

Query: 518 -NLLGEQERWEDVK-----------RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
            N +       DV+            L   M  QG+ PNVVT++ +++   +   F+DA 
Sbjct: 589 ANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAA 648

Query: 566 ECLEGL 571
             LE L
Sbjct: 649 LLLEQL 654



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 190/432 (43%), Gaps = 52/432 (12%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           R RL P   T+N+L+SAC+R   LE A  L  +M   G   D   Y+  I ++ +   I+
Sbjct: 297 RDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIE 356

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             L  ++  ++E   ++ +    + +I G++K     +A++     + +G+      Y  
Sbjct: 357 --LAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNT 414

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           V+     +G+  E   V +E+++SG++  T  YN+L+ GY K G L    F+V +M R G
Sbjct: 415 VLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRG 474

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V P   TYS LID Y+ AG    A  V  + + S  KP+  ++S  +      G  +   
Sbjct: 475 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWAL 534

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGK-------------------YNC----------- 455
            +L +M   G++P+   YN +ID FGK                   YN            
Sbjct: 535 SLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEEDPEAGEMGIVGVYNGQIIRAANPVTR 594

Query: 456 --------------LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                         L+  +  F +M+ +G+ P+ +T++ +++   +C  ++ A  L E++
Sbjct: 595 GRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 654

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +    F     Y +   L+G QE W   + L   +       +   Y  L D+    G+ 
Sbjct: 655 RLFDNFVYGVAYGL---LMGYQEIWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQR 711

Query: 562 DDA-IECLEGLS 572
             A +  LEG++
Sbjct: 712 QGAQLVVLEGVN 723


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 233/529 (44%), Gaps = 54/529 (10%)

Query: 167 SILIHALGRSEKLYEA----FLLSQRQRLTPL-TYNALISA---CARNDD---------- 208
           S +IH L RS +L +A      + +R  ++ +   N+L+S    C  ND           
Sbjct: 107 SAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFV 166

Query: 209 ----LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
               L +A    + +R  GY       + +I SL R   ++  L  ++Y+EI    + ++
Sbjct: 167 QARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVE--LAWRIYQEISRSGVGVN 224

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
              LN ++    K G   K   FL   Q  G+ P   TY  +I+A S+ G   EA  +  
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANA 383
            +   G  P    YN ++ G  K G  + A+ V +EM RSG+ PD  TY SLL++A    
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
              E+  I   +M      P+   +S +++ +   G   +       +K +G+ PD   Y
Sbjct: 345 DAVETENI-FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 403

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR--YDRAEELFEEM 501
            ++I  + +   +  AM   + ML +G   D +T+NT++  H  C R     A++LF EM
Sbjct: 404 TILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL--HGLCKRKMLGEADKLFNEM 461

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ERG FP + T  I+I+   +    ++   L   M+ + +  +VVTY TL+D +G+ G  
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           D A E                        C +G   +A   +  M +  +KP+ +  NS+
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           I  +      ++    L+ M   G  PD ++Y TL+   ++ +   K F
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 214/478 (44%), Gaps = 28/478 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N +++A  ++  +EK    +S++++ G + D + Y+ +I + +    ++ +   +L  
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF--ELMH 284

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +            N VI G  K G   +A          GLSP + TY +++      G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +E E +F +++   + P    +++++  + + G L  A    + ++ +G++PD   Y+
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI  Y   G    A  +  EM       +   Y+ IL G   R       ++  EM   
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD++   ++ID   K   L +AM  F +M  + I+ D +T+NTL+D   K G  D A
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +E++ +M  +   P   +++I++N L  +    +  R+   M ++ + P V+   +++  
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584

Query: 555 YGQSGRFDDAIECLEGLSDQAV---------------------NAFRVMRT-----DGLK 588
           Y +SG   D    LE +  +                        AF +++       GL 
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P     NS+++ F  + +  EA AVL+ M E G+ PD  TYT+L+   +  D   + F
Sbjct: 645 PDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAF 702



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 207/468 (44%), Gaps = 22/468 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A      + EAF L      +  +P   TYN +I+   ++   E+A  + ++M 
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 221 QDGYHCDFINY-SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + G   D   Y SL++++  + + +++   + ++ ++    +  D    + ++  F ++G
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVET---ENIFSDMRSRDVVPDLVCFSSMMSLFTRSG 379

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +  KA+ +    +  GL P    Y  +I      G   EA  +  E+ + G       YN
Sbjct: 380 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYN 439

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +L G  K   L +A+ + +EM   G+ PD +T ++LID +   G  ++A  + K+M+  
Sbjct: 440 TILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEK 499

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             K +   Y+ +L G+   G+     ++  +M S  + P    ++++++       L  A
Sbjct: 500 RIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEA 559

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              +D M+S+ I+P  +  N++I  + + G     E   E+M   G+ P   +YN +I  
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619

Query: 520 LGEQERWEDVKRLLGNM--RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             ++E       L+  M  +  GL+P+V TY +++  +           C E    +A  
Sbjct: 620 FVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGF-----------CRENQMKEAEA 668

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             R M   G+ P      SLIN F       EAF     M + G  PD
Sbjct: 669 VLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 10/367 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F    S   VP  +  S + +L + + ++D A    + +++  L     ++Y+ILI    
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-NVIYTILIQGYC 411

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R   + EA      +L Q   +  +TYN ++    +   L +A  L ++M + G   D  
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
             +++I    +   + +++  +L+K+++  +I+LD    N ++ GF K GD   A     
Sbjct: 472 TLTILIDGHCKLGNLQNAM--ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWA 529

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                 + P   +++ ++ AL + G   EA  V++E+    +KP     N+++KGY + G
Sbjct: 530 DMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSG 589

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK--PNSFI 407
              D E  + +M   G +PD  +Y+ LI  +        A  ++K+ME       P+ F 
Sbjct: 590 NASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFT 649

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ IL G+    + +    VL++M   GV PD   Y  +I+ F   + L  A    D ML
Sbjct: 650 YNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEML 709

Query: 468 SEGIEPD 474
             G  PD
Sbjct: 710 QRGFSPD 716



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 65/361 (18%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESA 389
            K  + + +A++   V+ G L DA+  V  M  RSGV   E   SL +  Y+N G  +S 
Sbjct: 99  FKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSL-VSTYSNCGSNDSV 157

Query: 390 RIVL----------------------KEMEVSHAKPNSFIYSRILAGYRD---------- 417
             +L                      K   VS    N+ I S +  G+ +          
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217

Query: 418 --------------------RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                                G+ ++    L E++  GV PD   YN +I  +     + 
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A      M S+G  P   T+NT+I+   K G+Y+RA+E+F EM   G  P +TTY  ++
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 337

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
               ++    + + +  +MR++ ++P++V +++++ ++ +SG             D+A+ 
Sbjct: 338 MEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL-----------DKALM 386

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  ++  GL P N+    LI  +      +EA  +   M + G   DVVTY T++  L 
Sbjct: 387 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLC 446

Query: 638 R 638
           +
Sbjct: 447 K 447



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 46/213 (21%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           +SIL++AL     L EAF     ++S+  + T +  N++I    R+ +       + KM 
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI 602

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G+  D I+Y                                     N +I GF K  +
Sbjct: 603 SEGFVPDCISY-------------------------------------NTLIYGFVKEEN 625

Query: 281 ASKA---MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            SKA   ++ +   QG GL P   TY +++       +  EAEAV  ++ E G+ P    
Sbjct: 626 MSKAFGLVKKMEEKQG-GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           Y +L+ G+V    L +A     EM + G  PD+
Sbjct: 685 YTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 245/525 (46%), Gaps = 65/525 (12%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLY 180
           V A  +  LLK LC+   + D    V+  + + + C       +IL+  L    RS++  
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELS-CMPDVFSCTILLKGLCDENRSQEAL 178

Query: 181 EAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           E   +    R     P  ++Y  +I+   +  D +KA +   +M       D + YS +I
Sbjct: 179 ELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSII 238

Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            +L +   +D ++  L  + K    + +  +    N ++ G+  +    +A+ FL   + 
Sbjct: 239 AALCKGQAMDKAMEVLTTMVK----NGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRS 294

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G+ P   TY +++  L  +GR+ EA  +F+ + + GL+P    Y  LL+GY   G L +
Sbjct: 295 DGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE 354

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              ++  M R+G+ PD H +++LI AYA   + + A +V  +M                 
Sbjct: 355 MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM----------------- 397

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                             +  G+ P+   Y  +I    K   +  AM  F++M+ EG+ P
Sbjct: 398 ------------------RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 474 DTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           + I + +LI   C F   ++D+AEEL  EM +RG    T  +N +I+   ++ R  + ++
Sbjct: 440 NIIVYTSLIHSLCIFD--KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M   G+ PNV+TY+TL+D Y  +G+ D+A + L  +       F V    G+KP  
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM-------FSV----GMKPDC 546

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N+LIN +    R  +A A+ + M  +G+ P+++TY  +++ L
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 219/500 (43%), Gaps = 52/500 (10%)

Query: 190 RLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT---RTNKI 244
           ++TP   TY  LI  C R   L+     +  + + G+  + I ++ +++ L    RT+  
Sbjct: 82  KVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 245 DSSLLQKLYKEIEC---------------------DKIELDGQLLND------------- 270
              +L+++  E+ C                     + +EL   + +D             
Sbjct: 142 MDIVLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 271 -VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            VI GF K GD+ KA           +SP   TY+++I AL       +A  V   + ++
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    YN++L GY      K+A   + +M   GV PD  TY+ L+D     GR   A
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           R +   M     +P+   Y  +L GY  +G       +L  M  +G+ PD H +N++I  
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICA 380

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  AM  F +M   G+ P+ +T+  +I    K G  D A   FE+M + G  P 
Sbjct: 381 YAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPN 440

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Y  +I+ L   ++W+  + L+  M  +G+  N + + +++  +           C E
Sbjct: 441 IIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH-----------CKE 489

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G   ++   F +M   G+KP+ +  ++LI+ +    +  EA  +L  M   G+KPD VTY
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 630 TTLMKALIRVDKFHKVFSSY 649
            TL+    RV +     + +
Sbjct: 550 NTLINGYCRVSRMDDALALF 569



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 228/515 (44%), Gaps = 20/515 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + S++  LC   + +D A  V++ + K+ +  +  + Y+ ++H    SE+  EA    ++
Sbjct: 234 YSSIIAALCKGQA-MDKAMEVLTTMVKNGVMPNC-MTYNSILHGYCSSEQPKEAIGFLKK 291

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R   + P  +TYN+L+    +N    +A  +   M + G   D   Y  ++Q       
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L   +  + I  D  + N +I  +AK     +AM      +  GL+P   TY
Sbjct: 352 LVE--MHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            AVI  L  SG   +A   FE++ + GL P    Y +L+           AE ++ EM  
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+  +   ++ +I ++   GR   +  +   M     KPN   YS ++ GY   G+   
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M S G++PD   YN +I+ + + + +  A+A F  M+S G+ P+ IT+N ++ 
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             F   R   A+EL+  + + G     +TYNI+++ L +    ++  R+  N+    L  
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              T+  ++    + GR           +D+A + F  +  +GL P     + +     E
Sbjct: 650 ETRTFNIMIGALLKVGR-----------NDEAKDLFAALSANGLVPDVRTYSLMAENLIE 698

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                E   +   M+ENG   +     ++++ L++
Sbjct: 699 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQ 733



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 158/389 (40%), Gaps = 71/389 (18%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV--VSEMERSG---VLPDEHT 372
           +A  VFEEL   G   R  +   L +    +     A  V   + M R+G   V P  HT
Sbjct: 33  DARHVFEELLRRG---RGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 373 YSLLIDAYANAGRW------------------------------------ESARIVLKEM 396
           Y +LI     AGR                                     ++  IVL+ M
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM---KSSGVEPDTHFYNVMIDTFGKY 453
                 P+ F  + +L G  D    Q   ++L  M   +  G  PD   Y  +I+ F K 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A + +  ML   I PD +T++++I    K    D+A E+   M + G  P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +++     E+ ++    L  MR+ G+ P+VVTY +L+D   ++GR  +A +  + ++ 
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + +                            +M  +G+ P +   N LI A+ + ++  E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  V   M+++GL P+VVTY  ++  L +
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCK 418



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 144/302 (47%), Gaps = 11/302 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           ++ SL+ +LC  +   D A  ++  +    +C +  + ++ +IH+  +  ++ E+   F 
Sbjct: 443 VYTSLIHSLCIFDK-WDKAEELILEMLDRGICLN-TIFFNSIIHSHCKEGRVIESEKLFD 500

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           L  R  + P  +TY+ LI        +++A  L+S M   G   D + Y+ +I    R +
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVG-FAKAGDASKAMRFLGMAQGVGLSPKTA 301
           ++D +L   L+KE+    +  +    N ++ G F     A+    ++G+ +  G   + +
Sbjct: 561 RMDDAL--ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS-GTQLELS 617

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L  +  T EA  +F+ L  + L+  T+ +N ++   +K+G   +A+ + + +
Sbjct: 618 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 677

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +G++PD  TYSL+ +     G  E    +   ME +    NS + + I+     RG+ 
Sbjct: 678 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 737

Query: 422 QR 423
            R
Sbjct: 738 TR 739



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/216 (19%), Positives = 94/216 (43%), Gaps = 7/216 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   R  ++ +A  L +      ++P  +TYN ++           A  L   + 
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y++++  L + N  D +L  ++++ +    ++L+ +  N +I    K G 
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEAL--RMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P   TY+ +   L   G   E + +F  ++E+G    ++  N+
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +++  ++ G +  A   +S ++      +  T SLL
Sbjct: 727 IVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 203/417 (48%), Gaps = 14/417 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ S+V+    ++ ++  +  ++L  E+    ++++    N ++  + +  D  +    L
Sbjct: 144 LSASVVVDGYCKSGRVAHA--RQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEML 201

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
            + +  G+ P   TY  ++  LS +    + EAVFEE+K   L      Y++++  Y + 
Sbjct: 202 KVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRA 261

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G ++ A  V  E   +G+ P+EHTY  LI+ +   G+ E+A +++ +M+V     N  ++
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY  +    +  ++   M+  G+E D + YN +     + N +  A      M+ 
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G+ P+ +++ TLI  H   G    A  LF EM   G  P   TYN+M++   ++    +
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +R    M  +GL+P++ +Y  LV  +G          C+ G  D A+  F  M+  G K
Sbjct: 442 AERFKKEMEKKGLVPDIYSYAALV--HGH---------CVNGKVDVALRLFEEMKQRGSK 490

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           P+ +A  +LI+   ++ R  EAF +   M  +GL PD   Y+ L+ +L   DK   V
Sbjct: 491 PNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL-HTDKKQNV 546



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 33/368 (8%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           TA Y  +  A ++SG    A   FE    +  GL PR+   + L     + G+L  A  +
Sbjct: 72  TAFYDMLFRAYADSGAAARAAEAFELTVSRLGGLDPRSLTSSLLSL--RRAGHLDTAADL 129

Query: 358 VSEMERSGVLPDEHT---YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +   S   PD  T    S+++D Y  +GR   AR +L EM     K N+  Y+ +L  
Sbjct: 130 LKQAATS--CPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDA 187

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y    +  R  ++LK M++ G+EP    Y +++D       +    A F+ M S+ +  D
Sbjct: 188 YTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGD 247

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
              ++++I+ + + G   RA E+F+E    G  P   TY  +IN   +  + E  + L+ 
Sbjct: 248 VYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVT 307

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLS------------------- 572
           +M+ +G+  N + + T++D Y +    D A+E    +E +                    
Sbjct: 308 DMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRAN 367

Query: 573 --DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             D+A N  R+M   G++P++++  +LI+    +    EA  + + M  NG +P +VTY 
Sbjct: 368 RMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYN 427

Query: 631 TLMKALIR 638
            +M   I+
Sbjct: 428 VMMDGYIK 435



 Score = 42.4 bits (98), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 543 PNVVT---YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           P+ VT    + +VD Y +SGR   A + L+            M   G+K + L  NSL++
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDE-----------MPRHGVKVNALCYNSLLD 186

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           A+  ++ D     +L+ M+  G++P V TYT L+  L       KV
Sbjct: 187 AYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKV 232


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 244/504 (48%), Gaps = 21/504 (4%)

Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL--LSQRQR---LTPLTYNAL 199
           +++ +   L  H L ++  L+  IL + +        + L  L+Q Q     T L Y ++
Sbjct: 40  ISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESI 99

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I+A  ++  L+KAL   ++M   G       ++ ++ SL R+N  + + L   + E++ +
Sbjct: 100 INAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWL--FFNELK-E 156

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           +++ D      +I G  + G+  K+ + LG+ Q +GLSP    Y  +I     +G    A
Sbjct: 157 RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERA 216

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
              F+++ E GL      +  L+ G  K G  KD   +  +M+ +G+ P+ +TY+ L++ 
Sbjct: 217 RLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNE 276

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEWQRTFQVLKEMKSSGVEP 438
           Y   G+   A  +  EM     + N   Y+ ++ G  R+   W+   +++ +MK + V P
Sbjct: 277 YCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAE-KLVDQMKKAAVSP 335

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   YN +I  F     L  A +  D++ S G+ P  +T+N LI+ + K G +    +L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM+ RG  P   T  ++I+     +  E   ++  +M   GL+P+V  Y  L  I+G  
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVL--IHGL- 452

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C++G   ++   FR M    ++PS++  N++I+ + ++     A  +L+ M+
Sbjct: 453 --------CMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504

Query: 619 ENGLKPDVVTYTTLMKALIRVDKF 642
             GL P+V +Y++++  L +  K+
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDGKW 528



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 205/445 (46%), Gaps = 27/445 (6%)

Query: 165 LYSILIHALGRSEKLYEAFL----LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           +++ L+ +L RS    +A+L    L +R +    ++  +I  C  N +L+K+  L+  ++
Sbjct: 130 IFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQ 189

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND-----VIVGF 275
             G   + + Y+ +I    +   I+ +   +L+     DK+   G + N      +I G 
Sbjct: 190 DMGLSPNVVIYTTLIDGCCKNGDIERA---RLF----FDKMGEMGLVANQYTFTVLINGL 242

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K G            +  GL P   TY  ++      G+   A  +F+E++E G++   
Sbjct: 243 FKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANV 302

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ G  +   + +AE +V +M+++ V P+  TY+ LI  + + G  + A  +L +
Sbjct: 303 VTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQ 362

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           ++ +   P+   Y+ ++ GY   G W+    + +EM+  G+ P      V+ID + +   
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQE 422

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A   +  M   G+ PD   +  LI      G    + +LF  M E    P    YN 
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           MI+   +++      RLL  M A+GL+PNV +Y++++ +  + G++++A    E L D+ 
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA----EVLLDKM 538

Query: 576 VNAFRVMRTDGLKPSNLALNSLINA 600
           +          LKPS   LN +  A
Sbjct: 539 IEL-------QLKPSASILNMISKA 556



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 18/278 (6%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHA---KPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           Y  +I+A+  +   + A I   EM V      +PN  I++ +L        +++ +    
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEM-VDKGLVFRPN--IFNSLLGSLVRSNCFEKAWLFFN 152

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           E+K   V+ D + + +MI    +   L  +      +   G+ P+ + + TLID   K G
Sbjct: 153 ELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             +RA   F++M E G      T+ ++IN L ++   +D   L   M+  GL PN+ TY 
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++ Y           C EG   +A + F  MR  G++ + +  N+LI     ++R  E
Sbjct: 272 CLMNEY-----------CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWE 320

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           A  ++  MK+  + P+++TY TL+     V    K  S
Sbjct: 321 AEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 217/448 (48%), Gaps = 13/448 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YN L++       ++   ++ S+M   G   D + ++ ++++L R +++ +++L  + 
Sbjct: 55  VVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL--ML 112

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    +  D      ++ GF + G    A+R       +G S    T   +I      
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +A    ++    G +P    YN  + G  +  ++  A  V+  M + G  PD  TY
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++++     G+ E A+ +L +M      P+   ++ ++A        +    + +++  
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD + +N++I+   K    H A+  F+ M + G  PD +T+NTLID     G+  +
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L ++M+  G    T TYN +I+ L ++ R E+ + +   M  QG+  N +T+ TL+D
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              +  + DDA E    L +Q       M ++GL+P+N+  NS++  + +     +A  +
Sbjct: 413 GLCKDKKIDDAFE----LINQ-------MISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
           L+ M  NG + DVVTY TL+  L +  +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGR 489



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 229/505 (45%), Gaps = 33/505 (6%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSK 218
           Y  L ++L+   G   KL E+       R + P  +T+N L+ A  R   +  A+ ++ +
Sbjct: 57  YNHLLNVLVE--GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 114

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           M   G   D   ++ ++Q       I+++L ++    E+ C   ++    +N +I G+ K
Sbjct: 115 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVT---VNVLINGYCK 171

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A+ ++      G  P   TY   +  L  +     A  V + + + G  P    
Sbjct: 172 LGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFT 231

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++    K G L++A+ ++++M   G LPD  T++ LI A     R E A  + +++ 
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+ + ++ ++      G+     ++ +EMK+SG  PD   YN +ID       L 
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 351

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M S G    TIT+NT+ID   K  R + AEE+F++M  +G      T+N +I
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-------- 569
           + L + ++ +D   L+  M ++GL PN +TY +++  Y + G    A + LE        
Sbjct: 412 DGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFE 471

Query: 570 ----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                           G +  A+   R MR  G++P+  A N ++ +        +A ++
Sbjct: 472 VDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSL 531

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M E G  PD +TY  + + L R
Sbjct: 532 FREMAEVGEPPDALTYKIVFRGLCR 556



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 11/317 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++  T  YN LL   V+   +K  E V SEM   G+ PD  T++ L+ A   A +  +A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L+EM      P+   ++ ++ G+ + G  +   +V   M   G        NV+I+ 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A+    + +++G EPD IT+NT ++   +      A ++ + M + G+ P 
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYNI++N L +  + E+ K +L  M  +G LP++ T+ TL+           A  C  
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI-----------AALCTG 277

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              ++A++  R +   G+ P     N LINA  +      A  + + MK +G  PD VTY
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337

Query: 630 TTLMKALIRVDKFHKVF 646
            TL+  L  + K  K  
Sbjct: 338 NTLIDNLCSLGKLGKAL 354



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
           K++ C   E+ Y+ LI  L    KL +A  L +    T      +TYN +I    +   +
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A  +  +M   G   + I ++ +I  L +  KID +   +L  ++  + ++ +    N
Sbjct: 386 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF--ELINQMISEGLQPNNITYN 443

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  + K GD  KA   L      G      TY  +I  L  +GRT  A  V   ++  
Sbjct: 444 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 503

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           G++P  KAYN +L+   +   ++DA  +  EM   G  PD  TY ++       G
Sbjct: 504 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGG 558



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 12/124 (9%)

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
           +K L+  MR +G    +    + +D Y     FDDA+       D  +N  + +   G++
Sbjct: 1   MKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAV-------DLILNQLQPLF--GIQ 51

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
              +  N L+N   E  +     +V   M   G+KPDVVT+ TLMKAL R    H+V ++
Sbjct: 52  ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA---HQVRTA 108

Query: 649 YLFF 652
            L  
Sbjct: 109 VLML 112


>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
 gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
          Length = 718

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 191/375 (50%), Gaps = 12/375 (3%)

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           G+L + +I    + G    A      A   G       ++A+I+A   SG   EA  +F 
Sbjct: 77  GKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFY 136

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            +K+ GLKP    YNA++    K G   K    +  EM R+G+ PD  T++ L+   +  
Sbjct: 137 SMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKG 196

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G WE+AR +  EM       + F Y+ +L      G+    F+++ EM +  + P+   Y
Sbjct: 197 GLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTY 256

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + MID + K   L  A   F+ M   GI  D +++NTL+  + K GR++ A ++  EM+ 
Sbjct: 257 STMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMEN 316

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G      TYN ++   G+Q +++ V+++   M+A+ + PN++TY+TL+D+Y +      
Sbjct: 317 SGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKG----- 371

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                 GL  +A++ FR  +  GLK   +  ++LI+A  ++     A ++L  M + G++
Sbjct: 372 ------GLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIR 425

Query: 624 PDVVTYTTLMKALIR 638
           P+VVTY +++ A  R
Sbjct: 426 PNVVTYNSIIDAFGR 440



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 213/465 (45%), Gaps = 19/465 (4%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +A+IS   R   +E A  +      +GY      +S +I +  R+   + ++  K++  +
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAI--KIFYSM 138

Query: 257 ECDKIELDGQLLNDVIVGFAKAG-DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   ++ +    N VI    K G +  + +         G+ P   T+ +++   S  G 
Sbjct: 139 KDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGL 198

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              A ++  E+   G+      YN LL    K G L  A  ++SEM    +LP+  TYS 
Sbjct: 199 WEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYST 258

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +ID YA AGR + AR +  EM+      +   Y+ +L+ Y   G ++    V +EM++SG
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +  D   YN ++  +GK          F+ M +  + P+ +T++TLID + K G Y  A 
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++F E ++ G       Y+ +I+ L +    E    LL  M  +G+ PNVVTY +++D +
Sbjct: 379 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA---LNSLINAFGE--DQRDAEA 610
           G+    +  ++     S+  +++      +    S +A    N +I  FG+   ++  +A
Sbjct: 439 GRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQA 498

Query: 611 -----------FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                        V   M E  +KP+VVT++ ++ A  R + F +
Sbjct: 499 KNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNACSRCNSFEE 543



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 27/363 (7%)

Query: 303 YAAVITALSNSGRTIEAEAVFE--ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           Y  ++  L N G   +A   FE    +E     + K  +A++    ++G ++ A+ V   
Sbjct: 43  YVFLLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKA 102

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG- 419
               G     + +S +I AY  +G    A  +   M+    KPN   Y+ ++      G 
Sbjct: 103 ALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGV 162

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           E++R  ++  EM  +G++PD   +N ++    K      A +    M++ GI+ D  T+N
Sbjct: 163 EFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYN 222

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+D   K G+ D A E+  EM  +   P   TY+ MI+   +  R +D + L   M+  
Sbjct: 223 TLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFL 282

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----------------------- 576
           G+  + V+Y TL+ IY + GRF++A++    + +  +                       
Sbjct: 283 GISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVV 342

Query: 577 -NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M+   + P+ L  ++LI+ + +     EA  V +  K+ GLK DVV Y+ L+ A
Sbjct: 343 RKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDA 402

Query: 636 LIR 638
           L +
Sbjct: 403 LCK 405



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 174/377 (46%), Gaps = 26/377 (6%)

Query: 93  ENSNSESASALASSPSSLNRVE-----FK--LAESYR----AVPAPLWHSLLKNLCSSNS 141
           +N   + ASA+ S+   L +VE     FK  L E Y     A  A +        C  N 
Sbjct: 73  KNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYC--NE 130

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS----EKLYEAFLLSQRQRLTP--LT 195
           +I + Y++  +  K NL     + Y+ +I A G+     +++ E F    R  + P  +T
Sbjct: 131 AIKIFYSMKDYGLKPNL-----VTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRIT 185

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N+L++ C++    E A +L  +M   G   D   Y+ ++ ++ +  ++D +   ++  E
Sbjct: 186 FNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAF--EIMSE 243

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    I  +    + +I G+AKAG    A       + +G+S    +Y  +++  +  GR
Sbjct: 244 MPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGR 303

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V  E++ SG++     YNALL GY K         V  EM+   V P+  TYS 
Sbjct: 304 FEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYST 363

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID Y+  G +  A  V +E + +  K +  +YS ++      G  +    +L EM   G
Sbjct: 364 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEG 423

Query: 436 VEPDTHFYNVMIDTFGK 452
           + P+   YN +ID FG+
Sbjct: 424 IRPNVVTYNSIIDAFGR 440



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 171/413 (41%), Gaps = 40/413 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+ A  +   L+ A  +MS+M       + + YS +I    +  ++D +  + L+
Sbjct: 219 FTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA--RNLF 276

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++   I LD    N ++  +AK G   +AM      +  G+     TY A++      
Sbjct: 277 NEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQ 336

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +      VFEE+K   + P    Y+ L+  Y K G  ++A  V  E +++G+  D   Y
Sbjct: 337 YKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLY 396

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY----------RDRGEWQR 423
           S LIDA    G  ESA  +L EM     +PN   Y+ I+  +           D G  Q 
Sbjct: 397 SALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAG--QT 454

Query: 424 TFQVLKEMKSSGVEPDTHFY------NVMIDTFGKYNC-------------LHHAMAAFD 464
           +   +  + SS VE  T         N +I  FG+                +   +  F 
Sbjct: 455 SELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFH 514

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL-GEQ 523
           +M    I+P+ +T++ +++   +C  ++ A  L EE++    F     Y +   LL G +
Sbjct: 515 KMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELR---LFD-NQVYGVAHGLLMGYR 570

Query: 524 ER-WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-IECLEGLSDQ 574
           E  WE  + L   ++          Y  L D+    G+   A +  LEG   Q
Sbjct: 571 ENVWEQAQSLFDEVKLMDSSTASAFYNALTDMLWHFGQKRGAQLVVLEGKRRQ 623



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + +I    + G+ + A+ +F+     GY      ++ +I+  G      +  ++  +M+ 
Sbjct: 81  SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140

Query: 539 QGLLPNVVTYTTLVDIYGQSG-RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            GL PN+VTY  ++D  G+ G  F   +E            F  M  +G++P  +  NSL
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEI-----------FDEMLRNGMQPDRITFNSL 189

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +    +      A ++   M   G+  D+ TY TL+ A+ +  +    F
Sbjct: 190 LAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAF 238


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 199/442 (45%), Gaps = 16/442 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           +TYN L+ + ++    +K   L+ +M   G  C  + + Y++VI  L R   ++ +    
Sbjct: 232 VTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELV 291

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
               +            N +I G    G   K        +  G+ P   TY A+I  L 
Sbjct: 292 EEMRLSKKASSFT---YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLL 348

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG+   A+A F E++  GL P    YN+LL GY K G  K+A  +  ++ R+G+ P   
Sbjct: 349 QSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVL 408

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++LID Y   G  E AR + +EM      P+ + Y+ ++ G  +      T +   EM
Sbjct: 409 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM 468

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G+ PD   YN  I        +  +    + ++ EGI  DT+T+N LID   K G  
Sbjct: 469 LSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNL 528

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             AEEL  +M   G  P   TY  +I+   E+    + ++   +M + GL P+ VTYT +
Sbjct: 529 KDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVI 588

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y           C  G    A   FR M  +G++P+ +  N LI+A     R   A+
Sbjct: 589 IHAY-----------CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAY 637

Query: 612 AVLQYMKENGLKPDVVTYTTLM 633
                M E GL P+  TYT L+
Sbjct: 638 RHFYEMLERGLVPNKYTYTLLI 659



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 216/461 (46%), Gaps = 32/461 (6%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
           AR DD+     + ++M Q G     + Y+ ++ S ++  + D   +  L KE+E      
Sbjct: 210 ARWDDMSA---VHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDK--IDMLLKEMEARG--- 261

Query: 264 DGQLLNDVIVGFAKAGDASKA--MRFLGMAQGVGLSPKTA--TYAAVITALSNSGRTIEA 319
              L NDV      AG A K        + + + LS K +  TY  +IT L   G   + 
Sbjct: 262 SSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKV 321

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +  E++  G+ P    YNA++ G ++ G ++ A+    EM   G+LPD  TY+ L++ 
Sbjct: 322 DDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNG 381

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           Y  AG  + A ++  ++  +   P    Y+ ++ GY   G+ +   ++ +EM   G  PD
Sbjct: 382 YCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 441

Query: 440 THFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            + Y +++   G +N    AM    FD MLS+G+ PD   +NT I      G   ++ +L
Sbjct: 442 VYTYTILMK--GSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQL 499

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            E +   G    T TYNI+I+ L +    +D + L+  M + GL P+ +TYT L+  +  
Sbjct: 500 REVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAH-- 557

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C  G   +A   F  M +DGL PS +    +I+A+        A+   + M
Sbjct: 558 ---------CERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKM 608

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKML 658
            E G++P+ +TY  L+ AL R+ +    +  +     Y+ML
Sbjct: 609 LEEGVEPNEITYNVLIHALCRMGRTQLAYRHF-----YEML 644



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 171/369 (46%), Gaps = 31/369 (8%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+  L ++ R  +  AV  E+ + G++P    YN LL  + K G     
Sbjct: 191 GVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKI 250

Query: 355 EFVVSEMERSG--VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           + ++ EME  G   LP++ TY+++I   A  G  E A  +++EM +S  K +SF Y+ ++
Sbjct: 251 DMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-KASSFTYNPLI 309

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G   RG  ++   +  EM++ G+ P    YN MI    +   +  A A F  M + G+ 
Sbjct: 310 TGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLL 369

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+L++ + K G    A  LF +++  G  P   TYNI+I+        E+ +RL
Sbjct: 370 PDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRL 429

Query: 533 LGNMRAQGLLPNVVTYTTLV--------------------------DIYGQSGRFDDAIE 566
              M  QG LP+V TYT L+                          D +  + R     E
Sbjct: 430 KEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRI--CAE 487

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
              G   ++     V+  +G+    +  N LI+   +     +A  ++  M  NGL+PD 
Sbjct: 488 ITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDC 547

Query: 627 VTYTTLMKA 635
           +TYT L+ A
Sbjct: 548 ITYTCLIHA 556



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 5/368 (1%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLE 210
           L K    ++Y  L + L+ A G  +K+ +  L  + + + P  +TYNA+I    ++  +E
Sbjct: 296 LSKKASSFTYNPLITGLL-ARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIE 354

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A     +MR  G   D I Y+ ++    +      +LL  L+ ++    +       N 
Sbjct: 355 AAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALL--LFGDLRRAGLAPTVLTYNI 412

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G+ + GD  +A R        G  P   TY  ++    N          F+E+   G
Sbjct: 413 LIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKG 472

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L+P   AYN  +   + +G +  +  +   +   G+  D  TY++LID     G  + A 
Sbjct: 473 LRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAE 532

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            ++ +M  +  +P+   Y+ ++  + +RG  +   +   +M S G+ P    Y V+I  +
Sbjct: 533 ELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAY 592

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +   L+ A   F +ML EG+EP+ IT+N LI    + GR   A   F EM ERG  P  
Sbjct: 593 CRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNK 652

Query: 511 TTYNIMIN 518
            TY ++I+
Sbjct: 653 YTYTLLID 660



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 115/289 (39%), Gaps = 38/289 (13%)

Query: 164 LLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ L++   ++    EA LL    +R  L P  LTYN LI    R  DLE+A  L  +
Sbjct: 373 ITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 432

Query: 219 MRQDGYHCDFINYSLVIQ------SLTRTNKIDSSLLQK--------------------- 251
           M + G   D   Y+++++      SL  T +    +L K                     
Sbjct: 433 MVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGD 492

Query: 252 ------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
                 L + I  + I  D    N +I G  K G+   A   +      GL P   TY  
Sbjct: 493 ISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTC 552

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I A    G   EA   F ++   GL P    Y  ++  Y + G L  A     +M   G
Sbjct: 553 LIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEG 612

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           V P+E TY++LI A    GR + A     EM      PN + Y+ ++ G
Sbjct: 613 VEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 101/282 (35%), Gaps = 96/282 (34%)

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG------------------ 470
           KE K+    PDT              C    ++AF  M S G                  
Sbjct: 164 KECKARDATPDT--------------CSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDA 209

Query: 471 -----------------IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG--YFPCTT 511
                            IEP  +T+NTL+D   K GR D+ + L +EM+ RG    P   
Sbjct: 210 ARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDV 269

Query: 512 TYNIMINLLGEQERW----------------------------------EDVKRLLGNMR 537
           TYN++I  L  +                                     + V  L   M 
Sbjct: 270 TYNVVIAGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEME 329

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G++P VVTY  ++    QSG+ + A         QA   F  MR  GL P  +  NSL
Sbjct: 330 NEGIMPTVVTYNAMIHGLLQSGQIEAA---------QA--KFVEMRAMGLLPDVITYNSL 378

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +N + +     EA  +   ++  GL P V+TY  L+    R+
Sbjct: 379 LNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 420


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 221/449 (49%), Gaps = 11/449 (2%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +IS   R   +E AL++ ++ ++ G+  +   YS ++ +  R+ +   +L  K+++ ++ 
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREAL--KVFQAMKK 262

Query: 259 DKIELDGQLLNDVIVGFAKAG-DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              + +    N +I    K G D  KA+      Q  G+ P   T+ ++I   S      
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +++ VF E++  G++     YN L+    K G ++ A  ++S M    + P+  TYS +I
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D Y   G +E A  +  +M+ S  +P+   Y+ ++  Y   G +       K+M+  G++
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D   YN +ID +GK      A   FD+M +EG+ P+ +T++ LID + K G +  A  +
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F E +  G  P    Y+ +I+   +    ED   LL  M   G+ PN+VTY +L+D YG+
Sbjct: 503 FVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 562

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA--EAFAVLQ 615
           +G+ D+ +E  +G  +  +N F  +   G + + +   +L +    +       A +V  
Sbjct: 563 NGQVDN-VEAAKG--NMPINVFNKV---GDRSTEIICKTLTSQQNANDHTGVLAAVSVFH 616

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            M++ GLKP+VVT++ ++ A  R     +
Sbjct: 617 EMQQFGLKPNVVTFSAILNACSRCSSLQE 645



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 14/346 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESG-LKPR-TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           L N G    A   +E + + G L+   +K  + ++    ++G ++ A  V +  +++G  
Sbjct: 172 LGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFG 231

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG-EWQRTFQ 426
            + + YS ++ AY  +GR   A  V + M+ +  KPN   Y+ I+      G + ++   
Sbjct: 232 NNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALD 291

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + +EM+  GVEPD   +N +I    + +    +   F  M   GIE D  T+NTLID   
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVC 351

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+ + A  +   M+ +   P   TY+ MI+  G+   +E+   L  +M+  G+ P+ V
Sbjct: 352 KGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRV 411

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +Y TL+DIY + GRFDDA+            A + M   GLK   +  N+LI+A+G+  +
Sbjct: 412 SYNTLIDIYAKLGRFDDAL-----------TACKDMERVGLKADVVTYNALIDAYGKQGK 460

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
             +A  +   MK  GL P+V+TY+ L+ A  +        S ++ F
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 195/431 (45%), Gaps = 64/431 (14%)

Query: 159 CYSYELLYSILIHALGRS----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKA 212
           C    + Y+ +I A G+     +K  + F   Q++ + P  +T+N+LI+ C+R    E +
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDS 324

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
             + ++M++ G   D   Y+ +I ++ +                   ++EL   +++   
Sbjct: 325 QRVFAEMQRRGIEQDIFTYNTLIDAVCKGG-----------------QMELAASIMS--- 364

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
                      +MR         +SP   TY+ +I      G   EA  ++ ++KESG++
Sbjct: 365 -----------SMRL------KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   +YN L+  Y K+G   DA     +MER G+  D  TY+ LIDAY   G+++ A  +
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGL 467

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             +M+     PN   YS ++  Y   G  Q    +  E K +G++PD   Y+ +ID+  K
Sbjct: 468 FDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCK 527

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE--------ELFEEMQER 504
              +  A+     M   GI+P+ +T+N+LID + + G+ D  E         +F ++ +R
Sbjct: 528 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDR 587

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLG------NMRAQGLLPNVVTYTTLVDIYGQS 558
                  +  I+   L  Q+   D   +L        M+  GL PNVVT++ +++   + 
Sbjct: 588 -------STEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRC 640

Query: 559 GRFDDAIECLE 569
               +A   LE
Sbjct: 641 SSLQEASVLLE 651


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 217/452 (48%), Gaps = 17/452 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN-YSLVIQSLTRTNKIDSSLLQ 250
           TPL Y+ +++A   +   ++AL  +  M  +G H    N ++ ++  L R+N  D +   
Sbjct: 89  TPL-YDTIVNAYVHSHSTDQALTFLHHMIHEG-HVPLSNTFNNLMCLLIRSNYFDKAWW- 145

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            ++ E++  K+ LD      +I G  +AG   K  R L M +  GLSP    Y  +I   
Sbjct: 146 -IFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G  + A+ +F ++   GL P    Y+ L+ G+ K G  ++   +   M+RSG++P+ 
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           + Y+ LI  Y N G  + A  V  EM           Y+ ++ G     ++    +++ +
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +   G+ P+   YN++I+ F     +  A+  F+++ S G+ P  +T+NTLI  + K   
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A +L +EM+ER   P   TY I+I+        E    +   M   GL+P+V TY+ 
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L  I+G          C+ G   +A   F+ +    L+P+++  N++I+ + ++     A
Sbjct: 444 L--IHGL---------CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +L  M  +G+ P+V ++ + +  L R +K+
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTIGLLCRDEKW 524



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 167/368 (45%), Gaps = 4/368 (1%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           L+P  + Y  LI  C +  ++  A NL  KM + G   +   YS+++    +        
Sbjct: 189 LSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGF 248

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             ++Y+ ++   I  +    N +I  +   G   KA +     +  G++    TY  +I 
Sbjct: 249 --QMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG 306

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L    +  EA  +  ++ + GL P    YN L+ G+  +G +  A  + ++++ SG+ P
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
              TY+ LI  Y+       A  ++KEME     P+   Y+ ++  +      ++  ++ 
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMH 426

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M+ SG+ PD + Y+V+I     +  +  A   F  +    ++P+++ +NT+I  + K 
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G   RA  L  EM   G  P   ++   I LL   E+W++ + LLG M   GL P+V  Y
Sbjct: 487 GSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546

Query: 549 TTLVDIYG 556
             +  + G
Sbjct: 547 KMVHKVKG 554



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 15/211 (7%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  Y+ +++ +   +    A+     M+ EG  P + T+N L+    +   +D+A  +F 
Sbjct: 89  TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFN 148

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           E++ +       ++ IMI    E   +    RLL  +   GL PNVV YTTL+D      
Sbjct: 149 ELKSKVVLD-AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC---- 203

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C  G    A N F  M   GL P+    + L+N F +     E F + + MK 
Sbjct: 204 -------CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256

Query: 620 NGLKPDVVTYTTLMKALIR---VDKFHKVFS 647
           +G+ P+   Y  L+        VDK  KVF+
Sbjct: 257 SGIVPNAYAYNCLISEYCNGGMVDKAFKVFA 287


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 228/525 (43%), Gaps = 54/525 (10%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ------RLTPLTYNALISACARNDD 208
           KH  C      + ILI +  + E   EA  +          +L   TYN L++     + 
Sbjct: 132 KHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNK 191

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+    + S+M   G   D   ++++I++L R ++I  ++L  + +E+    +  D +  
Sbjct: 192 LKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAIL--MMEEMGSYGLSPDEKTF 249

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             ++ GF + G+ + A+R        G      T   ++      GR  E  +  +E+  
Sbjct: 250 TTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSN 309

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P    +N+L+ G  ++G++K A  ++  M + G  PD  TY+ LI      G  E 
Sbjct: 310 EGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEE 369

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +M +    PN+  Y+ +++      + +   ++ + + S G+ PD   +N +I 
Sbjct: 370 AVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                N    AM  F+ M ++G  PD  T+N LID     GR + A  L +EM+  G   
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN +I+   + +R E+ + +   M  QG+  NVVTY TL+D   ++ R ++A +  
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQ-- 547

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             L DQ       M  +GLKP     NSL+  F       +A  ++Q M  NG +PD VT
Sbjct: 548 --LMDQ-------MLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVT 598

Query: 629 YTTLM-----------------------------------KALIR 638
           Y TL+                                   KAL R
Sbjct: 599 YGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFR 643



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 261/593 (44%), Gaps = 50/593 (8%)

Query: 84  FTPLLNFLS-----ENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCS 138
           F+ L++F S     + + S S S L+ SP++      +L +++   P  L  +L +    
Sbjct: 34  FSKLISFTSTHHHDQQAVSPSFSTLSPSPTT------QLPQNF--TPKQLRDALRRQ-SD 84

Query: 139 SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL---- 194
            +S +DL    + W  K        ++Y  ++  LG+         + Q  + T      
Sbjct: 85  EDSILDL----LDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRR 140

Query: 195 -TYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            T+  LI + A+ +  ++A+ ++  M ++ G   D   Y+ ++  L   NK+   L++ +
Sbjct: 141 GTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKL--KLVEIV 198

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
              +    I+ D    N +I    +A     A+  +      GLSP   T+  ++     
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIE 258

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G    A  + E++  +G        N L+ GY K G +++    + EM   G  PD  T
Sbjct: 259 EGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT 318

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ L++     G  + A  +L  M      P+ F Y+ ++ G    GE +   ++L +M 
Sbjct: 319 FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
                P+T  YN +I T  K N +  A      + S+GI PD  T+N+LI        + 
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ELFEEM+ +G  P   TYN++I+ L  + R E+   LL  M + G   NVVTY TL+
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498

Query: 553 DIYGQSGRFDDAIEC-----LEGLS-------------------DQAVNAFRVMRTDGLK 588
           D + ++ R ++A E      L+G+S                   ++A      M  +GLK
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           P     NSL+  F       +A  ++Q M  NG +PD VTY TL+  L +  +
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGR 611



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 196/444 (44%), Gaps = 14/444 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N L+    +   +E+ L+ + +M  +G+  D   ++ ++  L R   +  +L  ++ 
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL--EIL 339

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +  +  + D    N +I G  K G+  +A+  L        SP T TY  +I+ L   
Sbjct: 340 DVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKE 399

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA  +   L   G+ P    +N+L++G       + A  +  EM+  G  PDE TY
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTY 459

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LID+  + GR E A  +LKEME S    N   Y+ ++ G+      +   ++  EM+ 
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL 519

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+  +   YN +ID   K   +  A    D+ML EG++PD  T+N+L+    + G   +
Sbjct: 520 QGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKK 579

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++ + M   G  P + TY  +I  L +  R E   RLL  ++ +G++    TY  ++ 
Sbjct: 580 AADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIK 639

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD-AEAFA 612
              +  R           + +AV  FR M   G  P  +    +            EA  
Sbjct: 640 ALFREKR-----------TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVD 688

Query: 613 VLQYMKENGLKPDVVTYTTLMKAL 636
            L  M + G  PD  ++  L + L
Sbjct: 689 FLVEMTDKGFLPDFSSFLMLAEGL 712



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 12/379 (3%)

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           +V+    K G      R L   +  G   +  T+  +I + +      EA AV + ++E 
Sbjct: 110 EVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEE 169

Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GLK     YN LL   V    LK  E V S M   G+ PD  T+++LI A   A +   
Sbjct: 170 FGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRP 229

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++++EM      P+   ++ ++ G+ + G      ++ ++M ++G        NV++ 
Sbjct: 230 AILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVH 289

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + K   +   ++  D M +EG  PD  T+N+L++   + G    A E+ + M + G+ P
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN +I  L +    E+   +L  M  +   PN VTY TL+              C 
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL-----------CK 398

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E   ++A    RV+ + G+ P     NSLI           A  + + MK  G  PD  T
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFT 458

Query: 629 YTTLMKALIRVDKFHKVFS 647
           Y  L+ +L    +  +  S
Sbjct: 459 YNMLIDSLCSRGRLEEALS 477


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 201/414 (48%), Gaps = 14/414 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S+V+    ++ ++  +  ++L  E+    ++++    N ++  + +  D  +    L + 
Sbjct: 71  SVVVDGYCKSGRVAHA--RQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 128

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+ P   TY  ++  LS +    + EAVFEE+K   L      Y++++  Y + G +
Sbjct: 129 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 188

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  V  E   +G+ P+EHTY  LI+ +   G+ E+A +++ +M+V     N  +++ +
Sbjct: 189 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTM 248

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  +    +  ++   M+  G+E D + YN +     + N +  A      M+ +G+
Sbjct: 249 IDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV 308

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ +++ TLI  H   G    A  LF EM   G  P   TYN+M++   ++    + +R
Sbjct: 309 RPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAER 368

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M  +GL+P++ +Y  LV  +G          C+ G  D A+  F  M+  G KP+ 
Sbjct: 369 FKNEMEKKGLVPDIYSYAALV--HGH---------CVNGKVDVALRLFEEMKQRGSKPNL 417

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +A  +LI+   ++ R  EAF +   M  +GL PD   Y+ L+ +L   DK   V
Sbjct: 418 VAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL-HTDKKQNV 470



 Score = 42.4 bits (98), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 543 PNVVT---YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           P+ VT    + +VD Y +SGR   A + L+            M   G+K + L  NSL++
Sbjct: 62  PDSVTPLSASVVVDGYCKSGRVAHARQLLD-----------EMPRHGVKVNALCYNSLLD 110

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           A+  ++ D     +L+ M+  G++P V TYT L+  L       KV
Sbjct: 111 AYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKV 156


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 40/492 (8%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R  L   ++N LI        L  +L+   K+ + G+  D + ++ ++  L   ++I  
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194

Query: 247 SL--------LQKLYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           +L           L+ ++   +I L   ++  N +I G    G   +A   +    G GL
Sbjct: 195 ALALFGYMVETGSLFDQMV--EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 252

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
                TY  ++  +   G T  A  +  +++E+ +KP    Y+A++    K G+  DA++
Sbjct: 253 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 312

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + SEM   G+ P+  TY+ +ID + + GRW  A+ +L++M      P+   ++ +++   
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+     ++  EM    + PDT  YN MI  F K+N    A   FD M S    PD +
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 428

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+NT+ID + +  R D   +L  E+  RG    TTTYN +I+   E +     + L   M
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------ 572
            + G+ P+ +T   L+  + ++ + ++A+E  E +                         
Sbjct: 489 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+A + F  +   G++P     N +I+ F      ++A  +   MK+NG +PD  TY TL
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 608

Query: 633 MKALIRVDKFHK 644
           ++  ++  +  K
Sbjct: 609 IRGCLKAGEIDK 620



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 210/457 (45%), Gaps = 43/457 (9%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ + VI    R N+ D ++   LY+++E  +I L+    N +I  F      S ++   
Sbjct: 107 VDCNKVIGVFVRMNRPDVAI--SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164

Query: 289 GMAQGVGLSPKTATYAAVI----------TALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    +G  P   T+  ++           AL+  G  +E  ++F+++ E GL P    +
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITF 224

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G    G + +A  +V++M   G+  D  TY  +++     G  +SA  +L +ME 
Sbjct: 225 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +H KP+  IYS I+      G       +  EM   G+ P+   YN MID F  +     
Sbjct: 285 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M+   I PD +T+N LI    K G+   AE+L +EM  R  FP T TYN MI 
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 404

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R++D K +   M +    P+VVT+ T++D+Y ++ R D+ ++ L  +S + + A
Sbjct: 405 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 460

Query: 579 ------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                                   F+ M + G+ P  +  N L+  F E+++  EA  + 
Sbjct: 461 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 520

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           + ++ + +  D V Y  ++  +    +VD+   +F S
Sbjct: 521 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 557



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 248/547 (45%), Gaps = 39/547 (7%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R +P  ++  + L+K  C  +    L++++ ++ +   L +  +++ ++ L+H L   ++
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 179 LYEAF-----------LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           + EA            L  Q     LTP  +T+N LI+       + +A  L++KM   G
Sbjct: 192 ISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 251

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
            H D + Y  ++  + +     S+L   L  ++E   I+ D  + + +I    K G  S 
Sbjct: 252 LHIDVVTYGTIVNGMCKMGDTKSAL--NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 309

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A          G++P   TY  +I    + GR  +A+ +  ++ E  + P    +NAL+ 
Sbjct: 310 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 369

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
             VK G L +AE +  EM    + PD  TY+ +I  +    R++ A+ +   M    A P
Sbjct: 370 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASP 425

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   ++ I+  Y          Q+L+E+   G+  +T  YN +I  F + + L+ A   F
Sbjct: 426 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 485

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+S G+ PDTIT N L+    +  + + A ELFE +Q       T  YNI+I+ + + 
Sbjct: 486 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 545

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            + ++   L  ++   G+ P+V TY  +  I G  G+          +SD  V  F  M+
Sbjct: 546 SKVDEAWDLFCSLPIHGVEPDVQTYNVM--ISGFCGK--------SAISDANV-LFHKMK 594

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            +G +P N   N+LI    +     ++  ++  M+ NG   D  T   ++  LI   +  
Sbjct: 595 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-IKMVADLITDGRLD 653

Query: 644 KVFSSYL 650
           K FS  L
Sbjct: 654 KSFSDML 660


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 218/452 (48%), Gaps = 17/452 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN-YSLVIQSLTRTNKIDSSLLQ 250
           TPL Y+ +++A   +   ++AL  +  M  +G H    N ++ ++  L R+N  D +   
Sbjct: 89  TPL-YDTVVNAYVHSHSTDQALTFLHHMIHEG-HVPLSNTFNNLLCLLIRSNYFDKAWW- 145

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            ++ E++  K+ LD      +I G  +AG   K  R L M +  GLSP    Y  +I   
Sbjct: 146 -IFNELK-SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G  + A+ +F ++   GL P    Y+ L+ G+ K G  ++   +   M+RSG++P+ 
Sbjct: 204 CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           + Y+ LI  Y N G  + A  V  EM           Y+ ++ G     ++    +++ +
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +   G+ P+   YN++I+ F     +  A+  F+++ S G+ P  +T+NTLI  + K   
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A +L +EM+ER   P   TY I+I+        E    +   M   GL+P+V TY+ 
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L  ++G          C+ G   +A   F+ +    L+P+++  N++I+ + ++     A
Sbjct: 444 L--LHGL---------CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +L  M ++G+ P+V ++ + +  L R +K+
Sbjct: 493 LRLLNEMVQSGMVPNVASFCSTIGLLCRDEKW 524



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 12/363 (3%)

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           S  M  L  A     S  T  Y  V+ A  +S  T +A      +   G  P +  +N L
Sbjct: 71  SSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNL 130

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L   ++  Y   A ++ +E+ +S V+ D +++ ++I     AG +     +L  +E    
Sbjct: 131 LCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGL 189

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN  IY+ ++ G    G       +  +M   G+ P+ H Y+V+++ F K         
Sbjct: 190 SPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            ++ M   GI P+   +N LI  +   G  D+A ++F EM+E+G      TYNI+I  L 
Sbjct: 250 MYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
             +++ +  +L+  +   GL PN+VTY  L++ +    + D A           V  F  
Sbjct: 310 RGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSA-----------VRLFNQ 358

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +++ GL P+ +  N+LI  + + +  A A  +++ M+E  + P  VTYT L+ A  R++ 
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418

Query: 642 FHK 644
             K
Sbjct: 419 TEK 421



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 183/445 (41%), Gaps = 78/445 (17%)

Query: 117 LAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           + E +   P  + ++ L + C  + ++ LA  +   + +  L  +    YS+L++   + 
Sbjct: 183 MLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHT-YSVLMNGFFKQ 241

Query: 177 EKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
               E F +    +R  + P    YN LIS    +  ++KA  + ++MR+ G  C  + Y
Sbjct: 242 GLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTY 301

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I  L R  K                                       +A++ +   
Sbjct: 302 NILIGGLCRGKKF-------------------------------------GEAVKLVHKV 324

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
             VGLSP   TY  +I    +  +   A  +F +LK SGL P    YN L+ GY K+  L
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  +V EME   + P + TY++LIDA+A     E A  +   ME S   P+ + YS +
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVL 444

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           L G    G  +   ++ K +    ++P++  YN MI  + K    + A+   + M+  G+
Sbjct: 445 LHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGM 504

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+  ++                              C+T     I LL   E+W++ + 
Sbjct: 505 VPNVASF------------------------------CST-----IGLLCRDEKWKEAEL 529

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYG 556
           LLG M   GL P+V  Y  +  + G
Sbjct: 530 LLGQMINSGLKPSVSLYKMVHKVKG 554



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  Y+ +++ +   +    A+     M+ EG  P + T+N L+    +   +D+A  +F 
Sbjct: 89  TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           E++ +       ++ IMI    E   +    RLL  +   GL PNVV YTTL+D      
Sbjct: 149 ELKSKVVLD-AYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC---- 203

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C +G    A N F  M   GL P+    + L+N F +     E F + + MK 
Sbjct: 204 -------CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256

Query: 620 NGLKPDVVTYTTLMKALIR---VDKFHKVFS 647
           +G+ P+   Y  L+        VDK  KVF+
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFA 287


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 207/446 (46%), Gaps = 13/446 (2%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L   T N +++A  ++   E  +  +S M   G   D + Y+ +I +  R   ++ +   
Sbjct: 255 LNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF-- 312

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L        +E      N ++ G  K G   +A   L     +GL+P  ATY  ++  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
                 +EA+ +F+E+   G+ P   ++++L+    + G+L  A     EMERSG++PD 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y++LID +   G    A  +  EM       +   Y+  L G   +  +     +  E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+ PD + +  +I  + K   +  A+  F+ M+   ++PD +T+NTLID   K G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             RA+EL+++M  +   P   +Y  ++N         +   L   M  +G+ PN+VT  T
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  Y +SG    A E L             M ++G+ P + + N+LI+ + ++    +A
Sbjct: 613 LIKGYCRSGDMPKAYEYLSK-----------MISNGIIPDSFSYNTLIDGYLKEANLEKA 661

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKAL 636
           F ++  M++ GL+ +++TY  ++   
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGF 687



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 202/477 (42%), Gaps = 26/477 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L Y+ L+    +   L +       +R+ G        + ++  L RT  +D  L  ++Y
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD--LAWEIY 245

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    IEL+   LN ++    K       M FL   +G G+     TY  +I A    
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  +       G++P    YNA+L G  K+G    A+ V+ EM + G+ P+  TY
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+           A+ +  EM      P+   +S ++      G   +     +EM+ 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG+ PD   Y ++ID F +   L  A+   D ML+ G   D +T+NT ++   K   +  
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ LF EM ERG  P   T+  +I    +    +    L   M    L P+ VTY TL+D
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 554 IY---GQSGR----FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKP 589
            +   G+ GR    +DD I                  C  GL  +A+N    M   G++P
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +  N+LI  +       +A+  L  M  NG+ PD  +Y TL+   ++     K F
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 208/465 (44%), Gaps = 18/465 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  R   + EAF L     S+      LTYNA++    +    ++A +++ +M 
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   +   Y+ ++  + R + I  +  Q+++ E+    +  D    + +I   A+ G 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEA--QEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+      +  G+ P    Y  +I     +G   +A  + +E+   G       YN 
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L G  K     DA+ + +EM   G++PD +T++ LI  Y   G  + A  + + M  ++
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+   Y+ ++ G+   GE  R  ++  +M    + PD   Y  +++ F     L  A+
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D+ML +GI P+ +T NTLI  + + G   +A E   +M   G  P + +YN +I+  
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++   E    L+  M  +GL  N++TY  +++ +           C EG   +A    R
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGF-----------CAEGKMQEAEQVLR 701

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            M   G+ P     +SLIN         EAF     M + GL PD
Sbjct: 702 KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 7/395 (1%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L Y+ +++ L   G+ ++  +  +   +  LTP   TYN L+    R D++ +A  +  +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   D +++S +I  L R   +  +L+   ++E+E   I  D  +   +I GF + 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMH--FREMERSGIVPDNVIYTILIDGFCRN 445

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A++        G      TY   +  L       +A+ +F E+ E G+ P    +
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L++GY K G +  A  +   M R+ + PD+ TY+ LID +  AG    A+ +  +M  
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y  +L G+   G       +  +M   G+ P+    N +I  + +   +  
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A     +M+S GI PD+ ++NTLID + K    ++A  L  EM++RG      TYN+++N
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILN 685

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
               + + ++ +++L  M   G+ P+  TY++L++
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 14/340 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F+ L+  G+     A N LL G V+ G++  A  +  E+ R G+  + +T ++++
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMV 264

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     ++E+    L +ME      +   Y+ ++  Y   G  +  FQ+L    S G+E
Sbjct: 265 NALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME 324

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    YN ++    K      A      ML  G+ P+  T+NTL+    +      A+E+
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F+EM  RG  P   +++ +I +L               M   G++P+ V YT L+D + +
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +G   DA++    + D+       M   G     +  N+ +N   + +  A+A  +   M
Sbjct: 445 NGALSDALK----MRDE-------MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 618 KENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYLFFNI 654
            E G+ PD  T+TTL++   +   +DK   +F + +  N+
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 153/335 (45%), Gaps = 8/335 (2%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           + F+  E    VP  + +++L +    N ++  A  +   +     C+   + Y+  ++ 
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNG 476

Query: 173 LGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L + +   +A +L      + + P   T+  LI    ++ +++KALNL   M +     D
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + Y+ +I    +  ++  +  ++L+ ++    I  D      V+ GF  +G   +A+  
Sbjct: 537 KVTYNTLIDGFCKAGEMGRA--KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                  G+ P   T   +I     SG   +A     ++  +G+ P + +YN L+ GY+K
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L+ A  +++EME+ G+  +  TY+L+++ +   G+ + A  VL++M      P+   
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           YS ++ G+  +   +  F+   EM   G+ PD  F
Sbjct: 715 YSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749


>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
 gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
          Length = 646

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/550 (25%), Positives = 235/550 (42%), Gaps = 72/550 (13%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR------LTPLTYNALISACARNDDLEKALNLM 216
           EL+Y   + ALGR  K  +A  + +  R      L  +   +++S    ++ L  AL L 
Sbjct: 4   ELVY--FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELF 61

Query: 217 SKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
             ++QD  Y  D   Y+ +I  L+R  + D  +   L++ ++ +    +    N ++  +
Sbjct: 62  ESLKQDESYSLDVYAYTSLISILSRARRFDEGI--TLFETMQREGQRGNAVTYNVMLDLY 119

Query: 276 AKAGDA-SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
            K GD+  +        + + +SP   TY  +ITA   +    EA  +F+E+KE+G  P 
Sbjct: 120 GKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 179

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YNALL  Y K G  K+A  ++ EME +G+ P+  TY+ LI AYA AG  + A  + K
Sbjct: 180 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 239

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            +      P+ F Y  +++ +     +++  +   EM+ +   P+   YN++ID +G+  
Sbjct: 240 SLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRME 299

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L   M  F  M  +   PD +TWN+L+     CG       +F EM+  GY P   T+N
Sbjct: 300 KLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFN 359

Query: 515 IMINLLGE-----------------------------------QERWEDVKRLLGNMRAQ 539
           I+I   G                                    + RW+  +++   M   
Sbjct: 360 ILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 419

Query: 540 GLLPNVVTYTTLVDIYGQSGRF------DDAIE-------------------CLEGLSDQ 574
           GL  +   +  L+  Y  SG+F       D +E                   C   + ++
Sbjct: 420 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNE 479

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A  A   +  +G  P     N++I+   +      A  +L+ +++  LKPD VTY  LM 
Sbjct: 480 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 539

Query: 635 ALIRVDKFHK 644
              R   +HK
Sbjct: 540 MYGREGMYHK 549



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 125/539 (23%), Positives = 246/539 (45%), Gaps = 34/539 (6%)

Query: 109 SLNRVE--FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           S +R++  F+  +     P    ++ +   C  NS    A  +   +++   C +  + Y
Sbjct: 125 SWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN-RVTY 183

Query: 167 SILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + L+   G+    ++  E  +  +   ++P  +TYN LI+A AR    ++A  L   +  
Sbjct: 184 NALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLS 243

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLLNDVIVGFAKA 278
            G   D   Y  +I +  R  + + +L  + + E+    C    +   +L D+     K 
Sbjct: 244 KGLCPDEFTYCTLISAFNRAERYEKAL--ETFTEMRKTNCTPNIVTYNILIDIYGRMEKL 301

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D  K  +F+   Q    +P   T+ +++ +  N G   E   VF E+K +G  P    +
Sbjct: 302 DDMMKVFKFM---QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTF 358

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L++ Y + GY+  +  +   + R+G+ P   T++ L+ + A  GRW+    V +EM  
Sbjct: 359 NILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAE 418

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL-- 456
           +  + +   ++ ++  Y + G++ +  + + E++ S  +P      ++  TF    C   
Sbjct: 419 AGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP---LSGILCKTFVLAYCKCC 475

Query: 457 --HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
             + A  A +++   G  PD   +N +I    K G  +RA +L EE+++    P   TYN
Sbjct: 476 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYN 535

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            ++++ G +  +   + ++  MR  G  PN++TY TL+  Y + GR DDA          
Sbjct: 536 CLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDA---------- 585

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               F  M    ++P N   N+L+ ++       EA +V++YM E+G +P  +T+  L+
Sbjct: 586 -ARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALL 643



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 19/442 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A  R+    EA  L +    + L P   TY  LISA  R +  EKAL   ++MR
Sbjct: 218 YNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMR 277

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     + + Y+++I    R  K+D   + K++K ++      D    N ++  F   G 
Sbjct: 278 KTNCTPNIVTYNILIDIYGRMEKLDD--MMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 335

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++        +  G  P   T+  +I      G    +  +++ L  +GL+P    + A
Sbjct: 336 LTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAA 395

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G  +  E V  EM  +G+   +  ++ LI +YAN+G++   R  + E+E S 
Sbjct: 396 LMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSA 455

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQV-LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
            +P S I  +       +       Q+ L ++  +G  PD   +N MI    K   +  A
Sbjct: 456 KQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERA 515

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +   + +    ++PD +T+N L+  + + G Y +AEE+  EM+  G  P   TYN ++  
Sbjct: 516 VKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYS 575

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  R +D  R+ G+M A  + P+  T+ TLV  Y   G + +A+  +E +++      
Sbjct: 576 YTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEH----- 630

Query: 580 RVMRTDGLKPSNLALNSLINAF 601
                 G +P+ +   +L++ +
Sbjct: 631 ------GCQPTQITFKALLDGY 646



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 12/228 (5%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKY-NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           + + M+  G   +   YNVM+D +GK  +      + F  M    I PD  T+NT+I   
Sbjct: 96  LFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITAC 155

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +      A  LF+EM+E G  P   TYN ++++ G+    ++   LL  M A G+ PN+
Sbjct: 156 IQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNI 215

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY  L+  Y ++G           L D+A    + + + GL P      +LI+AF   +
Sbjct: 216 VTYNELIAAYARAG-----------LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAE 264

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
           R  +A      M++    P++VTY  L+    R++K   +   + F  
Sbjct: 265 RYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 312



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 14/226 (6%)

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F+ LK+ +S  +  D + Y  +I    +       +  F+ M  EG   + +T+N ++D 
Sbjct: 61  FESLKQDESYSL--DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 118

Query: 485 HFKCG-RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           + K G  +DR + LF+EM++    P   TYN MI    +    ++  RL   M+  G  P
Sbjct: 119 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCP 178

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N VTY  L+D+YG+ G   +A E L             M   G+ P+ +  N LI A+  
Sbjct: 179 NRVTYNALLDVYGKGGMHKEASELLVE-----------MEAAGISPNIVTYNELIAAYAR 227

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                EA A+ + +   GL PD  TY TL+ A  R +++ K   ++
Sbjct: 228 AGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETF 273


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 207/446 (46%), Gaps = 13/446 (2%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L   T N +++A  ++   E  +  +S M   G   D + Y+ +I +  R   ++ +   
Sbjct: 255 LNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF-- 312

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L        +E      N ++ G  K G   +A   L     +GL+P  ATY  ++  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
                 +EA+ +F+E+   G+ P   ++++L+    + G+L  A     EMERSG++PD 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y++LID +   G    A  +  EM       +   Y+  L G   +  +     +  E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+ PD + +  +I  + K   +  A+  F+ M+   ++PD +T+NTLID   K G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             RA+EL+++M  +   P   +Y  ++N         +   L   M  +G+ PN+VT  T
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  Y +SG    A E L             M ++G+ P + + N+LI+ + ++    +A
Sbjct: 613 LIKGYCRSGDMPKAYEYLSK-----------MISNGIIPDSFSYNTLIDGYLKEANLEKA 661

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKAL 636
           F ++  M++ GL+ +++TY  ++   
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGF 687



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 202/477 (42%), Gaps = 26/477 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L Y+ L+    +   L +       +R+ G        + ++  L RT  +D  L  ++Y
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVD--LAWEIY 245

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    IEL+   LN ++    K       M FL   +G G+     TY  +I A    
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  +       G++P    YNA+L G  K+G    A+ V+ EM + G+ P+  TY
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+           A+ +  EM      P+   +S ++      G   +     +EM+ 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG+ PD   Y ++ID F +   L  A+   D ML+ G   D +T+NT ++   K   +  
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ LF EM ERG  P   T+  +I    +    +    L   M    L P+ VTY TL+D
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 554 IY---GQSGR----FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKP 589
            +   G+ GR    +DD I                  C  GL  +A+N    M   G++P
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +  N+LI  +       +A+  L  M  NG+ PD  +Y TL+   ++     K F
Sbjct: 606 NLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 208/465 (44%), Gaps = 18/465 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A  R   + EAF L     S+      LTYNA++    +    ++A +++ +M 
Sbjct: 295 YNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML 354

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   +   Y+ ++  + R + I  +  Q+++ E+    +  D    + +I   A+ G 
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEA--QEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+      +  G+ P    Y  +I     +G   +A  + +E+   G       YN 
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L G  K     DA+ + +EM   G++PD +T++ LI  Y   G  + A  + + M  ++
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+   Y+ ++ G+   GE  R  ++  +M    + PD   Y  +++ F     L  A+
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEAL 592

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D+ML +GI P+ +T NTLI  + + G   +A E   +M   G  P + +YN +I+  
Sbjct: 593 NLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGY 652

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++   E    L+  M  +GL  N++TY  +++ +           C EG   +A    R
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGF-----------CAEGKMQEAEQVLR 701

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            M   G+ P     +SLIN         EAF     M + GL PD
Sbjct: 702 KMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 7/395 (1%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           L Y+ +++ L   G+ ++  +  +   +  LTP   TYN L+    R D++ +A  +  +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDE 387

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   D +++S +I  L R   +  +L+   ++E+E   I  D  +   +I GF + 
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNGHLYQALMH--FREMERSGIVPDNVIYTILIDGFCRN 445

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A++        G      TY   +  L       +A+ +F E+ E G+ P    +
Sbjct: 446 GALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTF 505

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L++GY K G +  A  +   M R+ + PD+ TY+ LID +  AG    A+ +  +M  
Sbjct: 506 TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y  +L G+   G       +  +M   G+ P+    N +I  + +   +  
Sbjct: 566 KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A     +M+S GI PD+ ++NTLID + K    ++A  L  EM++RG      TYN+++N
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILN 685

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
               + + ++ +++L  M   G+ P+  TY++L++
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 14/340 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F+ L+  G+     A N LL G V+ G++  A  +  E+ R G+  + +T ++++
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMV 264

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A     ++E+    L +ME      +   Y+ ++  Y   G  +  FQ+L    S G+E
Sbjct: 265 NALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME 324

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    YN ++    K      A      ML  G+ P+  T+NTL+    +      A+E+
Sbjct: 325 PGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEI 384

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F+EM  RG  P   +++ +I +L               M   G++P+ V YT L+D + +
Sbjct: 385 FDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +G   DA++    + D+       M   G     +  N+ +N   + +  A+A  +   M
Sbjct: 445 NGALSDALK----MRDE-------MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 618 KENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYLFFNI 654
            E G+ PD  T+TTL++   +   +DK   +F + +  N+
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 153/335 (45%), Gaps = 8/335 (2%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           + F+  E    VP  + +++L +    N ++  A  +   +     C+   + Y+  ++ 
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNG 476

Query: 173 LGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L + +   +A +L      + + P   T+  LI    ++ +++KALNL   M +     D
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + Y+ +I    +  ++  +  ++L+ ++    I  D      V+ GF  +G   +A+  
Sbjct: 537 KVTYNTLIDGFCKAGEMGRA--KELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                  G+ P   T   +I     SG   +A     ++  +G+ P + +YN L+ GY+K
Sbjct: 595 CDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLK 654

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L+ A  +++EME+ G+  +  TY+L+++ +   G+ + A  VL++M      P+   
Sbjct: 655 EANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGAT 714

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           YS ++ G+  +   +  F+   EM   G+ PD  F
Sbjct: 715 YSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 208/440 (47%), Gaps = 14/440 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L YNA++ A + +  L  A      M  DG   +   Y++++++L        +L   + 
Sbjct: 157 LAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL--SIL 213

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++       +    N ++  F +AG+   A R +GM +  GL P   T+ +++  +  +
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  +A  VF+E+   GL P   +YN L+ GY K G   +A  V +EM + G++PD  T+
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 333

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI     AG  E A  ++++M     + N   ++ ++ G+  +G        ++ MK 
Sbjct: 334 TSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ 393

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             ++P    YN +I+ +     +  A      M ++G++PD +T++T+I  + K      
Sbjct: 394 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 453

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL ++M E+G  P   TY+ +I +L  ++R  D   L  NM   GL P+  TYT+L+D
Sbjct: 454 AFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + + G  + A+     L D+ V A       G+ P  +  + LIN   +  R  EA  +
Sbjct: 514 GHCKEGNVESALS----LHDKMVKA-------GVLPDVVTYSVLINGLSKSARAMEAQQL 562

Query: 614 LQYMKENGLKPDVVTYTTLM 633
           L  +      P    Y  LM
Sbjct: 563 LFKLYHEDPIPANTKYDALM 582



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 227/497 (45%), Gaps = 48/497 (9%)

Query: 166 YSILIHAL-GRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+IL+ AL GR  +  EA  + +  R     P  +TYN L++A  R  +++ A  L+  M
Sbjct: 193 YNILVRALCGRGHR-KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+ G   + + ++ ++  + +  K++ +  +K++ E+  + +  DG   N ++ G+ KAG
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDA--RKVFDEMVREGLAPDGVSYNTLVGGYCKAG 309

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
            + +A+         G+ P   T+ ++I  +  +G    A  +  +++E GL+     + 
Sbjct: 310 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFT 369

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ G+ K G+L DA   V  M++  + P    Y+ LI+ Y   GR + AR +L EME  
Sbjct: 370 ALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 429

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   YS I++ Y    +    F++ ++M   GV PD   Y+ +I        L  A
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M+  G++PD  T+ +LID H K G  + A  L ++M + G  P   TY+++IN 
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI---------------YGQSGRFDDA 564
           L +  R  + ++LL  +  +  +P    Y  L+                 +   G  ++A
Sbjct: 550 LSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 609

Query: 565 IE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            +                        C  G   +A++  + M   G  P++ +  SLI  
Sbjct: 610 DKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRG 669

Query: 601 FGEDQRDAEAFAVLQYM 617
             E+    EA  V+Q +
Sbjct: 670 LFENGMVVEADQVIQQL 686



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 198/435 (45%), Gaps = 20/435 (4%)

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           GY    + Y+ V+ +L+     D+SL   ++ +  +  D +  +    N ++      G 
Sbjct: 151 GYVPSVLAYNAVLLALS-----DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGH 205

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +G G  P   TY  ++ A   +G    AE +   ++E GLKP    +N+
Sbjct: 206 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNS 265

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G ++DA  V  EM R G+ PD  +Y+ L+  Y  AG    A  V  EM    
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++      G  +R   ++++M+  G++ +   +  +ID F K   L  A+
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            A   M    I+P  + +N LI+ +   GR D A EL  EM+ +G  P   TY+ +I+  
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +         L   M  +G+LP+ +TY++L+ +     R  DA              F+
Sbjct: 446 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV-----------LFK 494

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   GL+P      SLI+   ++     A ++   M + G+ PDVVTY+ L+  L +  
Sbjct: 495 NMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554

Query: 641 KFHKVFSSYLFFNIY 655
           +  +  +  L F +Y
Sbjct: 555 RAME--AQQLLFKLY 567



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 126/303 (41%), Gaps = 22/303 (7%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+    +GR ++  E     + + L P  +TY+ +ISA  +N D   A  L  +M 
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D I YS +I+ L    ++  +    L+K +    ++ D      +I G  K G+
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDA--HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV---------------FEE 325
              A+         G+ P   TY+ +I  LS S R +EA+ +               ++ 
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L     K   K+  ALLKG+   G + +A+ V   M       D   YS+LI  +  AG 
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              A    K+M      PNS     ++ G  + G      QV++++ +     D      
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKA 700

Query: 446 MID 448
           +ID
Sbjct: 701 LID 703



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 22/251 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L   ++L +A +L +   +  L P   TY +LI    +  ++E AL+L  KM 
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 221 QDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYKEIE-------------CDKIELDG 265
           + G   D + YS++I  L+++ +      LL KLY E               C K EL  
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKS 592

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
            L   ++ GF   G  ++A +          +   + Y+ +I     +G  ++A +  ++
Sbjct: 593 VL--ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + + G  P + +  +L++G  + G + +A+ V+ ++     L D      LID   N G 
Sbjct: 651 MLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGN 710

Query: 386 WESARIVLKEM 396
            ++   VL  M
Sbjct: 711 VDAVLDVLHGM 721


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 206/427 (48%), Gaps = 9/427 (2%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  + S L    GR  +  +   + + QR+ P  + Y  LIS   ++ ++     L  
Sbjct: 323 YTYNSIISFLCKT-GRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFD 381

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M++     DF+ Y+ +I  L +  K+  +  +KL+ E+    ++ D      +I G+ K
Sbjct: 382 EMKRKKIVPDFVTYTSMIHGLCQAGKVVEA--RKLFSEMLSKGLKPDEVTYTALIDGYCK 439

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG+  +A          GL+P   TY A++  L   G    A  +  E+ E GL+P    
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YNAL+ G  K+G ++ A  ++ EM+ +G  PD  TY+ ++DAY   G    A  +L+ M 
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P    ++ ++ G+   G  +   +++K M   G+ P+   +N ++  +   N + 
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             +  +  M ++G+ PDT T+N LI  H K      A  L +EM E+G+     +YN +I
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLI 679

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
               +++++E+ ++L   MR  G +     Y   VD+  + G +++ +E    L D+A+ 
Sbjct: 680 KGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLE----LCDEAIE 735

Query: 578 AFRVMRT 584
              V +T
Sbjct: 736 KCLVKKT 742



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 209/451 (46%), Gaps = 13/451 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YN ++    +   +++A +L+ +M   G   D ++YS+++    +  ++   L  KL 
Sbjct: 253 VSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVL--KLM 310

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E++   ++ +    N +I    K G   +A + L + +   + P    Y  +I+    S
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G       +F+E+K   + P    Y +++ G  + G + +A  + SEM   G+ PDE TY
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LID Y  AG  + A  +  +M      PN   Y+ ++ G    GE     ++L EM  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++P+   YN +I+   K   +  A+   + M   G  PDTIT+ T++D + K G   +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL   M ++G  P   T+N+++N        ED +RL+  M  +G++PN  T+ +L+ 
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y           C+       +  ++ M   G+ P     N LI    + +   EA+ +
Sbjct: 611 QY-----------CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            + M E G      +Y +L+K   +  KF +
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 214/485 (44%), Gaps = 27/485 (5%)

Query: 161 SYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARN----------DDLE 210
           ++ L++ +    L  +  L EA  L  +     L Y  L+S  + N          D + 
Sbjct: 179 AHPLVFDVFFQVLVEAGLLLEAGKLFDKL----LNYGVLVSVDSCNLFLARLSNSFDGIR 234

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A  +  +  + G   + ++Y++++  L +  K+  +    L  ++E      D    + 
Sbjct: 235 TAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEA--HSLLIQMEFRGNVPDVVSYSV 292

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           ++ G+ +     K ++ +   Q  GL P   TY ++I+ L  +GR +EAE V   +K   
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    Y  L+ G+ K G +     +  EM+R  ++PD  TY+ +I     AG+   AR
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +  EM     KP+   Y+ ++ GY   GE +  F +  +M   G+ P+   Y  ++D  
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A      M  +G++P+  T+N LI+   K G  ++A +L EEM   G+FP T
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY  +++   +         LL  M  +GL P +VT+  L++ +  SG  +D    ++ 
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           + D+           G+ P+    NSL+  +           + + M   G+ PD  TY 
Sbjct: 593 MLDK-----------GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641

Query: 631 TLMKA 635
            L+K 
Sbjct: 642 ILIKG 646



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 12/339 (3%)

Query: 307 ITALSNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +  LSNS   I  A  VF E  E G+   T +YN +L    ++G +K+A  ++ +ME  G
Sbjct: 223 LARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRG 282

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            +PD  +YS+++D Y    +      +++E++    KPN + Y+ I++     G      
Sbjct: 283 NVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           QVL+ MK+  + PD   Y  +I  FGK   +      FD M  + I PD +T+ ++I   
Sbjct: 343 QVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGL 402

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G+   A +LF EM  +G  P   TY  +I+   +    ++   L   M  +GL PNV
Sbjct: 403 CQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV 462

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTYT LVD   + G  D A E L  +S++           GL+P+    N+LIN   +  
Sbjct: 463 VTYTALVDGLCKCGEVDIANELLHEMSEK-----------GLQPNVCTYNALINGLCKVG 511

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              +A  +++ M   G  PD +TYTT+M A  ++ +  K
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 147/313 (46%), Gaps = 14/313 (4%)

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA-GR 385
           K+ G  P    ++   +  V+ G L +A  +  ++   GVL    + +L +   +N+   
Sbjct: 175 KDWGAHPL--VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDG 232

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             +A  V +E        N+  Y+ IL      G+ +    +L +M+  G  PD   Y+V
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D + +   L   +   + +  +G++P+  T+N++I    K GR   AE++   M+ + 
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
            FP    Y  +I+  G+        +L   M+ + ++P+ VTYT+++    Q+G+  +A 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           +            F  M + GLKP  +   +LI+ + +     EAF++   M E GL P+
Sbjct: 413 K-----------LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461

Query: 626 VVTYTTLMKALIR 638
           VVTYT L+  L +
Sbjct: 462 VVTYTALVDGLCK 474



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 11/223 (4%)

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F+V +E    GV  +T  YN+++    +   +  A +   +M   G  PD ++++ ++D 
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + +  +  +  +L EE+Q +G  P   TYN +I+ L +  R  + +++L  M+ Q + P+
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            V YTTL+  +G+SG  + ++E            F  M+   + P  +   S+I+   + 
Sbjct: 357 NVVYTTLISGFGKSG--NVSVE---------YKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +  EA  +   M   GLKPD VTYT L+    +  +  + FS
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFS 448



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 14/201 (6%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           ++ +  A   F      G+  +T+++N ++    + G+   A  L  +M+ RG  P   +
Sbjct: 230 FDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVS 289

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+++++   + E+   V +L+  ++ +GL PN  TY +++    ++GR  +A + L    
Sbjct: 290 YSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL---- 345

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                  RVM+   + P N+   +LI+ FG+    +  + +   MK   + PD VTYT++
Sbjct: 346 -------RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398

Query: 633 MKALIRVDKF---HKVFSSYL 650
           +  L +  K     K+FS  L
Sbjct: 399 IHGLCQAGKVVEARKLFSEML 419


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 225/484 (46%), Gaps = 54/484 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + L   C+ N   ++ + +   + + G   +  +  +++ +L R  ++D  + +  ++ +
Sbjct: 149 DMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCV-RFFHRMV 207

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP------------------ 298
           E +K E+  Q L  VI    + G+  KA   +    G G+                    
Sbjct: 208 ESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKD 267

Query: 299 ------------------KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                               ATY+ +I   S+SG   EAE +FEE++E  ++     Y++
Sbjct: 268 RKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSS 327

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    ++G +K A  +  EM +  ++P+ HTY  LI     AG+ E+A I+L EM+   
Sbjct: 328 MISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N  I++  + GY  RG+     ++   M+  G+  D   YN++ +   K +    A 
Sbjct: 388 VDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAK 447

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+ +G++P+ +T+   I+ + K G    AE LF +M+++G  P   TYN +I+  
Sbjct: 448 CILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAY 507

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++E+ +   ++   M  +GLLP++ TY++L  I+G         EC+ G  D+A+  F 
Sbjct: 508 CKKEKVKQAHKIKSEMINKGLLPDLYTYSSL--IHG---------ECIVGRVDEALKLFN 556

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            MR  G+  +     S+I+   ++ R  EAF +   M + GL PD   +T+L      V 
Sbjct: 557 EMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSL------VG 610

Query: 641 KFHK 644
            FHK
Sbjct: 611 SFHK 614



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 190/382 (49%), Gaps = 16/382 (4%)

Query: 271 VIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           +++   + G+    +RF   M +      +  +   VI  L   G   +A+ + +E+   
Sbjct: 186 LLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGK 245

Query: 330 GL-KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           G+ KP    YN LL  YV     K  + ++  ME+  V+    TYS+LI  Y+++G  E 
Sbjct: 246 GIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEE 305

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  + +EM   + + + ++YS +++  R  G  +R F +  EM    + P+ H Y  +I 
Sbjct: 306 AEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIG 365

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A      M S+G++ + + +NT +D + + G+ D A  L   M+++G   
Sbjct: 366 GVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINA 425

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYNI+ N L +  R+++ K +L +M  +G+ PNVVT+T  ++IY           C 
Sbjct: 426 DVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIY-----------CK 474

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           EG   +A   FR M   G  P+ +  N+LI+A+ + ++  +A  +   M   GL PD+ T
Sbjct: 475 EGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYT 534

Query: 629 YTTLMKA---LIRVDKFHKVFS 647
           Y++L+     + RVD+  K+F+
Sbjct: 535 YSSLIHGECIVGRVDEALKLFN 556



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 172/359 (47%), Gaps = 2/359 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L++A     D +    ++  M ++        YS++IQ  + +  I+ +  +K++
Sbjct: 253 FTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEA--EKIF 310

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    IE+D  + + +I    + G+  +A           + P   TY A+I  +  +
Sbjct: 311 EEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKA 370

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+   AE +  E++  G+      +N  + GY + G + +A  + + ME+ G+  D  TY
Sbjct: 371 GQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTY 430

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L +      R++ A+ +L  M     KPN   ++  +  Y   G      ++ ++M+ 
Sbjct: 431 NILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEK 490

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   YN +ID + K   +  A      M+++G+ PD  T+++LI      GR D 
Sbjct: 491 KGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDE 550

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           A +LF EM+ +G      TY  MI+ L ++ R ++  +L   M   GL+P+   +T+LV
Sbjct: 551 ALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 155/339 (45%), Gaps = 8/339 (2%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISAC 203
           ++  ++K  + +S    YSILI     S  + EA  + +  R     +    Y+++IS  
Sbjct: 274 ILKLMEKEQVVFSVAT-YSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWS 332

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            R  ++++A  L  +M Q     +   Y  +I  + +  +++++  + L  E++   ++L
Sbjct: 333 RRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAA--EILLLEMQSKGVDL 390

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +  + N  + G+ + G   +A+R   + +  G++    TY  +   L    R  EA+ + 
Sbjct: 391 NLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCIL 450

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             + E G+KP    +   ++ Y K G L +AE +  +ME+ G +P+  TY+ LIDAY   
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKK 510

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            + + A  +  EM      P+ + YS ++ G    G      ++  EM+  G+  +   Y
Sbjct: 511 EKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATY 570

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             MI    K      A   +D M+  G+ PD   + +L+
Sbjct: 571 TSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 246/524 (46%), Gaps = 24/524 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           ++ +L++LC+    +D A  +   L++  +     + YS L+  L + ++L  A  LL +
Sbjct: 161 YNIVLRSLCA-RGDLDRAVTLFDSLRRRQVAPD-RITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTN 242
             R R+ P  + YNAL+  C +  + EK + +  K+ +D G   +   Y++++  L +  
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +     + ++++ +  + ++ D      +I G  ++GD   A R        GL    A 
Sbjct: 279 RFKE--VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y +++     +GR  EA   ++    +GL+   + YN ++KG    G + +A  +   +E
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 363 RS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +    +PD  T+  LI      G    A  + +E  VS  + + F YS ++ G  + G  
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +V ++M   G +P++H YN +I  F +      A+  + +M   G  P  IT+NTL
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K  +Y  A  +  EM E G+ P  TTY  +I  L   ++ +D   +   +  +GL
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL-NSLINA 600
             +V+ +  L  I+G          C  G  D+A++ F  M+     P NL   N+L++ 
Sbjct: 576 KVDVMMHNIL--IHGL---------CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             E     +A  +   + E+GL+PD+++Y T +K L   D+ H+
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 214/482 (44%), Gaps = 63/482 (13%)

Query: 189 QRLTP--LTYNALI-SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +R+ P   TYN ++ S CAR D L++A+ L   +R+     D I YS ++  L + +++D
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGD-LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLD 210

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYA 304
            +L   L  E+   +++ D    N ++ G  KAG+  K MR    + +  G  P  ATY 
Sbjct: 211 HAL--DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++  L   GR  E   V+E +  + L+P    Y  L+ G  + G +  A  V SE+ ++
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G++ D   Y+ L+  +  AGR + A                F  S   AG R+     RT
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAW--------------KFWDSAGFAGLRN----LRT 370

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITWNTLI 482
                             YN+MI        +  A+  +D +L + +   PDT+T+ TLI
Sbjct: 371 ------------------YNIMIKGLFDSGMVDEAIELWD-LLEKDVACIPDTVTFGTLI 411

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               + G  ++A  +FEE +  G      +Y+ MIN L    R  D  ++   M   G  
Sbjct: 412 HGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN   Y  L+  + Q  R  DA+     ++D           +G  P+ +  N+LI+   
Sbjct: 472 PNSHIYNALISGFCQVYRTSDAVRIYSKMAD-----------NGCSPTVITYNTLIDGLC 520

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           + ++  EA +V + M ENG  PD+ TY +L++ L    K     S      I+K + Y G
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALS------IWKQILYKG 574

Query: 663 EK 664
            K
Sbjct: 575 LK 576



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 12/397 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSK 218
           + Y ILIH L RS  +  A  +      T L      YN+L+    +   +++A      
Sbjct: 300 ITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDS 359

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
               G   +   Y+++I+ L  +  +D +  L   L K++ C     D      +I G  
Sbjct: 360 AGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP---DTVTFGTLIHGLC 415

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G A+KA      A+  G      +Y+++I  L N GR ++A  V+E++ + G KP + 
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YNAL+ G+ ++    DA  + S+M  +G  P   TY+ LID    A +++ A  V +EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +   P+   Y  ++ G     +      + K++   G++ D   +N++I        +
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 457 HHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
             A+  F  M   +   P+ +T+NTL+D  ++ G  D+A  L+  + E G  P   +YN 
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            I  L   +R  +  +LL  + ++G++P V+T+  LV
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 188/442 (42%), Gaps = 65/442 (14%)

Query: 271 VIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           V+  F++A     A+  F  +   +G +P   ++ A++ A   + R  +A+A F  L   
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG 148

Query: 330 G----LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
                + P  + YN +L+     G L  A  +   + R  V PD  TYS L+   A   R
Sbjct: 149 AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDR 208

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL-KEMKSSGVEPDTHFYN 444
            + A  +L EM  S  +P+   Y+ +L G    GE+++  +V  K +K  G  P+   YN
Sbjct: 209 LDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           VM+D   K+         ++RM++  ++PD IT+  LI    + G  D A  ++ E+ + 
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 505 GYFPCTTTYNIMINLLGE----QERWE--DVKRLLG-------NMRAQGL---------- 541
           G       YN ++    +    QE W+  D     G       N+  +GL          
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAI 388

Query: 542 ------------LPNVVTYTTLVDIYGQSGRFDDAIECLE-------------------G 570
                       +P+ VT+ TL+    Q+G  + A    E                   G
Sbjct: 389 ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMING 448

Query: 571 LSD-----QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           L +      AV  +  M  DG KP++   N+LI+ F +  R ++A  +   M +NG  P 
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPT 508

Query: 626 VVTYTTLMKALIRVDKFHKVFS 647
           V+TY TL+  L + +K+ +  S
Sbjct: 509 VITYNTLIDGLCKAEKYQEASS 530



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 169/385 (43%), Gaps = 12/385 (3%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           RV  ++ ++   + A +++SL+K  C +     +  A   W             Y+I+I 
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGR---VQEAWKFWDSAGFAGLRNLRTYNIMIK 376

Query: 172 ALGRSEKLYEAF----LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
            L  S  + EA     LL +     P  +T+  LI    +N    KA  +  + R  G  
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            D  +YS +I  L    ++  ++  K+Y++++ D  + +  + N +I GF +    S A+
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAV--KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAV 494

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           R        G SP   TY  +I  L  + +  EA +V  E+ E+G  P    Y +L++G 
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPN 404
                + DA  +  ++   G+  D   +++LI    +AG+ + A  V  +M E  +  PN
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ ++ G  + G   +   +   +   G+EPD   YN  I      + +H  +   D
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCG 489
            +LS GI P  ITWN L+    K G
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIKYG 699


>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 859

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 227/525 (43%), Gaps = 65/525 (12%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    +K  E F  + S     T   Y A+I+A  RN
Sbjct: 125 YMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRN 184

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
                +L L++ M+Q+      + Y+ VI +  R   +D   L  L+ E+  +       
Sbjct: 185 GQFHASLELLNGMKQERVSPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHE------- 236

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                                       G+ P   TY  ++ A ++ G   EAE VF  +
Sbjct: 237 ----------------------------GIQPDVITYNTLLGACAHRGLGDEAEMVFRTM 268

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            ESG+ P    Y+ L++ + K+  L+    ++ EME  G LPD  +Y++L++AYA  G  
Sbjct: 269 NESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSI 328

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V ++M+ +    N+  YS +L  Y   G +     +  EMK S  +PD   YN++
Sbjct: 329 KEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNIL 388

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I  FG+       +  F  M+ E +EP+  T+  LI    K G Y+ A+++   M E+G 
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGI 448

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P +  Y  +I   G+   +E+   +   M   G  P V TY + +  + + G + +A  
Sbjct: 449 VPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEA 508

Query: 567 CLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            L                         G  ++AV ++  M     +P+ L L  +++ + 
Sbjct: 509 ILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYC 568

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
                 E+    Q +K +G+ P V+ Y  ++    + D+ +  ++
Sbjct: 569 SAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYN 613



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 210/449 (46%), Gaps = 15/449 (3%)

Query: 204 ARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           A+  D +++L L   M RQ     +   Y+++I  L R   +D    ++++ E+  + + 
Sbjct: 111 AQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKC--REVFDEMPSNGVA 168

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE-A 321
               +   VI  + + G    ++  L   +   +SP   TY  VI A +  G   E    
Sbjct: 169 RTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLG 228

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E++  G++P    YN LL      G   +AE V   M  SG++PD +TYS L+  + 
Sbjct: 229 LFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFG 288

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R E    +L+EME     P+   Y+ +L  Y + G  +    V ++M+++G   +  
Sbjct: 289 KLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAA 348

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+V+++ +GK+         F  M     +PD  T+N LI    + G +     LF +M
Sbjct: 349 TYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 408

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E    P   TY  +I   G+   +ED K++L +M  +G++P+   YT +++ +GQ+   
Sbjct: 409 VEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAA-- 466

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                    L ++A+  F  M   G  P+    NS I+AF       EA A+L  M E+G
Sbjct: 467 ---------LYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESG 517

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           LK DV ++  ++KA  +  ++ +   SY+
Sbjct: 518 LKRDVHSFNGVIKAFRQGGQYEEAVKSYV 546



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 177/400 (44%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA+ GD  +++R F  M + +   P    Y  +IT L   G   +   VF
Sbjct: 100 LNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVF 159

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+  +G+      Y A++  Y + G    +  +++ M++  V P   TY+ +I+A A  
Sbjct: 160 DEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARG 219

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L     RG       V + M  SG+ PD + 
Sbjct: 220 GLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINT 279

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ ++ TFGK N L         M S G  PD  ++N L++ + + G    A ++F +MQ
Sbjct: 280 YSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQ 339

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G      TY++++NL G+  R++DV+ +   M+     P+  TY  L+ ++G+ G F 
Sbjct: 340 AAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFK 399

Query: 563 DAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +                            GL + A      M   G+ PS+ A   +I
Sbjct: 400 EVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVI 459

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            AFG+     EA  V   M E G  P V TY + + A  R
Sbjct: 460 EAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFAR 499



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 198/446 (44%), Gaps = 43/446 (9%)

Query: 165 LYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARND-DLEKALNLMSK 218
           +Y+ +I+A GR+ + + +  L    +++R++P  LTYN +I+ACAR   D E  L L ++
Sbjct: 173 VYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAE 232

Query: 219 MRQDGYHCDFINY-----------------------------------SLVIQSLTRTNK 243
           MR +G   D I Y                                   S ++Q+  + N+
Sbjct: 233 MRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNR 292

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++   + +L +E+E      D    N ++  +A+ G   +AM      Q  G     ATY
Sbjct: 293 LEK--VSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATY 350

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + ++      GR  +   +F E+K S   P    YN L++ + + GY K+   +  +M  
Sbjct: 351 SVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVE 410

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             V P+  TY  LI A    G +E A+ +L  M      P+S  Y+ ++  +     ++ 
Sbjct: 411 ENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEE 470

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V   M   G  P    YN  I  F +      A A   RM   G++ D  ++N +I 
Sbjct: 471 ALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIK 530

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G+Y+ A + + EM++    P   T  +++++       ++ +     ++A G+LP
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE 569
           +V+ Y  ++ +Y ++ R +DA   ++
Sbjct: 591 SVMCYCLMLALYAKNDRLNDAYNLID 616



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 156/359 (43%), Gaps = 3/359 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ L++   ++   +   ++  +M+      D   Y+++IQ           +   L+ 
Sbjct: 349 TYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV--TLFH 406

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  + +E + +    +I    K G    A + L      G+ P +  Y  VI A   + 
Sbjct: 407 DMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAA 466

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  VF  + E G  P  + YN+ +  + + G  K+AE ++S M  SG+  D H+++
Sbjct: 467 LYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 526

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I A+   G++E A     EME ++ +PN      +L+ Y   G    + +  +E+K+S
Sbjct: 527 GVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKAS 586

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC-GRYDR 493
           G+ P    Y +M+  + K + L+ A    D M++  +         +I   F     +  
Sbjct: 587 GILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQI 646

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            E +F+++   G       YN ++  L    + E   R+L     +GL P +   + LV
Sbjct: 647 VEYVFDKLNSEGCGLGMRFYNALLEALWWMFQRERAARVLNEASKRGLFPELFRKSKLV 705



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 13/280 (4%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           ++L+   +A  G W+ +  + K M+     KPN  IY+ ++      G   +  +V  EM
Sbjct: 103 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEM 162

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-R 490
            S+GV    + Y  +I+ +G+    H ++   + M  E + P  +T+NT+I+   + G  
Sbjct: 163 PSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 222

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           ++    LF EM+  G  P   TYN ++     +   ++ + +   M   G++P++ TY+ 
Sbjct: 223 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 282

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           LV  +G+  R +   E L           R M + G  P   + N L+ A+ E     EA
Sbjct: 283 LVQTFGKLNRLEKVSELL-----------REMESGGNLPDITSYNVLLEAYAELGSIKEA 331

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
             V + M+  G   +  TY+ L+    +  ++  V   +L
Sbjct: 332 MDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFL 371



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/396 (21%), Positives = 153/396 (38%), Gaps = 49/396 (12%)

Query: 101 SALASSPSSLNRVE-----FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQK 155
           S L  +   LNR+E      +  ES   +P    +++L    +   SI  A  V   +Q 
Sbjct: 281 SYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQA 340

Query: 156 HNLCYSYELLYSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLE 210
              C +    YS+L++  G   R + + + FL  +     P   TYN LI         +
Sbjct: 341 AG-CVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFK 399

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           + + L   M ++    +   Y  +I +  +    + +  +K+   +    I    +    
Sbjct: 400 EVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDA--KKILLHMNEKGIVPSSKAYTG 457

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           VI  F +A    +A+        VG +P   TY + I A +  G   EAEA+   + ESG
Sbjct: 458 VIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESG 517

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           LK    ++N ++K + + G  ++A     EME++   P+E T  +++  Y +AG  + + 
Sbjct: 518 LKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESE 577

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYR---------------------------------- 416
              +E++ S   P+   Y  +LA Y                                   
Sbjct: 578 EQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGD 637

Query: 417 --DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
             D   WQ    V  ++ S G      FYN +++  
Sbjct: 638 FDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEAL 673


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 208/440 (47%), Gaps = 14/440 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L YNA++ A + +  L  A      M  DG   +   Y+++I++L        +L   + 
Sbjct: 117 LAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL--SIL 173

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++       +    N ++  F +AG+   A R +GM    GL P   T+ +++  +  +
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  +A  VF+E+   GL P   +YN L+ GY K G   +A  V +EM + G++PD  T+
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 293

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI     AG  E A  ++++M     + N   ++ ++ G+  +G        ++ M+ 
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             ++P    YN +I+ +     +  A      M ++G++PD +T++T+I  + K      
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 413

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL ++M E+G  P   TY+ +I +L E++R  D   L  NM   GL P+  TYT+L+D
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + + G  + A+     L D+ V A       G+ P  +  + LIN   +  R  EA  +
Sbjct: 474 GHCKEGNVERALS----LHDKMVKA-------GVLPDVVTYSVLINGLSKSARAMEAQQL 522

Query: 614 LQYMKENGLKPDVVTYTTLM 633
           L  +      P    Y  LM
Sbjct: 523 LFKLYHEEPIPANTKYDALM 542



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 197/435 (45%), Gaps = 20/435 (4%)

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           GY    + Y+ V+ +L+     D+SL   ++ +  +  D +  +    N +I      G 
Sbjct: 111 GYVPSVLAYNAVLLALS-----DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGH 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +G G  P   TY  ++ A   +G    AE +   + + GLKP    +N+
Sbjct: 166 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNS 225

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G ++DA  V  EM R G+ PD  +Y+ L+  Y  AG    A  V  EM    
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++      G  +    ++++M+  G++ +   +  +ID F K   L  A+
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            A   M    I+P  + +N LI+ +   GR D A EL  EM+ +G  P   TY+ +I+  
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +         L   M  +G+LP+ +TY++L+ +  +  R  DA              F+
Sbjct: 406 CKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV-----------LFK 454

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   GL+P      SLI+   ++     A ++   M + G+ PDVVTY+ L+  L +  
Sbjct: 455 NMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 514

Query: 641 KFHKVFSSYLFFNIY 655
           +  +  +  L F +Y
Sbjct: 515 RAME--AQQLLFKLY 527



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 221/501 (44%), Gaps = 56/501 (11%)

Query: 166 YSILIHAL-GRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+ILI AL GR  +  EA  + +  R     P  +TYN L++A  R  +++ A  L+  M
Sbjct: 153 YNILIRALCGRGHR-KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   + + ++ ++  + +  K++ +  +K++ E+  + +  DG   N ++ G+ KAG
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDA--RKVFDEMMREGLAPDGVSYNTLVGGYCKAG 269

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL-------- 331
            + +A+         G+ P   T+ ++I  +  +G    A  +  +++E GL        
Sbjct: 270 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFT 329

Query: 332 ---------------------------KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
                                      KP    YNAL+ GY  +G + +A  ++ EME  
Sbjct: 330 ALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD  TYS +I AY       SA  + ++M      P++  YS ++    +       
Sbjct: 390 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             + K M   G++PD   Y  +ID   K   +  A++  D+M+  G+ PD +T++ LI+ 
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K  R   A++L  ++      P  T Y+ +++   + E  + V  LL     +GL+  
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAE-LKSVLALLKGFCMKGLMNE 568

Query: 545 V-VTYTTLVDIYGQSGRFDDAI-------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
               Y +++D   ++   D ++        C  G   +A++  + M   G  P++ +  S
Sbjct: 569 ADKVYQSMLD---RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTIS 625

Query: 597 LINAFGEDQRDAEAFAVLQYM 617
           LI    E+    EA  V+Q +
Sbjct: 626 LIRGLFENGMVVEADQVIQQL 646



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/430 (22%), Positives = 182/430 (42%), Gaps = 38/430 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LIH + ++  L  A  L ++ R     +  +T+ ALI    +   L+ AL  +  MR
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q       + Y+ +I       ++D +  ++L  E+E   ++ D    + +I  + K  D
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEA--RELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          G+ P   TY+++I  L    R  +A  +F+ + + GL+P    Y +
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+ K G ++ A  +  +M ++GVLPD  TYS+LI+  + + R   A+ +L ++    
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE 530

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  Y  ++   R + E +    +LK     G+                   ++ A 
Sbjct: 531 PIPANTKYDALMHCCR-KAELKSVLALLKGFCMKGL-------------------MNEAD 570

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  ML      D   ++ LI  H + G   +A    ++M +RG+ P +T+   +I  L
Sbjct: 571 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            E     +  +++  +     L +      L+D+    G  D  ++ L G          
Sbjct: 631 FENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHG---------- 680

Query: 581 VMRTDGLKPS 590
            M  DGL PS
Sbjct: 681 -MAKDGLLPS 689


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 223/495 (45%), Gaps = 41/495 (8%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R  L   ++N LI        L  +L+   K+ + G+  D + ++ ++  L   ++I  
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194

Query: 247 SL--LQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQG 293
           +L     + +    + + L  Q++           N +I G    G   +A   +    G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            GL     TY  ++  +   G T  A  +  +++E+ +KP    Y+A++    K G+  D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A+++ SEM   G+ P+  TY+ +ID + + GRW  A+ +L++M      P+   ++ +++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G+     ++  EM    + PDT  YN MI  F K+N    A   FD M S    P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+NT+ID + +  R D   +L  E+  RG    TTTYN +I+   E +     + L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--------------------- 572
             M + G+ P+ +T   L+  + ++ + ++A+E  E +                      
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 573 ---DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              D+A + F  +   G++P     N +I+ F      ++A  +   MK+NG +PD  TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 630 TTLMKALIRVDKFHK 644
            TL++  ++  +  K
Sbjct: 611 NTLIRGCLKAGEIDK 625



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 209/462 (45%), Gaps = 48/462 (10%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ + VI    R N+ D ++   LY+++E  +I L+    N +I  F      S ++   
Sbjct: 107 VDCNKVIGVFVRMNRPDVAI--SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRT---------------IEAEAVFEELKESGLKP 333
           G    +G  P   T+  ++  L    R                +EA A+F+++ E GL P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N L+ G    G + +A  +V++M   G+  D  TY  +++     G  +SA  +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +ME +H KP+  IYS I+      G       +  EM   G+ P+   YN MID F  +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A      M+   I PD +T+N LI    K G+   AE+L +EM  R  FP T TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N MI    +  R++D K +   M +    P+VVT+ T++D+Y ++ R D+ ++ L  +S 
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460

Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + + A                        F+ M + G+ P  +  N L+  F E+++  E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           A  + + ++ + +  D V Y  ++  +    +VD+   +F S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 44/552 (7%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R +P  ++  + L+K  C  +    L++++ ++ +   L +  +++ ++ L+H L   ++
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 179 LYEAF----------------LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
           + EA                 L  Q     LTP  +T+N LI+       + +A  L++K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G H D + Y  ++  + +     S+L   L  ++E   I+ D  + + +I    K 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--NLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A          G++P   TY  +I    + GR  +A+ +  ++ E  + P    +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   VK G L +AE +  EM    + PD  TY+ +I  +    R++ A+ +   M  
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-- 427

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
             A P+   ++ I+  Y          Q+L+E+   G+  +T  YN +I  F + + L+ 
Sbjct: 428 --ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M+S G+ PDTIT N L+    +  + + A ELFE +Q       T  YNI+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            + +  + ++   L  ++   G+ P+V TY  ++   G  G+          +SD  V  
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS--GFCGK--------SAISDANV-L 594

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M+ +G +P N   N+LI    +     ++  ++  M+ NG   D  T     + + R
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654

Query: 639 VDKFHKVFSSYL 650
           V    ++  +YL
Sbjct: 655 VSD-EEIIENYL 665



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/380 (21%), Positives = 156/380 (41%), Gaps = 14/380 (3%)

Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH---NLC 159
           +  + S+LN +  K+ E++      ++ +++  LC      D  Y     L+K    N+ 
Sbjct: 274 MGDTKSALNLLS-KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV- 331

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           ++Y  +      + GR             + + P  LT+NALISA  +   L +A  L  
Sbjct: 332 FTYNCMIDGFC-SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M       D + Y+ +I    + N+ D +  + ++  +       D    N +I  + +
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--KHMFDLMA----SPDVVTFNTIIDVYCR 444

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           A    + M+ L      GL   T TY  +I           A+ +F+E+   G+ P T  
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            N LL G+ +   L++A  +   ++ S +  D   Y+++I       + + A  +   + 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +   +P+   Y+ +++G+  +        +  +MK +G EPD   YN +I    K   + 
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 458 HAMAAFDRMLSEGIEPDTIT 477
            ++     M S G   D  T
Sbjct: 625 KSIELISEMRSNGFSGDAFT 644


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 247/568 (43%), Gaps = 34/568 (5%)

Query: 98  ESASALASSPSS--LNRVEFK--LAESYRAV-------PAP---LWHSLLKNLCSSNSSI 143
           E+ SA + +P++  L R+  +  LAE+ R V        AP   L   L++NLC    + 
Sbjct: 36  EAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTS 95

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALIS 201
           D A  + +  +       +   Y+ L+    R  +L  A  L     + P   TY  +I 
Sbjct: 96  DAARVLRAAERSGTAVDVFA--YNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIR 153

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
                  + +AL+L+  M   G     + Y+++++++ ++     ++  ++  E+     
Sbjct: 154 GLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM--EVLDEMRAKGC 211

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
             +    N +I G  + G    A  FL      G  P T +Y  V+  L  + R  + E 
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E+ E    P    ++ L++ + + G ++ A  V+ +M   G   +    +++I+   
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             GR + A   L  M      P++  Y+ +L G      W+   ++LKEM      P+  
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            +N  I    +   +  A    ++M   G E + +T+N L++     GR D A ELF  M
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM 451

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
             +   P T TY  ++  L   ER +    LL  M  +   PNVVT+  LV  + Q G  
Sbjct: 452 PCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D+AIE +E + +            G  P+ +  N+L++   +D    EA  +L  +  NG
Sbjct: 509 DEAIELVEQMMEH-----------GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + PD+VTY++++  L R D+  +    +
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMF 585



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 226/491 (46%), Gaps = 23/491 (4%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLE 210
           H  C    + Y++L+ A+ +S    +A  +    R    TP  +TYN +I+   R   ++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A   ++++   G+  D ++Y+ V++ L    + +   +++L+ E+  +K  +  ++  D
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED--VEELFAEMM-EKNCMPNEVTFD 289

Query: 271 VIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++V F  + G   +A++ L    G G +  T     VI  +   GR  +A      +   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P T +Y  +LKG  +    +DA+ ++ EM R    P+E T++  I      G  E A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +++++M     + N   Y+ ++ G+  +G      ++   M     +P+T  Y  ++  
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTG 466

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 L  A      ML +   P+ +T+N L+    + G  D A EL E+M E G  P 
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +++ + +    E+   LL  + + G+ P++VTY++++ +  +  R ++AI+   
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK--- 583

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    F +++  G++P  +  N ++ A  +      A     YM  NG  P+ +TY
Sbjct: 584 --------MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 630 TTLMKALIRVD 640
            TL++ L   D
Sbjct: 636 ITLIEGLANED 646



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 174/419 (41%), Gaps = 12/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + ++LK LC++    D+       ++K+  C   E+ + +L+    R   +  A  + ++
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                        N +I+   +   ++ A   ++ M   G   D I+Y+ V++ L R  +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +  ++L KE+       +    N  I    + G   +A   +      G      TY
Sbjct: 371 WEDA--KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A++      GR   A  +F  +     KP T  Y  LL G      L  A  +++EM +
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               P+  T+++L+  +   G  + A  ++++M      PN   Y+ +L G       + 
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  + S+GV PD   Y+ +I    + + +  A+  F  +   G+ P  + +N ++ 
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    D A + F  M   G  P   TY  +I  L  ++  ++ + LL  + ++G+L
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 223/495 (45%), Gaps = 41/495 (8%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R  L   ++N LI        L  +L+   K+ + G+  D + ++ ++  L   ++I  
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194

Query: 247 SL--LQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQG 293
           +L     + +    + + L  Q++           N +I G    G   +A   +    G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            GL     TY  ++  +   G T  A  +  +++E+ +KP    Y+A++    K G+  D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A+++ SEM   G+ P+  TY+ +ID + + GRW  A+ +L++M      P+   ++ +++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G+     ++  EM    + PDT  YN MI  F K+N    A   FD M S    P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+NT+ID + +  R D   +L  E+  RG    TTTYN +I+   E +     + L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--------------------- 572
             M + G+ P+ +T   L+  + ++ + ++A+E  E +                      
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 573 ---DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              D+A + F  +   G++P     N +I+ F      ++A  +   MK+NG +PD  TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 630 TTLMKALIRVDKFHK 644
            TL++  ++  +  K
Sbjct: 611 NTLIRGCLKAGEIDK 625



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 209/462 (45%), Gaps = 48/462 (10%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ + VI    R N+ D ++   LY+++E  +I L+    N +I  F      S ++   
Sbjct: 107 VDCNKVIGVFVRMNRPDVAI--SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRT---------------IEAEAVFEELKESGLKP 333
           G    +G  P   T+  ++  L    R                +EA A+F+++ E GL P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N L+ G    G + +A  +V++M   G+  D  TY  +++     G  +SA  +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +ME +H KP+  IYS I+      G       +  EM   G+ P+   YN MID F  +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A      M+   I PD +T+N LI    K G+   AE+L +EM  R  FP T TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N MI    +  R++D K +   M +    P+VVT+ T++D+Y ++ R D+ ++ L  +S 
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460

Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + + A                        F+ M + G+ P  +  N L+  F E+++  E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           A  + + ++ + +  D V Y  ++  +    +VD+   +F S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 248/552 (44%), Gaps = 44/552 (7%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R +P  ++  + L+K  C  +    L++++ ++ +   L +  +++ ++ L+H L   ++
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 179 LYEAF----------------LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
           + EA                 L  Q     LTP  +T+N LI+       + +A  L++K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G H D + Y  ++  + +     S+L   L  ++E   I+ D  + + +I    K 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--NLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A          G++P   TY  +I    + GR  +A+ +  ++ E  + P    +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+   VK G L +AE +  EM    + PD  TY+ +I  +    R++ A+ +   M  
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-- 427

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
             A P+   ++ I+  Y          Q+L+E+   G+  +T  YN +I  F + + L+ 
Sbjct: 428 --ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M+S G+ PDTIT N L+    +  + + A ELFE +Q       T  YNI+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            + +  + ++   L  ++   G+ P+V TY  +  I G  G+          +SD  V  
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM--ISGFCGK--------SAISDANV-L 594

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M+ +G +P N   N+LI    +     ++  ++  M+ NG   D  T   ++  LI 
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-IKMVADLIT 653

Query: 639 VDKFHKVFSSYL 650
             +  K FS  L
Sbjct: 654 DGRLDKSFSDML 665


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 216/484 (44%), Gaps = 53/484 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+I  L +  +L EA  L  R +    +P  +TYN+LI    +  DLE+   L+S+MR
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D + Y                                     N +I  F+K G 
Sbjct: 263 KSGCAADVVTY-------------------------------------NALINCFSKFGR 285

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA  + G  +  G+     T++  + A    G   EA  +F +++  G+ P    Y +
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G L DA  ++ EM   G++P+  TY++++D     G+   A  VL  ME   
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K N  +Y+ ++ G+      +R   +L +MK+ G+E D   Y  +I    K   +  A 
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           +   +M   G+ P+T+ + T++D  FK G+   A  L  ++ + G+ P   TY  +I+ L
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGL 525

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +     +       MR  GL PNV  YT L+D + + G  + A+  +  + D+ ++  +
Sbjct: 526 CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDK 585

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           V+ T           SLI+ + +     +AFA+   M E+GL+ D+  YT  +     ++
Sbjct: 586 VVYT-----------SLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMN 634

Query: 641 KFHK 644
              +
Sbjct: 635 MMQE 638



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 212/464 (45%), Gaps = 19/464 (4%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           A  L  R+   P   + L+S  A +  L+ A+  ++++RQ     +    + ++  L R 
Sbjct: 123 ALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN 182

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF-AKAGDASKAMRFLGMAQGVGLSPKT 300
            +    L+++L+     D + +      ++++ F  K G+  +A       + +G SP  
Sbjct: 183 RQ--GGLVRRLF-----DLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDV 235

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY ++I      G   E E +  E+++SG       YNAL+  + K G ++ A     E
Sbjct: 236 VTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGE 295

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+R GV+ +  T+S  +DA+   G  + A  +  +M V    PN F Y+ ++ G    G 
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L EM   G+ P+   Y VM+D   K   +  A      M   G++ + + + T
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LI  HF     +RA +L  +M+ +G     + Y  +I  L + ++ ++ K LL  M   G
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L PN V YTT++D   ++G+  +A+  L  + D            G +P+ +   +LI+ 
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKILDS-----------GFQPNVVTYCALIDG 524

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             +    +EA +    M+E GL P+V  YT L+    ++   +K
Sbjct: 525 LCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 179/390 (45%), Gaps = 39/390 (10%)

Query: 294 VGLSPKTATYAAVI----TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           + L P+ +   +V+    + L++ G   +A      +++  + P T+  N +L   +++ 
Sbjct: 124 LALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHIL---LRLA 180

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
             +    V    +   V P+  T++++ID     G    AR +   M+     P+   Y+
Sbjct: 181 RNRQGGLVRRLFDLLPV-PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYN 239

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ GY   G+ +   Q++ EM+ SG   D   YN +I+ F K+  +  A + F  M  +
Sbjct: 240 SLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ 299

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G+  + +T++T +D   K G    A +LF +M+ RG  P   TY  +++   +  R +D 
Sbjct: 300 GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 359

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------------------ 571
             LL  M  QGL+PNVVTYT +VD   + G+  +A   L  +                  
Sbjct: 360 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHG 419

Query: 572 ------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                 S++A++    M+  G++       +LI    +DQ+  EA ++L  M   GL+P+
Sbjct: 420 HFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479

Query: 626 VVTYTTLMKALIRVDK-------FHKVFSS 648
            V YTT+M AL +  K        HK+  S
Sbjct: 480 TVIYTTIMDALFKAGKESEAVALLHKILDS 509



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 176/399 (44%), Gaps = 28/399 (7%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
            A  G    A+R L   + + + P T T   ++  L+ + +      +F+ L      P 
Sbjct: 144 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPN 199

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              +N ++    K G L +A  +   M+  G  PD  TY+ LID Y   G  E    ++ 
Sbjct: 200 VFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVS 259

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM  S    +   Y+ ++  +   G  ++ +    EMK  GV  +   ++  +D F K  
Sbjct: 260 EMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG 319

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  AM  F +M   G+ P+  T+ +L+D   K GR D A  L +EM  +G  P   TY 
Sbjct: 320 LVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 379

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------- 566
           +M++ L ++ +  +   +L  M   G+  N + YTTL+  +  +   + A++        
Sbjct: 380 VMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNK 439

Query: 567 ----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                           C +   D+A +    M   GL+P+ +   ++++A  +  +++EA
Sbjct: 440 GMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEA 499

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            A+L  + ++G +P+VVTY  L+  L +     +  S +
Sbjct: 500 VALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHF 538



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 156/345 (45%), Gaps = 7/345 (2%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E  Y+ L+    ++ +L +A +L      Q L P  +TY  ++    +   + +A N++S
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y+ +I      N  + +L   L  +++   +ELD  L   +I G  K
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERAL--DLLNQMKNKGMELDVSLYGTLIWGLCK 457

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A   L    G GL P T  Y  ++ AL  +G+  EA A+  ++ +SG +P    
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+ G  K G + +A    ++M   G+ P+   Y+ LID +   G    A  ++ EM 
Sbjct: 518 YCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMI 577

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 +  +Y+ ++ GY  +   Q  F +  +M  SG++ D + Y   I  F   N + 
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            A      M+  GI PD   +N LI  + K G  + A  L  EM+
Sbjct: 638 EARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 14/320 (4%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++++  L +  K+ EA  +LS  +R       L Y  LI     N++ E+AL+L+++M+
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   D   Y  +I  L +  K+D   SLL K+     C  +  +  +   ++    KA
Sbjct: 438 NKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG---CG-LRPNTVIYTTIMDALFKA 493

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S+A+  L      G  P   TY A+I  L  +G   EA + F +++E GL P  +AY
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            AL+ G+ K+G L  A  +++EM   G+  D+  Y+ LID Y      + A  +  +M  
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S  + + + Y+  ++G+ +    Q    VL EM  +G+ PD   YN +I  + K   +  
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEE 673

Query: 459 AMAAFDRM---LSEGIEPDT 475
           A +  + M   LS   E DT
Sbjct: 674 ASSLQNEMESVLSSCTEDDT 693



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/446 (21%), Positives = 181/446 (40%), Gaps = 42/446 (9%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKAL 213
           C    + Y+ LI   G+   L E   L    R +      +TYNALI+  ++   +EKA 
Sbjct: 231 CSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAY 290

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +   +M++ G   + + +S  + +  +   +  ++  KL+ ++    +  +      ++ 
Sbjct: 291 SYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM--KLFAQMRVRGMMPNEFTYTSLVD 348

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  KAG    A+  L      GL P   TY  ++  L   G+  EA+ V   ++  G+K 
Sbjct: 349 GTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKA 408

Query: 334 RTKAYNALLKGY------------------------------VKMGYLKD-----AEFVV 358
               Y  L+ G+                              +  G  KD     A+ ++
Sbjct: 409 NELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLL 468

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M   G+ P+   Y+ ++DA   AG+   A  +L ++  S  +PN   Y  ++ G    
Sbjct: 469 HKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKA 528

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G          +M+  G++P+   Y  +ID F K   L+ AM   + M+ +G+  D + +
Sbjct: 529 GSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVY 588

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            +LID + K      A  L  +M E G       Y   I+        ++ + +L  M  
Sbjct: 589 TSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIG 648

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDA 564
            G+ P+   Y  L+  Y + G  ++A
Sbjct: 649 TGITPDKTVYNCLIRKYQKLGNMEEA 674


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 13/372 (3%)

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A   LG    +GL P   T+  ++  L +  + I+A  +F+E+ + G  P    Y  ++K
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K+G+  +A  ++ +ME  G  PD   Y+ +ID+     R   A     EM      P
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   YS IL G+ + G+      + K+M    V P+T  + +++D   K   +  A   F
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M   G+EPD  T++ L+D +    + D A++LF+ M  +G+ P    YNI+IN   + 
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            R  + K LL  M  + L P+ VTY+TL+  + Q+GR              A   F+ M 
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR-----------PQVAQKLFKEMC 413

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           + GL P ++  + L++   +     EAF +L+ M+E+ ++P +  Y  L++ +    K  
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473

Query: 644 KVFSSYLFFNIY 655
              +  LF N++
Sbjct: 474 A--ARELFSNLF 483



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 13/455 (2%)

Query: 132 LLKNLCSSN-SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ--- 187
           L+  LC SN   +  A++ +  + K  L     + +  L++ L    K+ +A  L     
Sbjct: 110 LINCLCHSNRDHVHFAFSALGKMFKLGL-QPTHVTFGTLLNGLCSKAKIIDAVKLFDEIG 168

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +    P  +TY  +I    +      AL L+ KM + G   D + Y+ VI SL +  + +
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            ++    + E+    I  +    + ++ GF   G  ++A        G  + P T T+  
Sbjct: 229 EAMY--FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G  +EA  VFE + E+G++P    Y+AL+ GY     + +A+ +   M   G
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P    Y++LI+ +  + R   A+ +L EM      P++  YS ++ G+   G  Q   
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQ 406

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-- 483
           ++ KEM S G+ PD+  Y++++D   K+  L  A      M    IEP    +N LI   
Sbjct: 407 KLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGM 466

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           C+F  G+ + A ELF  +  +G  P   TY +MI+ L ++    +   +   M   G LP
Sbjct: 467 CNF--GKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           N  TY   +  + ++G   +A+  +E +  +  +A
Sbjct: 525 NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSA 559



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 204/448 (45%), Gaps = 19/448 (4%)

Query: 195 TYNALISA-CARN-DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           T   LI+  C  N D +  A + + KM + G     + +  ++  L    KI  ++  KL
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV--KL 163

Query: 253 YKEIECDKIELDGQLLN--DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           + EI   K+     L+    +I G  K G  + A++ L   +  G  P    Y  VI +L
Sbjct: 164 FDEI--GKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSL 221

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
               R  EA   F E+ + G+ P    Y+++L G+  +G L +A  +  +M    V+P+ 
Sbjct: 222 CKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNT 281

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T+++L+D     G    AR V + M  +  +P+++ YS ++ GY  + +     ++   
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  P    YN++I+   K   L+ A      M    + PDT+T++TL+    + GR
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A++LF+EM   G  P + TY+I+++ L +    ++  RLL  M+   + P++  Y  
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+      G+ + A E            F  +   G++PS +    +I+   ++    EA
Sbjct: 462 LIQGMCNFGKLEAARE-----------LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
             + + M  NG  P+  TY   ++  +R
Sbjct: 511 CEMFRKMVVNGCLPNSCTYNVAIQGFLR 538



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 190/396 (47%), Gaps = 9/396 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQ 187
           + +++K LC    + + A  ++  +++   C    + Y+ +I +L +  +  EA +  S+
Sbjct: 179 YTTIIKGLCKIGHTTN-ALQLLKKMEEKG-CKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236

Query: 188 R--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              Q + P  +TY++++        L +A +L  +M       + + +++++  L +   
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I  +  +++++ +  + +E D    + ++ G+       +A +   +  G G +P    Y
Sbjct: 297 ILEA--RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I     S R  EA+ +  E+ +  L P T  Y+ L++G+ + G  + A+ +  EM  
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+LPD  TYS+L+D     G  + A  +LK M+ S  +P+  IY+ ++ G  + G+ + 
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEA 474

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++   +   G++P    Y VMI    K    + A   F +M+  G  P++ T+N  I 
Sbjct: 475 ARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              + G    A  L EEM  RG+   ++T+ ++++L
Sbjct: 535 GFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 16/323 (4%)

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           + + P +         Y  +  + DA    +++     LP    ++ L+ +      + +
Sbjct: 28  TNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYST 87

Query: 389 ARIVLKEMEVSHAKPNSFIYSRIL--AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
              + K+M++S+ +PN +  + ++    + +R      F  L +M   G++P    +  +
Sbjct: 88  VISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTL 147

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ++       +  A+  FD +   G  P  IT+ T+I    K G    A +L ++M+E+G 
Sbjct: 148 LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGC 207

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P    YN +I+ L +  R  +       M  QG+ PNVVTY++++  +           
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGF----------- 256

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G  ++A + F+ M    + P+ +    L++   ++    EA  V + M ENG++PD 
Sbjct: 257 CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316

Query: 627 VTYTTLMKALI---RVDKFHKVF 646
            TY+ LM       ++D+  K+F
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLF 339


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 223/485 (45%), Gaps = 54/485 (11%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           ++L++ L   GR E L+  +       L+P  +T+  LI  C R  DL +A  +  +MR 
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     I Y+++I+ L   NKI+ +  + +++ +    +  +    N ++ G+ K  +A
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEA--ESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+R      G GL P   T+  +I  L   G    A  +F  + +  + P    YN+L
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +  Y K+G + +A  +  E+ER  V PD  TYS+LI    +  R E A  + ++M     
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
             NS  Y+ ++ G    G+  +  ++  +M  +GVEP+   ++ +ID + K   L  AM 
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMG 448

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            +  M+ + + PD +T+  +ID H K G    A +L+ +M +                  
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD------------------ 490

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
                             G+ PN  T + L+D   + G+  DA+E    L  + +  F+ 
Sbjct: 491 -----------------NGITPNCYTISCLLDGLCKDGKISDALE----LFTEKIE-FQT 528

Query: 582 MRTD----GLKPS---NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            R +    G KPS   ++A  +LI+   +D + ++A  +   M+  GL+PD V Y  +++
Sbjct: 529 PRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLR 588

Query: 635 ALIRV 639
            L +V
Sbjct: 589 GLFQV 593



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/387 (24%), Positives = 165/387 (42%), Gaps = 20/387 (5%)

Query: 267 LLNDVIVGFAKAGDASKAMRF----LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
           LLND++    K+     A +     L   +    +P    Y  +I  L       EA ++
Sbjct: 80  LLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSM 137

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           + ++   G     +A N LL   VK G  +    +  EM  +G+ P   T+  LID    
Sbjct: 138 YHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCR 194

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G    A+ +  EM V    P   +Y+ ++ G     + +    + + M+  GV P+ + 
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYT 254

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN ++D + K      A+  +  ML EG+ PD +T+  LID   K G    A  LF  M 
Sbjct: 255 YNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMI 314

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           +    P    YN +I+   +     +   L   +    + P+V TY+ L+       R  
Sbjct: 315 KFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR-- 372

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                    +++A N F  M  +G+  +++  NSLI+   ++ +  +A  +   M ENG+
Sbjct: 373 ---------TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +P+V+T++TL+    ++         Y
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIY 450



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 57/285 (20%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRL--TPLTYNALISACARNDDLEKALNLMSKMR 220
           YSILI  L    R+E+    F    ++ +    +TYN+LI  C +   ++KAL + S+M 
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   + I +S +I    +   + +++   +Y E+    +  D      +I G  K G 
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAM--GIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477

Query: 281 ASKAMRFLGMAQGVGLSPKTAT-------------------------------------- 302
             +A++        G++P   T                                      
Sbjct: 478 MKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGG 537

Query: 303 ----------YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
                     Y A+I  L   G+  +A  +F +++  GL+P    Y  +L+G  ++ Y+ 
Sbjct: 538 SKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI- 596

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
               + ++M + GV+P+   + +L + Y  +G  +SA+   K++E
Sbjct: 597 -LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLE 640


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 211/455 (46%), Gaps = 15/455 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQK 251
           ++YN  ++A +       A  ++S+M + G   D +  S  +  L RT  +   ++L + 
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +    D +++ G   N +I G+ K  D + A+  +      G++     Y +++    
Sbjct: 176 LVRGRGIDGLDVVGW--NALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           +SG    A  V E +K  G++P    Y AL+  Y K   + +A  +   M RSGVLPD  
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T S L+D     G++  A  + +EM+     PN   Y  ++           +  +L EM
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S GV  D   Y  ++D  GK   +  A        S+ I P+ +T+  L+D H + G  
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D AE++  +M+E+   P   T++ +IN L ++         +  M+  G+ PNVVTY TL
Sbjct: 414 DGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTL 473

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D     G F       +G  + A++ +R M  +G++ +N  ++SL+N   ++     A 
Sbjct: 474 ID-----GFFK-----FQG-QEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A+ + M E GL  D V YTTLM  L +       F
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 216/442 (48%), Gaps = 13/442 (2%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           ++L++   +N ++E A  L   M + G   D +NY+ ++  L +T  + ++   K+ +E+
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF--KVGQEL 563

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               +  D  + N  I      G  S+A  FL   +  GL P  ATY  +I A    G+T
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKT 623

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A  + +E+K + +KP    Y  L+ G ++ G +K A+F+++EM  +G  P   T+  +
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           + A + + R +    + + M  +    +  +Y+ ++      G  +    VL EM + G+
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PDT  +N +I    K + L +A A + +ML +G+ P+  T+NTL+      GR   A+ 
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +  +M++ G  P   TY+I++    ++    +  RL   M ++G +P   TY +L+  + 
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFA 863

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++           G+ +QA   F  M+  G+  ++   + L+N + + +   E   +L+ 
Sbjct: 864 KA-----------GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKD 912

Query: 617 MKENGLKPDVVTYTTLMKALIR 638
           MKE G KP   T +++ +A  R
Sbjct: 913 MKELGFKPSKGTISSMSRAFSR 934



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 211/477 (44%), Gaps = 20/477 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    + + + EAF L +   R  + P  +T +AL+    R+    +A  L  +M 
Sbjct: 260 YTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMD 319

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + Y  +I SL +  +   SL   L  E+    + +D  +   ++    K G 
Sbjct: 320 KIGVAPNHVTYCTLIDSLAKARRGSESL--GLLGEMVSRGVVMDLVMYTALMDRLGKEGK 377

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L  AQ   ++P   TY  ++ A   +G    AE V  +++E  + P    +++
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSS 437

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G VK G L  A   + +M+ SG+ P+  TY  LID +      E+A  V ++M    
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N+F+   ++ G R  G  +    + K+M   G+  D   Y  ++D   K   +  A 
Sbjct: 498 VEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                ++ + + PD + +N  I+C    G++  A+   +EM+  G  P   TYN MI   
Sbjct: 558 KVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-GLSDQAVNAF 579
             + +     +LL  M+   + PN++TYTTLV            +  LE G+  +A    
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPNLITYTTLV------------VGLLEAGVVKKAKFLL 665

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             M + G  P++L    ++ A    +R      + + M   GL  D+  Y TL+  L
Sbjct: 666 NEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVL 722



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/511 (22%), Positives = 228/511 (44%), Gaps = 20/511 (3%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LL 185
           +L+  LC  +     AYA+   + K  +  ++ + Y  LI +L ++ +  E+      ++
Sbjct: 297 ALVDGLCR-DGQFSEAYALFREMDKIGVAPNH-VTYCTLIDSLAKARRGSESLGLLGEMV 354

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S+   +  + Y AL+    +   +E+A +++   + D    +F+ Y++++ +  R   ID
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +  +++  ++E   +  +    + +I G  K G   KA  ++   +  G++P   TY  
Sbjct: 415 GA--EQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I           A  V+ ++   G++      ++L+ G  K G ++ AE +  +M+  G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +L D   Y+ L+D     G   +A  V +E+   +  P++ +Y+  +      G++    
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
             LKEM+++G+EPD   YN MI    +      A+     M    I+P+ IT+ TL+   
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G   +A+ L  EM   G+ P + T+  ++       R + +  +   M   GL  ++
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
             Y TLV +            C  G++  A      M T G+ P  +  N+LI    +  
Sbjct: 713 TVYNTLVHVL-----------CCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
               AFA+   M   GL P++ T+ TL+  L
Sbjct: 762 HLDNAFAIYAQMLHQGLSPNIATFNTLLGGL 792



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 208/444 (46%), Gaps = 8/444 (1%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---Q 189
           L N    N +I+ A A+   + +  L   + + Y+ L+  L ++  +  AF + Q    +
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDH-VNYTTLMDGLFKTGNMPAAFKVGQELMEK 566

Query: 190 RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
            L+P  + YN  I+         +A + + +MR  G   D   Y+ +I +  R  K   +
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           L  KL KE++ + I+ +      ++VG  +AG   KA   L      G +P + T+  V+
Sbjct: 627 L--KLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVL 684

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            A S S R      + E +  +GL      YN L+      G  ++A  V+ EM   G+ 
Sbjct: 685 QACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIA 744

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD  T++ LI  +  +   ++A  +  +M      PN   ++ +L G    G       V
Sbjct: 745 PDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 804

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L +MK  G+EP+   Y++++  + K +    A+  +  M+S+G  P   T+N+L+    K
Sbjct: 805 LSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAK 864

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G  ++A+ELF EM+ RG    ++TY+I++N   +     +V+ LL +M+  G  P+  T
Sbjct: 865 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGT 924

Query: 548 YTTLVDIYGQSGRFDDAIECLEGL 571
            +++   + + G   +A   L+ L
Sbjct: 925 ISSMSRAFSRPGMTGEARRLLKTL 948



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 50/245 (20%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+  LA   ++G  +    VL EM   GV  D    +  +    +   +  A AA   ML
Sbjct: 118 YNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEA-AALAEML 176

Query: 468 --SEGIEP-DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
               GI+  D + WN LID +  C   D A  L   + ER                    
Sbjct: 177 VRGRGIDGLDVVGWNALIDGY--CKVQDMAAAL--AVVER-------------------- 212

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
                      M  QG+  +VV Y +LV  +  SG  D A+E +E            M+ 
Sbjct: 213 -----------MTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE-----------RMKA 250

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           DG++P+ +   +LI  + + +   EAF++ + M  +G+ PDVVT + L+  L R  +F +
Sbjct: 251 DGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE 310

Query: 645 VFSSY 649
            ++ +
Sbjct: 311 AYALF 315


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 240/554 (43%), Gaps = 28/554 (5%)

Query: 104 ASSPSSLNRVEFKLAESYRAVP---AP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           ASSP++ +    +L +  RA     AP   L   L++NLC    + D A  + +  +   
Sbjct: 83  ASSPATTSPRAARLVD--RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 140

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
               +   Y+ L+    R  +L  A  L     + P   TY  +I        + +AL+L
Sbjct: 141 AVDVFA--YNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSL 198

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +  M   G     + Y+++++++ ++     ++  ++  E+       +    N +I G 
Sbjct: 199 LDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM--EVLDEMRAKGCTPNIVTYNVIINGM 256

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            + G    A  FL      G  P T +Y  V+  L  + R  + E +F E+ E    P  
Sbjct: 257 CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNE 316

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             ++ L++ + + G ++ A  V+ +M   G   +    +++I+     GR + A   L  
Sbjct: 317 VTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNN 376

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M      P++  Y+ +L G      W+   ++LKEM      P+   +N  I    +   
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A    ++M   G E + +T+N L++     GR D A ELF  M  +   P T TY  
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 493

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           ++  L   ER +    LL  M  +   PNVVT+  LV  + Q G  D+AIE +E + +  
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH- 552

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                     G  P+ +  N+L++   +D    EA  +L  +  NG+ PD+VTY++++  
Sbjct: 553 ----------GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602

Query: 636 LIRVDKFHKVFSSY 649
           L R D+  +    +
Sbjct: 603 LSREDRVEEAIKMF 616



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 226/491 (46%), Gaps = 23/491 (4%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLE 210
           H  C    + Y++L+ A+ +S    +A  +    R    TP  +TYN +I+   R   ++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A   ++++   G+  D ++Y+ V++ L    + +   +++L+ E+  +K  +  ++  D
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED--VEELFAEMM-EKNCMPNEVTFD 320

Query: 271 VIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++V F  + G   +A++ L    G G +  T     VI  +   GR  +A      +   
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P T +Y  +LKG  +    +DA+ ++ EM R    P+E T++  I      G  E A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +++++M     + N   Y+ ++ G+  +G      ++   M     +P+T  Y  ++  
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTG 497

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 L  A      ML +   P+ +T+N L+    + G  D A EL E+M E G  P 
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +++ + +    E+   LL  + + G+ P++VTY++++ +  +  R ++AI+   
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK--- 614

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    F +++  G++P  +  N ++ A  +      A     YM  NG  P+ +TY
Sbjct: 615 --------MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 666

Query: 630 TTLMKALIRVD 640
            TL++ L   D
Sbjct: 667 ITLIEGLANED 677



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 174/419 (41%), Gaps = 12/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + ++LK LC++    D+       ++K+  C   E+ + +L+    R   +  A  + ++
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                        N +I+   +   ++ A   ++ M   G   D I+Y+ V++ L R  +
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +  ++L KE+       +    N  I    + G   +A   +      G      TY
Sbjct: 402 WEDA--KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A++      GR   A  +F  +     KP T  Y  LL G      L  A  +++EM +
Sbjct: 460 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               P+  T+++L+  +   G  + A  ++++M      PN   Y+ +L G       + 
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  + S+GV PD   Y+ +I    + + +  A+  F  +   G+ P  + +N ++ 
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 636

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    D A + F  M   G  P   TY  +I  L  ++  ++ + LL  + ++G+L
Sbjct: 637 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 223/458 (48%), Gaps = 18/458 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  +IS   +   LE+A  L  +M  +G+  D + YS ++  L +  ++  +  Q+L 
Sbjct: 239 ITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA--QELL 296

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV--GLSPKTATYAAVITALS 311
           +E++   ++ +      +I    KAG A +A  F   +Q V  G++        ++  L 
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEA--FACQSQLVVRGMTLDLVMCTTLVDGLF 354

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            S +  EAE +F  L +  L P +  Y AL+ GY K+G ++  E ++ EME   + P+  
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TYS +I+ Y   G  + A  V+K+M   +  PN+++Y+ ++ GY   G+ +    +  EM
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K SG++ +   ++V+++   +   +  A      + S G+  D + + +L+D  FK G+ 
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  + EEM E+       TYN++IN L E  ++E  K +   M   GL PN  TY  +
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIM 593

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y + G  D+A+E            +  M++  + PS++  N+L+    E     +A 
Sbjct: 594 IKAYCKQGELDNALE-----------LWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAM 642

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            VL  M   G+ P++V +  L+ A  +  K + V   +
Sbjct: 643 NVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMH 680



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 230/519 (44%), Gaps = 60/519 (11%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           H L  +  LYE  +++      P  +TY+++++   ++  L +A  L+ +M++ G   + 
Sbjct: 252 HGLEEARALYEEMIING---FLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNH 308

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y+ +I SL +      +   +   ++    + LD  +   ++ G  K+    +A    
Sbjct: 309 VAYTTLIDSLFKAGSAWEAFACQ--SQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMF 366

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                + L P + TY A+I      G     E++ +E++E  + P    Y++++ GY K 
Sbjct: 367 RALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKK 426

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI- 407
           G L +A  V+ +M    ++P+ + Y++LID Y  AG+ E A  +  EM++S  K N+ + 
Sbjct: 427 GILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLF 486

Query: 408 ----------------------------------YSRILAGYRDRGEWQRTFQVLKEMKS 433
                                             Y+ ++ G+   G+      +++EM  
Sbjct: 487 DVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTE 546

Query: 434 SGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
             +  D   YNV+I+     GKY     A + +  M+  G+ P+  T+N +I  + K G 
Sbjct: 547 KSIPFDVVTYNVLINGLLEHGKY----EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGE 602

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A EL+ EM+     P + T N ++  L E    E    +L  M   G+ PN+V +  
Sbjct: 603 LDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRV 662

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L++   +SG+ +  ++  E L D            GLK +  A N+LI  F   +   +A
Sbjct: 663 LLNASSKSGKANAVLQMHEQLVDM-----------GLKINQEAYNNLIVVFCRLRMTKKA 711

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +VL+YM  +G   D VTY  L++         K  ++Y
Sbjct: 712 TSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATY 750



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 203/453 (44%), Gaps = 43/453 (9%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + YS +I+   +   L EA  + ++   Q + P    Y  LI    +    E A +L ++
Sbjct: 414 ITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNE 473

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   + + + +++ +L R  ++D +  ++L K++    + LD      ++ GF KA
Sbjct: 474 MKLSGLKVNNVLFDVLVNNLKRGKRMDEA--EELLKDVTSRGLLLDHVNYTSLMDGFFKA 531

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A+  +       +     TY  +I  L   G+  EA++V+  + E GL P    Y
Sbjct: 532 GKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATY 590

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++K Y K G L +A  + +EM+   ++P   T + L+   + AG  E A  VL EM V
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQ-------------------------------- 426
               PN  I+  +L      G+     Q                                
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 427 ---VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              VLK M   G   DT  YN +I  + + + +  A+A + +ML+EG+ P+ +T+N L+ 
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G     +ELF++M+E G  P  +TY+ +I+  G+    ++  RL   M AQG +P
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP 830

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
              TY  L+  + + G+ D A E L  +  + V
Sbjct: 831 KTSTYNVLISDFAKVGKMDQARELLNEMQVRGV 863



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 17/395 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI+    +   E A ++ S M + G   +   Y+++I++  +  ++D++L  +L+
Sbjct: 554 VTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL--ELW 610

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++  KI       N ++VG ++AG+  KAM  L     +G+ P    +  ++ A S S
Sbjct: 611 NEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKS 670

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+      + E+L + GLK   +AYN L+  + ++   K A  V+  M R G + D  TY
Sbjct: 671 GKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTY 730

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  Y  +   + A     +M      PN   Y+ +L G    G      ++  +MK 
Sbjct: 731 NALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G+ PD   Y+ +I  +GK      ++  +  M+++G  P T T+N LI    K G+ D+
Sbjct: 791 NGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQ 850

Query: 494 AEELFEEMQERGYFPCTTTYNIMI----NL---------LGEQERWEDVKRLLGNMRAQG 540
           A EL  EMQ RG  P ++TY+I+I    NL         L +  R  D K L+  M  +G
Sbjct: 851 ARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR-TDAKNLITEMNDKG 909

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            +P   T   +   + + G+  DA + L+ +   A
Sbjct: 910 FVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHA 944



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 186/461 (40%), Gaps = 80/461 (17%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           +E+D    N VI GF + G  ++A  FL +         T T   ++      G     E
Sbjct: 73  VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGE 132

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            + + L   G       +N L+ GY K G +  A  +V  M + G+L D  +Y+ LI+ +
Sbjct: 133 RIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGF 192

Query: 381 ANAGRWESARIVLKEMEVSHAKPNS---------------------FIYSRILAGYRDR- 418
              G ++ A+ +L E+  S    +S                       Y+ I++ Y  + 
Sbjct: 193 CKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQH 252

Query: 419 ----------------------------------GEWQRTFQVLKEMKSSGVEPDTHFYN 444
                                             G      ++L+EMK  GV+P+   Y 
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYT 312

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID+  K      A A   +++  G+  D +   TL+D  FK  +   AE++F  + + 
Sbjct: 313 TLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKL 372

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P + TY  +I+   +    E V+ LL  M  + + PNV+TY+++++ Y + G  D+A
Sbjct: 373 NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA 432

Query: 565 IECLEGLSDQ------------------------AVNAFRVMRTDGLKPSNLALNSLINA 600
           I  ++ + DQ                        A + +  M+  GLK +N+  + L+N 
Sbjct: 433 INVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNN 492

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               +R  EA  +L+ +   GL  D V YT+LM    +  K
Sbjct: 493 LKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGK 533



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/486 (21%), Positives = 211/486 (43%), Gaps = 19/486 (3%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI     +G  E++       + + + P  +TY+++I+   +   L++A+N+M K
Sbjct: 379 ITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKK 438

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M       +   Y+++I    +  K    +   LY E++   ++++  L + ++    + 
Sbjct: 439 MLDQNIIPNAYVYAILIDGYCKAGK--QEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRG 496

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A   L      GL      Y +++     +G+   A  + EE+ E  +      Y
Sbjct: 497 KRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTY 556

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G ++ G   +A+ V S M   G+ P++ TY+++I AY   G  ++A  +  EM+ 
Sbjct: 557 NVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+S   + ++ G  + GE ++   VL EM   G+ P+   + V+++   K    + 
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +   ++++  G++ +   +N LI    +     +A  + + M   G+   T TYN +I 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              E    +        M  +G+ PN+VTY  L+     +G   +  E            
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDE-----------L 784

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M+ +GL P     ++LI+ +G+     E+  +   M   G  P   TY  L+    +
Sbjct: 785 FDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAK 844

Query: 639 VDKFHK 644
           V K  +
Sbjct: 845 VGKMDQ 850



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 138/343 (40%), Gaps = 70/343 (20%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M +  ++P    ++ LI  +   G       +  EM  S   PN + ++ ++  +   G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA------------------- 461
                 +L+ +    VE DT  YN +I  F ++  ++ A                     
Sbjct: 61  LILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 462 ----------------AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
                             D ++S G   D I +NTLID + K G    A +L E M++ G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQG--------------------LLPN 544
                 +YN +IN   ++  ++  K LL  +  ++G                    L  +
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           ++TYTT++  Y           C +   ++A   +  M  +G  P  +  +S++N   +D
Sbjct: 238 LITYTTIISTY-----------CKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKD 286

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            R +EA  +L+ MK+ G+ P+ V YTTL+ +L +     + F+
Sbjct: 287 GRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFA 329


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 27/476 (5%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            T N LI  C     +     +     + G+  D +  + +++ +   N I  ++  +L+ 
Sbjct: 983  TLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAV--QLFD 1040

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            E+    +  D +    +I G  KA     A++     +G        TY  +I AL   G
Sbjct: 1041 EMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDG 1099

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             T EA  +F E+  +G+ P    Y++L+ G  + G LK+A     EME  G+  D +TY+
Sbjct: 1100 MTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYN 1159

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             LI   + AG W+     L  M      P++F ++ ++ G    G+     Q+L+ M+  
Sbjct: 1160 SLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK 1219

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            G EPD   YN +++       L  A   F+ +   GI+ +  ++N LI+ + K  + D A
Sbjct: 1220 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 1279

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
               FEEM+ +G  P T TYN +I  L +  R    ++L   M+  G    + TY  L+D 
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339

Query: 555  YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
              ++G  ++A++                        C  G  ++A   F  +  +GL+P 
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 1399

Query: 591  NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             +A N LIN        +EA  +L  M+E G  PD +T+  +++ L++ ++ H+  
Sbjct: 1400 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 206/446 (46%), Gaps = 12/446 (2%)

Query: 166  YSILIHALGRSEKLYEAFLLSQRQRLT----PLTYNALISACARNDDLEKALNLMSKMRQ 221
            Y ILI+ L ++ K   A  L ++ +        TY  +I A  ++    +AL++ S+M  
Sbjct: 1054 YGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIG 1113

Query: 222  DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
             G   D + YS ++  L R  ++  +L  + +KE+E   I  D    N +I G ++AG  
Sbjct: 1114 AGILPDVVVYSSLMDGLCRFGRLKEAL--EFFKEMEGRGISADVYTYNSLIHGLSRAGLW 1171

Query: 282  SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             +   FL +    G SP   T+  +I  L   G+  EA+ + E ++  G +P    YN L
Sbjct: 1172 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL 1231

Query: 342  LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
            + G   +G L+DA  +   +   G+  +  +Y++LI+ Y    + + A    +EM     
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291

Query: 402  KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            KP++  Y+ ++      G  +   ++  EM++ G       Y V++D   K   L  AM 
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351

Query: 462  AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             F  +     +P+   ++ L+D   + G+ + A + F+E+ + G  P T  YNI+IN L 
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411

Query: 522  EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------SDQA 575
             +    +  +LL  M  +G LP+ +T+  ++    +     +AI+ LE +       D+A
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471

Query: 576  VNAFRVMRTDGLKPSNLALNSLINAF 601
            V +  +         + AL SL NA 
Sbjct: 1472 VTSMLLCLASFDPQWHAALVSLPNAL 1497



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 149/375 (39%), Gaps = 61/375 (16%)

Query: 333  PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
            P T  +N LL    K+GY      +  ++   G+ PD +T ++LI    +         V
Sbjct: 944  PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003

Query: 393  LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
                     +P++   + ++ G           Q+  EM   G+  D   Y ++I+   K
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063

Query: 453  Y---------------NC-------------------LHHAMAAFDRMLSEGIEPDTITW 478
                            NC                      A+  F  M+  GI PD + +
Sbjct: 1064 ARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123

Query: 479  NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            ++L+D   + GR   A E F+EM+ RG      TYN +I+ L     W++V   L  M  
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 539  QGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQ 574
            +G  P+  T+T L+D   + G+  +A +                        CL G  + 
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243

Query: 575  AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            A   F  +   G+K +  + N LIN + +DQ+  EAF   + M+  GLKP  VTY TL+ 
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303

Query: 635  ALI---RVDKFHKVF 646
            AL    RV    K+F
Sbjct: 1304 ALCQSGRVRTAQKLF 1318



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 61/311 (19%)

Query: 399  SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
            S   P +  ++ +LA     G +   F + +++   G++PD +  N++I        +  
Sbjct: 940  SEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGC 999

Query: 459  AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                F   L  G EPD +T  TL+   +       A +LF+EM ++G      TY I+IN
Sbjct: 1000 GFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILIN 1059

Query: 519  LLGEQER-------WEDVK---------------------------RLLGNMRAQGLLPN 544
             L +  +        E +K                            +   M   G+LP+
Sbjct: 1060 GLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPD 1119

Query: 545  VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FR 580
            VV Y++L+D   + GR  +A+E  + +  + ++A                          
Sbjct: 1120 VVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN 1179

Query: 581  VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            +M   G  P       LI+   ++ +  EA  +L+ M+  G +PD++TY TLM  L  V 
Sbjct: 1180 LMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVG 1239

Query: 641  KFH---KVFSS 648
            +     K+F S
Sbjct: 1240 QLEDATKLFES 1250



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 23/217 (10%)

Query: 456  LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
            L+ A+  FDR L     P T T+N L+    K G Y     ++ ++ + G  P   T NI
Sbjct: 927  LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986

Query: 516  MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            +I+             + G    +G  P+ VT TTLV          DA++  + ++ + 
Sbjct: 987  LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046

Query: 576  -----------VNAFRVMRTDGL------------KPSNLALNSLINAFGEDQRDAEAFA 612
                       +N     R  GL            K        +I+A  +D    EA  
Sbjct: 1047 LLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALD 1106

Query: 613  VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +   M   G+ PDVV Y++LM  L R  +  +    +
Sbjct: 1107 MFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 220/455 (48%), Gaps = 14/455 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TY  LI+A  +   +E++ +L  KM  +G   D +  S ++    R  K+  + +  
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-- 377

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L++E+    ++ +      +I    K+G   +A          G+S    T   V+  L 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G+T EAE VFE + +  L P    Y+ALL GY K+G ++ AE V+ +ME+  V P+  
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S +I+ YA  G    A  VL+EM   +  PN+ +Y+ ++ GY   GE        KEM
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           KS  +E     ++++++   +   +  A +    M S+GI+PD + + +LID +FK G  
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  + +EM+E+        YN +I  L    ++ D + +   M   GL P+ +TY T+
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTI 676

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++ Y           C++G ++ A++    M++ G+ P+ +  N LI    +     +A 
Sbjct: 677 INTY-----------CIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 725

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + L  M      P  +T+  L+KA  R +K  K+ 
Sbjct: 726 SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 760



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 179/377 (47%), Gaps = 23/377 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T ++++      G+  EA  +F E+ E GL P   +Y  ++    K G + +A
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S+M   G+  D  T + ++D     G+ + A  V + +   +  PN   YS +L G
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y   G+ +    VL++M+   V P+   ++ +I+ + K   L  A+     M+   + P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           TI +  LID +FK G  D A++  +EM+ R        ++I++N L    R ++ + L+ 
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ-------AVNAF-----RVM 582
           +M ++G+ P++V Y +L+D Y + G    A+  ++ + ++       A NA      R+ 
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 650

Query: 583 RTD-----------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           + D           GL P  +  N++IN +    +  +A  +L  MK  G+ P+ VTY  
Sbjct: 651 KYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNI 710

Query: 632 LMKALIRVDKFHKVFSS 648
           L+  L +     K  S+
Sbjct: 711 LIGGLCKTGAVEKAESA 727



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 226/511 (44%), Gaps = 58/511 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS L+    +  K+  A L+ Q+   + + P  +T++++I+  A+   L KA++++ +M 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     + I Y+++I    +  + D +      KE++  ++E    + + ++    + G 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVA--DDFCKEMKSRRLEESNVIFDILLNNLKRVGR 581

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +      G+ P    YA++I      G  + A ++ +E+KE  ++    AYNA
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641

Query: 341 LLKGYVKMG-----YL-----------------------------KDAEFVVSEMERSGV 366
           L+KG +++G     Y+                             +DA  +++EM+  G+
Sbjct: 642 LIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           +P+  TY++LI      G  E A   L EM V    P    +  ++  Y    +  +  Q
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + +++ +SG+E     YN +I  F +      A    D M+  GI  D +T+N LI  + 
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 821

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE----QERWEDVKRLLGNMRAQGLL 542
                ++A + + +M   G  P  TTYN ++  L      +E  E+ ++L+  M  +GL+
Sbjct: 822 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 881

Query: 543 PNVVTYTTLVDIYGQSG-RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           PN  TY  LV  YG+ G R    I  +E            M T G  P+    N LI+ +
Sbjct: 882 PNAATYDILVSGYGRVGNRKKTIILHIE------------MITKGFVPTLKTYNVLISDY 929

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +  +  EA  +L  +   G  P+  TY  L
Sbjct: 930 AKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/568 (21%), Positives = 246/568 (43%), Gaps = 55/568 (9%)

Query: 124 VPA-PLWHSLLKNLCSSN--SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           VP  P W++LL    +S   S + L Y+ + +       +S     ++L+H+L +   L 
Sbjct: 91  VPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSV----NVLVHSLCKVGDLD 146

Query: 181 EAFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
            A    +   +  +   TYN +I    +   +++   L+S+M + G   D I  +++++ 
Sbjct: 147 LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKG 206

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             R   +  +    +Y  ++   +  D   LN +I G+ +AG  S+A   +  +    + 
Sbjct: 207 YCRIGLVQYAEWV-MYNLVD-GGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVK 264

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEEL-------------------KESGLKPRTKAY 338
               TY  ++ A   +G    AE++F E+                   +   L+P    Y
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+  Y K   ++++  +  +M  +G++PD  T S ++  +   G+   A ++ +EM  
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ I+      G     F +  +M   G+  D      ++D   K      
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ +L   + P+ +T++ L+D + K G+ + AE + ++M++    P   T++ +IN
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-CLE-------- 569
              ++        +L  M  + ++PN + Y  L+D Y ++G  D A + C E        
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564

Query: 570 ---------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                          G  D+A +    M + G+ P  +   SLI+ + ++     A +++
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 624

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
           Q MKE  ++ DVV Y  L+K L+R+ K+
Sbjct: 625 QEMKEKNIRFDVVAYNALIKGLLRLGKY 652



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 207/473 (43%), Gaps = 20/473 (4%)

Query: 173 LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           +G++++  E F    +  L P  +TY+AL+    +   +E A  ++ KM ++    + I 
Sbjct: 439 VGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVIT 498

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           +S +I    +   +  ++   + +E+    +  +  +   +I G+ KAG+   A  F   
Sbjct: 499 FSSIINGYAKKGMLSKAV--DVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +   L      +  ++  L   GR  EA ++  ++   G+ P    Y +L+ GY K G 
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
              A  +V EM+   +  D   Y+ LI      G+++   +  + +E+  A P+   Y+ 
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLA-PDCITYNT 675

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I+  Y  +G+ +    +L EMKS G+ P+   YN++I    K   +  A +A D ML   
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             P  IT   L+  + +  + D+  ++ E++   G     T YN +I +          K
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 795

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            +L  M  +G+  ++VTY  L+  Y           C     ++A+  +  M  DG+ P+
Sbjct: 796 VVLDEMVKRGISADLVTYNALIRGY-----------CTGSHVEKALKTYSQMFVDGIAPN 844

Query: 591 ----NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
               N  L  L NA   ++   E   ++  M E GL P+  TY  L+    RV
Sbjct: 845 ITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 897



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 164/382 (42%), Gaps = 48/382 (12%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A A F  ++  GL P    +N LL  +   G +   + + S+M   GV+PD  + ++L+ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           +    G  + A   L+  +V     ++  Y+ ++ G+  +G   + F +L EM   G+  
Sbjct: 138 SLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D+   N+++  + +   + +A      ++  G+  D I  NTLID + + G   +A EL 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELI 255

Query: 499 EEMQERGYFPCTTTYNIMINLL---GEQER-----------WEDVKRLLGN-----MRAQ 539
           E            TYN ++      G+  R           W+D  RL  N        +
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 540 GLLPNVVTYTTLVDIYGQ----------------SGRFDDAIE--------CLEGLSDQA 575
            L P +VTYTTL+  Y +                +G   D +         C  G   +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              FR M   GL P++++  ++IN+  +  R  EAF +   M   G+  D+VT TT+M  
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 636 LIRVDKF---HKVFSSYLFFNI 654
           L +V K     +VF + L  N+
Sbjct: 436 LFKVGKTKEAEEVFETILKLNL 457



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 17/262 (6%)

Query: 166 YSILIHAL---GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI  L   G  EK   A   +L      TP+T+  L+ A +R++  +K L +  K+ 
Sbjct: 708 YNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 767

Query: 221 QDGYHCDFINYSLVIQSLTR---TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             G       Y+ +I    R   T K    L + + + I  D +       N +I G+  
Sbjct: 768 ASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTY-----NALIRGYCT 822

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG----RTIEAEAVFEELKESGLKP 333
                KA++        G++P   TY  ++  LSN+G       E E +  E+ E GL P
Sbjct: 823 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 882

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y+ L+ GY ++G  K    +  EM   G +P   TY++LI  YA +G+   AR +L
Sbjct: 883 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 942

Query: 394 KEMEVSHAKPNSFIYSRILAGY 415
            ++      PNSF Y  +  G+
Sbjct: 943 NDLLTKGRIPNSFTYDILTCGW 964



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 166 YSILIHALGRSEK------LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +  L+ A  RSEK      ++E  + S  + L+   YN LI+   R     KA  ++ +M
Sbjct: 743 HKFLVKAYSRSEKADKILQIHEKLVASGLE-LSLTVYNTLITVFCRLGMTRKAKVVLDEM 801

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D + Y+ +I+     + ++ +L  K Y ++  D I  +    N ++ G + AG
Sbjct: 802 VKRGISADLVTYNALIRGYCTGSHVEKAL--KTYSQMFVDGIAPNITTYNTLLGGLSNAG 859

Query: 280 ----DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
                  +  + +      GL P  ATY  +++     G   +   +  E+   G  P  
Sbjct: 860 LMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTL 919

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           K YN L+  Y K G + +A  +++++   G +P+  TY +L   + N
Sbjct: 920 KTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLN 966



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 6/233 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYS---YELLYSILIH-ALGRSEKL 179
           VP P+ H  L    S +   D    +   L    L  S   Y  L ++     + R  K+
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               ++ +      +TYNALI        +EKAL   S+M  DG   +   Y+ ++  L+
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLS 856

Query: 240 RTN--KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
                +      +KL  E+    +  +    + ++ G+ + G+  K +         G  
Sbjct: 857 NAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV 916

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           P   TY  +I+  + SG+ IEA  +  +L   G  P +  Y+ L  G++ + Y
Sbjct: 917 PTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSY 969



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 33/246 (13%)

Query: 423 RTFQVLKEMKSSGVEP-DTH----FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           RTF       S  + P  TH    F+  +I  +  ++    A A F  M + G+ P    
Sbjct: 37  RTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPF 96

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           WNTL+      G   + + ++ +M   G  P   + N++++ L    +  D+   LG +R
Sbjct: 97  WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLC---KVGDLDLALGYLR 153

Query: 538 AQGLLP-NVVTYTTLVDIYGQSGRFD----------------DAIE--------CLEGLS 572
              ++  + VTY T++  + Q G  D                D+I         C  GL 
Sbjct: 154 NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLV 213

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
             A      +   G+    + LN+LI+ + E    ++A  +++    + +K D+VTY TL
Sbjct: 214 QYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTL 273

Query: 633 MKALIR 638
           +KA  +
Sbjct: 274 LKAFCK 279


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 236/526 (44%), Gaps = 48/526 (9%)

Query: 166 YSILIHALGRSEK-----LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALN-LMSKM 219
           YSIL+    R+ +     +    +L    ++  +T + L+      +  E+A+N L+ +M
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK---LYKEIECDKIELDGQLL--NDVIVG 274
            + G   +  +YS++++ L      D+S+ Q+   L++ +  +       ++  N VI G
Sbjct: 220 SELGCVPNVFSYSIILKGLC-----DNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F K G+  KA          G+ P   TY  +I AL  +    +AE V  ++  +G +P 
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
           T  YN ++ GY  +G LK+A  +  +M+  G++P+    +  + +    GR + A  +  
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M     KP+   Y  +L GY   G +     +   MKS+G+  D   +N++I  + K  
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  AM  F  M  +G+ PD +T++T+I    + GR   A E F +M  RG  P T  Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGL-LPNVVTYTTLVDIYGQSGRFDDAIE------- 566
            +I            K L+  M  +G+  P++V + ++++   + GR  DA +       
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 567 -----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            CL G  D+A      M   G++   +  ++L++ + ++ R  +
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRV-------DKFHKVFSS 648
              + + M+  G+KP+ VTY  ++  L R         KFH++  S
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/520 (23%), Positives = 228/520 (43%), Gaps = 54/520 (10%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +IH    LGR ++  + F   + + L P  +  N+ +++  ++   ++A  +   M 
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D ++Y  ++            +   L+  ++ + I  D ++ N +I  +AK G 
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMI--GLFNSMKSNGIAADCRVFNILIHAYAKRGM 455

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AM      Q  G+SP   TY+ VI+A S  GR  +A   F ++   G++P T  Y++
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +++G+   G L  A+ +VSEM   G+  PD   ++ +I++    GR   A  +   +   
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+   ++ ++ GY   G+  + F++L  M+  GVE D   Y+ ++D + K   ++  
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDG 635

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY------ 513
           +  F  M  +G++P+T+T+  ++   F+ GR   A + F EM E G     + Y      
Sbjct: 636 LTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGG 695

Query: 514 -----------------------------NIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                                        N MIN + + +R E+ K L   + A GLLPN
Sbjct: 696 LCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPN 755

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             TY  ++    + G  +D           A N F  M   G+ P +  LN +I    E 
Sbjct: 756 ESTYGVMIINLLKDGAVED-----------ANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              A+A   L  +    +  +  T + ++    R  K+H+
Sbjct: 805 GEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHE 844



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 166/410 (40%), Gaps = 44/410 (10%)

Query: 165 LYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +++ILIHA  +   + +A L+    Q+Q ++P  +TY+ +ISA +R   L  A+   ++M
Sbjct: 442 VFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM 501

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI-ELDGQLLNDVIVGFAKA 278
              G   +   Y  +IQ       +  +  ++L  E+    I   D    N VI    K 
Sbjct: 502 VARGIQPNTAVYHSIIQGFCMHGGLVKA--KELVSEMINKGIPRPDIVFFNSVINSLCKD 559

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A     +   +G  P   T+ ++I      G+  +A  + + ++  G++     Y
Sbjct: 560 GRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTY 619

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + LL GY K G + D   +  EM+R GV P+  TY +++     AGR  +AR    EM  
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679

Query: 399 SHAKPNSFIYSRILAG-------------YRDRGEWQRTFQV------------------ 427
           S       IY  IL G             ++  G     F +                  
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739

Query: 428 ----LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                  + +SG+ P+   Y VMI    K   +  A   F  M   GI P +   N +I 
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIR 799

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW-EDVKRL 532
              + G   +A     ++  +      +T ++M++L   + ++ ED+K L
Sbjct: 800 MLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/335 (19%), Positives = 147/335 (43%), Gaps = 11/335 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA----- 182
           ++HS+++  C     +  A  +VS +    +     + ++ +I++L +  ++ +A     
Sbjct: 512 VYHSIIQGFCMHGGLVK-AKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +    +R   +T+ +LI        ++KA  ++  M   G   D + YS ++    +  
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +I+  L   L++E++   ++ +      ++ G  +AG    A +        G +   + 
Sbjct: 631 RINDGL--TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI 688

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  +    EA  +F++L    +K      N ++    K+   ++A+ + + + 
Sbjct: 689 YGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATIS 748

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            SG+LP+E TY ++I      G  E A  +   ME S   P S + +RI+    ++GE  
Sbjct: 749 ASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIA 808

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKYN 454
           +    L ++    +  +    ++M+  F   GKY+
Sbjct: 809 KAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYH 843


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 197/389 (50%), Gaps = 14/389 (3%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E+D +   + ++   ++G+    + FL      G+  +  ++ AV+  L   G  + A+A
Sbjct: 150 EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 209

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +EL   G KP    YN LL GY+++  +     ++S ME++ V  +  TY++LI+ Y+
Sbjct: 210 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 269

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            + + E A  +  EM     +P+ +IY+ I+      G  +R F +  EM    + P+ +
Sbjct: 270 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 329

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  +I+   K   +  A    + M S+G++ + + +NTL+D + K G  D A  L   M
Sbjct: 330 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 389

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Q++G+     T NI+ +      R E+ KRLL  M  +G+ PNVV+++ L+DIY      
Sbjct: 390 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY------ 443

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C E    +A   F+VM   G  PS +  N+ I  + +  +  EA+ ++  M+E G
Sbjct: 444 -----CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498

Query: 622 LKPDVVTYTTLM---KALIRVDKFHKVFS 647
           L PD  TYT+L+   +A   VD+  ++F+
Sbjct: 499 LMPDTYTYTSLIDGERASGNVDRALELFN 527



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 204/438 (46%), Gaps = 13/438 (2%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
           A  R+ ++E  +  + +M   G      +++ V+  L +  ++  +  + L  E+ C   
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRA--KALMDELVCKGF 219

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           +      N ++ G+ +  D       L + +   +     TY  +I   S S +  EAE 
Sbjct: 220 KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 279

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+E+ + G++P    Y +++    K G +K A  +  EM    ++P+ +TY  LI+   
Sbjct: 280 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 339

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AG  ++A +++ +M+      N  I++ ++ GY  +G      ++   M+  G E D  
Sbjct: 340 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 399

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N++   F + N    A      M   G+ P+ ++++ LID + K   +  A  LF+ M
Sbjct: 400 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 459

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +++G  P   TYN  I    ++ + E+  +L+  M+ +GL+P+  TYT+L+D    SG  
Sbjct: 460 EKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNV 519

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D A+E            F  M   GL  + +    +I+   +D R  EAF +   M + G
Sbjct: 520 DRALE-----------LFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEG 568

Query: 622 LKPDVVTYTTLMKALIRV 639
           + PD   Y++L+ +L +V
Sbjct: 569 IVPDDGIYSSLIASLHKV 586



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 152/312 (48%), Gaps = 11/312 (3%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VF+  ++ G +   ++    L    + G ++     + +M  SG+     +++ ++D   
Sbjct: 140 VFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 199

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    A+ ++ E+     KP+   Y+ +L GY +  +     ++L  M+ + V+ +  
Sbjct: 200 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 259

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y ++I+ + + + +  A   FD ML +GIEPD   + ++I+ + K G   RA  LF+EM
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ER   P   TY  +IN   +    +  + ++ +M+++G+  N V + TL+D Y      
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY------ 373

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C +G+ D+A+    +M+  G +      N + + F    R  EA  +L  M+E G
Sbjct: 374 -----CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 428

Query: 622 LKPDVVTYTTLM 633
           + P+VV+++ L+
Sbjct: 429 VAPNVVSFSILI 440



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 159/346 (45%), Gaps = 8/346 (2%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISAC 203
           ++S ++K+ + Y+    Y++LI    RS K+ EA   F    ++ + P    Y ++I+  
Sbjct: 245 ILSLMEKNVVDYNVTT-YTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 303

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +  ++++A  L  +M +     +   Y  +I    +  ++ ++  + +  +++   +++
Sbjct: 304 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA--EMMVNDMQSKGVDV 361

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +  + N ++ G+ K G   +A+R   + Q  G      T   + +    S R  EA+ + 
Sbjct: 362 NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLL 421

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             ++E G+ P   +++ L+  Y K     +A  +   ME+ G  P   TY+  I+ Y   
Sbjct: 422 LTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 481

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G+ E A  ++ EM+     P+++ Y+ ++ G R  G   R  ++  EM   G+  +   Y
Sbjct: 482 GKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 541

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            V+I    K      A   +D M  EGI PD   +++LI    K G
Sbjct: 542 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 167 SILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           +I+     RS +  EA   LL+  +R + P  ++++ LI    +  +  +A  L   M +
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 461

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     + Y+  I+   +  K++ +   KL  E++   +  D      +I G   +G+ 
Sbjct: 462 KGKAPSVVTYNAFIERYCKKGKMEEAY--KLINEMQERGLMPDTYTYTSLIDGERASGNV 519

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+        +GL+    TY  +I+ LS  GR  EA  +++E+ + G+ P    Y++L
Sbjct: 520 DRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 579

Query: 342 LKGYVKMGYLKDA-EFVVSEME 362
           +    K+G L    E VV  +E
Sbjct: 580 IASLHKVGPLVSGLENVVDRIE 601


>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 246/524 (46%), Gaps = 21/524 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ-- 187
           + ++  L + +S ID A  +   +Q+   C     +Y+ LIHA  R+ +   A  +    
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWR-CKPDADIYNSLIHAHARAGQWRWAINIMDDM 216

Query: 188 -RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
            R  + P   TYN +I+AC    + +KAL L  KM ++G   D + +++V+ +    ++ 
Sbjct: 217 LRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQY 276

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG--MAQGVGLSPKTAT 302
             ++    ++ ++   I  D   LN VI    K G   +A+  L     +     P   T
Sbjct: 277 SKAI--AYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVT 334

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y +++ +    G+  + +AVF+ +   G+KP   +YNALL  Y   G   DA  +   ++
Sbjct: 335 YTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLK 394

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           ++G+ PD  +Y+ L++AY  +G+ E AR   KEM  +  +PN   Y+ ++  Y   G ++
Sbjct: 395 QNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFK 454

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L EM+  G+ PD    + ++   G+   +       +   S GI+ + + +N+ I
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGI 514

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             +   G Y +A EL+  M      P   TYNI+I+ L +  ++ +  +   +M    + 
Sbjct: 515 GSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIP 574

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                Y++L+  Y + G+             +A + F  M+  G  P  L   ++I A+ 
Sbjct: 575 LTKEVYSSLICSYVKQGKL-----------TEAESTFSSMKESGCLPDVLTYTAMIEAYN 623

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +D     A+ + + M+ N ++PD +  ++LM+AL R  +  +V 
Sbjct: 624 DDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVL 667



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 27/370 (7%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +  +I  ++ +G    A  VF  +K +     R   Y  +++ + +   +  A  +  EM
Sbjct: 122 FPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEM 181

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +     PD   Y+ LI A+A AG+W  A  ++ +M  +   P+   Y+ ++      G W
Sbjct: 182 QEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNW 241

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++  ++ K+M  +GV PD   +N+++  F   +    A+A F+ M    I PDT T N +
Sbjct: 242 KKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIV 301

Query: 482 IDCHFKCGRYDRAEELFEEMQER--GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           I C  K G+Y  A EL   M+E+     P   TY  +++      + ED K +   M A+
Sbjct: 302 IHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAE 361

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQA 575
           G+ PN+V+Y  L+  Y   G   DA+   +                        G  ++A
Sbjct: 362 GVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA 421

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             AF+ MR +  +P+ ++ N+LI+A+G      EA ++L  M+++G+ PDVV+ +TL+ A
Sbjct: 422 REAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTA 481

Query: 636 LIRVDKFHKV 645
             R  +  K+
Sbjct: 482 CGRCRQITKI 491



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 174/384 (45%), Gaps = 48/384 (12%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I   +   +  +A  +F E++E   KP    YN+L+  + + G  + A  ++ +M 
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R+ + P   TY+ +I+A   AG W+ A  + K+M  +   P+   ++ +L+ +++  ++ 
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGK---------------------------YNC 455
           +     + MK + + PDT   N++I    K                           Y  
Sbjct: 278 KAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTS 337

Query: 456 LHHAM----------AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           + H+           A FD M++EG++P+ +++N L+  +   G +  A  +F+ +++ G
Sbjct: 338 IMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNG 397

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   +Y  ++N  G   + E  +     MR     PN+V+Y  L+D YG +G F +AI
Sbjct: 398 LRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAI 457

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
             L             M  DG+ P  +++++L+ A G  ++  +   +L+  K  G+K +
Sbjct: 458 SLLHE-----------MEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLN 506

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           +V Y + + + +    + K    Y
Sbjct: 507 IVCYNSGIGSYLNFGDYGKALELY 530



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 185/392 (47%), Gaps = 7/392 (1%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++A GRS   EK  EAF   ++    P  ++YNALI A       ++A++L+ +M 
Sbjct: 405 YTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEME 464

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   D ++ S ++ +  R  +I  + +  + +  +   I+L+    N  I  +   GD
Sbjct: 465 KDGIPPDVVSISTLLTACGRCRQI--TKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGD 522

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+    +     ++P   TY  +I+ L   G+  E+   FE++ +  +    + Y++
Sbjct: 523 YGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSS 582

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  YVK G L +AE   S M+ SG LPD  TY+ +I+AY + G W +A  + KEME + 
Sbjct: 583 LICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNT 642

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P++ I S ++       + +R  Q+++ MK   +  +   Y  +I +         A 
Sbjct: 643 VQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTAS 702

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + + S        T N L+    KCG+ +   +LF +M         +TY +++  L
Sbjct: 703 EIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNL 762

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
               +W     +L  M   G+ P +  Y  ++
Sbjct: 763 LAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/544 (20%), Positives = 230/544 (42%), Gaps = 41/544 (7%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSYE--------LLYSILIHALGRSEKLYEA---FLLSQR 188
           N+ I+   A  +W +   LC            + ++I++ A     +  +A   F + + 
Sbjct: 229 NNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKG 288

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKI 244
             + P   T N +I    ++    +A+ L++ MR+    C  D + Y+ ++ S     K+
Sbjct: 289 ANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKV 348

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +    + ++  +  + ++ +    N ++  +A  G  + A+    + +  GL P   +Y 
Sbjct: 349 EDC--KAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYT 406

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++ A   SG+  +A   F+E++++  +P   +YNAL+  Y   G  K+A  ++ EME+ 
Sbjct: 407 TLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD 466

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD  + S L+ A     +      +L+  +    K N   Y+  +  Y + G++ + 
Sbjct: 467 GIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKA 526

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++   M +S V PD   YN++I    K      ++  F+ M+   I      +++LI  
Sbjct: 527 LELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICS 586

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G+   AE  F  M+E G  P   TY  MI    +   W +   L   M    + P+
Sbjct: 587 YVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPD 646

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA-----FRV-----MRTDGLKPSNL-- 592
            +  ++L++   +  + +  ++ +E + ++ +       F +     M  D    S +  
Sbjct: 647 AIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIE 706

Query: 593 ------------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
                        LN L+   G+  +      +   M  +     V TYT L++ L+ V 
Sbjct: 707 HLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVG 766

Query: 641 KFHK 644
           K+ K
Sbjct: 767 KWRK 770



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/464 (21%), Positives = 194/464 (41%), Gaps = 42/464 (9%)

Query: 154 QKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDD 208
           +K   C    + Y+ ++H+    G+ E     F +   + + P  ++YNAL+ A A    
Sbjct: 323 EKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGM 382

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
              AL +   ++Q+G   D ++Y+ ++ +  R+ + + +  ++ +KE+  +    +    
Sbjct: 383 HADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKA--REAFKEMRKNSCRPNIVSY 440

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  +  AG   +A+  L   +  G+ P   + + ++TA     +  + + + E  K 
Sbjct: 441 NALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKS 500

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+K     YN+ +  Y+  G    A  + + M  S V PD  TY++LI      G++  
Sbjct: 501 RGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAE 560

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           +    ++M          +YS ++  Y  +G+          MK SG  PD   Y  MI+
Sbjct: 561 SLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIE 620

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER---- 504
            +       +A   F  M    ++PD I  ++L++   +  +++R  +L E M+E+    
Sbjct: 621 AYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPL 680

Query: 505 ---GYF----PCTT------------------------TYNIMINLLGEQERWEDVKRLL 533
               YF     C+                         T N ++  LG+  + E + +L 
Sbjct: 681 NQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLF 740

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             M +      V TYT L+      G++   IE L+ + D  V+
Sbjct: 741 YKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVS 784


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 238/528 (45%), Gaps = 30/528 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----L 184
           W+ L+   C +    + A+AV+  +++          +++++H L +S K+  A      
Sbjct: 157 WNVLITGYCLAREP-EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEA 215

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           + +   ++  T++ LI+   +   + +A +L  +   +G   D   Y+ ++  L +  KI
Sbjct: 216 VRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKI 275

Query: 245 DSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             +  L++K+        I     LLN    G  K G   +A+  L      G +P   T
Sbjct: 276 QEAVALMEKITANGCTPTIATYNALLN----GLCKMGRLEEAIDLLRKIVDNGCTPDVVT 331

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y ++I  L    R+ EA  +F+E+   GL   T  Y AL++G ++ G +  A  V   M 
Sbjct: 332 YTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMT 391

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G +PD  T S +ID  + AGR  +A  + K ME     PN  +YS ++ G     +  
Sbjct: 392 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 451

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              ++L +MK +   PDT  YN++ID   K   +  A A FD ML  G +PD  T+N LI
Sbjct: 452 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K G  D A  + ++M    +      Y+ +++ L +  + E    L   M   G +
Sbjct: 512 SGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG-V 565

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            N  T T L+    ++ R            D+AV+ F  +R +G+ P   A NS+I+A  
Sbjct: 566 ANSQTRTRLIFHLCKANRV-----------DEAVSLFNAIRKEGM-PHPYAYNSIISALI 613

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  +  E  AV Q M     KPD VTY  L+  +I  ++  +    YL
Sbjct: 614 KSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYL 660



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 185/434 (42%), Gaps = 63/434 (14%)

Query: 130 HSLLKNLCSSNSSIDLAY--AVVSWLQKH---------------NLCYSYELLYSILIHA 172
           HSL +   ++  +ID+    A+V+WL K+               N C      Y+ L++ 
Sbjct: 244 HSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG 303

Query: 173 LGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L +  +L EA  L ++      TP  +TY +LI    +     +A  L  +M   G   D
Sbjct: 304 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALD 363

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + Y+ +I+ L +T KI  +    +YK +       D   L+ +I G +KAG    A+R 
Sbjct: 364 TVCYTALIRGLLQTGKIPQA--SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
               +  GL+P    Y+A+I  L  + +   A  +  ++K++   P T  YN L+ G  K
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G ++ A     EM  +G  PD +TY++LI     AG  ++A  VL +M  S      F+
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FV 536

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVE------------------------------ 437
           YS ++ G    G+ +    +  EM+ SGV                               
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596

Query: 438 ---PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              P  + YN +I    K   ++   A +  M +   +PD +T+N L++      R DRA
Sbjct: 597 EGMPHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRA 655

Query: 495 EELFEEMQERGYFP 508
              + EM  RGY P
Sbjct: 656 HYYYLEMTGRGYVP 669



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 29/399 (7%)

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L +L +EI  D +    Q L D  + + +      + RF       G      T  A++ 
Sbjct: 76  LDRLRREISTDAVVKIFQCLKDADLAW-ELFQCLSSPRF-------GFQHSVHTGNALLD 127

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVL 367
             + + R  EA  + +    +  +P  + +N L+ GY      ++A  V+ EME   GV 
Sbjct: 128 VFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVA 187

Query: 368 PDEHTYSLLIDAYANAGRWESA----RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           P   T++L++     +G+  +A      V + M VS A      +S ++ G    G   +
Sbjct: 188 PSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA-----TFSILINGLVKAGMMIQ 242

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + +E  ++G   D H Y  +++   K   +  A+A  +++ + G  P   T+N L++
Sbjct: 243 AHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLN 302

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR + A +L  ++ + G  P   TY  +I+ LG+++R  +  +L   M ++GL  
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           + V YT L+    Q+G+             QA + ++ M + G  P  + L+++I+   +
Sbjct: 363 DTVCYTALIRGLLQTGKI-----------PQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             R   A  + + M+  GL P+ V Y+ L+  L +  K 
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 18/305 (5%)

Query: 351 LKDAE-----FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           LKDA+     F      R G     HT + L+D +A   R   A  +LK    +  +P+ 
Sbjct: 95  LKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDV 154

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
             ++ ++ GY    E +  F V++EM+   GV P    +N+++    K   +  AM  F+
Sbjct: 155 ETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 214

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
             +   +     T++ LI+   K G   +A  L +E    G      TY  ++N L + +
Sbjct: 215 -AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK 273

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           + ++   L+  + A G  P + TY  L++   + GR ++AI+ L  + D           
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD----------- 322

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +G  P  +   SLI+  G+++R  EA+ + + M   GL  D V YT L++ L++  K  +
Sbjct: 323 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQ 382

Query: 645 VFSSY 649
             S Y
Sbjct: 383 ASSVY 387


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 247/571 (43%), Gaps = 34/571 (5%)

Query: 95  SNSESASALASSPSS--LNRVEFK--LAESYRAV-------PAP---LWHSLLKNLCSSN 140
           +  E+ SA + +P++  L R+  +  LAE+ R V        AP   L   L++NLC   
Sbjct: 33  TRPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRG 92

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
            + D A  + +  +       +   Y+ L+    R  +L  A  L     + P   TY  
Sbjct: 93  RTSDAARVLRAAERSGTAVDVFA--YNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTP 150

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I        + +AL+L+  M   G     + Y+++++++ ++     ++  ++  E+  
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM--EVLDEMRA 208

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G  + G    A  FL      G  P T +Y  V+  L  + R  +
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
            E +F E+ E    P    ++ L++ + + G ++ A  V+ +M   G   +    +++I+
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                GR + A   L  M      P++  Y+ +L G      W+   ++LKEM      P
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   +N  I    +   +  A    ++M   G E + +T+N L++     GR D A ELF
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
             M  +   P T TY  ++  L   ER +    LL  M  +   PNVVT+  LV  + Q 
Sbjct: 449 YSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G  D+AIE +E + +            G  P+ +  N+L++    D    EA  +L  + 
Sbjct: 506 GLMDEAIELVEQMMEH-----------GCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            NG+ PD+VTY++++  L R D+  +    +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 225/491 (45%), Gaps = 23/491 (4%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLE 210
           H  C    + Y++L+ A+ +S    +A  +    R    TP  +TYN +I+   R   ++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
            A   ++++   G+  D ++Y+ V++ L    + +   +++L+ E+  +K  +  ++  D
Sbjct: 233 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED--VEELFAEMM-EKNCMPNEVTFD 289

Query: 271 VIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++V F  + G   +A++ L    G G +  T     VI  +   GR  +A      +   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P T +Y  +LKG  +    +DA+ ++ EM R    P+E T++  I      G  E A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +++++M     + N   Y+ ++ G+  +G      ++   M     +P+T  Y  ++  
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTG 466

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 L  A      ML +   P+ +T+N L+    + G  D A EL E+M E G  P 
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +++ +      E+   LL  + + G+ P++VTY++++ +  +  R ++AI+   
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK--- 583

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    F +++  G++P  +  N ++ A  +      A     YM  NG  P+ +TY
Sbjct: 584 --------MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 630 TTLMKALIRVD 640
            TL++ L   D
Sbjct: 636 ITLIEGLANED 646



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/419 (20%), Positives = 175/419 (41%), Gaps = 12/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + ++LK LC++    D+       ++K+  C   E+ + +L+    R   +  A  + ++
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKN--CMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                        N +I+   +   ++ A   ++ M   G   D I+Y+ V++ L R  +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +  ++L KE+       +    N  I    + G   +A   +      G      TY
Sbjct: 371 WEDA--KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A++      GR   A  +F  +     KP T  Y  LL G      L  A  +++EM +
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               P+  T+++L+  +   G  + A  ++++M      PN   Y+ +L G  +    + 
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  + S+GV PD   Y+ +I    + + +  A+  F  +   G+ P  + +N ++ 
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    D A + F  M   G  P   TY  +I  L  ++  ++ + LL  + ++G+L
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 48/441 (10%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+   + + ++ A  ++ +MR   +  D + Y+++I SL    K+D +L       
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL------- 213

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                 ++  QLL+D                           P   TY  +I A    G 
Sbjct: 214 ------KVLNQLLSD------------------------NCQPTVITYTILIEATMLEGG 243

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + +E+   GLKP    YN +++G  K G +  A  +V  +E  G  PD  +Y++
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+ A  N G+WE    ++ +M      PN   YS ++      G+ +    +LK MK  G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PD + Y+ +I  F +   L  A+   + M+S+G  PD + +NT++    K G+ D+A 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+F ++ E G  P +++YN M + L           ++  M + G+ P+ +TY +++   
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EG+ D+A      MR+    PS +  N ++  F +  R  +A  VL+
Sbjct: 484 -----------CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M  NG +P+  TYT L++ +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGI 553



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +  ++ +A  +  R R    +P  +TYN +I +      L+ AL +++++ 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            D      I Y+++I++      +D +L  KL  E+    ++ D    N +I G  K G 
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +   +  G  P   +Y  ++ AL N G+  E E +  ++      P    Y+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G +++A  ++  M+  G+ PD ++Y  LI A+   GR + A   L+ M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ +LA     G+  +  ++  ++   G  P++  YN M            A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M+S GI+PD IT+N++I C  + G  D A EL  +M+   + P   TYNI++   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            +  R ED   +L +M   G  PN  TYT L++  G +G   +A+E
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 25/395 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++G+  +++  L      G +P       +I          +A  V E L++ G +P  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AYNAL+ G+ KM  + DA  V+  M      PD  TY+++I +  + G+ + A  VL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +   + +P    Y+ ++      G      +++ EM S G++PD   YN +I    K   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A      +  +G EPD I++N L+      G+++  E+L  +M      P   TY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           +I  L    + E+   LL  M+ +GL P+  +Y  L+  + + GR D AIE         
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G +DQA+  F  +   G  P++ + N++ +A         A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            ++  M  NG+ PD +TY +++  L R     + F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 18/280 (6%)

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G +  +  +L+ M      P+  + ++++ G+       +  +V++ ++  G +PD   
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I+ F K N +  A    DRM S+   PDT+T+N +I      G+ D A ++  ++ 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P   TY I+I     +   ++  +L+  M ++GL P++ TY T+  I G      
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI--IRGM----- 273

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EG+ D+A    R +   G +P  ++ N L+ A     +  E   ++  M     
Sbjct: 274 ----CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            P+VVTY+ L+  L R  K  +        N+ K++   G
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA------MNLLKLMKEKG 363


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 235/563 (41%), Gaps = 98/563 (17%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMSKMRQ 221
           S L+  L R  K+ +AF L  R +          YNALI++  ++   ++A  L  +M +
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSL--LQKL-----------YKEI---ECDKIELDG 265
            G   + + YS++I S  R  K+D+++  L K+           Y  +    C    L  
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454

Query: 266 QL-----------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            +                    +I G+   G   +A R      G G++P T T+  +I+
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           AL  + R  +A  +F+E+ E  + P    YN +++G+ K G    A  ++++M + G++P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D +TY  LI +  + GR   A+  + ++   H K N   YS +L GY   G  +    V 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 429 KEMKSSGVE-----------------------------------PDTHFYNVMIDTFGKY 453
           +EM   GV+                                   PD   Y  MID + K 
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA 694

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A   +D M+ EG  P+ +T+ TLI+   K G  D+AE L++EM      P   TY
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------- 566
              ++ L  +   E   +L  +M  +GLL N V+Y  LV  + + GR ++A +       
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMID 813

Query: 567 -----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            C  G  D A+  +  M   GLKP  LA N LI          +
Sbjct: 814 NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGK 873

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
           AF +   M   G+KP+  T+ +L
Sbjct: 874 AFELRDDMIRRGVKPNQATHKSL 896



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/503 (23%), Positives = 226/503 (44%), Gaps = 33/503 (6%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +Y  +I +    +   +A  + QR     L  + YN LI    +N  + +A+ + + + Q
Sbjct: 230 IYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQ 289

Query: 222 DGYHCDFINYSLVIQSLTRTNK--IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            G     + Y  ++  L +  +  + + ++ ++   IE   +  +  L + ++ G  + G
Sbjct: 290 KGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM---IELGFVPTEAAL-SSLVEGLRRKG 345

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   +   + VG  P    Y A+I +L   G+  EAE +F+E+ E GL      Y+
Sbjct: 346 KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYS 405

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+  + + G L  A   + +M  +G+    + Y+ LI+ +   G   +A     EM   
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP    Y+ +++GY ++G+    F++  EM   G+ P+T+ +  +I    + N +  A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD ML + + P+ +T+N +I+ H K G   +A EL  +M ++G  P T TY  +I+ 
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA- 578
           L    R  + K+ + ++  +    N + Y+ L+  Y + GR  DA+     +  + V+  
Sbjct: 586 LCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMD 645

Query: 579 -----------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                                   + M    L+P  +   S+I+ + +     +AF +  
Sbjct: 646 LVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWD 705

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M + G  P++VTYTTL+  L +
Sbjct: 706 IMIDEGCTPNIVTYTTLINELCK 728



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 16/404 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI AL R+ ++ +AF     +L Q      +TYN +I    +  +  KA  L+++M 
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D   Y  +I SL  T ++  +  +K   ++  +  +L+    + ++ G+ K G 
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEA--KKFIDDLHREHFKLNEMCYSALLHGYCKEGR 626

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+         G+      YA +I        T     + + + +  L+P    Y +
Sbjct: 627 LRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS 686

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K G +K A  +   M   G  P+  TY+ LI+    AG  + A ++ KEM VS+
Sbjct: 687 MIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSN 746

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
           + PN   Y   L      G  ++  Q+  +M   G+  +T  YN+++  F K   +  A 
Sbjct: 747 STPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEAT 805

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
              D M+   I PD IT++T+I    + G  D A E ++ M  +G  P T  YN +I   
Sbjct: 806 KLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGC 865

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            + GE  +  +++    +M  +G+ PN  T+ +L   +G S +F
Sbjct: 866 CIAGELGKAFELR---DDMIRRGVKPNQATHKSLS--HGASRKF 904



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 130/334 (38%), Gaps = 53/334 (15%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           Y + PL++ L        A         L+R  FKL E         + +LL   C    
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDD---LHREHFKLNEM-------CYSALLHGYCKEGR 626

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTY 196
             D A  V   + K  +     + Y++LI    + +     F L +    QRL P  + Y
Sbjct: 627 LRD-ALGVCREMVKRGVDMDL-VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
            ++I   ++   ++KA  +   M  +G   + + Y+ +I  L +   +D + L  L+KE+
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL--LWKEM 742

Query: 257 -----------EC---DKIELDG------QLLND--------------VIVGFAKAGDAS 282
                       C   D +  +G      QL ND              ++ GF K G   
Sbjct: 743 LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVE 802

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A + L       + P   TY+ +I      G    A   ++ +   GLKP T AYN L+
Sbjct: 803 EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            G    G L  A  +  +M R GV P++ T+  L
Sbjct: 863 YGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/513 (24%), Positives = 230/513 (44%), Gaps = 55/513 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---YEAFLL 185
           ++ ++  LC +   ++ AY +   ++   L +   L  +I++  L +++K    YE F  
Sbjct: 394 YNIIIDMLCMA-GKVEEAYMIRDEMEHAGL-FPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           + ++   P  +TY +LI    +  +++ A  L   M   G++ + + Y+ +I++     +
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR 511

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +     K++KE+     + D  LLN  +    KAGD  K                    
Sbjct: 512 KEDG--HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEK-------------------- 549

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
                     GR     A+FE++K  G  P  ++Y+ L+ G  K G  ++   +   M++
Sbjct: 550 ----------GR-----AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 594

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G   D   Y+ ++D +  +G+ + A  VL+EM+V    P    Y  I+ G         
Sbjct: 595 QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDE 654

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + + +E KS G+E +   Y+ +ID FGK   +  A    + M+ +G+ P+  TWN+L+D
Sbjct: 655 AYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 714

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K    + A   F+ M+E    P T TY+I+IN L   +++         M+ QGL+P
Sbjct: 715 ALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVP 774

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTYTT++    + G   D           A + F   + +G  P   + N+LI     
Sbjct: 775 NVVTYTTMIAGLAKVGNITD-----------ACSLFERFKANGGTPDAASFNALIEGMSH 823

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             R  EA+ V +  +  G + +V    +L+ AL
Sbjct: 824 ANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 237/524 (45%), Gaps = 24/524 (4%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           +L N+C        ++D+A+     L+   L    ++ Y+ +I  L ++ +L EA   F 
Sbjct: 253 VLYNVCIDCFGKAGNVDMAWKFFHELKSQGL-KPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             + +R  P  Y  N +I         E A  L+ ++++ G     ++++ ++  L +  
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L   L++ ++ D  E +    N +I     AG   +A       +  GL P   T
Sbjct: 372 KVDEAL--TLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  + +   A  +FE   + G  P +  Y +L+ G  K G + DA  +   M 
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENML 488

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G   +   Y+ LI  +   GR E    + KEM     +P+  + +  +      G+ +
Sbjct: 489 DTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVE 548

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + +++K  G  PD   Y+++I    K        + F  M  +G   D   +N ++
Sbjct: 549 KGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVV 608

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+ D+A E+ EEM+ +   P   TY  +I+ L + +R ++   L    +++G+ 
Sbjct: 609 DGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIE 668

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NV+ Y++L+D +G+ GR D+A   LE            M   GL P+    NSL++A  
Sbjct: 669 LNVIVYSSLIDGFGKVGRIDEAYLILEE-----------MMKKGLTPNVYTWNSLMDALV 717

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MKE    P+  TY+ L+  L RV K++K F
Sbjct: 718 KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 761



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 216/471 (45%), Gaps = 24/471 (5%)

Query: 183 FLLSQRQRLTPL---TYNALISACARN-DDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           FL S      PL    YNA++   + +   +EK L  MS +   GY       + ++ +L
Sbjct: 101 FLASSAASPHPLPADAYNAVLPFLSHDLAAMEKVLEEMSVL---GYGVPNPACADLVSAL 157

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            RT ++D +  +++   +   K          +I   A+A    +A+  L   Q VG   
Sbjct: 158 VRTRRLDDA--ERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEV 215

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               +  ++ AL+  GR   A A+ +E+K S L+P    YN  +  + K G +  A    
Sbjct: 216 GVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 275

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            E++  G+ PD+ +Y+ +I     AGR   A  +  +ME   A P ++ Y+ ++ GY   
Sbjct: 276 HELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSA 335

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+++  +++L ++K  G  P    +N ++   GK   +  A+  F+ M  +  EP++ T+
Sbjct: 336 GQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTY 394

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +ID     G+ + A  + +EM+  G FP   T NIM++ L + +++E    +      
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G  PN VTY +L+D  G+ G  DDA    E + D   NA  V+ T           SLI
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT-----------SLI 503

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             F    R  +   + + M   G +PD+    T M  + +   V+K   +F
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/531 (21%), Positives = 232/531 (43%), Gaps = 18/531 (3%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F   E+ RAVP    ++ +     S    + AY ++  L++   C    + ++ ++  LG
Sbjct: 310 FGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG-CIPSVVSFNSILTCLG 368

Query: 175 RSEKLYEAFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           +  K+ EA  L  + ++   P   TYN +I        +E+A  +  +M   G   + + 
Sbjct: 369 KKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
            ++++  L +  K + +   ++++         +      +I G  K G+   A R    
Sbjct: 429 VNIMVDRLCKAKKFEPAY--EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN 486

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G +     Y ++I      GR  +   +F+E+   G +P     N  +    K G 
Sbjct: 487 MLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGD 546

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++    +  +++  G LPD  +YS+LI     AG+      +   M+      ++  Y+ 
Sbjct: 547 VEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNA 606

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+   G+  + ++VL+EMK   V P    Y  +ID   K + L  A   F+   S+G
Sbjct: 607 VVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKG 666

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           IE + I +++LID   K GR D A  + EEM ++G  P   T+N +++ L + E   +  
Sbjct: 667 IELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEAL 726

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
               +M+     PN  TY+ L++   +  +++           +A   ++ M+  GL P+
Sbjct: 727 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYN-----------KAFVFWQEMQKQGLVPN 775

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +   ++I    +     +A ++ +  K NG  PD  ++  L++ +   ++
Sbjct: 776 VVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANR 826



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 179/374 (47%), Gaps = 28/374 (7%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y AV+  LS+    +E   V EE+   G      A   L+   V+   L DAE V++ M 
Sbjct: 117 YNAVLPFLSHDLAAMEK--VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMR 174

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R    P    Y++LI A A A + E A  +L++M+    +    +++ ++      G  +
Sbjct: 175 RLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVE 234

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               ++ E+K S +EPD   YNV ID FGK   +  A   F  + S+G++PD +++ ++I
Sbjct: 235 GALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMI 294

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K GR   AEELF +M+     PC   YN MI   G   ++E+  +LL  ++ +G +
Sbjct: 295 WVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCI 354

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIE-----------------------CLEGLSDQAVNAF 579
           P+VV++ +++   G+  + D+A+                        C+ G  ++A    
Sbjct: 355 PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIR 414

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR- 638
             M   GL P+ L +N +++   + ++   A+ + +   + G  P+ VTY +L+  L + 
Sbjct: 415 DEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKK 474

Query: 639 --VDKFHKVFSSYL 650
             VD  +++F + L
Sbjct: 475 GNVDDAYRLFENML 488


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 207/458 (45%), Gaps = 21/458 (4%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYK 254
           N+L++  AR  +  +   LM KM +     + + + ++I  + +  ++D +L  L+K+  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 255 EIECDKI----ELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITA 309
             E   I    E D  + N +I G  K G   + +  +  M    G +P T TY  +I  
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              +G   + + +F+E+ + G+ P     N L+ G  + G +  A     E +R G+  D
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LI+A+ N   +E A  +  EM  S   P++ +Y  +++G+   G       VL 
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           E+K  G+ PDT  YN +I  F + N  H        M   G++PDTIT+NTLI    K G
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL-PNVVTY 548
               A+++  +M + G  P   TY  +IN         +   +  +M+A   + PN V Y
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIY 668

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L++   ++ +   A+  +E            M+  G+ P+    N++      D++D 
Sbjct: 669 NILINSLCKNNKVKSAVSLMED-----------MKIWGVTPNTTTYNAIFKGL-RDEKDL 716

Query: 609 E-AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           E  F  +  M E+   PD +T   L + L  V +  ++
Sbjct: 717 EKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERL 754



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 152/342 (44%), Gaps = 39/342 (11%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +IT L  + +T     +F E+ + G    + A N+LL G  + G       ++ +M    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P+  T+ +LI+      R + A  VL++M                +G ++ G      
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKM----------------SGGKESGGI---- 375

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDC 484
                  S  VEPD   YN +ID   K       +   +RM S+ G  PDTIT+N LID 
Sbjct: 376 -------SVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K G  ++ +ELF+EM + G  P   T N ++  +    R           + +G+  +
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            VTYT L++ +     F+ A+E            F  M   G  P  +   +LI+ F + 
Sbjct: 489 AVTYTALINAFCNVNNFEKAME-----------LFNEMLKSGCSPDAIVYYTLISGFSQA 537

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            R A+A  VL  +K+ G++PD V Y TL+    R +KFH+VF
Sbjct: 538 GRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVF 579



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 169/376 (44%), Gaps = 9/376 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFL 184
           ++++L+  LC      +    ++  ++    C    + Y+ LI      G  EK  E F 
Sbjct: 385 IYNTLIDGLCKVGRQQE-GLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFD 443

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              ++ + P  +T N L+    R   +  A+N   + ++ G   D + Y+ +I +    N
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVN 503

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             + ++  +L+ E+       D  +   +I GF++AG  + A   L   + +G+ P T  
Sbjct: 504 NFEKAM--ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVC 561

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I     + +      + +E++E+GLKP T  YN L+    K G LK A+ V+ +M 
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV-SHAKPNSFIYSRILAGYRDRGEW 421
           ++GV+P   TY  +I+AY   G    A  + K+M+  S   PN+ IY+ ++       + 
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKV 681

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    ++++MK  GV P+T  YN +         L       DRM+     PD IT   L
Sbjct: 682 KSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741

Query: 482 IDCHFKCGRYDRAEEL 497
            +     G  +R ++ 
Sbjct: 742 TEWLSAVGEIERLKKF 757



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 152/368 (41%), Gaps = 35/368 (9%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAV-FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           P T   A+ +   S     +E   + F +L  S     T   N  L   ++ G +KDA  
Sbjct: 154 PLTVNAASFLLRASGRSELVEESLILFNDLDPS--VKNTYLRNVWLSILLRSGRVKDALK 211

Query: 357 VVSEM----ERSGVLPDEHTYSLLIDAYANAGRWES-------ARIVLKEMEVSHAKPNS 405
           V+ EM    + S   P++ T  +L        R E          +VLK  E      +S
Sbjct: 212 VIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGE-HGVLISS 270

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
           F   R++       +  R + +  EM   G   ++   N ++    +    +      ++
Sbjct: 271 FWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEK 330

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM---QERGYF-----PCTTTYNIMI 517
           M+   I+P+ +T+  LI+   K  R D A E+ E+M   +E G       P    YN +I
Sbjct: 331 MVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI 390

Query: 518 NLLGEQERWEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           + L +  R ++   L+  MR+Q G  P+ +TY  L+D + ++G  +   E          
Sbjct: 391 DGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE---------- 440

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  M  +G+ P+ + +N+L+       R + A       +  G+K D VTYT L+ A 
Sbjct: 441 -LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499

Query: 637 IRVDKFHK 644
             V+ F K
Sbjct: 500 CNVNNFEK 507


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 271/617 (43%), Gaps = 75/617 (12%)

Query: 78  QKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLC 137
           ++Q    +PL+  L E+  S+  S      S L++  +    S +++   +  S + +L 
Sbjct: 39  RRQFCSVSPLIRNLPEDE-SDPTSVPHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLF 97

Query: 138 SSNSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT 192
           S +     A     W+      KH++ YSY  L ++LI+  G    +++  LL       
Sbjct: 98  SLDLDPKTALNFSHWISQNPRYKHSV-YSYASLLTLLINN-GYVGVVFKIRLL------- 148

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQD-----GYHCDFINYSLVIQSLTRTNKIDSS 247
                 +I +C    D    L+L  KM +D      Y      Y+ ++ SL R   +D  
Sbjct: 149 ------MIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDE- 201

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
            ++++Y E+  DK+  +    N ++ G+ K G+  +A +++ M    GL P   TY ++I
Sbjct: 202 -MKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLI 260

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                      A  VF+E+   G +    AY  L+ G      + +A  +  +M+     
Sbjct: 261 MGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK------------------------- 402
           P   TY++LI A   + R   A  ++KEME    K                         
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 403 ----------PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
                     PN   Y+ ++ GY  RG  +    V++ M+S  + P+T  YN +I  + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            N +H AM   ++ML   + PD +T+N+LID   + G +D A  L   M +RG  P   T
Sbjct: 441 RN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y  MI+ L + +R E+   L  ++  + ++PNVV YT L+D Y ++G+ ++A   LE   
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK-- 557

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                    M +    P++L  N+LI+    D +  EA  + + M +  L+P V T T L
Sbjct: 558 ---------MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608

Query: 633 MKALIRVDKFHKVFSSY 649
           +  L++   F   +  +
Sbjct: 609 IHRLLKDGDFDHAYRRF 625



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 229/534 (42%), Gaps = 55/534 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SL+   C     +D A+ V   +     C   E+ Y+ LIH L    ++ EA  L  +
Sbjct: 256 YTSLIMGYCQ-RKDLDSAFKVFKEMPLKG-CRRNEVAYTHLIHGLCVERRIDEAMDLFVK 313

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +      T  TY  LI A   ++   +ALNL+ +M + G   +   Y+++I SL    K
Sbjct: 314 MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK 373

Query: 244 IDSSLLQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQ 292
           ++ +              EL GQ+L           N +I G+ K G    A+  + + +
Sbjct: 374 LEKAR-------------ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 293 GVGLSPKTATYAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
              L P T TY  +I       R + +A  V  ++ E  + P    YN+L+ G  + G  
Sbjct: 421 SRNLRPNTRTYNELIKGYCK--RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  ++S M   G++PD  TY+ +ID+   + R E A  +   +E     PN  +Y+ +
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G+      +L++M S    P++  +N +I        L  A    ++M+   +
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +P   T   LI    K G +D A   F++M   G  P   TY   I     + R +D + 
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           ++  M+  G+ P++ TY++L+  YG  GR + A   L+ + D            G +PS 
Sbjct: 659 MVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDT-----------GCEPSQ 707

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
               SLI    E          ++Y K  G +P V   + +M+  I V+   K+
Sbjct: 708 HTFLSLIKHLLE----------MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKM 751



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 206/462 (44%), Gaps = 34/462 (7%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LI    R+ + + A  L+S M   G   D   Y+ +I SL ++ +++ +    L+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC--DLF 520

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +E   +  +  +   +I G+ KAG  ++A   L         P + T+ A+I  L   
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  + E++ +  L+P       L+   +K G    A     +M  SG  PD HTY
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +  I  Y   GR + A  ++ +M+ +   P+ F YS ++ GY D G     F VLK M  
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700

Query: 434 SGVEPDTHFYNVMID-----TFGKYN------CLHHAMAAFD-------RMLSEGIEPDT 475
           +G EP  H +  +I       +GK        C+   M  FD       +M+  G+ P+ 
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNA 760

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQER-GYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            ++  L+    + G    AE++F+ MQ++ G  P    +N +++   + E+  +  +++ 
Sbjct: 761 KSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVD 820

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M   G LP + +   L+    + G             ++  + F+ +   G     LA 
Sbjct: 821 DMICVGHLPQLESCKILICRLYKKGE-----------KERGTSVFQNLLQCGYYDDELAW 869

Query: 595 NSLINAFGEDQRDAEAF-AVLQYMKENGLKPDVVTYTTLMKA 635
             +I+  G+ Q   EAF  +   M++NG      TY+ L++ 
Sbjct: 870 KIIIDGVGK-QGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 135/564 (23%), Positives = 239/564 (42%), Gaps = 67/564 (11%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLS---QRQRLTP--LTYNALISACARNDDL 209
           K + CY     Y++LI AL  SE+  EA  L    + + + P   TY  LI +      L
Sbjct: 315 KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKL 374

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--------------------- 248
           EKA  L+ +M + G   + I Y+ +I    +   I+ +L                     
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNEL 434

Query: 249 -----LQKLYKEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLS 297
                 + ++K +      L+ ++L DV+       G  ++G+   A R L +    GL 
Sbjct: 435 IKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY ++I +L  S R  EA  +F+ L++  + P    Y AL+ GY K G + +A  +
Sbjct: 495 PDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLM 554

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + +M     LP+  T++ LI      G+ + A ++ ++M     +P     + ++     
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLK 614

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G++   ++  ++M SSG +PD H Y   I T+ +   L  A     +M   G+ PD  T
Sbjct: 615 DGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFT 674

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE------------- 524
           +++LI  +   GR + A  + + M + G  P   T+  +I  L E +             
Sbjct: 675 YSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCV 734

Query: 525 -----RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                 ++ V  LL  M   G+ PN  +Y  L+    + G    A    E + D      
Sbjct: 735 MSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA----EKVFDH----- 785

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            + + +G+ PS L  N+L++   + ++  EA  V+  M   G  P + +   L+  L + 
Sbjct: 786 -MQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYK- 843

Query: 640 DKFHKVFSSYLFFNIYKMLSYSGE 663
            K  K   + +F N+ +   Y  E
Sbjct: 844 -KGEKERGTSVFQNLLQCGYYDDE 866


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 197/389 (50%), Gaps = 14/389 (3%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E+D +   + ++   ++G+    + FL      G+  +  ++ AV+  L   G  + A+A
Sbjct: 154 EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKA 213

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +EL   G KP    YN LL GY+++  +     ++S ME++ V  +  TY++LI+ Y+
Sbjct: 214 LMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYS 273

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            + + E A  +  EM     +P+ +IY+ I+      G  +R F +  EM    + P+ +
Sbjct: 274 RSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAY 333

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  +I+   K   +  A    + M S+G++ + + +NTL+D + K G  D A  L   M
Sbjct: 334 TYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIM 393

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Q++G+     T NI+ +      R E+ KRLL  M  +G+ PNVV+++ L+DIY      
Sbjct: 394 QQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY------ 447

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C E    +A   F+VM   G  PS +  N+ I  + +  +  EA+ ++  M+E G
Sbjct: 448 -----CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502

Query: 622 LKPDVVTYTTLM---KALIRVDKFHKVFS 647
           L PD  TYT+L+   +A   VD+  ++F+
Sbjct: 503 LMPDTYTYTSLIDGERASGNVDRALELFN 531



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 204/438 (46%), Gaps = 13/438 (2%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
           A  R+ ++E  +  + +M   G      +++ V+  L +  ++  +  + L  E+ C   
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRA--KALMDELVCKGF 223

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           +      N ++ G+ +  D       L + +   +     TY  +I   S S +  EAE 
Sbjct: 224 KPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEK 283

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+E+ + G++P    Y +++    K G +K A  +  EM    ++P+ +TY  LI+   
Sbjct: 284 LFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGAC 343

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
            AG  ++A +++ +M+      N  I++ ++ GY  +G      ++   M+  G E D  
Sbjct: 344 KAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAF 403

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N++   F + N    A      M   G+ P+ ++++ LID + K   +  A  LF+ M
Sbjct: 404 TCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVM 463

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +++G  P   TYN  I    ++ + E+  +L+  M+ +GL+P+  TYT+L+D    SG  
Sbjct: 464 EKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNV 523

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D A+E            F  M   GL  + +    +I+   +D R  EAF +   M + G
Sbjct: 524 DRALE-----------LFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEG 572

Query: 622 LKPDVVTYTTLMKALIRV 639
           + PD   Y++L+ +L +V
Sbjct: 573 IVPDDGIYSSLIASLHKV 590



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 152/312 (48%), Gaps = 11/312 (3%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VF+  ++ G +   ++    L    + G ++     + +M  SG+     +++ ++D   
Sbjct: 144 VFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 203

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    A+ ++ E+     KP+   Y+ +L GY +  +     ++L  M+ + V+ +  
Sbjct: 204 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 263

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y ++I+ + + + +  A   FD ML +GIEPD   + ++I+ + K G   RA  LF+EM
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ER   P   TY  +IN   +    +  + ++ +M+++G+  N V + TL+D Y      
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY------ 377

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C +G+ D+A+    +M+  G +      N + + F    R  EA  +L  M+E G
Sbjct: 378 -----CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 432

Query: 622 LKPDVVTYTTLM 633
           + P+VV+++ L+
Sbjct: 433 VAPNVVSFSILI 444



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 159/346 (45%), Gaps = 8/346 (2%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISAC 203
           ++S ++K+ + Y+    Y++LI    RS K+ EA   F    ++ + P    Y ++I+  
Sbjct: 249 ILSLMEKNVVDYNVTT-YTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN 307

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +  ++++A  L  +M +     +   Y  +I    +  ++ ++  + +  +++   +++
Sbjct: 308 CKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA--EMMVNDMQSKGVDV 365

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +  + N ++ G+ K G   +A+R   + Q  G      T   + +    S R  EA+ + 
Sbjct: 366 NRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLL 425

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             ++E G+ P   +++ L+  Y K     +A  +   ME+ G  P   TY+  I+ Y   
Sbjct: 426 LTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKK 485

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G+ E A  ++ EM+     P+++ Y+ ++ G R  G   R  ++  EM   G+  +   Y
Sbjct: 486 GKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 545

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            V+I    K      A   +D M  EGI PD   +++LI    K G
Sbjct: 546 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 167 SILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           +I+     RS +  EA   LL+  +R + P  ++++ LI    +  +  +A  L   M +
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 465

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G     + Y+  I+   +  K++ +   KL  E++   +  D      +I G   +G+ 
Sbjct: 466 KGKAPSVVTYNAFIERYCKKGKMEEAY--KLINEMQERGLMPDTYTYTSLIDGERASGNV 523

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+        +GL+    TY  +I+ LS  GR  EA  +++E+ + G+ P    Y++L
Sbjct: 524 DRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 583

Query: 342 LKGYVKMGYLKDA-EFVVSEME 362
           +    K+G L    E VV  +E
Sbjct: 584 IASLHKVGPLVSGLENVVDRIE 605


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 223/503 (44%), Gaps = 39/503 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
           +S L   + R+++      L ++  L  + +N      +I+ C R   L  A + M K+ 
Sbjct: 75  FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLNDVIVGFA 276
           + GY  D + +S +I  L    ++  +L      E+    +E+  +     LN ++ G  
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEAL------ELVDRMVEMGHKPTLITLNALVNGLC 188

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
             G  S A+  +      G  P   TY  V+  +  SG+T  A  +  +++E  +K    
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y+ ++ G  K G L +A  + +EME  G   D   Y+ LI  +  AGRW+    +L++M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   +S ++  +   G+ +   ++ KEM   G+ PDT  Y  +ID F K N L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A    D M+S+G  P+  T+N LI+ + K    D   ELF +M  RG    T TYN +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS---- 572
           I    E  + E  K L   M ++ + P++V+Y  L+D    +G  + A+E  E +     
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 573 --------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                               D A + F  +   G+KP     N +I    +    +EA  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 613 VLQYMKENGLKPDVVTYTTLMKA 635
           + + M+E+G  P+  TY  L++A
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRA 571



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 216/478 (45%), Gaps = 37/478 (7%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           ++ +L  + Y+ +I    ++  L+ A NL ++M   G+  D I Y+ +I+      + D 
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               KL +++   KI  D    + +I  F K G   +A          G+SP T TY ++
Sbjct: 301 G--AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I       +  +A  + + +   G  P  + +N L+ GY K   + D   +  +M   GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           + D  TY+ LI  +   G+ E A+ + +EM     +P+   Y  +L G  D GE ++  +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + ++++ S +E D   YN++I      + +  A   F  +  +G++PD  T+N +I    
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINL-LGEQER------WEDVKRL------- 532
           K G    A+ LF +M+E G+ P   TYNI+I   LGE +        E++KR        
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 533 --------LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--QAVNAFRVM 582
                   L  M   G  P+V T+TTL+  +           CLE  +    A   F+ M
Sbjct: 599 TLRFALSTLARMLKAGHEPDVFTFTTLLRPF-----------CLEENASVYDAPTLFKNM 647

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           +  G KP+ +  N++I         ++   VL  M E G +P+ VT +T +  L + D
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQD 705



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 251/560 (44%), Gaps = 48/560 (8%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQ 187
           S++ N C     + LA++ +  + K      YE   + +S LI+ L    ++ EA  L  
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIK----LGYEPDTVTFSTLINGLCLEGRVSEALELVD 166

Query: 188 R-----QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           R      + T +T NAL++    N  +  A+ L+ +M + G+  + + Y  V++ + ++ 
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSG 226

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +  ++L  +L +++E  KI+LD    + +I G  K G    A       +  G       
Sbjct: 227 Q--TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I     +GR  +   +  ++ +  + P   A++AL+  +VK G L++AE +  EM 
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           + G+ PD  TY+ LID +    + + A  +L  M      PN   ++ ++ GY       
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              ++ ++M   GV  DT  YN +I  F +   L  A   F  M+S  + PD +++  L+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D     G  ++A E+FE++++         YNI+I+ +    + +D   L  ++  +G+ 
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF- 601
           P+V TY  ++              C +G   +A   FR M  DG  P+    N LI A  
Sbjct: 525 PDVKTYNIMIGGL-----------CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573

Query: 602 --GEDQRDAE-------------------AFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
             G+  + A+                   A + L  M + G +PDV T+TTL++    ++
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFC-LE 632

Query: 641 KFHKVFSSYLFFNIYKMLSY 660
           +   V+ +   F   K + Y
Sbjct: 633 ENASVYDAPTLFKNMKAMGY 652



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 194/427 (45%), Gaps = 13/427 (3%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           + A++L  +M +       I++S +   + RT + D  L+  L K++E   I  +   L+
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I    +    S A   +G    +G  P T T++ +I  L   GR  EA  + + + E 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP     NAL+ G    G + DA  ++  M  +G  P+E TY  ++     +G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L++ME    K ++  YS I+ G    G     F +  EM+  G + D   Y  +I  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F               M+   I PD + ++ LIDC  K G+   AEEL +EM +RG  P 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T TY  +I+   ++ + +    +L  M ++G  PN+ T+  L++ Y ++   DD +E   
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE--- 408

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    FR M   G+    +  N+LI  F E  +   A  + Q M    ++PD+V+Y
Sbjct: 409 --------LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460

Query: 630 TTLMKAL 636
             L+  L
Sbjct: 461 KILLDGL 467



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 149/327 (45%), Gaps = 11/327 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F+E+  S  +PR   ++ L     +         +  +ME  G+  + +T S++I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +      +   A   + ++     +P++  +S ++ G    G      +++  M   G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P     N +++       +  A+   DRM+  G +P+ +T+  ++    K G+   A EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M+ER        Y+I+I+ L +    ++   L   M  +G   +++ YTTL+  +  
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR+DD  + L           R M    + P  +A ++LI+ F ++ +  EA  + + M
Sbjct: 295 AGRWDDGAKLL-----------RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
            + G+ PD VTYT+L+    + ++  K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDK 370


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 195/408 (47%), Gaps = 13/408 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           ++ S+V+    ++  +D +    L  E+    + L+    N ++  + +  +       L
Sbjct: 149 LSASVVVDGFCKSGSVDDA--HGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              +  G+ P   TY  ++  LS +G   + EAV++E+K   +      Y+A++  Y + 
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRG 266

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G ++ A  V  E    GV P+E TY  LI+ +   G+ E+A ++L +M++     N  ++
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVF 326

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY   G  ++  ++   M+  G+E D + YN +     + N +  A      M  
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G+ P+ +++ TLI  H K G    A  LF +M+ +G  P   TYN+MI+   +     +
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +R    M  +GL+P++ TY  LV  +G          C+ G  D A+  F  M+  G K
Sbjct: 447 AERFKKEMEKKGLVPDIYTYAGLV--HGH---------CVNGKVDVALRLFEEMKHRGTK 495

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           P+ +A  +L++   ++ R  EAF +   M   GL PD   Y+ L+ +L
Sbjct: 496 PNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 7/391 (1%)

Query: 167 SILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S+++    +S  + +A  LL +  R    L    YN+L+ +  R  + +    L+ +M  
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G       Y++++  L+R   I  S ++ +Y E++   +  D    + VI  + + G+ 
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDI--SKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A        G G+ P   TY A+I      G+   AE +  +++  G+      +N +
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY + G ++ A  + + ME+ G+  D +TY+ L        R E A+ +L  M     
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN   Y+ +++ +   G+     ++ ++M+  G  P    YNVMID + K   +  A  
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
               M  +G+ PD  T+  L+  H   G+ D A  LFEEM+ RG  P    Y  +++ L 
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA 509

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           ++ R E+  +L  +M A GL P+   Y+ LV
Sbjct: 510 KEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 175/410 (42%), Gaps = 51/410 (12%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTAT---YAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           AG    A   LG A  +   P + T    + V+     SG   +A  + +EL   G+   
Sbjct: 125 AGQLPAAADLLGKA--IASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLN 182

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN+LL  Y +         ++ EME  GV P   TY++L+D  + AG       V  
Sbjct: 183 ACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYD 242

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM+  +   + + YS ++  Y   G  +R  +V  E    GVEP+   Y  +I+ F K  
Sbjct: 243 EMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIG 302

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A      M   G+  + I +NT+ID + + G  ++A E+   M++ G      TYN
Sbjct: 303 QIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYN 362

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +   L    R ED K+LL  M  +G+ PN V+YTTL+ I+ + G   D +E        
Sbjct: 363 TLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEG---DMVE-------- 411

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQ--RDAEAFA-------------------- 612
           A   FR M   G +PS +  N +I+ + ++   R+AE F                     
Sbjct: 412 ARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVH 471

Query: 613 -------------VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                        + + MK  G KP+VV YT L+  L +  +  + F  Y
Sbjct: 472 GHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLY 521


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 189/375 (50%), Gaps = 12/375 (3%)

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           G+L + +I    + G    A      A   G       ++A+I+A   SG   EA  VF+
Sbjct: 190 GKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFD 249

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            +K +GL P    YNA++    K G   K    +   M  +GV PD  T++ L+   +  
Sbjct: 250 SMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRG 309

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G WE+AR +   M       + F Y+ +L      G+    F+++ EM +  + P+   Y
Sbjct: 310 GLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTY 369

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + MID + K   L  A+  F+ M   G+  D +++NTL+  + K GR+++A ++ +EM+ 
Sbjct: 370 STMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMEN 429

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G      TYN ++   G+Q R+++V+R+   M+   + PN++TY+TL+D+Y + G + +
Sbjct: 430 AGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKE 489

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E            FR  +  GLK   +  ++LI+A  ++     +  +L  M + G++
Sbjct: 490 AME-----------VFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIR 538

Query: 624 PDVVTYTTLMKALIR 638
           P+VVTY +++ A  R
Sbjct: 539 PNVVTYNSIIDAFGR 553



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 217/465 (46%), Gaps = 23/465 (4%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +A+IS   R   +E A  +     ++GY      +S +I +  R+   + ++  K++  +
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAI--KVFDSM 251

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMR--FLGMAQGVGLSPKTATYAAVITALSNSG 314
           + + +  +    N VI    K G   K +   F GM    G+ P   T+ +++   S  G
Sbjct: 252 KSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSN-GVQPDRITFNSLLAVCSRGG 310

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +F  + + G+      YN LL    K G +  A  ++SEM    +LP+  TYS
Sbjct: 311 LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYS 370

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +ID YA  GR + A  +  EM+      +   Y+ +L+ Y   G +++   V KEM+++
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENA 430

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D   YN ++  +GK          F+ M    + P+ +T++TLID + K G Y  A
Sbjct: 431 GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEA 490

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+F E ++ G       Y+ +I+ L +    E    LL  M  +G+ PNVVTY +++D 
Sbjct: 491 MEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDA 550

Query: 555 YGQSGR----FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE--DQRDA 608
           +G+S       DD+ E    L  +++++  V      + ++   N +I  FG+   ++  
Sbjct: 551 FGRSASAQCVVDDSGET-TALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKAC 609

Query: 609 EA-----------FAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           EA             V Q M E  +KP+VVT++ ++ A  R D F
Sbjct: 610 EAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSF 654



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 14/334 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFE--ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           Y  ++  L N G + +A   FE    +ESG   + K  +A++    ++G ++ A+ V   
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG- 419
             + G     + +S LI AY  +G    A  V   M+ +   PN   Y+ ++      G 
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           E+++  ++   M S+GV+PD   +N ++    +      A   F  M+ +GI+ D  T+N
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+D   K G+ D A E+  EM  +   P   TY+ MI+   +  R +D   +   M+  
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFL 395

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+  + V+Y TL+ +Y + GRF           +QA++  + M   G++   +  N+L+ 
Sbjct: 396 GVGLDRVSYNTLLSVYAKLGRF-----------EQALDVCKEMENAGIRKDVVTYNALLA 444

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            +G+  R  E   V + MK   + P+++TY+TL+
Sbjct: 445 GYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLI 478



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 191/414 (46%), Gaps = 20/414 (4%)

Query: 166 YSILIHALGRS----EKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y+ +I A G+     +K+ E F  +LS   +   +T+N+L++ C+R    E A  L S M
Sbjct: 263 YNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAM 322

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   D   Y+ ++ ++ +  ++D  L  ++  E+    I  +    + +I G+AK G
Sbjct: 323 VDKGIDQDIFTYNTLLDAVCKGGQMD--LAFEIMSEMPTKNILPNVVTYSTMIDGYAKVG 380

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A+      + +G+     +Y  +++  +  GR  +A  V +E++ +G++     YN
Sbjct: 381 RLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYN 440

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL GY K     +   V  EM+R  V P+  TYS LID Y+  G ++ A  V +E + +
Sbjct: 441 ALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQA 500

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             K +  +YS ++      G  + +  +L EM   G+ P+   YN +ID FG+       
Sbjct: 501 GLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCV 560

Query: 460 MAAFDRMLSEGIEP-DTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYNIMI 517
           +       +  +E   +I     I+        +R  E+F ++  E+      +    ++
Sbjct: 561 VDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEIL 620

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
            +LG  ++  ++K          + PNVVT++ +++   +   F+DA   LE L
Sbjct: 621 CILGVFQKMHELK----------IKPNVVTFSAILNACSRCDSFEDASMLLEEL 664



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-RYDR 493
           G     + ++ +I  +G+    + A+  FD M S G+ P+ +T+N +ID   K G  + +
Sbjct: 220 GYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKK 279

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             E+F+ M   G  P   T+N ++ +      WE  +RL   M  +G+  ++ TY TL+D
Sbjct: 280 VVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLD 339

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + G+ D A E +             M T  + P+ +  +++I+ + +  R  +A  +
Sbjct: 340 AVCKGGQMDLAFEIMSE-----------MPTKNILPNVVTYSTMIDGYAKVGRLDDALNM 388

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              MK  G+  D V+Y TL+    ++ +F +  
Sbjct: 389 FNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQAL 421



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 125/330 (37%), Gaps = 87/330 (26%)

Query: 392 VLKEMEVSHAKPNSFIYS-RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           VL   E     P+ + +  R L    D  +  R F+     + SG        + MI T 
Sbjct: 142 VLLNFESRLCGPDDYTFLLRELGNRGDSAKAVRCFE-FAVRRESGKNEQGKLASAMISTL 200

Query: 451 GKYNCLHHAMAAFDRMLSE-----------------------------------GIEPDT 475
           G+   +  A A FD  L E                                   G+ P+ 
Sbjct: 201 GRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNL 260

Query: 476 ITWNTLIDCHFKCG-RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           +T+N +ID   K G  + +  E+F+ M   G  P   T+N ++ +      WE  +RL  
Sbjct: 261 VTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFS 320

Query: 535 NMRAQG-----------------------------------LLPNVVTYTTLVDIYGQSG 559
            M  +G                                   +LPNVVTY+T++D Y + G
Sbjct: 321 AMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVG 380

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           R DDA+           N F  M+  G+    ++ N+L++ + +  R  +A  V + M+ 
Sbjct: 381 RLDDAL-----------NMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMEN 429

Query: 620 NGLKPDVVTYTTLMKAL---IRVDKFHKVF 646
            G++ DVVTY  L+       R D+  +VF
Sbjct: 430 AGIRKDVVTYNALLAGYGKQYRYDEVRRVF 459



 Score = 42.4 bits (98), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 60/284 (21%), Positives = 118/284 (41%), Gaps = 48/284 (16%)

Query: 166 YSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+   G   R +++   F   +R R++P  LTY+ LI   ++    ++A+ +  + +
Sbjct: 439 YNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFK 498

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D + YS +I +L +   ++SS+   L  E+  + I  +    N +I  F ++  
Sbjct: 499 QAGLKADVVLYSALIDALCKNGLVESSV--TLLDEMTKEGIRPNVVTYNSIIDAFGRSAS 556

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG------RTIE------AE-------- 320
           A   +   G  +   L  ++ +   V  A+ +        R IE      AE        
Sbjct: 557 AQCVVDDSG--ETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNS 614

Query: 321 ---------AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                     VF+++ E  +KP    ++A+L    +    +DA  ++ E+     L D  
Sbjct: 615 GKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELR----LFDNQ 670

Query: 372 TY----SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            Y     LL+    N   W  A+ +  E+++  +   S  Y+ +
Sbjct: 671 VYGVAHGLLMGYRENV--WLQAQSLFDEVKLMDSSTASAFYNAL 712


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 211/449 (46%), Gaps = 24/449 (5%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           + P T  +LI    R    +KA  +M  + Q G   D I Y+++I    ++ +ID++L  
Sbjct: 149 IIPCT--SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNAL-- 204

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
              + ++   +  D    N ++     +G   +AM  L         P   TY  +I A 
Sbjct: 205 ---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 261

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
                  +A  + +E++  G KP    YN L+ G  K G L +A   ++ M   G  P+ 
Sbjct: 262 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 321

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T+++++ +  + GRW  A  +L +M      P+   ++ ++     +G   R   +L++
Sbjct: 322 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 381

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  P++  YN ++  F K   +  A+   D M+S G  PD +T+NTL+    K G+
Sbjct: 382 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 441

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A E+  ++  +G  P   TYN +I+ L +  + E   +LL  MR +GL P+++TY++
Sbjct: 442 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 501

Query: 551 LVDIYGQSGRFDDAIEC---LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           LV    + G+ D+AI+    LEGL              G++P+ +  NS++    + ++ 
Sbjct: 502 LVSGLSREGKVDEAIKFFHDLEGL--------------GIRPNAITYNSIMLGLCKSRQT 547

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             A   L YM     KP   TYT L++ +
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGI 576



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 14/320 (4%)

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E +   G  P      +L++G+ ++G  K A +V+  +E+SG +PD  TY++LI  Y  
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G  ++A  VL  M V+   P+   Y+ IL    D G+ ++  +VL         PD   
Sbjct: 197 SGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y ++I+   K + +  AM   D M ++G +PD +T+N LI+   K GR D A +    M 
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 313

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   T+NI++  +    RW D ++LL +M  +G  P+VVT+  L++         
Sbjct: 314 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL------- 366

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C +GL  +A++    M   G  P++L+ N L++ F ++++   A   L  M   G 
Sbjct: 367 ----CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 623 KPDVVTYTTLMKALIRVDKF 642
            PD+VTY TL+ AL +  K 
Sbjct: 423 YPDIVTYNTLLTALCKDGKV 442



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 177/399 (44%), Gaps = 30/399 (7%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             + G+     +FL      G  P      ++I      G+T +A  V E L++SG  P 
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN L+ GY K G + +A  V   ++R  V PD  TY+ ++    ++G+ + A  VL 
Sbjct: 184 VITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
                   P+   Y+ ++          +  ++L EM++ G +PD   YNV+I+   K  
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A+   + M S G +P+ IT N ++      GR+  AE+L  +M  +G  P   T+N
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------- 566
           I+IN L  Q        +L  M   G  PN ++Y  L+  + +  + D AIE        
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 567 ----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                           C +G  D AV     + + G  P  +  N++I+   +  +   A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             +L  M+  GLKPD++TY++L+  L R   VD+  K F
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 196/435 (45%), Gaps = 16/435 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            RN +LE     +  M   G   D I  + +I+   R  K   +    + + +E      
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATW--VMEILEQSGAVP 182

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ K+G+   A++ L     + ++P   TY  ++  L +SG+  +A  V 
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVL---DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +   +    P    Y  L++   K   +  A  ++ EM   G  PD  TY++LI+     
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L  M     +PN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G  P+++++N L+    K  + DRA E  + M  
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 419

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN ++  L +  + +    +L  + ++G  P ++TY T++D   + G+ + 
Sbjct: 420 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 479

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           AI+ L+            MR  GLKP  +  +SL++    + +  EA      ++  G++
Sbjct: 480 AIKLLDE-----------MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR 528

Query: 624 PDVVTYTTLMKALIR 638
           P+ +TY ++M  L +
Sbjct: 529 PNAITYNSIMLGLCK 543



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 191/415 (46%), Gaps = 4/415 (0%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + Y++LI    +S ++  A  +  R  + P  +TYN ++     +  L++A+ ++ +  Q
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
              + D I Y+++I++  + + +  ++  KL  E+     + D    N +I G  K G  
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAM--KLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A++FL      G  P   T+  ++ ++ ++GR ++AE +  ++   G  P    +N L
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    + G L  A  ++ +M   G  P+  +Y+ L+  +    + + A   L  M     
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +L      G+     ++L ++ S G  P    YN +ID   K      A+ 
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D M  +G++PD IT+++L+    + G+ D A + F +++  G  P   TYN ++  L 
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  + +     L  M ++   P   TYT L++     G   +A++ L  L  + +
Sbjct: 543 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 14/305 (4%)

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L+  V+ G L+D    +  M   G +PD    + LI  +   G+ + A  V++ +E S A
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +++GY   GE     QVL  M    V PD   YN ++ T      L  AM 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             DR L +   PD IT+  LI+   K     +A +L +EM+ +G  P   TYN++IN + 
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           ++ R ++  + L NM + G  PNV+T+  ++     +GR+ DA + L   SD        
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL---SD-------- 346

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G  PS +  N LIN          A  +L+ M  +G  P+ ++Y  L+    +  K
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406

Query: 642 FHKVF 646
             +  
Sbjct: 407 MDRAI 411



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 192/433 (44%), Gaps = 11/433 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            ++ E   AVP  + +++L +    +  ID A  V   L + N+     + Y+ ++  L 
Sbjct: 172 MEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDV-VTYNTILRTLC 227

Query: 175 RSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            S KL +A  +  RQ      P  +TY  LI A  +   + +A+ L+ +MR  G   D +
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 287

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I  + +  ++D ++  K    +     + +    N ++      G    A + L 
Sbjct: 288 TYNVLINGICKEGRLDEAI--KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS 345

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G SP   T+  +I  L   G    A  + E++   G  P + +YN LL G+ K  
Sbjct: 346 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK 405

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +  A   +  M   G  PD  TY+ L+ A    G+ + A  +L ++      P    Y+
Sbjct: 406 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 465

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G+ +R  ++L EM+  G++PD   Y+ ++    +   +  A+  F  +   
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 525

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P+ IT+N+++    K  + DRA +    M  +   P   TY I+I  +  +   ++ 
Sbjct: 526 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 585

Query: 530 KRLLGNMRAQGLL 542
             LL  + ++GL+
Sbjct: 586 LDLLNELCSRGLV 598


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 202/448 (45%), Gaps = 30/448 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL 252
           T++ LI+   +   L +A +L  +   +G   D   Y+ ++  L +  KI  +  L++K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
                   I     LLN    G  K G   +A+  L      G +P   TY ++I  L  
Sbjct: 61  TANGCTPTIATYNALLN----GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 116

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             R+ EA  +F+E+   GL   T  Y AL++G ++ G +  A  V   M   G +PD  T
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 176

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            S +ID    AGR  +A  + K ME     PN  +YS ++ G     +     ++L +MK
Sbjct: 177 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +   PDT  YN++ID   K   +  A A FD ML  G +PD  T+N LI    K G  D
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 296

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  +F++M      P   TY  +I+ L ++ +         +M+ +G  P+   Y++LV
Sbjct: 297 AACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356

Query: 553 DIYGQSGRFD------DAIE-----------------CLEGLSDQAVNAFRVMRTDGLKP 589
           D   +SG+ +      D +E                 C     D+AV+ F  +R +G+ P
Sbjct: 357 DGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-P 415

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYM 617
              A NS+I+A  +  +  E  AV Q M
Sbjct: 416 HPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 192/404 (47%), Gaps = 9/404 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++  L +++K+ EA  L ++      TP   TYNAL++   +   LE+A++L+ K+ 
Sbjct: 37  YTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 96

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D + Y+ +I  L +  +  S    KL+KE+    + LD      +I G  +AG 
Sbjct: 97  DNGCTPDVVTYTSLIDGLGKKKR--SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGK 154

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          G  P   T + +I  L  +GR   A  +F+ ++  GL P    Y+A
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K   +  A  ++++M+++   PD  TY++LID    +G   +AR    EM  + 
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+ + Y+ +++G+   G       V  +M SS   P+   Y  +I    K   L  A 
Sbjct: 275 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKAS 334

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  M   G  PD+  +++L+D   K G+ +    LF+EM+  G     T   ++ +L 
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLC 394

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +  R ++   L   +R +G +P+   Y +++    +SG+ ++ 
Sbjct: 395 -KANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEG 436



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 166/373 (44%), Gaps = 11/373 (2%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G  KAG   +A          G +    TY  ++  L+ + +  EA A+ E++  +G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    YNALL G  KMG L++A  ++ ++  +G  PD  TY+ LID      R   A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + KEM       ++  Y+ ++ G    G+  +   V K M S G  PD    + MID  
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A+  F  M + G+ P+ + ++ LI    K  + D A E+  +M++    P T
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYNI+I+ L +       +     M   G  P+V TY  L+  +           C  G
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF-----------CKAG 293

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            +D A   F  M +    P+ +   +LI+   + ++  +A    Q+MKE G  PD   Y+
Sbjct: 294 NTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYS 353

Query: 631 TLMKALIRVDKFH 643
           +L+  L +  K  
Sbjct: 354 SLVDGLCKSGKLE 366



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 27/428 (6%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSN- 140
           + +T ++++L++N   + A AL            K+  +        +++LL  LC    
Sbjct: 35  HTYTTIVDWLAKNKKIQEAVALME----------KITANGCTPTIATYNALLNGLCKMGR 84

Query: 141 --SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTP 193
              +IDL   +V      N C    + Y+ LI  LG+ ++ +EA+ L     S+   L  
Sbjct: 85  LEEAIDLLRKIVD-----NGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDT 139

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y ALI    +   + +A ++   M   G   D +  S +I  L +  +I +++  +++
Sbjct: 140 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV--RIF 197

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K +E   +  +  + + +I G  KA     A+  L   +    +P T TY  +I  L  S
Sbjct: 198 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 257

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A A F+E+ E+G KP    YN L+ G+ K G    A  V  +M  S   P+  TY
Sbjct: 258 GDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTY 317

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             LI       +   A +  + M+     P+SF+YS ++ G    G+ +    +  EM+ 
Sbjct: 318 GTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMER 377

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SGV  ++     +I    K N +  A++ F+ +  EG+ P    +N++I    K G+ + 
Sbjct: 378 SGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNE 435

Query: 494 AEELFEEM 501
            + +++EM
Sbjct: 436 GQAVYQEM 443



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 14/282 (4%)

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S+LI+    AG    A  + +E   +    +   Y+ I+       + Q    +++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            ++G  P    YN +++   K   L  A+    +++  G  PD +T+ +LID   K  R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A +LF+EM  RG    T  Y  +I  L +  +      +   M +QG +P+VVT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D   ++GR              AV  F+ M   GL P+ +  ++LI+   + ++   A 
Sbjct: 181 IDGLCKAGRIG-----------AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 229

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            +L  MK+    PD +TY  L+  L    K   V ++  FF+
Sbjct: 230 EMLAQMKKAFCTPDTITYNILIDGLC---KSGDVAAARAFFD 268


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 214/480 (44%), Gaps = 26/480 (5%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L   +YN LI    ++    +AL +  +M  +G       YS ++ +L +  K DS ++ 
Sbjct: 190 LNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGK--KRDSEMVM 247

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L KE+E   +  +       I    +AG   +A          G  P   TY  +I AL
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            N+G+   A+ +F ++K +G KP    Y  LL  +   G L   +   S+ME  G +PD 
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T+++L+D    A  ++ A      M      PN   Y+ ++ G    G  +   ++L  
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+S GV+P  + Y   ID FGK      A+  F++M ++GI P+ +  N  +    + GR
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A+ +F  ++E G  P + TYN+M+    +  + ++   LL  M   G  P+V+   +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 551 LVDIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDG 586
           L+D   ++GR D+A +                          EG   +A+  F  M    
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P+ ++ N+L++ F ++     A  +   M     KPDV+TY T++  LI+ +K +  F
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 222/481 (46%), Gaps = 33/481 (6%)

Query: 166  YSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LG   R +K  E F     ++ +P  +++N L+    +ND++E AL + SKM 
Sbjct: 580  YNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMT 639

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
                  D + Y+ VI  L + NK++ +     +L K +  D + +       ++ G  K 
Sbjct: 640  VMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTI-----CTLLPGLVKC 694

Query: 279  GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA----VF-EELKESGLKP 333
            G    A   + +A+      +     +    L   G  +EAE     +F EEL  +G+  
Sbjct: 695  GQIGDA---ISIARDFMYQVRFRVNRSFWEDLM-GGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 334  RTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIV 392
                   L++   K      A  +  +  +  G+ P   +Y+ LI         E A  +
Sbjct: 751  EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810

Query: 393  LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             K+M+     P++F ++ +LA +   G+    F++ KEM S   +PD   YN++I +  K
Sbjct: 811  FKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAK 870

Query: 453  YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
             N L  A+  F  ++S    P   T+  LID   K GR + A  LFEEM + G  P    
Sbjct: 871  SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930

Query: 513  YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +NI+IN  G+    E   +L   M  +G+ P++ +YT LVD             CL G  
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL-----------CLAGRV 979

Query: 573  DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            D+A+  F  +++ GL P  +A N +IN  G+ QR  EA A+   M+  G+ PD+ TY +L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 633  M 633
            M
Sbjct: 1040 M 1040



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 24/364 (6%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +  ALS  G   +   V  +++++G      +YN L+   ++ G+  +A  V   M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ P   TYS L+ A       E   ++LKEME    +PN + ++  +      G+ 
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              +++ + M   G  PD   Y V+ID       L +A   F +M + G +PD + + TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D     G  D  +E + +M+  GY P   T+ I++++L +   +++       MR QG+
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVN 577
           LPN+ TY TL+    ++GR +DA++ L+                        G + +AV 
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVE 458

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M+  G+ P+ +A N+ + +  E  R  EA  +   ++ENGL PD VTY  +MK   
Sbjct: 459 TFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518

Query: 638 RVDK 641
           +V +
Sbjct: 519 KVGQ 522



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 11/346 (3%)

Query: 287  FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            F    + +G+SP  A+Y  +I  L     T +A  +F+++K  G  P    +N LL  + 
Sbjct: 775  FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834

Query: 347  KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
            K G + +   +  EM      PD  TY+++I + A +   + A     ++  S  +P   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 407  IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
             Y  ++ G    G  +   ++ +EM   G +P+   +N++I+ +GK      A   F RM
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954

Query: 467  LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            ++EGI PD  ++  L+DC    GR D A   F E++  G  P    YN +IN LG+ +R 
Sbjct: 955  VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 527  EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            E+   L   MR +G++P++ TY +L+   G           L G+ +QA   +  ++  G
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLG-----------LAGMVEQAKRMYEELQLAG 1063

Query: 587  LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            L+P     N+LI  +   +    A+ V + M  +G  P++ TY  L
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/540 (22%), Positives = 230/540 (42%), Gaps = 69/540 (12%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I I  LGR+ K+ EA+ + +R   +   P  +TY  LI A      LE A  L  KM+
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 221 -----------------------------------QDGYHCDFINYSLVIQSLTRTNKID 245
                                               DGY  D + +++++  L +    D
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +     +  +    I  +    N +I G  +AG    A++ L   + VG+ P   TY  
Sbjct: 385 EAFAT--FDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYIT 442

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
            I     SG T +A   FE++K  G+ P   A NA L    +MG L++A+ + + +  +G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  TY++++  Y+  G+ + A  +L EM  +  +P+  + + ++      G     +
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q+   MK   + P    YN ++   GK   +  A+  F+ M+ +   P+TI++NTL+DC 
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K    + A ++F +M      P   TYN +I  L ++ +          ++ + + P+ 
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDH 681

Query: 546 VTYTTLVDIYGQSGRFDDAIEC-------------------------LEGLSDQAVNAFR 580
           VT  TL+    + G+  DAI                           +E   D+A+    
Sbjct: 682 VTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL-QYMKENGLKPDVVTYTTLMKALIRV 639
            +  +G+   +  L  L+    + +R+  A+ +  ++ K+ G+ P + +Y  L+  L+ V
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 2/322 (0%)

Query: 192  TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
            T  +YN LI         EKA +L   M+  G   D   +++++    ++ KI    L +
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE--LFE 844

Query: 252  LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            LYKE+   + + D    N VI   AK+ +  KA+ F          P   TY  +I  L+
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              GR  EA  +FEE+ + G KP    +N L+ GY K+G  + A  +   M   G+ PD  
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            +Y++L+D    AGR + A     E++ +   P+   Y+RI+ G       +    +  EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            ++ G+ PD + YN ++   G    +  A   ++ +   G+EPD  T+N LI  +      
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 492  DRAEELFEEMQERGYFPCTTTY 513
            + A  +++ M   G  P   TY
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTY 1106



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 17/314 (5%)

Query: 277  KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
            KA D  K M+       VG +P   T+  ++     SG+  E   +++E+     KP   
Sbjct: 806  KAWDLFKDMK------NVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859

Query: 337  AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             YN ++    K   L  A     ++  S   P   TY  LID  A  GR E A  + +EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 397  EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 KPN  I++ ++ GY   G+ +   Q+ K M + G+ PD   Y +++D       +
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 457  HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
              A+  F+ + S G++PD I +N +I+   K  R + A  L+ EM+ RG  P   TYN +
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 517  INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            +  LG     E  KR+   ++  GL P+V TY  L+  Y  S              + A 
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSEN-----------PEHAY 1088

Query: 577  NAFRVMRTDGLKPS 590
              ++ M  DG  P+
Sbjct: 1089 TVYKNMMVDGCNPN 1102



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 11/313 (3%)

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           AVFE +++  ++     Y  + K     G L+    V+++M ++G + + ++Y+ LI   
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
             +G    A  V + M     KP+   YS ++     + + +    +LKEM+  G+ P+ 
Sbjct: 203 IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV 262

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + + + I   G+   +  A   F RM  EG  PD +T+  LID     G+ + A+ELF +
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVK 322

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M+  G+ P    Y  +++   +    +  K     M A G +P+VVT+T LVD+  ++  
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
           FD+A              F VMR  G+ P+    N+LI       R  +A  +L  M+  
Sbjct: 383 FDEAFA-----------TFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431

Query: 621 GLKPDVVTYTTLM 633
           G++P   TY T +
Sbjct: 432 GVQPTAYTYITFI 444



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 58/519 (11%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQD 222
           LYS+    +GR  +    F   +   L P  +TYN ++   ++   +++A+NL+S+M ++
Sbjct: 479 LYSL--AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   D I  + +I SL +  ++D +   +++  ++  K+       N ++ G  K G   
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEA--WQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQ 594

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KA+           SP T ++  ++     +     A  +F ++     KP    YN ++
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE-MEVSHA 401
            G +K   +  A +   ++++S + PD  T   L+      G+   A  + ++ M     
Sbjct: 655 YGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI-------------- 447
           + N   +  ++ G     E  +     +E+  +G+  +  F   ++              
Sbjct: 714 RVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQ 773

Query: 448 --DTFGK----------YNCL-------HHAMAAFD---RMLSEGIEPDTITWNTLIDCH 485
             D F K          YNCL       H+   A+D    M + G  PD  T+N L+  H
Sbjct: 774 IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+     EL++EM  R   P   TYNI+I+ L +    +       ++ +    P  
Sbjct: 834 GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            TY  L+D   + GR ++A+   E +SD            G KP+    N LIN +G+  
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDY-----------GCKPNCAIFNILINGYGKIG 942

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDK 641
               A  + + M   G++PD+ +YT L+  L    RVD+
Sbjct: 943 DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDE 981



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/532 (20%), Positives = 226/532 (42%), Gaps = 22/532 (4%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
            P  + ++++    S    +D A  ++S + + N C    ++ + LI +L   GR ++ ++
Sbjct: 505  PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR-NGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563

Query: 182  AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             F   +  +L+P  +TYN L+S   +   ++KA+ L   M       + I+++ ++    
Sbjct: 564  MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFC 623

Query: 240  RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            + ++++ +L  K++ ++     + D    N VI G  K    + A  F    +   + P 
Sbjct: 624  KNDEVELAL--KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPD 680

Query: 300  TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T   ++  L   G+  +A ++  + + +   +     +  L+ G +    +  A    
Sbjct: 681  HVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFA 740

Query: 359  SEMERSGVLPDEHTYSLLIDAYANAGRWESA-RIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             E+  +G+  ++     L+       R   A +I  K  +     P    Y+ ++    +
Sbjct: 741  EELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLE 800

Query: 418  RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                ++ + + K+MK+ G  PD   +N+++   GK   +      +  M+S   +PD IT
Sbjct: 801  VHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAIT 860

Query: 478  WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            +N +I    K    D+A + F ++    + P   TY  +I+ L +  R E+  RL   M 
Sbjct: 861  YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920

Query: 538  AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
              G  PN   +  L++ YG+ G            ++ A   F+ M  +G++P   +   L
Sbjct: 921  DYGCKPNCAIFNILINGYGKIGD-----------TETACQLFKRMVNEGIRPDLKSYTIL 969

Query: 598  INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            ++      R  EA      +K  GL PD + Y  ++  L +  +  +  + Y
Sbjct: 970  VDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 124/293 (42%), Gaps = 11/293 (3%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++D   V   M++  +  D  TY  +  A +  G       VL +M  +    N++ Y+ 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++      G      +V + M S G++P    Y+ ++   GK       M     M   G
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P+  T+   I    + G+ D A E+F  M + G  P   TY ++I+ L    + E+ K
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   M+A G  P+ V Y TL+D +   G  D   E            +  M  DG  P 
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE-----------FWSQMEADGYMPD 366

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            +    L++   + +   EAFA    M++ G+ P++ TY TL+  L+R  +  
Sbjct: 367 VVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIE 419



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 107/534 (20%), Positives = 215/534 (40%), Gaps = 24/534 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           +P  +  ++L ++       D A+A    ++K  +  +    Y+ LI  L R+ ++ +A 
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHT-YNTLICGLLRAGRIEDAL 422

Query: 184 LL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
            L     S   + T  TY   I    ++ +  KA+    KM+  G   + +  +  + SL
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
               ++  +  + ++  +  + +  D    N ++  ++K G   +A+  L      G  P
Sbjct: 483 AEMGRLREA--KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEP 540

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
                 ++I +L  +GR  EA  +F+ +K+  L P    YN LL G  K G ++ A  + 
Sbjct: 541 DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M      P+  +++ L+D +      E A  +  +M V   KP+   Y+ ++ G    
Sbjct: 601 ESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA-AFDRMLSEGIEPDTIT 477
            +    F    ++K S + PD      ++    K   +  A++ A D M       +   
Sbjct: 661 NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM- 536
           W  L+         D+A    EE+   G     +    ++ +L + +R     ++     
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFT 779

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-GLSDQAVNAFRVMRTDGLKPSNLALN 595
           +  G+ P + +Y  L+             E LE   +++A + F+ M+  G  P     N
Sbjct: 780 KKLGISPTLASYNCLIG------------ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            L+   G+  +  E F + + M     KPD +TY  ++ +L + +   K    +
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 13/243 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  I      RG  ++   VL +M+ +G   + + YN +I    +      A+  + RM+
Sbjct: 160 YLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 219

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           SEG++P   T++ L+    K    +    L +EM++ G  P   T+ I I +LG   + +
Sbjct: 220 SEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKID 279

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   +   M  +G  P++VTYT L+D    +G+ ++A E            F  M+ +G 
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKE-----------LFVKMKANGH 328

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVL-QYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           KP  +   +L++ F  D  D + F      M+ +G  PDVVT+T L+  L +   F + F
Sbjct: 329 KPDQVIYITLLDKF-NDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 647 SSY 649
           +++
Sbjct: 388 ATF 390



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 16/163 (9%)

Query: 491 YDRAEEL---FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           +D+ E++   FE MQ++       TY  +   L  +     +  +L  MR  G + N  +
Sbjct: 135 HDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYS 194

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+ +  QSG   +A+E            +R M ++GLKPS    ++L+ A G+ +RD
Sbjct: 195 YNGLIHLLIQSGFCGEALE-----------VYRRMVSEGLKPSLKTYSALMVALGK-KRD 242

Query: 608 AEAFAVL-QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +E   VL + M++ GL+P+V T+T  ++ L R  K  + +  +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIF 285


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 211/449 (46%), Gaps = 24/449 (5%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           + P T  +LI    R    +KA  +M  + Q G   D I Y+++I    ++ +ID++L  
Sbjct: 92  IIPCT--SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNAL-- 147

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
              + ++   +  D    N ++     +G   +AM  L         P   TY  +I A 
Sbjct: 148 ---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEAT 204

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
                  +A  + +E++  G KP    YN L+ G  K G L +A   ++ M   G  P+ 
Sbjct: 205 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 264

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            T+++++ +  + GRW  A  +L +M      P+   ++ ++     +G   R   +L++
Sbjct: 265 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 324

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  P++  YN ++  F K   +  A+   D M+S G  PD +T+NTL+    K G+
Sbjct: 325 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 384

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            D A E+  ++  +G  P   TYN +I+ L +  + E   +LL  MR +GL P+++TY++
Sbjct: 385 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSS 444

Query: 551 LVDIYGQSGRFDDAIEC---LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           LV    + G+ D+AI+    LEGL              G++P+ +  NS++    + ++ 
Sbjct: 445 LVSGLSREGKVDEAIKFFHDLEGL--------------GIRPNAITYNSIMLGLCKSRQT 490

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             A   L YM     KP   TYT L++ +
Sbjct: 491 DRAIDFLAYMISKRCKPTEATYTILIEGI 519



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 14/320 (4%)

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E +   G  P      +L++G+ ++G  K A +V+  +E+SG +PD  TY++LI  Y  
Sbjct: 80  LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 139

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G  ++A  VL  M V+   P+   Y+ IL    D G+ ++  +VL         PD   
Sbjct: 140 SGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 196

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y ++I+   K + +  AM   D M ++G +PD +T+N LI+   K GR D A +    M 
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 256

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   T+NI++  +    RW D ++LL +M  +G  P+VVT+  L++         
Sbjct: 257 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL------- 309

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C +GL  +A++    M   G  P++L+ N L++ F ++++   A   L  M   G 
Sbjct: 310 ----CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 623 KPDVVTYTTLMKALIRVDKF 642
            PD+VTY TL+ AL +  K 
Sbjct: 366 YPDIVTYNTLLTALCKDGKV 385



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 177/399 (44%), Gaps = 30/399 (7%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             + G+     +FL      G  P      ++I      G+T +A  V E L++SG  P 
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN L+ GY K G + +A  V   ++R  V PD  TY+ ++    ++G+ + A  VL 
Sbjct: 127 VITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
                   P+   Y+ ++          +  ++L EM++ G +PD   YNV+I+   K  
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A+   + M S G +P+ IT N ++      GR+  AE+L  +M  +G  P   T+N
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------- 566
           I+IN L  Q        +L  M   G  PN ++Y  L+  + +  + D AIE        
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 567 ----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                           C +G  D AV     + + G  P  +  N++I+   +  +   A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             +L  M+  GLKPD++TY++L+  L R   VD+  K F
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 196/435 (45%), Gaps = 16/435 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            RN +LE     +  M   G   D I  + +I+   R  K   +    + + +E      
Sbjct: 68  VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATW--VMEILEQSGAVP 125

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ K+G+   A++ L     + ++P   TY  ++  L +SG+  +A  V 
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVL---DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +   +    P    Y  L++   K   +  A  ++ EM   G  PD  TY++LI+     
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L  M     +PN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G  P+++++N L+    K  + DRA E  + M  
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 362

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN ++  L +  + +    +L  + ++G  P ++TY T++D   + G+ + 
Sbjct: 363 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 422

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           AI+ L+            MR  GLKP  +  +SL++    + +  EA      ++  G++
Sbjct: 423 AIKLLDE-----------MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR 471

Query: 624 PDVVTYTTLMKALIR 638
           P+ +TY ++M  L +
Sbjct: 472 PNAITYNSIMLGLCK 486



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 191/415 (46%), Gaps = 4/415 (0%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + Y++LI    +S ++  A  +  R  + P  +TYN ++     +  L++A+ ++ +  Q
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
              + D I Y+++I++  + + +  ++  KL  E+     + D    N +I G  K G  
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAM--KLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A++FL      G  P   T+  ++ ++ ++GR ++AE +  ++   G  P    +N L
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    + G L  A  ++ +M   G  P+  +Y+ L+  +    + + A   L  M     
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +L      G+     ++L ++ S G  P    YN +ID   K      A+ 
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D M  +G++PD IT+++L+    + G+ D A + F +++  G  P   TYN ++  L 
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  + +     L  M ++   P   TYT L++     G   +A++ L  L  + +
Sbjct: 486 KSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 14/305 (4%)

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L+  V+ G L+D    +  M   G +PD    + LI  +   G+ + A  V++ +E S A
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +++GY   GE     QVL  M    V PD   YN ++ T      L  AM 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             DR L +   PD IT+  LI+   K     +A +L +EM+ +G  P   TYN++IN + 
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           ++ R ++  + L NM + G  PNV+T+  ++     +GR+ DA + L   SD        
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL---SD-------- 289

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G  PS +  N LIN          A  +L+ M  +G  P+ ++Y  L+    +  K
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349

Query: 642 FHKVF 646
             +  
Sbjct: 350 MDRAI 354



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 192/433 (44%), Gaps = 11/433 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            ++ E   AVP  + +++L +    +  ID A  V   L + N+     + Y+ ++  L 
Sbjct: 115 MEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDV-VTYNTILRTLC 170

Query: 175 RSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
            S KL +A  +  RQ      P  +TY  LI A  +   + +A+ L+ +MR  G   D +
Sbjct: 171 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 230

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I  + +  ++D ++  K    +     + +    N ++      G    A + L 
Sbjct: 231 TYNVLINGICKEGRLDEAI--KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLS 288

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G SP   T+  +I  L   G    A  + E++   G  P + +YN LL G+ K  
Sbjct: 289 DMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEK 348

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +  A   +  M   G  PD  TY+ L+ A    G+ + A  +L ++      P    Y+
Sbjct: 349 KMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 408

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G+ +R  ++L EM+  G++PD   Y+ ++    +   +  A+  F  +   
Sbjct: 409 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 468

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P+ IT+N+++    K  + DRA +    M  +   P   TY I+I  +  +   ++ 
Sbjct: 469 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 528

Query: 530 KRLLGNMRAQGLL 542
             LL  + ++GL+
Sbjct: 529 LDLLNELCSRGLV 541


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 215/463 (46%), Gaps = 36/463 (7%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKI 261
           AR DD+      M ++R +      + Y+ ++ S  +  + D  S LL+++  E +    
Sbjct: 216 ARWDDVRAVYGEMLQLRVEP---TIVTYNTLLDSFLKEGRKDEASMLLKEM--ETQGGGF 270

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA--TYAAVITALSNSGRTIEA 319
            L+    N VI   A+ G    A++   +   + LS K +  TY  +ITAL   G   +A
Sbjct: 271 SLNDVTFNVVISFLAREGHLENAVK---LVDSMRLSKKASSFTYNPLITALLERGFVRKA 327

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           EA+  E++  G+ P    YNA++ G +K    + A+   +EM   G+LPD  TY+ L++ 
Sbjct: 328 EALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNR 387

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           Y  AG  + A  +L ++  +   P    Y+ ++ GY   G+     ++ +EM   G  PD
Sbjct: 388 YCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPD 447

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              Y ++++   K   L  A   FD MLS+G++PD   +NT I           A +L E
Sbjct: 448 VCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLRE 507

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M  +G +P T TYN++I+ L +    +D KRL   M + GL P+ +TYT L+  + + G
Sbjct: 508 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERG 567

Query: 560 RFDDAIECLEGL-SD-----------------------QAVNAFRVMRTDGLKPSNLALN 595
              +A + L G+ SD                        A   FR M   G++P+ +  N
Sbjct: 568 LLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 627

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            LI+A     R   AF     M E GL P+  TYT L+    R
Sbjct: 628 VLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCR 670



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 217/488 (44%), Gaps = 29/488 (5%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM--RQDGYHCDFINYSLVIQSLTRT 241
           +L  R   T +TYN L+ +  +    ++A  L+ +M  +  G+  + + +++VI  L R 
Sbjct: 228 MLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLARE 287

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             +++++  KL   +   K +      N +I    + G   KA       +  G+ P   
Sbjct: 288 GHLENAV--KLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVV 344

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY A+I  L    +   A+  F E++  GL P    YN+LL  Y K G LK+A +++ ++
Sbjct: 345 TYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDL 404

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            R+G+ P   TY+ LID Y   G    AR + +EM      P+   Y+ ++ G R     
Sbjct: 405 RRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNL 464

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +   EM S G++PD   YN  I      +    A    + M+ +GI PDT+T+N +
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K G    A+ L  +M   G  P   TY  +I+   E+    + ++LL  M + GL
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584

Query: 542 LPNVVTYTTLV-------DIYGQSGRF----DDAIE-------------CLEGLSDQAVN 577
            P+VVTYT LV       ++Y   G F    D  IE             C+ G +  A  
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFR 644

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M   GL P+      LI+    +   A+A  +   M +NG+ PD  T+  L K   
Sbjct: 645 HFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFD 704

Query: 638 RVDKFHKV 645
               +H +
Sbjct: 705 EGHMYHAI 712



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 187/463 (40%), Gaps = 53/463 (11%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  +T+N +IS  AR   LE A+ L+  MR       F    L+   L R     +  LQ
Sbjct: 272 LNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQ 331

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
               E+E + I       N +I G  K   A  A       + +GL P   TY +++   
Sbjct: 332 M---EMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRY 388

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             +G   EA  +  +L+ +GL P    YN L+ GY ++G L +A  +  EM   G  PD 
Sbjct: 389 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDV 448

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY++L++          AR    EM     +P+ F Y+  +            FQ+ + 
Sbjct: 449 CTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREV 508

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G+ PDT  YNV+ID   K   L  A     +M+S+G++PD IT+  LI  H + G 
Sbjct: 509 MMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGL 568

Query: 491 YDRAEEL-----------------------------------FEEMQERGYFPCTTTYNI 515
              A +L                                   F +M + G  P   TYN+
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNV 628

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L    R     R    M  +GL PN  TYT L+D   + G + DAI          
Sbjct: 629 LIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR--------- 679

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
              +  M  +G+ P     N+L   F E       +  ++YM+
Sbjct: 680 --LYFEMHQNGIPPDYCTHNALFKGFDE----GHMYHAIEYME 716



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 187/417 (44%), Gaps = 19/417 (4%)

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM--AQGVGLSPKTATYAAV 306
           ++ +Y E+   ++E      N ++  F K G   +A   L     QG G S    T+  V
Sbjct: 221 VRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVV 280

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I+ L+  G    A  + + ++ S  K  +  YN L+   ++ G+++ AE +  EME  G+
Sbjct: 281 ISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGI 339

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           +P   TY+ +I       + E+A++   EM      P+   Y+ +L  Y   G  +    
Sbjct: 340 MPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALW 399

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L +++ +G+ P    YN +ID + +   L  A    + M+ +G  PD  T+  L++   
Sbjct: 400 LLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSR 459

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K      A E F+EM  +G  P    YN  I             +L   M  +G+ P+ V
Sbjct: 460 KVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTV 519

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  ++D   ++G   DA    + L  + V       +DGL+P  +    LI+A  E   
Sbjct: 520 TYNVIIDGLCKTGNLKDA----KRLKTKMV-------SDGLQPDCITYTCLIHAHCERGL 568

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGE 663
             EA  +L  M  +GL+P VVTYT L+    R      ++S+Y +F   KML    E
Sbjct: 569 LREARKLLNGMVSDGLQPSVVTYTILVHTCCRRG---NLYSAYGWFR--KMLDVGIE 620



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 14/346 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+  L ++ R  +  AV+ E+ +  ++P    YN LL  ++K G   +A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 355 EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ EME    G   ++ T++++I   A  G  E+A  ++  M +S  K +SF Y+ ++
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLI 315

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
               +RG  ++   +  EM++ G+ P    YN +I    K      A   F  M + G+ 
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+L++ + K G    A  L  +++  G  P   TYN +I+         + +RL
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  QG  P+V TYT L++  G     + A+         A   F  M + GL+P   
Sbjct: 436 KEEMVEQGCFPDVCTYTILMN--GSRKVRNLAM---------AREFFDEMLSKGLQPDCF 484

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A N+ I A         AF + + M   G+ PD VTY  ++  L +
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCK 530



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 47/241 (19%)

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV PD    N ++             A +  ML   +EP  +T+NTL+D   K GR D A
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 495 EELFEEM--QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA-------------- 538
             L +EM  Q  G+     T+N++I+ L  +   E+  +L+ +MR               
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLIT 316

Query: 539 --------------------QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                               +G++P VVTY  +  I+G        ++C +  + Q    
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAI--IHG-------LLKCEQAEAAQV--K 365

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  MR  GL P  +  NSL+N + +     EA  +L  ++  GL P V+TY TL+    R
Sbjct: 366 FAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 425

Query: 639 V 639
           +
Sbjct: 426 L 426



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 14/189 (7%)

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           C    +AAF  +   G+ PD    N ++       R+D    ++ EM +    P   TYN
Sbjct: 182 CSTLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYN 241

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +++   ++ R ++   LL  M  Q  G   N VT+  ++    + G  ++A+       
Sbjct: 242 TLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAV------- 294

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            + V++ R+ +    K S+   N LI A  E     +A A+   M+  G+ P VVTY  +
Sbjct: 295 -KLVDSMRLSK----KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAI 349

Query: 633 MKALIRVDK 641
           +  L++ ++
Sbjct: 350 IHGLLKCEQ 358


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N VI    + G   +A   L + +  G +P   +Y+ V+      G   +   + E +K 
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GLKP +  Y +++    ++  L +AE   SEM R G+LPD   Y+ LID +   G   +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A     EM      P+   Y+ I++G+   G+     ++  EM   G+EPD+  +  +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + K   +  A    + M+  G  P+ +T+ TLID   K G  D A EL  EM + G  P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN ++N L +    E+  +L+G   A GL  + VTYTTL+D Y +SG  D A E L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                      + M   GL+P+ +  N L+N F       +   +L +M   G+ P+  T
Sbjct: 550 -----------KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598

Query: 629 YTTLMK 634
           + +L+K
Sbjct: 599 FNSLVK 604



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 7/407 (1%)

Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y  +I  L R  KL EA   F    RQ + P  + Y  LI    +  D+  A     +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                  D + Y+ +I    +    D     KL+ E+ C  +E D     ++I G+ KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIG--DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A R        G SP   TY  +I  L   G    A  +  E+ + GL+P    YN
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +++ G  K G +++A  +V E E +G+  D  TY+ L+DAY  +G  + A+ +LKEM   
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P    ++ ++ G+   G  +   ++L  M + G+ P+   +N ++  +   N L  A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            A +  M S G+ PD  T+  L+  H K      A  LF+EM+ +G+    +TY+++I  
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
             +++++ + + +   MR +GL  +   +    D   +  R D  ++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 70/503 (13%)

Query: 166 YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+IH    LGR ++ +   LL + +  TP  ++Y+ +++   R  +L+K   L+  M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y  +I  L R  K+  +  ++ + E+    I  D  +   +I GF K GD
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEA--EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A +F        ++P   TY A+I+     G  +EA  +F E+   GL+P +  +  
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K G++KDA  V + M ++G  P+  TY+ LID     G  +SA  +L EM    
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 401 AKPNSFIYSRILAG-----------------------------------YRDRGEWQRTF 425
            +PN F Y+ I+ G                                   Y   GE  +  
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++LKEM   G++P    +NV+++ F  +  L       + ML++GI P+  T+N+L+  +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                   A  ++++M  RG  P   TY  ++    +    ++   L   M+ +G   +V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            TY+ L+  + +  +F +A E            F  MR +GL                  
Sbjct: 667 STYSVLIKGFLKRKKFLEARE-----------VFDQMRREGLAA---------------- 699

Query: 606 RDAEAFAVLQYMKENGLKPDVVT 628
            D E F      K  G +PD + 
Sbjct: 700 -DKEIFDFFSDTKYKGKRPDTIV 721



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 44/464 (9%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS-------- 246
           +YN +I    +   +++A +L+  M   GY  D I+YS V+    R  ++D         
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 247 ----------------SLLQKLYKEIECDK---------IELDGQLLNDVIVGFAKAGDA 281
                            LL ++ K  E ++         I  D  +   +I GF K GD 
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             A +F        ++P   TY A+I+     G  +EA  +F E+   GL+P +  +  L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY K G++KDA  V + M ++G  P+  TY+ LID     G  +SA  +L EM     
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN F Y+ I+ G    G  +   +++ E +++G+  DT  Y  ++D + K   +  A  
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
               ML +G++P  +T+N L++     G  +  E+L   M  +G  P  TT+N ++    
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            +   +    +  +M ++G+ P+  TY  LV  +           C      +A   F+ 
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH-----------CKARNMKEAWFLFQE 656

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           M+  G   S    + LI  F + ++  EA  V   M+  GL  D
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKD 353
           G  P+   +      L + G   EA  VFE++   GL     + N  L    K  Y    
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V  E    GV  +  +Y+++I      GR + A  +L  ME+    P+   YS ++ 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   GE  + +++++ MK  G++P+++ Y  +I    +   L  A  AF  M+ +GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DT+ + TLID   K G    A + F EM  R   P   TY  +I+   +     +  +L 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M  +GL P+ VT+T L++ Y ++G   DA                          C E
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  D A      M   GL+P+    NS++N   +     EA  ++   +  GL  D VTY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529

Query: 630 TTLMKALIR---VDKFHKVFSSYL 650
           TTLM A  +   +DK  ++    L
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEML 553


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 203/460 (44%), Gaps = 15/460 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++        +  AL ++ +M   G       Y +++++  R+    +S+  ++ +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV--RVLE 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +      LD    N V+    + G   +A+  L      G      +Y AV+  L  + 
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  + E + +E+      P    +N L+    + G  +    V+++M   G  PD   Y+
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +ID     G  E A  +L  M     KPN   Y+ +L G      W+   ++L EM   
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
               D   +N+++D F +   +   +   ++MLS G  PD IT+ T+I+   K G  D A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L + M   G  P T +Y I++  L    RW D + L+  M  QG  PN VT+ TL++ 
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +GL +QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L
Sbjct: 471 L-----------CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             M   G+ P+ + Y+++  AL R  + +KV    +F NI
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQ--MFDNI 557



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 207/468 (44%), Gaps = 26/468 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  Y+ ++ A  R+     ++ ++  M   G   D  N +LV+ ++     +D ++   L
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV--GL 203

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +++     E D    N V+ G   A         +     V  +P   T+  +I  L  
Sbjct: 204 LRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCR 263

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G       V  ++ E G  P  + Y  ++ G  K G+L+ A  +++ M   G+ P+   
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ ++    +A RW+ A  +L EM       +   ++ ++  +   G   R  ++L++M 
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G  PD   Y  +I+ F K   +  A+     M S G +P+T+++  ++      GR+ 
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEEL  +M ++G  P   T+N +IN L ++   E    LL  M   G  P++++Y+T++
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 553 DIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLK 588
           D  G++G+ ++A+E L                        EG  ++ +  F  ++   ++
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +  N++I++  +      A     YM  NG  P+  TYT L+K L
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 185/460 (40%), Gaps = 48/460 (10%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N +++A      +++A+ L+ K+   G   D ++Y+ V++ L    +     +++L  E+
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGD--VEELMDEM 242

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                  +    N +I    + G   +    L      G +P    YA +I  +   G  
Sbjct: 243 VRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHL 302

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS------------ 364
             A  +   +   GLKP    YN +LKG       K+AE ++SEM +             
Sbjct: 303 EVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL 362

Query: 365 -----------------------GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
                                  G +PD  TY+ +I+ +   G  + A ++LK M     
Sbjct: 363 VDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGC 422

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KPN+  Y+ +L G    G W    +++ +M   G  P+   +N +I+   K   +  A+ 
Sbjct: 423 KPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE 482

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
              +ML  G  PD I+++T+ID   K G+ + A EL   M  +G  P T  Y+ +   L 
Sbjct: 483 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALS 542

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            + R   V ++  N++   +  + V Y  ++              C    +D+A++ F  
Sbjct: 543 REGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL-----------CKRWETDRAIDFFAY 591

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           M ++G  P+      LI     +    EA  +L  +   G
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 184/419 (43%), Gaps = 9/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++++LK LC +    D+   +   ++    C    + ++ LI  L R+   E+++E    
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 TP    Y  +I    +   LE A  ++++M   G   + + Y+ V++ L    +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  ++L  E+      LD    N ++  F + G   + +  L      G  P   TY
Sbjct: 337 WKEA--EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI      G   EA  + + +   G KP T +Y  +LKG    G   DAE ++S+M +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+ + 
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N +I 
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    DRA + F  M   G  P  +TY ++I  L  +   ++ + LL  + ++G L
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 176/396 (44%), Gaps = 6/396 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI    RN   E+   ++++M + G   D   Y+ +I  + +   ++ +   ++ 
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA--NEIL 309

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +    ++ +    N V+ G   A    +A   L             T+  ++     +
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G       + E++   G  P    Y  ++ G+ K G + +A  ++  M   G  P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++++    +AGRW  A  ++ +M      PN   ++ ++     +G  ++  ++LK+M  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PD   Y+ +ID  GK      A+   + M+++GI P+TI ++++     + GR ++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL--LGNMRAQGLLPNVVTYTTL 551
             ++F+ +++         YN +I+ L   +RWE  + +     M + G +PN  TYT L
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLC--KRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +      G   +A E L  L  +      +MR  G+
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 11/340 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P   +Y+ VI      G   +   + +E++  GLKP    YN+++    K G + DA
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E V+ EM   G++PD   Y+ LID +   G  ++A  +  EME     P+   Y+ ++ G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G+     +V  +M S GVEPD   Y  +ID + K   +  A +  ++M+  G+ P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  L D   K G+ D A EL  EM  +G      TYN ++N L +        +L+ 
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G+ P+ +T+TTL+D Y ++G    A E L  + D+           GL+P+ +  
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR-----------GLQPTVITF 293

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           N L+N F       +   +L +M E G+ P+  TY +LMK
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK 333



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 13/405 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D ++YS VI       ++   L  KL +E++   ++ +    N +I+   K+G    A R
Sbjct: 9   DVVSYSTVINGYCLGGELQKVL--KLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G+ P T  Y  +I      G    A  +F+E+++  + P   AY A++ G  
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G + +A+ V ++M   GV PDE TY+ LID Y  +G  E A  +  +M  S   PN  
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ +  G    G+     ++L EM   G++ +   YN +++   K   +  A+   + M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G+ PDTIT+ TL+D + K G   +A EL  EM +RG  P   T+N+++N        
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ED +RLL  M  +G++PN  TY +L+  Y           C+          ++ M   G
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQY-----------CIRNNMRCTTEIYKGMCARG 355

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           + P +   N LI    + +   EA+ + + M E G      +Y +
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 183/371 (49%), Gaps = 2/371 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++Y+ +I+      +L+K L L+ +M+  G   +   Y+ +I  L ++ K+D +  +++ 
Sbjct: 11  VSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA--ERVL 68

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    I  D  +   +I GF K G+   A +     +   + P    Y AVI  L   
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+ +EA+ VF ++   G++P    Y  L+ GY K G ++ A  + ++M +SG+ P+  TY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L D     G+ ++A  +L EM     + N   Y+ ++ G    G  ++  ++++EM+ 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G+ PDT  +  ++D + K   +  A      ML  G++P  IT+N L++     G  + 
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            E L   M E+G  P TTTYN ++     +        +   M A+G++P+  TY  L+ 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 554 IYGQSGRFDDA 564
            + ++    +A
Sbjct: 369 GHCKARNMKEA 379



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 198/420 (47%), Gaps = 12/420 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I  L +S K+ +A  + +    Q + P  + Y  LI    +  +++ A  L  +M 
Sbjct: 48  YNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEME 107

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     DFI Y+ VI  L R  K+  +   K++ ++    +E D      +I G+ K+G+
Sbjct: 108 KQRIVPDFIAYTAVICGLCRCGKMMEA--DKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA          GL+P   TY A+   L   G+   A  +  E+   GL+     YN+
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G ++ A  ++ EME +G+ PD  T++ L+DAY   G    A  +L+EM    
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P    ++ ++ G+   G  +   ++L  M   G+ P+T  YN ++  +   N +    
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTT 345

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  M + G+ PD+ T+N LI  H K      A  L +EM E+G+    ++YN +I   
Sbjct: 346 EIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGF 405

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV-NAF 579
            ++++  + + L   MR +G+  +   Y   VDI    G  + A+E    L D+A+ N F
Sbjct: 406 FKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALE----LCDEAIENCF 461



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 152/311 (48%), Gaps = 11/311 (3%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +K  G  P   +Y+ ++ GY   G L+    ++ EM+  G+ P+ +TY+ +I     +G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  VL+EM      P++ +Y+ ++ G+   G  Q  +++  EM+   + PD   Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I    +   +  A   F++M S G+EPD +T+ TLID + K G  ++A  L  +M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TY  + + L +  + +    LL  M  +GL  N+ TY +LV+   +SG      
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI---- 236

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                   QAV     M   G+ P  +   +L++A+ +     +A  +L+ M + GL+P 
Sbjct: 237 -------RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPT 289

Query: 626 VVTYTTLMKAL 636
           V+T+  LM   
Sbjct: 290 VITFNVLMNGF 300



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 11/284 (3%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+  G  PD  +YS +I+ Y   G  +    +++EM++   KPN + Y+ I+      G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                +VL+EM + G+ PDT  Y  +ID F K   +  A   FD M  + I PD I +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    +CG+   A+++F +M  RG  P   TY  +I+   +    E    L   M   G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L PNVVTYT L D   + G+ D A E L  +  +           GL+ +    NSL+N 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGK-----------GLQLNICTYNSLVNG 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             +     +A  +++ M+  G+ PD +T+TTLM A  +  +  K
Sbjct: 230 LCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK 273



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 11/178 (6%)

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  PD ++++T+I+ +   G   +  +L +EMQ +G  P   TYN +I LL +  + +D 
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           +R+L  M  QG++P+ V YTTL+D + + G    A +  + +  Q +            P
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRI-----------VP 113

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             +A  ++I       +  EA  V   M   G++PD VTYTTL+    +  +  K FS
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS 171



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 11/114 (9%)

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M+ +G  P+VV+Y+T+++ Y           CL G   + +   + M+  GLKP+    N
Sbjct: 1   MKFRGDAPDVVSYSTVINGY-----------CLGGELQKVLKLIQEMQMKGLKPNLYTYN 49

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           S+I    +  +  +A  VL+ M   G+ PD V YTTL+    ++      +  +
Sbjct: 50  SIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLF 103


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 222/505 (43%), Gaps = 21/505 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           ++ LL  LC     +  +  +++ + K  +C S    ++I I  L R   L  A  +   
Sbjct: 219 FNKLLHTLCKK-GEVQESERLLNKVLKKGMC-SNLFTFNIFIQGLCRKGMLSGAMSMLDS 276

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R+ LTP  +TYN LI    +N ++ +A   + K+   G   D   Y+ +I    +   
Sbjct: 277 VIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGM 336

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           + ++  +K+ +   C     D      +I G  +  +  +A+     A G GL P    Y
Sbjct: 337 LQNA--EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G  ++A  +  E+ E+G       YN ++ G  KMG + DA  ++++   
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PD  T++ LID Y    + E+   +L +M      P+   Y+ +L G     + + 
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +  + M   G  P+   YN++ ++  K   ++ A+   D +L++GI PDT+++ T+I 
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                G    A +LF  M E+     TT TYNIMIN   E+      ++L   M A G  
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+  TY  ++D +           C+ G +D        M   G  PS      +IN   
Sbjct: 635 PDTYTYRVMIDGF-----------CITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLC 683

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVV 627
              R  EA  ++ +M  NG+ P+VV
Sbjct: 684 VQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 242/531 (45%), Gaps = 26/531 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL-LYSILIHAL 173
           F+  + Y   P+ L ++ + N+   +     A+ V  +L+  N+    ++  ++I I + 
Sbjct: 99  FERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKV--FLRMKNVGIVPDVYTFTIRIKSF 156

Query: 174 GRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            R+++ + A      ++SQ  +L  + Y  +++     +   +A  L + M + G   D 
Sbjct: 157 CRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDV 216

Query: 229 INYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
             ++ ++ +L +  ++  S  LL K+ K+  C  +       N  I G  + G  S AM 
Sbjct: 217 STFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNL----FTFNIFIQGLCRKGMLSGAMS 272

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      GL+P   TY  +I  L  +   +EAE    +L   GL+P    YN L+ GY 
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYC 332

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           KMG L++AE ++      G +PDE TY  LI+        + A  +         KP   
Sbjct: 333 KMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVI 392

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +Y+ ++ G    G   +  Q++ EM  +G   D   YN++I+   K  C+  A    +  
Sbjct: 393 LYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDA 452

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +++G  PD  T+NTLID + K  + +   ++  +M   G  P   TYN ++N L +  + 
Sbjct: 453 IAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKN 512

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ED+      M  +G +PN +TY  L +   ++G+ ++A++    L D+ +N        G
Sbjct: 513 EDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD----LVDEILN-------KG 561

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN-GLKPDVVTYTTLMKAL 636
           + P  ++  ++I+ F  +     A+ + + M E   +     TY  ++ A 
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 222/489 (45%), Gaps = 21/489 (4%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNL 215
           LL  + I A+   GR  K+ EA  + +R        + L+YNA+++    +   ++A  +
Sbjct: 74  LLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKV 133

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
             +M+  G   D   +++ I+S  RT +  S+L  +L   +     +L+      V+ GF
Sbjct: 134 FLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSAL--RLLNNMVSQGCQLNAVAYCTVVAGF 191

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +     +A         +G+ P  +T+  ++  L   G   E+E +  ++ + G+    
Sbjct: 192 YEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNL 251

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             +N  ++G  + G L  A  ++  + R G+ PD  TY+ LI           A   L +
Sbjct: 252 FTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHK 311

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +     +P+ F Y+ ++ GY   G  Q   ++L+     G  PD   Y  +I+   + + 
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+A F+  L +G++P  I +N LI    + G   +A ++  EM E G      TYN+
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +IN L +     D   L+ +  A+G +P+V T+ TL+D Y +  + +  I+ L       
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK----- 486

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M + G+ P  +  NS++N   +  ++ +     + M E G  P+ +TY  L ++
Sbjct: 487 ------MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTES 540

Query: 636 LIRVDKFHK 644
           L +  K ++
Sbjct: 541 LCKAGKVNE 549



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 163/361 (45%), Gaps = 3/361 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TY +LI+   +ND++++AL L +     G     I Y+++I+ L +   I  +L  ++ 
Sbjct: 357 FTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL--QMM 414

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+  +    D    N VI G  K G  S A   +  A   G  P   T+  +I      
Sbjct: 415 NEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +      +  ++   G+ P    YN++L G  K    +D       M   G +P++ TY
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITY 534

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L ++   AG+   A  ++ E+      P++  ++ I++G+ + G+ +  +Q+ + M  
Sbjct: 535 NILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594

Query: 434 S-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V   T  YN+MI+ F +   LH     F  M + G  PDT T+  +ID     G  D
Sbjct: 595 QYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTD 654

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              +   EM E+G+ P  TT+  +IN L  Q R  +   ++  M   G++P VV   +  
Sbjct: 655 SGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISEA 714

Query: 553 D 553
           D
Sbjct: 715 D 715



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 201/503 (39%), Gaps = 69/503 (13%)

Query: 211 KALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           KAL + +K+ R+DG+    + Y  +IQ L       +  ++ +  E    ++++D  LL 
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVA--MENVLAE---TRMDIDNSLLE 76

Query: 270 DVIVG----FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
            V +G    + + G   +A+            P   +Y A++  L  SG   +A  VF  
Sbjct: 77  GVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLR 136

Query: 326 LKESGLKP-------------RTK----------------------AYNALLKGYVKMGY 350
           +K  G+ P             RTK                      AY  ++ G+ +  Y
Sbjct: 137 MKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENY 196

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
             +A  + ++M R G+ PD  T++ L+      G  + +  +L ++       N F ++ 
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
            + G   +G       +L  +   G+ PD   YN +I    K + +  A     ++++ G
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           +EPD  T+NTLID + K G    AE++ +    +G+ P   TY  +IN L + +  +   
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            L      +GL P V+ Y  L+    Q G    A++                        
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G    A N        G  P     N+LI+ + +  +      +L  M  +G+ PDV
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 627 VTYTTLMKALIRVDKFHKVFSSY 649
           +TY +++  L +  K   +  ++
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETF 519



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 156/337 (46%), Gaps = 15/337 (4%)

Query: 306 VITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE--ME 362
           V   L      ++A  +F ++K E G K     Y  +++     G     E V++E  M+
Sbjct: 10  VAAVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD 69

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
               L  E  Y   + +Y   G+ + A  V + M+  + +P+   Y+ I+    + G ++
Sbjct: 70  IDNSLL-EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFK 128

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  +V   MK+ G+ PD + + + I +F +    H A+   + M+S+G + + + + T++
Sbjct: 129 QAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVV 188

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              ++      A ELF +M   G FP  +T+N +++ L ++   ++ +RLL  +  +G+ 
Sbjct: 189 AGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMC 248

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            N+ T+   +    + G    A+  L+           V+R +GL P  +  N+LI    
Sbjct: 249 SNLFTFNIFIQGLCRKGMLSGAMSMLD----------SVIR-EGLTPDVVTYNTLICGLC 297

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           ++    EA   L  +   GL+PD  TY TL+    ++
Sbjct: 298 KNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 48/441 (10%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+   + + ++ A  ++ +MR   +  D + Y+++I SL    K+D +L       
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL------- 213

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                 ++  QLL+D                           P   TY  +I A    G 
Sbjct: 214 ------KVLNQLLSD------------------------NCQPTVITYTILIEATMLEGG 243

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + +E+   GLKP    YN +++G  K G +  A  +V  +E  G  PD  +Y++
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+ A  N G+WE    ++ +M      PN   YS ++      G+ +    +LK MK  G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PD + Y+ +I  F +   L  A+   + M+S+G  PD + +NT++    K G+ D+A 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+F ++ E G  P +++YN M + L           ++  M + G+ P+ +TY +++   
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EG+ D+A      MR+    PS +  N ++  F +  R  +A  VL+
Sbjct: 484 -----------CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M  NG +P+  TYT L++ +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGI 553



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +  ++ +A  +  R R    +P  +TYN +I +      L+ AL +++++ 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            D      I Y+++I++      +D +L  KL  E+    ++ D    N +I G  K G 
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +   +  G  P   +Y  ++ AL N G+  E E +  ++      P    Y+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G +++A  ++  M+  G+ PD ++Y  LI A+   GR + A   L+ M    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ +LA     G+  +  ++  ++   G  P++  YN M            A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M+S GI+PD IT+N++I C  + G  D A EL  +M+   + P   TYNI++   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            +  R ED   +L +M   G  PN  TYT L++  G +G   +A+E
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 25/395 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++G+  +++  L      G +P       +I          +A  V E L++ G +P  
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AYNAL+ G+ KM  + DA  V+  M      PD  TY+++I +  + G+ + A  VL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +   + +P    Y+ ++      G      +++ EM S G++PD   YN +I    K   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A      +  +G EPD I++N L+      G+++  E+L  +M      P   TY+I
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           +I  L    + E+   LL  M+ +GL P+  +Y  L+  + + GR D AIE         
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G +DQA+  F  +   G  P++ + N++ +A         A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            ++  M  NG+ PD +TY +++  L R     + F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 18/280 (6%)

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G +  +  +L+ M      P+  + ++++ G+       +  +V++ ++  G +PD   
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I+ F K N +  A    DRM S+   PDT+T+N +I      G+ D A ++  ++ 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P   TY I+I     +   ++  +L+  M ++GL P++ TY T+  I G      
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI--IRGM----- 273

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EG+ D+A    R +   G +P  ++ N L+ A     +  E   ++  M     
Sbjct: 274 ----CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            P+VVTY+ L+  L R  K  +        N+ K++   G
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA------MNLLKLMKEKG 363


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 269  NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            N VI    + G   +A   L + +  G +P   +Y+ V+      G   +   + E +K 
Sbjct: 693  NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752

Query: 329  SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             GLKP +  Y +++    ++  L +AE   SEM R G+LPD   Y+ LID +   G   +
Sbjct: 753  KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812

Query: 389  ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
            A     EM      P+   Y+ I++G+   G+     ++  EM   G+EPD+  +  +I+
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 449  TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             + K   +  A    + M+  G  P+ +T+ TLID   K G  D A EL  EM + G  P
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 509  CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               TYN ++N L +    E+  +L+G   A GL  + VTYTTL+D Y +SG  D A E L
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 569  EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                       + M   GL+P+ +  N L+N F       +   +L +M   G+ P+  T
Sbjct: 993  -----------KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 1041

Query: 629  YTTLMK 634
            + +L+K
Sbjct: 1042 FNSLVK 1047



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 189/410 (46%), Gaps = 7/410 (1%)

Query: 165  LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
            +Y  +I  L R  KL EA   F    RQ + P  + Y  LI    +  D+  A     +M
Sbjct: 761  IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 820

Query: 220  RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                   D + Y+ +I    +    D     KL+ E+ C  +E D     ++I G+ KAG
Sbjct: 821  HSRDITPDVLTYTAIISGFCQIG--DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 878

Query: 280  DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                A R        G SP   TY  +I  L   G    A  +  E+ + GL+P    YN
Sbjct: 879  HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 938

Query: 340  ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            +++ G  K G +++A  +V E E +G+  D  TY+ L+DAY  +G  + A+ +LKEM   
Sbjct: 939  SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 998

Query: 400  HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              +P    ++ ++ G+   G  +   ++L  M + G+ P+   +N ++  +   N L  A
Sbjct: 999  GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 1058

Query: 460  MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             A +  M S G+ PD  T+  L+  H K      A  LF+EM+ +G+    +TY+++I  
Sbjct: 1059 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 1118

Query: 520  LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              +++++ + + +   MR +GL  +   +    D   +  R D  ++ ++
Sbjct: 1119 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 1168



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 224/525 (42%), Gaps = 81/525 (15%)

Query: 166  YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+I+IH    LGR ++ +   LL + +  TP  ++Y+ +++   R  +L+K   L+  M+
Sbjct: 692  YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            + G   +   Y  +I  L R  K+  +  ++ + E+    I  D  +   +I GF K GD
Sbjct: 752  RKGLKPNSYIYGSIIGLLCRICKLAEA--EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
               A +F        ++P   TY A+I+     G  +EA  +F E+   GL+P +  +  
Sbjct: 810  IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L+ GY K G++KDA  V + M ++G  P+  TY+ LID     G  +SA  +L EM    
Sbjct: 870  LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 401  AKPNSFIYSRILAG-----------------------------------YRDRGEWQRTF 425
             +PN F Y+ I+ G                                   Y   GE  +  
Sbjct: 930  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 426  QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            ++LKEM   G++P    +NV+++ F  +  L       + ML++GI P+  T+N+L+  +
Sbjct: 990  EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049

Query: 486  FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                    A  ++++M  RG  P   TY  ++    +    ++   L   M+ +G   +V
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109

Query: 546  VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
             TY+ L+  + +  +F +A E            F  MR +GL                  
Sbjct: 1110 STYSVLIKGFLKRKKFLEARE-----------VFDQMRREGLAA---------------- 1142

Query: 606  RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
             D E F      K  G +PD +           VD   ++  +YL
Sbjct: 1143 -DKEIFDFFSDTKYKGKRPDTI-----------VDPIDEIIENYL 1175



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 44/464 (9%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS-------- 246
            +YN +I    +   +++A +L+  M   GY  D I+YS V+    R  ++D         
Sbjct: 691  SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 247  ----------------SLLQKLYKEIECDK---------IELDGQLLNDVIVGFAKAGDA 281
                             LL ++ K  E ++         I  D  +   +I GF K GD 
Sbjct: 751  KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810

Query: 282  SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              A +F        ++P   TY A+I+     G  +EA  +F E+   GL+P +  +  L
Sbjct: 811  RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870

Query: 342  LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
            + GY K G++KDA  V + M ++G  P+  TY+ LID     G  +SA  +L EM     
Sbjct: 871  INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930

Query: 402  KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            +PN F Y+ I+ G    G  +   +++ E +++G+  DT  Y  ++D + K   +  A  
Sbjct: 931  QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 990

Query: 462  AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
                ML +G++P  +T+N L++     G  +  E+L   M  +G  P  TT+N ++    
Sbjct: 991  ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050

Query: 522  EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
             +   +    +  +M ++G+ P+  TY  LV  +           C      +A   F+ 
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH-----------CKARNMKEAWFLFQE 1099

Query: 582  MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            M+  G   S    + LI  F + ++  EA  V   M+  GL  D
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKD 353
           G  P+   +      L + G   EA  VFE++   GL     + N  L    K  Y    
Sbjct: 615 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V  E    GV  +  +Y+++I      GR + A  +L  ME+    P+   YS ++ 
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   GE  + +++++ MK  G++P+++ Y  +I    +   L  A  AF  M+ +GI P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DT+ + TLID   K G    A + F EM  R   P   TY  +I+   +     +  +L 
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M  +GL P+ VT+T L++ Y ++G   DA                          C E
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  D A      M   GL+P+    NS++N   +     EA  ++   +  GL  D VTY
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972

Query: 630 TTLMKALIR---VDKFHKVFSSYL 650
           TTLM A  +   +DK  ++    L
Sbjct: 973 TTLMDAYCKSGEMDKAQEILKEML 996


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 214/471 (45%), Gaps = 18/471 (3%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALN 214
           Y+  + Y+ L++A  R   + EAF L      + L P   TYNALI+   +    E+A  
Sbjct: 256 YADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKR 315

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           ++ +M   G   +   ++ ++    R  K D    ++++ E+    +  D    + ++  
Sbjct: 316 VLDEMLGVGLCPNAATFNPMLVESCR--KEDVWEAERVFNEMLQRGVVPDLISFSSIVGV 373

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F++ G+  +A+ +    +GVGL P T  Y  +I     +     A  +  E+ E G    
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN LL G  +   L DA+ +  EM   GV PD +T + LI  Y   G    A  + +
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M +   KP+   Y+ ++ G+   GE ++  ++  +M S  + P    ++++I+ F    
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A   +D M  +GI+P  +T NT+I  + + G   +A +    M   G  P   TYN
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +IN   ++E ++    L+ NM  +GLLPN+VTY  ++  + + GR  +A   L  + D+
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            +N           P      SLIN +       EAF V   M + G  PD
Sbjct: 674 GIN-----------PDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 234/498 (46%), Gaps = 33/498 (6%)

Query: 153 LQKHNLCYSYELLYSIL--IHALGRSE---KLYEAFLLSQRQRLTPLTYNALISACARND 207
           L+K   C S     ++L  I  +G  +   K+YE F+ S    +   T N +++A  ++ 
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSG-NIVNVYTLNIMVNALCKDG 238

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            L+     +S+M + G + D + Y+ ++ +  R       L+ + +  ++C    + G+ 
Sbjct: 239 KLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCR-----RGLVSEAFGLVDC----MAGKG 289

Query: 268 L-------NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           L       N +I G  K G   +A R L    GVGL P  AT+  ++          EAE
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            VF E+ + G+ P   ++++++  + + G L  A     +M+  G++PD   Y++LI+ Y
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
                   A  +  EM       +   Y+ +L G           ++ KEM   GV PD 
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           +    +I  + K   +  A++ F+ M    ++PD +T+NTL+D   K G  ++A+EL+ +
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M  R  FP   +++I+IN         +  RL   M+ +G+ P +VT  T++  Y ++G 
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
              A + L             M ++G+ P  +  N+LIN+F +++    AF ++  M+E 
Sbjct: 590 LSKANDFLN-----------TMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 621 GLKPDVVTYTTLMKALIR 638
           GL P++VTY  ++    R
Sbjct: 639 GLLPNLVTYNAILGGFSR 656



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 143/585 (24%), Positives = 247/585 (42%), Gaps = 74/585 (12%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY-----------------SILIH 171
           + SL  +L  SNS++ L   +   LQK   C +Y LL                  + LIH
Sbjct: 52  FSSLRTHLLHSNSTLTLTL-IPQLLQK---CQNYPLLLPNLIQTIASTSPNPSIIATLIH 107

Query: 172 ALGRSEKLYEAFLLSQR-------------------------QRLTPLTYNALISACARN 206
            L +S+KL EA  L  R                              + ++ LI    + 
Sbjct: 108 FLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRTYVQA 167

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
             L +       +R+ G+       + ++ ++ +   +D  L  K+Y++       ++  
Sbjct: 168 RKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVD--LAWKVYEDFVKSGNIVNVY 225

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            LN ++    K G       +L   +  G+     TY  ++ A    G   EA  + + +
Sbjct: 226 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 285

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS-LLIDAYANAGR 385
              GLKP    YNAL+ G  K G  + A+ V+ EM   G+ P+  T++ +L+++      
Sbjct: 286 AGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDV 345

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WE+ R V  EM      P+   +S I+  +   GE  R     ++MK  G+ PDT  Y +
Sbjct: 346 WEAER-VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+ + + + +  A+   + M+  G   D +T+NTL++   +    D A+ELF+EM ERG
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
            FP   T   +I+   +         L   M  + L P+VVTY TL+D + + G  + A 
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524

Query: 566 E------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           E                        C  GL  +A   +  M+  G+KP+ +  N++I  +
Sbjct: 525 ELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGY 584

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
                 ++A   L  M   G+ PD +TY TL+ + ++ + F + F
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 15/334 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           E    F+ L++ G      A NALL   VK+G++  A  V  +  +SG + + +T ++++
Sbjct: 172 EGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMV 231

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A    G+ ++  + L EME      +   Y+ ++  Y  RG     F ++  M   G++
Sbjct: 232 NALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLK 291

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD--RAE 495
           P    YN +I+   K      A    D ML  G+ P+  T+N ++     C + D   AE
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML--VESCRKEDVWEAE 349

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            +F EM +RG  P   +++ ++ +                M+  GL+P+ V YT L++ Y
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++     A++    + ++ V    VM         +  N+L+N     +   +A  + +
Sbjct: 410 CRNDDVSGALK----MRNEMVERGCVMDV-------VTYNTLLNGLCRGKMLDDADELFK 458

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M E G+ PD  T TTL+    +     K  S +
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 42/319 (13%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           ++Y+ILI+   R++ +  A      ++ +   +  +TYN L++   R   L+ A  L  +
Sbjct: 400 VIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE 459

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G   DF   + +I    +   +  +L   L++ +    ++ D    N ++ GF K 
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKAL--SLFETMTLRSLKPDVVTYNTLMDGFCKV 517

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR---- 334
           G+  KA           + P   +++ +I    + G   EA  +++E+KE G+KP     
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577

Query: 335 -------------TKA------------------YNALLKGYVKMGYLKDAEFVVSEMER 363
                        +KA                  YN L+  +VK      A F+++ ME 
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+LP+  TY+ ++  ++  GR + A +VL +M      P+   Y+ ++ GY  +   + 
Sbjct: 638 RGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697

Query: 424 TFQVLKEMKSSGVEPDTHF 442
            F+V  EM   G  PD  F
Sbjct: 698 AFRVHDEMLQRGFVPDDKF 716


>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Glycine max]
          Length = 857

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/525 (24%), Positives = 228/525 (43%), Gaps = 65/525 (12%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +++I+I  LGR    +K  E F  + S     T  +Y A+I+A  RN
Sbjct: 123 YMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRN 182

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
                +L L++ M+Q+      + Y+ VI +  R   +D   L  L+ E+  +       
Sbjct: 183 GQFHASLELLNGMKQERVSPSILTYNTVINACAR-GGLDWEGLLGLFAEMRHE------- 234

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                                       G+ P   TY  ++ A ++ G   EAE VF  +
Sbjct: 235 ----------------------------GIQPDVITYNTLLGACAHRGLGDEAEMVFRTM 266

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            ESG+ P    Y+ L++ + K+  L+    ++ EME  G LPD  +Y++L++AYA  G  
Sbjct: 267 NESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSI 326

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V ++M+ +    N+  YS +L  Y   G +     +  EMK S  +PD   YN++
Sbjct: 327 KEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNIL 386

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I  FG+       +  F  M  E +EP+  T+  LI    K G Y+ A+++   M E+G 
Sbjct: 387 IQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGV 446

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG------- 559
            P +  Y  +I   G+   +E+   +   M   G  P V TY +L+  + + G       
Sbjct: 447 VPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEA 506

Query: 560 ---------------RFDDAIECLE--GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                           F+  IE     G  ++AV ++  M     +P+ L L ++++ + 
Sbjct: 507 ILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYC 566

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
                 E     Q +K +G+ P V+ Y  ++    + D+ +  ++
Sbjct: 567 SAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYN 611



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 210/449 (46%), Gaps = 15/449 (3%)

Query: 204 ARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           A+  D +++L L   M RQ     +   ++++I  L R   +D    ++++ E+  + + 
Sbjct: 109 AQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKC--REVFDEMPSNGVV 166

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE-A 321
                   +I  + + G    ++  L   +   +SP   TY  VI A +  G   E    
Sbjct: 167 RTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLG 226

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E++  G++P    YN LL      G   +AE V   M  SG++PD +TYS L+  + 
Sbjct: 227 LFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFG 286

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R E    +L+EME     P+   Y+ +L  Y + G  +    V ++M+++G   +  
Sbjct: 287 KLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAA 346

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+V+++ +GK+         F  M     +PD  T+N LI    + G +     LF +M
Sbjct: 347 TYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 406

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E    P   TY  +I   G+   +ED K++L +M  +G++P+   YT +++ +GQ+   
Sbjct: 407 AEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAA-- 464

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                    L ++A+  F  M   G  P+    NSLI+AF       EA A+L  M E+G
Sbjct: 465 ---------LYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESG 515

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           LK DV ++  +++A  +  ++ +   SY+
Sbjct: 516 LKRDVHSFNGVIEAFRQGGQYEEAVKSYV 544



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 177/400 (44%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA+ GD  +++R F  M + +   P    +  +IT L   G   +   VF
Sbjct: 98  LNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVF 157

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+  +G+     +Y A++  Y + G    +  +++ M++  V P   TY+ +I+A A  
Sbjct: 158 DEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARG 217

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L     RG       V + M  SG+ PD + 
Sbjct: 218 GLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINT 277

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ ++ TFGK N L         M   G  PD  ++N L++ + + G    A  +F +MQ
Sbjct: 278 YSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQ 337

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G      TY++++NL G+  R++DV+ L   M+     P+  TY  L+ ++G+ G F 
Sbjct: 338 AAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFK 397

Query: 563 DAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +                            GL + A      M   G+ PS+ A   +I
Sbjct: 398 EVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVI 457

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            AFG+     EA  +   M E G  P V TY +L+ A  R
Sbjct: 458 EAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFAR 497



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 200/447 (44%), Gaps = 43/447 (9%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           Y+ +I+A GR+ + + +  L    +++R++P  LTYN +I+ACAR   D E  L L ++M
Sbjct: 172 YTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM 231

Query: 220 RQDGYHCDFINY-----------------------------------SLVIQSLTRTNKI 244
           R +G   D I Y                                   S ++Q+  + N++
Sbjct: 232 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL 291

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +   + +L +E+EC     D    N ++  +A+ G   +AM      Q  G     ATY+
Sbjct: 292 EK--VSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYS 349

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++      GR  +   +F E+K S   P    YN L++ + + GY K+   +  +M   
Sbjct: 350 VLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEE 409

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            V P+  TY  LI A    G +E A+ +L  M      P+S  Y+ ++  +     ++  
Sbjct: 410 NVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEA 469

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +   M   G  P    YN +I  F +      A A   RM   G++ D  ++N +I+ 
Sbjct: 470 LVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEA 529

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             + G+Y+ A + + EM++    P   T   ++++       ++ +     ++A G+LP+
Sbjct: 530 FRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPS 589

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGL 571
           V+ Y  ++ +Y ++ R +DA   ++ +
Sbjct: 590 VMCYCMMLALYAKNDRLNDAYNLIDAM 616



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 159/364 (43%), Gaps = 13/364 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY+ L++   ++   +   +L  +M+      D   Y+++IQ           +   L+ 
Sbjct: 347 TYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVV--TLFH 404

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  + +E + Q    +I    K G    A + L      G+ P +  Y  VI A   + 
Sbjct: 405 DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAA 464

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  +F  + E G  P  + YN+L+  + + G  K+AE ++S M  SG+  D H+++
Sbjct: 465 LYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 524

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-----AGYRDRGEWQRTFQVLK 429
            +I+A+   G++E A     EME ++ +PN      +L     AG  D GE Q      +
Sbjct: 525 GVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQ-----FQ 579

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC- 488
           E+K+SG+ P    Y +M+  + K + L+ A    D M++  +         +I   F   
Sbjct: 580 EIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDE 639

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
             +   E +F+++   G       YN ++  L    + E   R+L     +GL P +   
Sbjct: 640 SNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEASKRGLFPELFRK 699

Query: 549 TTLV 552
           + LV
Sbjct: 700 SKLV 703



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 13/280 (4%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           ++L+   +A  G W+ +  + K M+     KPN  I++ ++      G   +  +V  EM
Sbjct: 101 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEM 160

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-R 490
            S+GV    + Y  +I+ +G+    H ++   + M  E + P  +T+NT+I+   + G  
Sbjct: 161 PSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 220

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           ++    LF EM+  G  P   TYN ++     +   ++ + +   M   G++P++ TY+ 
Sbjct: 221 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 280

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           LV  +G+  R +   E L           R M   G  P   + N L+ A+ E     EA
Sbjct: 281 LVQTFGKLNRLEKVSELL-----------REMECGGNLPDITSYNVLLEAYAELGSIKEA 329

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
             V + M+  G   +  TY+ L+    +  ++  V   +L
Sbjct: 330 MGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/455 (20%), Positives = 168/455 (36%), Gaps = 86/455 (18%)

Query: 101 SALASSPSSLNRVEFKLAESYRA------VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ 154
           S L  +   LNR+E K++E  R       +P    +++L    +   SI  A  V   +Q
Sbjct: 279 SYLVQTFGKLNRLE-KVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQ 337

Query: 155 KHNLCYSYELLYSILIHALG---RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDL 209
               C +    YS+L++  G   R + + + FL  +     P   TYN LI         
Sbjct: 338 AAG-CVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYF 396

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++ + L   M ++    +   Y  +I +  +    + +  +K+   +    +    +   
Sbjct: 397 KEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDA--KKILLHMNEKGVVPSSKAYT 454

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            VI  F +A    +A+        VG +P   TY ++I A +  G   EAEA+   + ES
Sbjct: 455 GVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNES 514

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GLK    ++N +++ + + G  ++A     EME++   P+E T   ++  Y +AG  +  
Sbjct: 515 GLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEG 574

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYR--------------------------------- 416
               +E++ S   P+   Y  +LA Y                                  
Sbjct: 575 EEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMIKG 634

Query: 417 ---DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
              D   WQ    V  ++ S G      FYN +++                         
Sbjct: 635 DFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEAL----------------------- 671

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               W     C F+    +RA  +  E  +RG FP
Sbjct: 672 ----W-----CMFQ---RERAARVLNEASKRGLFP 694


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 22/487 (4%)

Query: 179 LYEAFLL-SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           ++ + LL   R   T L  + L+ A  +N +L  A    ++ +  G+     + + ++ +
Sbjct: 115 VFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSA 174

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L + NKI    ++ +YKE+   +I  +    N  I G  +AG  +KA   +   +  G+S
Sbjct: 175 LVKENKIGD--VEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGIS 232

Query: 298 PKTATYAAVITAL---SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           P   TY  ++       ++G+  +AEA  +E+  + + P    +N L+ G+ K   +  A
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           +    EM++ G+ P+  TY+ LI+   N G+ E A  +  +M     KPN   Y+ ++ G
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  +   +   +V  ++    + P+   +N MID + K   +    +    ML EGI P+
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N LI    +      A+EL  EM+ +G      TYNI+I+ L + ++  + ++LL 
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL PN VTY TL+D Y           C+EG    A+N    M  +  +P+ +  
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGY-----------CMEGKLKAALNVRTRMEKERKQPNVVTY 521

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           N LI  + +  +   A  +L  M E GL P+  TY      ++R++   K FS  +  ++
Sbjct: 522 NVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD-----IVRLEMLEKGFSPDIEGHL 576

Query: 655 YKMLSYS 661
           Y + S S
Sbjct: 577 YNISSMS 583



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 2/379 (0%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           + +G  E +Y+  ++ +R      T+N  I+   R   L KA + +  M+  G   + + 
Sbjct: 179 NKIGDVEYVYKE-MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVT 237

Query: 231 YSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           Y+ ++    +          +   KE+  +KI  +    N +I GF K  + + A +   
Sbjct: 238 YNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFE 297

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             Q  GL P   TY ++I  L N+G+  EA  +++++   GLKP    YNAL+ G+ K  
Sbjct: 298 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK 357

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +K+A  V  ++ +  ++P+  T++ +IDAY   G  E    +   M      PN   Y+
Sbjct: 358 MMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYN 417

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++AG   + + Q   ++L EM++ G++ D   YN++ID   K +   +A    + M + 
Sbjct: 418 CLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL 477

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++P+ +T+NTL+D +   G+   A  +   M++    P   TYN++I    +  + E  
Sbjct: 478 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537

Query: 530 KRLLGNMRAQGLLPNVVTY 548
             LL  M  +GL PN  TY
Sbjct: 538 NGLLNEMLEKGLNPNRTTY 556



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 171/359 (47%), Gaps = 10/359 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA-CARND--DLEKALNLMS 217
           ++I I+ L R+ KL +A    +  +   ++P  +TYN L+   C R     + KA   M 
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M  +    + + ++ +I    +   + ++  +K ++E++   ++ +    N +I G   
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAA--KKAFEEMQKQGLKPNIVTYNSLINGLCN 320

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A+       G+GL P   TY A+I          EA  VF+++ +  L P    
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N ++  Y K G +++   + S M   G+LP+  TY+ LI         ++A+ +L EME
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               K +   Y+ ++ G     + +   ++L EM + G++P+   YN ++D +     L 
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            A+    RM  E  +P+ +T+N LI  + K  + + A  L  EM E+G  P  TTY+I+
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 61/360 (16%)

Query: 129 WHSLLKNLCSSNSSIDL--AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---YEAF 183
           +++L+   C   S+  +  A A +  +  + +C + E+ ++ LI    + E +    +AF
Sbjct: 238 YNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPN-EVTFNTLIDGFCKDENVAAAKKAF 296

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR- 240
              Q+Q L P  +TYN+LI+    N  LE+A++L  KM   G   + + Y+ +I    + 
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 241 ------TNKIDSSLLQKLYKEI---------------------ECDKIELDGQL-----L 268
                 T   D    Q+L   +                      C  +  +G L      
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G  +  D   A   L   +  GL     TY  +I  L  + ++  AE +  E+  
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GLKP    YN L+ GY   G LK A  V + ME+    P+  TY++LI  Y    + E+
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK-EMKSSGVEPDT--HFYNV 445
           A  +L EM      PN                 + T+ +++ EM   G  PD   H YN+
Sbjct: 537 ANGLLNEMLEKGLNPN-----------------RTTYDIVRLEMLEKGFSPDIEGHLYNI 579


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 223/466 (47%), Gaps = 36/466 (7%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
           AR DD+      M ++  +      + Y+ ++ S  +  + D + +  L KE+E    + 
Sbjct: 222 ARWDDVRAVYREMLQLEIEP---TIVTYNTLLDSFLKEGRKDEASM--LLKEME---TQG 273

Query: 264 DGQLLNDV----IVGF-AKAGDASKAMRFLGMAQGVGLSPKTA--TYAAVITALSNSGRT 316
            G LLNDV    ++ F A+ G    A +   +   + LS K +  TY  +ITAL   G  
Sbjct: 274 GGCLLNDVTYNVVISFLAREGHLENAAK---LVDSMRLSKKASSFTYNPLITALLERGFV 330

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            + EA+  E++  G+ P    YNA++ G +K   ++ A+   +EM   G+LPD  TY+ +
Sbjct: 331 QKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSM 390

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ++ Y  AG  + A  +L ++  +   P    Y+ ++ GY   G  +   ++ +EM   G 
Sbjct: 391 LNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGC 450

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y ++++   K   L  A   FD MLS+G++PD   +NT I      G   +A +
Sbjct: 451 FPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQ 510

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L E M  +G +P T TYN++I+ L +    +D K L   M + GL P+ +TYT L+  + 
Sbjct: 511 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHC 570

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G   +A + L G           M +DGL+PS +    LI+          A+   + 
Sbjct: 571 ERGLLSEARKLLNG-----------MVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRK 619

Query: 617 MKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
           M + G++P+ +TY  L+ AL R  +       FH++    L  N Y
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKY 665



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 215/480 (44%), Gaps = 29/480 (6%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLL 249
           T +TYN L+ +  +    ++A  L+ +M   G  C  + + Y++VI  L R   ++++  
Sbjct: 242 TIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENA-- 299

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            KL   +   K +      N +I    + G   K        +  G+ P   TY A+I  
Sbjct: 300 AKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHG 358

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  S +   A+  F E++  GL P    YN++L GY K G LK+A +++ ++ R+G+ P 
Sbjct: 359 LLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPT 418

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LID Y   G  E AR + +EM      P+   Y+ ++ G           +   
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM S G++PD   YN  I         H A    + M+ +GI PDT+T+N +ID   K G
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A++L  +M   G  P   TY  +I+   E+    + ++LL  M + GL P+VVTYT
Sbjct: 539 NLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYT 598

Query: 550 TLV-------DIYGQSGRF----DDAIE-------------CLEGLSDQAVNAFRVMRTD 585
            L+       ++Y   G F    D  IE             C  G +  A + F  M   
Sbjct: 599 ILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           GL P+      LI+    +   A+A  +   M +NG+ PD  T+  L K   +   +H +
Sbjct: 659 GLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHMYHAI 718



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 200/452 (44%), Gaps = 42/452 (9%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP----LTYNALISACARNDDLEKALN 214
           C   ++ Y+++I  L R   L  A  L    RL+      TYN LI+A      ++K   
Sbjct: 276 CLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEA 335

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           L  +M  +G     + Y+ +I  L ++ +++++ L+  + E+    +  D    N ++ G
Sbjct: 336 LQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLK--FAEMRAMGLLPDLITYNSMLNG 393

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           + KAG+  +A+  LG  +  GL+P   TY  +I      G   EA  + EE+ E G  P 
Sbjct: 394 YCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPD 453

Query: 335 TKAYNALLKGYVKM----------------GYLKD---------AEFVVSEMERS----- 364
              Y  L+ G  K+                G   D         AE ++ +  ++     
Sbjct: 454 VCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLRE 513

Query: 365 -----GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
                G+ PD  TY+++ID     G  + A+ +  +M     +P+   Y+ ++  + +RG
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 ++L  M S G++P    Y ++I T  +   L+ A   F +ML  GIEP+ IT+N
Sbjct: 574 LLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 633

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    + GR   A   F EM ERG  P   TY ++I+    +  W D  RL   M   
Sbjct: 634 VLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 693

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           G+ P+  T+  L   + + G    AIE LE +
Sbjct: 694 GIPPDYCTHNALFKGFDK-GHMYHAIEYLENI 724



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 168/369 (45%), Gaps = 31/369 (8%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+  L ++ R  +  AV+ E+ +  ++P    YN LL  ++K G   +A
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 355 EFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ EME    G L ++ TY+++I   A  G  E+A  ++  M +S  K +SF Y+ ++
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLI 321

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
               +RG  Q+   +  EM++ G+ P    YN +I    K   +  A   F  M + G+ 
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N++++ + K G    A  L  +++  G  P   TYN +I+        E+ +RL
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRL 441

Query: 533 LGNMRAQGLLPNVVTYTTLV--------------------------DIYGQSGRFDDAIE 566
              M  QG  P+V TYT L+                          D +  + R     E
Sbjct: 442 KEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI--CAE 499

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            + G + +A     VM   G+ P  +  N +I+   +     +A  +   M  +GL+PD 
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC 559

Query: 627 VTYTTLMKA 635
           +TYT L+ A
Sbjct: 560 ITYTCLIHA 568



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           C    +AAF  +   G+ PD    N ++       R+D    ++ EM +    P   TYN
Sbjct: 188 CSTLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYN 247

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +++   ++ R ++   LL  M  Q  G L N VTY  ++    + G  ++A        
Sbjct: 248 TLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA------- 300

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            + V++ R+ +    K S+   N LI A  E     +  A+   M+  G+ P +VTY  +
Sbjct: 301 -KLVDSMRLSK----KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAI 355

Query: 633 MKALIRVDK 641
           +  L++ ++
Sbjct: 356 IHGLLKSEQ 364


>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 237/500 (47%), Gaps = 25/500 (5%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    EK  E F       + P   ++ ALI+A  RN
Sbjct: 135 YMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRN 194

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              + +L L+ +M+++      + Y+ VI S  R   +D   L  L+ ++  + I+ D  
Sbjct: 195 GQYKSSLELLDRMKKERVSPSILTYNTVINSCARGG-LDWEELLGLFAQMRHEGIQADIV 253

Query: 267 LLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
             N ++   A+ G   +A M F  M +G G+ P   TY+ ++       R  +   + +E
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEG-GILPDITTYSYLVETFGKLNRLEKVSELLKE 312

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++  G  P   +YN LL+ + + G +K+A  V  +M+ +G +P+  TYS+L++ Y   GR
Sbjct: 313 MESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 372

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++  R +  EM+VS+ +PN+  Y+ ++  + + G ++    +  +M    VEP+   Y  
Sbjct: 373 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 432

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I   GK      A      M  +G+ P +  +  +I+ + +   Y+ A   F  M E G
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TYN +I +  +   +++ + +L  M   G+  N  T+  +++ + Q G+F++AI
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAI 552

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRDAEAFAVLQYMKENGL 622
           +           A+  M      P    L ++++ +   G  +   E F  ++ +   G+
Sbjct: 553 K-----------AYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKAL---GI 598

Query: 623 KPDVVTYTTLMKALIRVDKF 642
            P V+ Y  ++    + D++
Sbjct: 599 LPSVMCYCMMLAVYAKADRW 618



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 207/449 (46%), Gaps = 15/449 (3%)

Query: 204 ARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           A+  D +++L L   M RQ     +   Y+++I  L R   ++    Q+++ E+    + 
Sbjct: 121 AQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKC--QEIFDEMPSHGVA 178

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE-A 321
                   +I  + + G    ++  L   +   +SP   TY  VI + +  G   E    
Sbjct: 179 PSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLG 238

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F +++  G++     YN LL    + G   +AE V   M   G+LPD  TYS L++ + 
Sbjct: 239 LFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFG 298

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R E    +LKEME   + P+   Y+ +L  +   G  +    V ++M+ +G  P+  
Sbjct: 299 KLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAA 358

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+++++ +G++         F  M     EP+  T+N LI+   + G +     LF +M
Sbjct: 359 TYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDM 418

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E    P   TY  +I   G+    ED K++L +M  +G++P+   YT +++ YGQ+   
Sbjct: 419 VEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAA-- 476

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                    L ++A+ AF  M   G KP+    NSLI  F +     E+ A+L  M ++G
Sbjct: 477 ---------LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSG 527

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  +  T+  +++A  +  +F +   +Y+
Sbjct: 528 VARNRDTFNGVIEAFRQGGQFEEAIKAYV 556



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 204/515 (39%), Gaps = 114/515 (22%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           ++ LI+A GR+ +   +  L  R   +R++P  LTYN +I++CAR   D E+ L L ++M
Sbjct: 184 FTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQM 243

Query: 220 RQDGYHCDFINY-----------------------------------SLVIQSLTRTNKI 244
           R +G   D + Y                                   S ++++  + N++
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 303

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +   + +L KE+E      D    N ++   A++G   +AM      QG G  P  ATY+
Sbjct: 304 EK--VSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 361

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK------------ 352
            ++      GR  +   +F E+K S  +P    YN L+  + + GY K            
Sbjct: 362 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 421

Query: 353 -----------------------DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
                                  DA+ ++  M   GV+P    Y+ +I+AY  A  +E A
Sbjct: 422 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA 481

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +    M    +KP    Y+ ++  +   G ++ +  +L +M  SGV  +   +N +I+ 
Sbjct: 482 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEA 541

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F +      A+ A+  M     +PD  T   ++  +   G  + +EE F E++  G  P 
Sbjct: 542 FRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPS 601

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNM--------------------------------- 536
              Y +M+ +  + +RW+D  +LL  M                                 
Sbjct: 602 VMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVF 661

Query: 537 ---RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              +++G    V  Y TL++     G+ + A   L
Sbjct: 662 EKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVL 696



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 13/230 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           ++ +   +  RG+WQR+ ++ K M+     +P+ H Y +MI   G+   L      FD M
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE-R 525
            S G+ P   ++  LI+ + + G+Y  + EL + M++    P   TYN +IN        
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLD 232

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           WE++  L   MR +G+  ++VTY TL+    +            GL D+A   FR M   
Sbjct: 233 WEELLGLFAQMRHEGIQADIVTYNTLLSACAR-----------RGLGDEAEMVFRTMNEG 281

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           G+ P     + L+  FG+  R  +   +L+ M+  G  PD+ +Y  L++A
Sbjct: 282 GILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEA 331



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 169/396 (42%), Gaps = 14/396 (3%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+ A  +S  + EA   F   Q     P   TY+ L++   R+   +   +L  +M+
Sbjct: 325 YNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMK 384

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 +   Y+++I            +   L+ ++  + +E + +    +I    K G 
Sbjct: 385 VSNTEPNAATYNILINVFGEGGYFKEVV--TLFHDMVEENVEPNMETYEGLIFACGKGGL 442

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A + L      G+ P +  Y  VI A   +    EA   F  + E G KP  + YN+
Sbjct: 443 HEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNS 502

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ + K G  K++E ++ +M +SGV  +  T++ +I+A+   G++E A     EME + 
Sbjct: 503 LIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKAR 562

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+      +L+ Y   G  + + +   E+K+ G+ P    Y +M+  + K +    A 
Sbjct: 563 CDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAH 622

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKC-GRYDRAEELFEEMQERGYFPCTTTYNIMIN- 518
              D M +  +         +I   +     +   E +FE+++  G       YN ++  
Sbjct: 623 QLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEA 682

Query: 519 --LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              LG++ER     R+L     +GL P +     LV
Sbjct: 683 LWWLGQKER---ATRVLNEATKRGLFPELFRKNKLV 715


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 249/529 (47%), Gaps = 23/529 (4%)

Query: 112 RVEFKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           R+  +L E  R VP    +++LL N+C  N     A  +V+ +    L    E+ Y+ILI
Sbjct: 323 RLACQLGE-LRMVPNIFAYNALLNNMCK-NGMFSEADRLVNEMSDKGL-EPNEVTYAILI 379

Query: 171 HALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           H+L +   + +A  +  R R     +T   YN+LI+ C + DDL+ A+  +S+M + G  
Sbjct: 380 HSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLT 439

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            +  +YS VI  L R   +  ++  +L++++    +  +      +I GF KA    +A 
Sbjct: 440 PNAASYSPVIAGLCRKGDLSGAV--ELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEAS 497

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           R         L P   T+ AVI      G   +A  +++++   GL P    Y +L+ G 
Sbjct: 498 RLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGL 557

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
                   A+  V+++E +  + ++ + + L+  +   GR   A  V  EM +   K + 
Sbjct: 558 CLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDL 617

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             ++ I+     + + +++  + +EMK  GV PD  F+  MI+ + K   +  A+  +D 
Sbjct: 618 ISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDE 677

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+++G  P+T+T+  L++   K      AE L +EM    + P + T+N  ++    +  
Sbjct: 678 MIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGN 737

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            E  K L   M  QG L N+V+  TL+  + + G+  +AI+ +   ++           +
Sbjct: 738 LETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTE-----------N 785

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           G  P  ++ +++I+   +     EA  +   M   G+KPD+V Y  L++
Sbjct: 786 GFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIR 834



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/539 (22%), Positives = 229/539 (42%), Gaps = 69/539 (12%)

Query: 163 ELLYSIL-IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           ++L+S++ I     +  L++  L S    L    Y A I A     +L+ A  L+++M+ 
Sbjct: 167 QILFSLVKIRQFALARHLFDGMLHSG-VLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQD 225

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQK---LYKEIECDKIELDGQLLNDVIVGFAKA 278
           +G     + Y+++I  L +  ++  ++  K   L + +  D++         ++ GF + 
Sbjct: 226 EGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTC-----RTLVYGFCRT 280

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            +   A+   G    +G  P  A  + ++  L   GR  EA  +  +L E  + P   AY
Sbjct: 281 EELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAY 340

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL    K G   +A+ +V+EM   G+ P+E TY++LI +    G  + A  +L  M  
Sbjct: 341 NALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMRE 400

Query: 399 SHAK-----------------------------------PNSFIYSRILAGYRDRGEWQR 423
              +                                   PN+  YS ++AG   +G+   
Sbjct: 401 KGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSG 460

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ ++M   GV  +T+ +  +I+ F K   +  A   F++M    +EP+ +T+N +I+
Sbjct: 461 AVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIE 520

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            +   G   +A +L+++M  RG  P   TY  +I+ L   +     K  + ++     + 
Sbjct: 521 GYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVL 580

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGL------------------------SDQAVNAF 579
           N  + T L+  + + GR  +A      +                        S+++   F
Sbjct: 581 NKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLF 640

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           R M+  G++P N+    +IN + ++    +A      M  +G  P+ VTYT L+  L +
Sbjct: 641 REMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCK 699



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 167/413 (40%), Gaps = 13/413 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++ SL +  +   +L + L+  +    + LD  +    I  + +  +   A   +   
Sbjct: 166 SQILFSLVKIRQF--ALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARM 223

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           Q  G       Y  +I  L  + R  EA  V   +   G+         L+ G+ +   L
Sbjct: 224 QDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEEL 283

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  +  +M R G +P E   S ++D     GR E A  +  ++      PN F Y+ +
Sbjct: 284 DMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNAL 343

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           L      G +    +++ EM   G+EP+   Y ++I +  K   +  A+   DRM  +G+
Sbjct: 344 LNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGV 403

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
                 +N+LI+C  K    D A     EM E G  P   +Y+ +I  L  +        
Sbjct: 404 RMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVE 463

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +G+  N  T+T L++ + ++ +            D+A   F  M    L+P+ 
Sbjct: 464 LHRKMAEKGVAWNTYTFTALINGFCKAKKM-----------DEASRLFNKMTESNLEPNE 512

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  N++I  +       +AF +   M   GL PD  TY +L+  L   D   K
Sbjct: 513 VTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASK 565



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 146/348 (41%), Gaps = 11/348 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y A I A         A+ +   +++ G K     YN L+ G  K   +++A  V + M
Sbjct: 199 VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSM 258

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              GV  DE T   L+  +      + A  +  +M      P+    S +L G R +G  
Sbjct: 259 LARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRV 318

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +  F++  ++    + P+   YN +++   K      A    + M  +G+EP+ +T+  L
Sbjct: 319 EEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAIL 378

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    K G  D A  + + M+E+G       YN +IN   +++  +     L  M   GL
Sbjct: 379 IHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGL 438

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN  +Y+ ++           A  C +G    AV   R M   G+  +     +LIN F
Sbjct: 439 TPNAASYSPVI-----------AGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGF 487

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            + ++  EA  +   M E+ L+P+ VT+  +++    V    K F  Y
Sbjct: 488 CKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 132/322 (40%), Gaps = 37/322 (11%)

Query: 160 YSYELLYSILIHALGRSE-KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           Y+Y  L S L    G S+ K + A L +    L   +  AL+    R   L +A ++ ++
Sbjct: 548 YTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNE 607

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G   D I++++++ +  + +  + S +  L++E++   +  D      +I  ++K 
Sbjct: 608 MAMWGGKLDLISFTIIVYAALKQHDSEKSCV--LFREMKEKGVRPDNVFHTCMINMYSKE 665

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+  +A+         G  P T TY A++  L  S     AE + +E+  S   P +  +
Sbjct: 666 GNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTF 725

Query: 339 NA----------------------------------LLKGYVKMGYLKDAEFVVSEMERS 364
           N                                   L+KG+ K+G +++A  ++S    +
Sbjct: 726 NCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTEN 785

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD  +YS +I      G    A  +  EM     KP+   Y+ ++      GE  + 
Sbjct: 786 GFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKC 845

Query: 425 FQVLKEMKSSGVEPDTHFYNVM 446
             +  +M   GV+P+ H +  +
Sbjct: 846 LGIYIDMVKKGVQPNWHTHRAL 867


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 206/466 (44%), Gaps = 17/466 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+I I  L  + +L EA  L    R    P  +TYN LI    +    ++A++ + +M  
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 283

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D   Y+ +I    + + +  +   +L K+        D      +I G    GD 
Sbjct: 284 QGCLPDDFTYNTIIDGYCKISMVQEA--TELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+     AQ  G+ P    Y +++  L   G  + A  V  E+ E G  P  + YN +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  KMG + DA  V+++    G LPD  T++ LID Y    + +SA  +++ M     
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P++  Y+ +L G    G+     +  +EM   G  P+   YN++I+ F + N +  A  
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
              +M  EG+ PD +++NTLI    + G  + A  LF++++E+GY     T+N +I    
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            +      +++   M ++G   +  TY  L+D             C     D+A      
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLID-----------GSCKTANVDRAYMHLVE 630

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           M   G  PS      +IN+   + R  +A  ++  M + G+ P+VV
Sbjct: 631 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 676



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 167/365 (45%), Gaps = 12/365 (3%)

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  +AG   +A+R +   +   + P   TY  +I  L       EA      +   G 
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN ++ GY K+  +++A  ++ +    G +PD+ TY  LI+     G  E A  
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  E +    KP+  +Y+ ++ G   +G      QV+ EM   G  PD   YN++I+   
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A    +  + +G  PD  T+NTLID + K  + D A +L E M E G  P T 
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 466

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN ++N L +  +  +V      M  +G  PN +TY  L++ + +S + ++A + +  +
Sbjct: 467 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 526

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S +           GL P  ++ N+LI  F  +     A+ + Q ++E G      T+ T
Sbjct: 527 SQE-----------GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 575

Query: 632 LMKAL 636
           L+ A 
Sbjct: 576 LIGAF 580



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 203/468 (43%), Gaps = 26/468 (5%)

Query: 188 RQRLTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFIN--YSLVIQSLTRT 241
           R RL+P T    Y A I A AR   L  A++   +M  D + C      Y+ ++ +L   
Sbjct: 41  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERM--DLFACPPAAPAYNAIMDALVDA 98

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
              D +   K+Y  +    +  D       +  F        A+R L      G      
Sbjct: 99  AYHDQA--HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AV 152

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  V+  L   G T +A  +F+++  + + P   A+N +L    K G + +A  ++ ++
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 212

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G+  +  TY++ I     AGR   A  ++  M  ++A P+   Y+ ++ G   +   
Sbjct: 213 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMP 271

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q     L+ M + G  PD   YN +ID + K + +  A       + +G  PD +T+ +L
Sbjct: 272 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 331

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+     G  +RA ELF E Q +G  P    YN ++  L  Q       +++  M  +G 
Sbjct: 332 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P++ TY  +++   + G   DA   +            +M+  G  P     N+LI+ +
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMND---------AIMK--GYLPDVFTFNTLIDGY 440

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  +   A  +++ M E G+ PD +TY +++  L +  K ++V  ++
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 488


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 220/466 (47%), Gaps = 26/466 (5%)

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I A  + D    A  + +KM++  Y  + +  + ++ SL R     S LL +   ++  D
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLAR---QVLKD 203

Query: 260 KIEL----DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
            I+L    +    N +I G+        A+ ++      G  P T +Y  ++ AL     
Sbjct: 204 SIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRL 263

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +  ++K  GL P    YN L+ GY ++G LK+A  V+  M R+ +LP   TY++
Sbjct: 264 LQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNM 323

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG---YRDRGEWQRTFQVLKEMK 432
           L++ + N G+ + A  +  EME  +  P+   Y+ ++ G   +RD  E    + +++EM 
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSE---VYSLIEEMD 380

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV+ +   YN+++    K   +  A    D+M   G+ PD +T+NTLI  + K G+  
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A  + +EM  +G    T T N +++ L  +++ ++   LL +   +G + + V+Y  L+
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                 G F D         D+A+N +  M+   + PS +  NS+I    + ++  +A  
Sbjct: 501 -----LGYFKDE------KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAID 549

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY--LFFNIYK 656
            L  M ENGL PD  TY  ++          K F  +  +  N++K
Sbjct: 550 KLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK 595



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/493 (22%), Positives = 215/493 (43%), Gaps = 19/493 (3%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y++L+    R   L EA     +  R  L P   TYN L++    +  +++A  +  +M 
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + Y+ +I   ++    DSS +  L +E++   ++ +    N ++    K G+
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWR--DSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A   L   +  GLSP   TY  +I A   +G+  +A  + +E+   GLK  T   N 
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L        L +A  ++    + G + DE +Y +LI  Y    + + A  +  EM+   
Sbjct: 464 ILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQ 523

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P++  Y+ ++ G     +  +    L EM  +G+ PD   YN++I  F     +  A 
Sbjct: 524 IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAF 583

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+    +PD  T N L+    + G  ++A +LF  +  +G      TYN +I+ L
Sbjct: 584 QFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSL 643

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV---- 576
            ++ ++E+   LL  M A+ L P+  TY  ++     +GR  +A E    + +  +    
Sbjct: 644 CKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQ 703

Query: 577 --------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                   N      ++     ++A +  IN      +  +A  +   + + G+  +  T
Sbjct: 704 NLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYT 763

Query: 629 YTTLMKALIRVDK 641
           Y  LM+ LI+  K
Sbjct: 764 YLNLMEGLIKRRK 776


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 224/528 (42%), Gaps = 100/528 (18%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK--IDSSLL 249
           T ++YN +IS  A  D +++A    + M  +G   D I ++ +I    +  +  +   LL
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA----TYAA 305
            +  K    D       L   VI G+ KAGD       L       ++PK +    +Y  
Sbjct: 66  NQALKRFRPDVF-----LYTSVIHGYCKAGD-------LDTGYFRAVTPKASLDVISYTT 113

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG---------------- 349
           VI  L++S R  EA  +FEELK +G  P   AY A++ G +K G                
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 350 -------------------YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
                               L DA  V  +M + G +PD  TY+ LID ++ A + + AR
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 391 I-----------------------------------VLKEMEVSHAKPNSFIYSRILAGY 415
                                               V+ +M     +P  FI++ +L+ Y
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
             +G  +  +QVL EM + G  PD   Y  +ID       +  A   FD M+ +G  PD 
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +T+ T+I    K G  + A E+ E M + G  P    YN +++   + ER +    +   
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM-RTDGLKPSNLAL 594
           M A G+ PN VT+  L+      G F D      G +D+A + F+ M   + + P+ ++ 
Sbjct: 414 MVASGIKPNAVTFNVLM-----HGLFKD------GKTDRAFSLFKEMLEKEEVPPTLVSY 462

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             LI+  G+  R +EAF   Q M + G+ P+  TYT+L+ +L +  + 
Sbjct: 463 TILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 510



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/530 (24%), Positives = 223/530 (42%), Gaps = 86/530 (16%)

Query: 164 LLYSILIHALGRSEKLYEAFL--LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
            LY+ +IH   ++  L   +   ++ +  L  ++Y  +I   A +  +++A  L  +++ 
Sbjct: 77  FLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKT 136

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK---------IELDG----QLL 268
            G   + + Y+ VI  L +  +I+  L  K ++E+             + +DG    Q+L
Sbjct: 137 AGCSPNVVAYTAVIDGLLKAGRIEDGL--KNFEEMSGSSCVPTRTTYTVVIDGLCKAQML 194

Query: 269 ND----------------------VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            D                      +I GF+KA    +A + L +    G  P   TY ++
Sbjct: 195 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 254

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +          EA+ V  +++E G +P    + +LL  Y+  G  ++A  V++EM   G 
Sbjct: 255 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 314

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD   Y+ LID   + GR   AR V   M      P++  Y  I+  +   G  +   +
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L+ M  SGV PD   YN ++D + K   +  A   +DRM++ GI+P+ +T+N L+   F
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434

Query: 487 KCGRYDRAEELFEEMQE------------------------------------RGYFPCT 510
           K G+ DRA  LF+EM E                                    RG  P  
Sbjct: 435 KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPEC 494

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY  +I  L +  R  + K+L+ +M   G+ P+V  Y+ L+     +G  D +      
Sbjct: 495 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI-----TGLIDSS------ 543

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
           + D A + F+ M   G  P+ +    L   F    R  +  AV Q+  + 
Sbjct: 544 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQG 593



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 8/408 (1%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C      Y+++I  L +++ L +A   F    ++   P  +TY  LI   ++   +++A 
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+  M   G     + Y  ++    + + I+ +  +++  ++     E    +   ++ 
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA--KEVIAQMRERGCEPGLFIFTSLLS 291

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +   G A +A + L      G +P    Y ++I  L ++GR  EA  VF+ + E G  P
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  +++ + K+G ++ A  ++  M +SGV PD   Y+ L+D Y    R + A  V 
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 411

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGK 452
             M  S  KPN+  ++ ++ G    G+  R F + KEM +   V P    Y ++ID  GK
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A   F  M+  GI P+  T+ +LI    K GR   A++L E+M + G  P    
Sbjct: 472 AGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQA 531

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           Y+ +I  L +    +    +   M  +G  PN VTY  L   +  +GR
Sbjct: 532 YSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 31/348 (8%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P   +YN ++ G   +  + +A    + M  +G  PD   ++ LI  +  AG+ +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L +  +   +P+ F+Y+ ++ GY   G+    +      K+S    D   Y  +I  
Sbjct: 62  HKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKAS---LDVISYTTVIKG 117

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 +  A   F+ + + G  P+ + +  +ID   K GR +   + FEEM      P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            TTY ++I+ L + +   D  ++   M  +G +P+ +TYTTL+D + ++ + D+A + L+
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 570 ------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                    + ++A      MR  G +P      SL++ +    
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
           R  EA+ VL  M   G  PDV+ YT+L+  L    RV +   VF S +
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 12/328 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GRSEKLYEAF 183
           A  + S++   C  +  I+ A  V++ +++        +  S+L + L  GR+E+ Y+  
Sbjct: 248 AVTYGSIVHGFCKLDM-INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 306

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
                +   P  + Y +LI        + +A ++   M + G   D + Y  +IQ+ ++ 
Sbjct: 307 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 366

Query: 242 NKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
             ++++  +L+ + K      +  D    N ++ G+ K     +A          G+ P 
Sbjct: 367 GNVEAAGEILELMAKS----GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422

Query: 300 TATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
             T+  ++  L   G+T  A ++F+E L++  + P   +Y  L+ G  K G + +A    
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM   G++P+ HTY+ LI + A AGR   A+ ++++M      P+   YS ++ G  D 
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS 542

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
                 + V +EM   G  P+   Y V+
Sbjct: 543 SMVDTAWDVFQEMMKRGCAPNEVTYKVL 570



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 10/297 (3%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           AY V++ +     C    +LY+ LI  L   GR  +    F     +   P  LTY  +I
Sbjct: 302 AYQVLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
              ++  ++E A  ++  M + G   D   Y+ ++    +  ++D +    +Y  +    
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF--GVYDRMVASG 418

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           I+ +    N ++ G  K G   +A   F  M +   + P   +Y  +I  L  +GR  EA
Sbjct: 419 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
              F+E+ + G+ P    Y +L+    K G + +A+ +V +M + GV PD   YS LI  
Sbjct: 479 FLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
             ++   ++A  V +EM      PN   Y  +  G+R  G      + +K+  S GV
Sbjct: 539 LIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR-ALDLEAVKQHFSQGV 594


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 212/443 (47%), Gaps = 16/443 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY A++    +  + +  L    KM         + Y++++  L + +K++ +    ++
Sbjct: 107 VTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERAC--DVF 164

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+     + D    + +I G +KAG   +A + + +    G  P    Y +++  L   
Sbjct: 165 EEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKC 224

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA    +E++   L+PR   Y+ ++ GY+ MG +++A  V+ EM      PD  +Y
Sbjct: 225 GRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISY 284

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++ I+A  + GR E A  V + M     KP+   Y  I+  +   G       VL+ M  
Sbjct: 285 TMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 344

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           + V+P+ + Y +++D F K + L  A+  + R+L +GI P T+T+NT+I+   K  + D 
Sbjct: 345 AAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDE 404

Query: 494 AEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           A EL  EMQ R     P   TY+++I+ LG+    E    LL  M   G++P+  TYT+L
Sbjct: 405 ALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSL 464

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +     +G+   A+E LE            M   G+ P +    +L+        DA A+
Sbjct: 465 IQTLAGAGKVSRAMELLEE-----------MLKAGIFPDDHTYGTLVQILCRSDVDA-AW 512

Query: 612 AVLQYMKENGLKPDVVTYTTLMK 634
            +LQ M  NG  P+  T+  + K
Sbjct: 513 DLLQEMMRNGHTPNEFTFKAVEK 535



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 212/487 (43%), Gaps = 24/487 (4%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+ AL R  +L +A    Q     P   ++N L+   A  DD E    L+ +M+  G   
Sbjct: 3   LLLALVRGGQLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITS 62

Query: 227 DFINYSLVIQSLTRTNKIDSSL---------LQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +   + +++ +L     +D ++           +L++ IE      D      ++ G  K
Sbjct: 63  NGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAP----DSVTYTAIVDGLFK 118

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG+    + +          P   TY  ++  L  + +   A  VFEE+   G KP   A
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y++L+ G  K G + +A  +V  M   G  P    Y+ ++      GR + A   ++EM 
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P    YS I+ GY   G+ +  F V++EM      PDT  Y + I+         
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRRE 298

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ M+ +G +PD  T+  +ID   K G    A  +   M +    P    Y +++
Sbjct: 299 EAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIM 358

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +   +  R E+   L   +   G+LP+ VTY T+++   +  + D+A+E L  +      
Sbjct: 359 DGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ----- 413

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                R + L+PS +  + +I+  G+   +  AF +L  M +NG+ PD  TYT+L++ L 
Sbjct: 414 ----RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLA 469

Query: 638 RVDKFHK 644
              K  +
Sbjct: 470 GAGKVSR 476



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 166/381 (43%), Gaps = 44/381 (11%)

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++ AL   G+  +A   F+    S  +P   ++N LL+G+      +    ++ EM+  
Sbjct: 2   SLLLALVRGGQLSDALGFFQS---SISEPNVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 365 GVLPDEHTYSLLIDA------------YANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           G+  +  T+ +++ A            Y N+   E+ R+     E   A P+S  Y+ I+
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRL----FEAIEA-PDSVTYTAIV 113

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G    G +    +  ++M +S  EP    Y V++D   K + +  A   F+ M+ +G +
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHK 173

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD I +++LID   K GR D A +L + M  RG  P    Y  ++  L +  R ++  + 
Sbjct: 174 PDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 233

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------- 573
           +  MR + L P V TY+ +V  Y   G+ ++A   +E ++D                   
Sbjct: 234 IQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYS 293

Query: 574 -----QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                +A   F  M   G KP       +I+ F ++   A A  VL+ M +  +KP+   
Sbjct: 294 IGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYI 353

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           YT +M   ++  +  +    Y
Sbjct: 354 YTMIMDGFVKSSRLEEALELY 374


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 224/523 (42%), Gaps = 21/523 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYEAF 183
           H L++ +  ++  +++      W  K          Y  LIH L      G   K+ +  
Sbjct: 90  HWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEM 149

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           + S    +TP+  + +I        + KA+ +  +++          Y+ +I  L    +
Sbjct: 150 VRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQ 209

Query: 244 IDSSLLQKLYKEIECD-KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +   + +LY E+  +   + D    + +I  F K G    A+R L   +  G+ P    
Sbjct: 210 YEK--VHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I+          A ++FEE++    +P    Y  L++G  K G + +A     EM+
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEW 421
           R G  PD    + +I+    AGR +    + +EM VSH  PN   Y+ I+ A +  +   
Sbjct: 328 REGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRV 387

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              F   + MK SG+ P    Y+++ID F K N +  AM   + M  +G  P    + +L
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K  RYD A ELF+E++E         Y +MI  LG+  R +D   L   M   G 
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGC 507

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNV  Y  L+    ++        C   + D+A+   R M+  G  P   + N ++N  
Sbjct: 508 TPNVYAYNALMSGLARA--------C---MLDEALTTMRKMQEHGCLPDINSYNIILNGL 556

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +      A  +L  MK + +KPD V+Y T++ AL     F +
Sbjct: 557 AKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEE 599



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 194/422 (45%), Gaps = 19/422 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +Y  +  +LIH  G+ EK++E +  +S      P  +TY+ALISA  +    + A+ L++
Sbjct: 196 AYNSMIIMLIHE-GQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLN 254

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M+++G       Y+++I    + + +  +L   L++E+       D     ++I G  K
Sbjct: 255 EMKENGMQPTAKIYTMIISLFFKLDNVHGAL--SLFEEMRYMYCRPDVFTYTELIRGLGK 312

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A  F    Q  G  P T     +I  L  +GR  +   +FEE+  S   P    
Sbjct: 313 AGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVT 372

Query: 338 YNALLKGYVKMGYLKDAEFVVSE-------MERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           YN ++K       L +++  VSE       M+ SG+ P   TYS+LID +    R E A 
Sbjct: 373 YNTIIKA------LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAM 426

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++L+EM+     P    Y  ++        +    ++ +E+K +        Y VMI   
Sbjct: 427 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL 486

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           GK   L  A+  FD M   G  P+   +N L+    +    D A     +MQE G  P  
Sbjct: 487 GKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDI 546

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +YNI++N L +         +L NM+   + P+ V+Y T++     +G F++A E ++ 
Sbjct: 547 NSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKE 606

Query: 571 LS 572
           ++
Sbjct: 607 MN 608



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 186/408 (45%), Gaps = 14/408 (3%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C    + YS LI A   LGR +         +   + P    Y  +IS   + D++  AL
Sbjct: 226 CQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGAL 285

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L  +MR      D   Y+ +I+ L +  +ID +     Y E++ +  + D  ++N++I 
Sbjct: 286 SLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAY--HFYHEMQREGCKPDTVVMNNMIN 343

Query: 274 GFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKES 329
              KAG   D  K    +G++  +   P   TY  +I AL  S  R  E  + FE +K S
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCI---PNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LIDA   A R++ A
Sbjct: 401 GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + +E++ +    ++ +Y+ ++      G       +  EM   G  P+ + YN ++  
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +   L  A+    +M   G  PD  ++N +++   K G   RA E+   M+     P 
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +YN +++ L     +E+   L+  M A G   +++TY+++++  G+
Sbjct: 581 AVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 223/503 (44%), Gaps = 39/503 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
           +S L   + R+++      L ++  L  + +N      +I+ C R   L  A + M K+ 
Sbjct: 75  FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLNDVIVGFA 276
           + GY  D + +S +I  L    ++  +L      E+    +E+  +     LN ++ G  
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEAL------ELVDRMVEMGHKPTLITLNALVNGLC 188

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
             G  S A+  +      G  P   TY  V+  +  SG+T  A  +  +++E  +K    
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y+ ++ G  K G L +A  + +EME  G   D   Y+ LI  +  AGRW+    +L++M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   +S ++  +   G+ +   ++ KEM   G+ PDT  Y  +ID F K N L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A    D M+S+G  P+  T+N LI+ + K    D   ELF +M  RG    T TYN +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS---- 572
           I    E  + E  K L   M ++ + P++V+Y  L+D    +G  + A+E  E +     
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 573 --------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                               D A + F  +   G+KP     N +I    +    +EA  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 613 VLQYMKENGLKPDVVTYTTLMKA 635
           + + M+E+G  P+  TY  L++A
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRA 571



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 194/427 (45%), Gaps = 13/427 (3%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           + A++L  +M +       I++S +   + RT + D  L+  L K++E   I  +   L+
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I    +    S A   +G    +G  P T T++ +I  L   GR  EA  + + + E 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G KP     NAL+ G    G + DA  ++  M  +G  P+E TY  ++     +G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L++ME    K ++  YS I+ G    G     F +  EM+  G + D   Y  +I  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F               M+   I PD + ++ LIDC  K G+   AEEL +EM +RG  P 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T TY  +I+   ++ + +    +L  M ++G  PN+ T+  L++ Y ++   DD +E   
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE--- 408

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    FR M   G+    +  N+LI  F E  +   A  + Q M    ++PD+V+Y
Sbjct: 409 --------LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460

Query: 630 TTLMKAL 636
             L+  L
Sbjct: 461 KILLDGL 467



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 46/428 (10%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L++ L  + K+ +A LL  R   T      +TY  ++    ++     A+ L+ KM +  
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---D 280
              D + YS++I  L +   +D++    L+ E+E    + D  +   +I GF  AG   D
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAF--NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 281 ASKAMRFL---------------------------------GMAQGVGLSPKTATYAAVI 307
            +K +R +                                  M Q  G+SP T TY ++I
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLI 359

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                  +  +A  + + +   G  P  + +N L+ GY K   + D   +  +M   GV+
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            D  TY+ LI  +   G+ E A+ + +EM     +P+   Y  +L G  D GE ++  ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            ++++ S +E D   YN++I      + +  A   F  +  +G++PD  T+N +I    K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINL-LGEQERWEDVKRLLGNMRAQGLLPNVV 546
            G    A+ LF +M+E G+ P   TYNI+I   LGE +  +  K L+  ++  G   +  
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIKRCGFSVDAS 598

Query: 547 TYTTLVDI 554
           T   +VD+
Sbjct: 599 TVKMVVDM 606



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 161/371 (43%), Gaps = 37/371 (9%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           ++ +L  + Y+ +I    ++  L+ A NL ++M   G+  D I Y+ +I+      + D 
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               KL +++   KI  D    + +I  F K G   +A          G+SP T TY ++
Sbjct: 301 G--AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I       +  +A  + + +   G  P  + +N L+ GY K   + D   +  +M   GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           + D  TY+ LI  +   G+ E A+ + +EM     +P+   Y  +L G  D GE ++  +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 427 VLKEMKSS-----------------------------------GVEPDTHFYNVMIDTFG 451
           + ++++ S                                   GV+PD   YN+MI    
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A   F +M  +G  P+  T+N LI  H   G   ++ +L EE++  G+    +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 512 TYNIMINLLGE 522
           T  +++++L +
Sbjct: 599 TVKMVVDMLSD 609



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 149/327 (45%), Gaps = 11/327 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F+E+  S  +PR   ++ L     +         +  +ME  G+  + +T S++I
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +      +   A   + ++     +P++  +S ++ G    G      +++  M   G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P     N +++       +  A+   DRM+  G +P+ +T+  ++    K G+   A EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M+ER        Y+I+I+ L +    ++   L   M  +G   +++ YTTL+  +  
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR+DD  + L  +  + +            P  +A ++LI+ F ++ +  EA  + + M
Sbjct: 295 AGRWDDGAKLLRDMIKRKIT-----------PDVVAFSALIDCFVKEGKLREAEELHKEM 343

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
            + G+ PD VTYT+L+    + ++  K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDK 370


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 206/466 (44%), Gaps = 17/466 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+I I  L  + +L EA  L    R    P  +TYN LI    +    ++A++ + +M  
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 284

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D   Y+ +I    + + +  +   +L K+        D      +I G    GD 
Sbjct: 285 QGCLPDDFTYNTIIDGYCKISMVQEA--TELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+     AQ  G+ P    Y +++  L   G  + A  V  E+ E G  P  + YN +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  KMG + DA  V+++    G LPD  T++ LID Y    + +SA  +++ M     
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P++  Y+ +L G    G+     +  +EM   G  P+   YN++I+ F + N +  A  
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
              +M  EG+ PD +++NTLI    + G  + A  LF++++E+GY     T+N +I    
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            +      +++   M ++G   +  TY  L+D             C     D+A      
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLID-----------GSCKTANVDRAYMHLVE 631

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           M   G  PS      +IN+   + R  +A  ++  M + G+ P+VV
Sbjct: 632 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 677



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 167/365 (45%), Gaps = 12/365 (3%)

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  +AG   +A+R +   +   + P   TY  +I  L       EA      +   G 
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN ++ GY K+  +++A  ++ +    G +PD+ TY  LI+     G  E A  
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  E +    KP+  +Y+ ++ G   +G      QV+ EM   G  PD   YN++I+   
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A    +  + +G  PD  T+NTLID + K  + D A +L E M E G  P T 
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 467

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN ++N L +  +  +V      M  +G  PN +TY  L++ + +S + ++A + +  +
Sbjct: 468 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 527

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S +           GL P  ++ N+LI  F  +     A+ + Q ++E G      T+ T
Sbjct: 528 SQE-----------GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 576

Query: 632 LMKAL 636
           L+ A 
Sbjct: 577 LIGAF 581



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 203/468 (43%), Gaps = 26/468 (5%)

Query: 188 RQRLTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFIN--YSLVIQSLTRT 241
           R RL+P T    Y A I A AR   L  A++   +M  D + C      Y+ ++ +L   
Sbjct: 42  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERM--DLFACPPAAPAYNAIMDALVDA 99

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
              D +   K+Y  +    +  D       +  F        A+R L      G      
Sbjct: 100 AYHDQA--HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AV 153

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  V+  L   G T +A  +F+++  + + P   A+N +L    K G + +A  ++ ++
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 213

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G+  +  TY++ I     AGR   A  ++  M  ++A P+   Y+ ++ G   +   
Sbjct: 214 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMP 272

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q     L+ M + G  PD   YN +ID + K + +  A       + +G  PD +T+ +L
Sbjct: 273 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 332

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+     G  +RA ELF E Q +G  P    YN ++  L  Q       +++  M  +G 
Sbjct: 333 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P++ TY  +++   + G   DA   +            +M+  G  P     N+LI+ +
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMND---------AIMK--GYLPDVFTFNTLIDGY 441

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  +   A  +++ M E G+ PD +TY +++  L +  K ++V  ++
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 489


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 224/481 (46%), Gaps = 18/481 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           ++ ++ +L +++    A  L Q+  L  +     T+N LI+  ++      + ++ +K+ 
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GYH   I ++ +I+ L     I  +L    + ++      LD      +I G  K G 
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQAL--HFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A++ L    G  + P    Y  +I  +  +    +A  ++ ++    + P    YNA
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+  +  L  A  + ++M++  + P+ +T+++L+D +   G+   A++VL  M    
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+   Y+ ++ GY    +  +   +   M S GV  +   Y  M++ F K   +  A+
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAI 361

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ M    I P+ +T+++LID   K GR   A +L +EM +RG  P   TY+ +++ L
Sbjct: 362 NLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDAL 421

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +    +    LL N++ QG+ P++ TYT L+    QSGR +D           A N F 
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED-----------AQNVFE 470

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            +   G      A   +I  F +     +A A+L  M++NG  P+  TY  ++ +L   D
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKD 530

Query: 641 K 641
           +
Sbjct: 531 E 531



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 207/488 (42%), Gaps = 20/488 (4%)

Query: 165 LYSILIHALGRSEKLYEAF--LLSQRQRLTP-LTYNALISACARNDDLEKALNLMSKMRQ 221
           L+S L H       L  +F  LL  +    P   +N ++S+  +      AL+L  +M  
Sbjct: 30  LFSQLHHKQDEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMEL 89

Query: 222 DGYHCDFINYSLVIQSLTRT--NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +G   DF  ++++I   ++   N +  S+  K+ K+             N +I G    G
Sbjct: 90  NGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKK----GYHPTAITFNTLIKGLCLKG 145

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+ F       G      +Y  +I  L   GR   A  + + +    ++P    YN
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++    K   + DA  + S+M    + PD  TY+ LI  ++   +   A  +  +M+  
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE 265

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           +  PN + ++ ++ G+   G+      VL  M    ++PD   YN ++D +   N ++ A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD M S G+  +   + T+++   K    D A  LFEEM+ R   P   TY+ +I+ 
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +  R     +L+  M  +G  PN+VTY++++D   ++   D AI  L  L DQ     
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQ----- 440

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                 G++P       LI    +  R  +A  V + +   G   DV  YT +++     
Sbjct: 441 ------GIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494

Query: 640 DKFHKVFS 647
             F K  +
Sbjct: 495 GFFDKALA 502



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 172/382 (45%), Gaps = 7/382 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  ++  A  L +R   + + P  + YN +I    +   +  A +L S+M 
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D   Y+ +I   +  +K++ ++   L+ +++ + I  +    N ++ GF K G 
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAI--DLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A   L +     + P   TY +++    +  +  +A+ +F+ +   G+    + Y  
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+ K+  + +A  +  EM    ++P+  TYS LID     GR   A  ++ EM    
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS IL          +   +L  +K  G+ PD + Y ++I    +   L  A 
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ +L +G   D   +  +I      G +D+A  L  +M++ G  P   TY ++I  L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526

Query: 521 GEQERWEDVKRLLGNMRAQGLL 542
            E++  +  ++LL  M  +GLL
Sbjct: 527 FEKDENDTAEKLLREMIVRGLL 548



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/234 (19%), Positives = 95/234 (40%), Gaps = 19/234 (8%)

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA-------MAAFDRML-SEGIEPDT 475
           +F   + +  S   P+ +F  +   +   ++ LHH        +++F+ +L  +   P T
Sbjct: 2   SFSAFRYVVISNFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPT 61

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             +N ++    K   +  A  L ++M+  G      T+NI+IN   +         +   
Sbjct: 62  FQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAK 121

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           +  +G  P  +T+ TL+      G       CL+G   QA++    +   G     ++  
Sbjct: 122 ILKKGYHPTAITFNTLI-----KGL------CLKGHIHQALHFHDKVVAQGFHLDQVSYG 170

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +LIN   +  R   A  +L+ +    ++P+ V Y  ++  + +    +  F  Y
Sbjct: 171 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 186/405 (45%), Gaps = 36/405 (8%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            D +    + G+  +A+R +G A+     P   T AA+I  LS SGRT EA  V      
Sbjct: 69  GDRLRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVL----- 119

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +   P   AYNA++ GY   G L  A  +V+EM    V PD +TY+ LI      GR  +
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 176

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  VL EM      P+   Y+ +L     R  +++  ++L EM+  G  PD   YNV+++
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   +  A+     + S G EP+T+++N ++       R++ AEEL  EM ++G  P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
              T+N++I+ L  +   E    +L  +   G  PN ++Y  L+  + +  + D A+   
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 567 ----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
                                 C  G  D AV     ++  G  P  ++ N++I+   + 
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  EA  +L  M   GL+PD++TY+T+   L R D+      ++
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 461



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 195/410 (47%), Gaps = 16/410 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+ ++       ++D++  ++L  E+    +E D    N +I G    G  + A+ 
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAA--RRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L         P   TY  ++ A        +A  + +E+++ G  P    YN ++ G  
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G + DA   +  +   G  P+  +Y++++     A RWE A  ++ EM      PN  
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +++    +G  +   +VL+++   G  P++  YN ++  F K   +  AMA  D M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +S G  PD +++NTL+    + G  D A EL  +++++G  P   +YN +I+ L +  + 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   LL  M ++GL P+++TY+T+     +  R +DAI            AF  ++  G
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR-----------AFGKVQDMG 468

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           ++P+ +  N++I    + +    A  +  YM  NG  P+  TYT L++ L
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 185/450 (41%), Gaps = 41/450 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++   C +   +D A  +V+ +      Y+Y  L   L    GR+           R
Sbjct: 129 YNAMVAGYCGAGQ-LDAARRLVAEMPVEPDAYTYNTLIRGLC-GRGRTANALAVLDEMLR 186

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R  P  +TY  L+ A  +    ++A+ L+ +MR  G   D + Y++V+           
Sbjct: 187 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN---------- 236

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                      G  + G    A+ FL      G  P T +Y  V
Sbjct: 237 ---------------------------GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 269

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L  + R  +AE +  E+ + G  P    +N L+    + G ++ A  V+ ++ + G 
Sbjct: 270 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 329

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  +Y+ L+ A+    + + A   L  M      P+   Y+ +L      GE     +
Sbjct: 330 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 389

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L ++K  G  P    YN +ID   K      A+   + M+S+G++PD IT++T+     
Sbjct: 390 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 449

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  R + A   F ++Q+ G  P T  YN +I  L ++        L   M   G +PN  
Sbjct: 450 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 509

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           TYT L++     G   +A + L+ L  + V
Sbjct: 510 TYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 9/244 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----F 183
           ++ L+  LC     ++ A  V+  + K+  C    L Y+ L+HA  + +K+ +A      
Sbjct: 301 FNMLISFLCR-KGLVEPALEVLEQIPKYG-CTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++S+      ++YN L++A  R+ +++ A+ L+ +++  G     I+Y+ VI  LT+  K
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +L  +L  E+    ++ D    + +  G  +      A+R  G  Q +G+ P T  Y
Sbjct: 419 TKEAL--ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A+I  L     T  A  +F  +  +G  P    Y  L++G    G +K+A  ++ E+  
Sbjct: 477 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 536

Query: 364 SGVL 367
            GV+
Sbjct: 537 RGVV 540


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TY  VI+     GR  EA  VF+E+ 
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G +KP    YNAL+ GY   G L  A      M   GV     TY+LL+ A    GR 
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 637

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM      P+ F Y+ ++ G+   G  ++  ++ + M   GV      Y  +
Sbjct: 638 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 697

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +      FD  +  GI PD + +N LI+ H   G  DRA E+  EM+++  
Sbjct: 698 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ ++L+  M  +G+ P++VTY TL+  Y   G   DA+ 
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + ++ +N        G  P+ L  N+LI    ++ +  +A  +++ M ENG+ PD 
Sbjct: 818 ----IRNEMMNK-------GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 867 STYISLIEGLTTEDE 881



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 5/391 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ-DG 223
           ++I++  L  + K   A  LL Q  R   +TYN +I+       ++ AL++M +MR+  G
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 545

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDAS 282
              +   Y  VI    +  ++D ++  K++ E +   +++ +  + N +I G+   G   
Sbjct: 546 IAPNQYTYGTVISGWCKVGRVDEAV--KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 603

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ +       G++   ATY  ++ AL   GR  EA  + EE+   GL P    YN L+
Sbjct: 604 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 663

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ K G +K A  +   M R GV     TY+ LI A +  G+ +    +  E      +
Sbjct: 664 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 723

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +Y+ ++  +   G   R F+++ EM+   + PD   YN ++        +  A   
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M   GI+PD +T+NTLI  +   G    A  +  EM  +G+ P   TYN +I  L +
Sbjct: 784 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             + +D + ++  M   G+ P+  TY +L++
Sbjct: 844 NGQGDDAENMVKEMVENGITPDDSTYISLIE 874



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL   GR  + YE       + L P   TYN LI+   +  +++KAL +   M 
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y+ +I +L++  ++  +   KL+ E     I  D  L N +I   + +G+
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQET--DKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + +E+ E G++P    YN 
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  + +EM   G  P   TY+ LI      G+ + A  ++KEM  + 
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 862 ITPDDSTYISLIEG 875



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M       CTTT+NIM+  L    +      LL  M      PN VTY T++  + 
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 525

Query: 557 QSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
             GR   A++                         C  G  D+AV  F  M T G +KP 
Sbjct: 526 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N+LI  + +  +   A      M E G+   V TY  L+ AL
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 203/460 (44%), Gaps = 15/460 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++        +  AL ++ +M   G       Y +++++  R+    +S+  ++ +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV--RVLE 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +      LD    N V+    + G   +A+  L      G      +Y AV+  L  + 
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  + E + +E+      P    +N L+    + G  +    V+++M   G  PD   Y+
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +ID     G  E A  +L  M     KPN   Y+ +L G      W+   ++L EM   
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
               D   +N+++D F +   +   +   ++MLS G  PD IT+ T+I+   K G  D A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L + M   G  P T +Y I++  L    RW D + L+  M  QG  PN VT+ TL++ 
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +GL +QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L
Sbjct: 471 L-----------CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             M   G+ P+ + Y+++  AL R  + +KV    +F NI
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQ--MFDNI 557



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 207/468 (44%), Gaps = 26/468 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  Y+ ++ A  R+     ++ ++  M   G   D  N +LV+ ++     +D ++   L
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV--GL 203

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +++     E D    N V+ G   A         +     V  +P   T+  +I  L  
Sbjct: 204 LRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCR 263

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G       V  ++ E G  P  + Y  ++ G  K G+L+ A  +++ M   G+ P+   
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ ++    +A RW+ A  +L EM       +   ++ ++  +   G   R  ++L++M 
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G  PD   Y  +I+ F K   +  A+     M S G +P+T+++  ++      GR+ 
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEEL  +M ++G  P   T+N +IN L ++   E    LL  M   G  P++++Y+T++
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 553 DIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLK 588
           D  G++G+ ++A+E L                        EG  ++ +  F  ++   ++
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +  N++I++  +      A     YM  NG  P+  TYT L+K L
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/542 (21%), Positives = 213/542 (39%), Gaps = 59/542 (10%)

Query: 124 VPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           VP P     +  +++ LC+     D A  V+  +     C     +Y +++ A  RS   
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIAD-ALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGF 162

Query: 180 YEAFLLSQRQRLTPLTY-----NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
             +  + +       T      N +++A      +++A+ L+ K+   G   D ++Y+ V
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           ++ L    +     +++L  E+       +    N +I    + G   +    L      
Sbjct: 223 LKGLCMAKRWGD--VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P    YA +I  +   G    A  +   +   GLKP    YN +LKG       K+A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 355 EFVVSEMERS-----------------------------------GVLPDEHTYSLLIDA 379
           E ++SEM +                                    G +PD  TY+ +I+ 
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           +   G  + A ++LK M     KPN+  Y+ +L G    G W    +++ +M   G  P+
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ + A EL  
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M  +G  P T  Y+ +   L  + R   V ++  N++   +  + V Y  ++       
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL---- 576

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C    +D+A++ F  M ++G  P+      LI     +    EA  +L  +  
Sbjct: 577 -------CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 620 NG 621
            G
Sbjct: 630 RG 631



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 184/419 (43%), Gaps = 9/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++++LK LC +    D+   +   ++    C    + ++ LI  L R+   E+++E    
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 TP    Y  +I    +   LE A  ++++M   G   + + Y+ V++ L    +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  ++L  E+      LD    N ++  F + G   + +  L      G  P   TY
Sbjct: 337 WKEA--EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI      G   EA  + + +   G KP T +Y  +LKG    G   DAE ++S+M +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+ + 
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N +I 
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    DRA + F  M   G  P  +TY ++I  L  +   ++ + LL  + ++G L
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 176/396 (44%), Gaps = 6/396 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI    RN   E+   ++++M + G   D   Y+ +I  + +   ++ +   ++ 
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA--NEIL 309

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +    ++ +    N V+ G   A    +A   L             T+  ++     +
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G       + E++   G  P    Y  ++ G+ K G + +A  ++  M   G  P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++++    +AGRW  A  ++ +M      PN   ++ ++     +G  ++  ++LK+M  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PD   Y+ +ID  GK      A+   + M+++GI P+TI ++++     + GR ++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL--LGNMRAQGLLPNVVTYTTL 551
             ++F+ +++         YN +I+ L   +RWE  + +     M + G +PN  TYT L
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLC--KRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +      G   +A E L  L  +      +MR  G+
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 208/451 (46%), Gaps = 19/451 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + +N LI+   +   +  A ++++K+ + GY  D I  +  I+      +I  +L    +
Sbjct: 106 VNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQAL--NFH 163

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++      LD      +I G  K G+   A+  L    G  +      Y+ +I ++   
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               +A  ++ E+    +      Y+AL+ G+  +G LKDA  + ++M    + PD +T+
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+DA+   GR + A+  L  M     KP+   Y+ ++ GY    E      +L  M  
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV      YN++I+ F K   +  AM  F  M  + I P+ IT+N+LID   K GR   
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL + M +RG  P   TY+ +++ L +    +    LL  ++ QG+ PN+ TYT L+D
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS---LINAFGEDQRDAEA 610
              + GR +DA    E L               +K  NL +N+   +I  F       EA
Sbjct: 464 GLCKGGRLEDARNIFEDLL--------------VKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            ++L  MK+N   PD +TY  ++ +L   D+
Sbjct: 510 LSLLSKMKDNSCIPDAITYEIIICSLFDKDE 540



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 204/434 (47%), Gaps = 15/434 (3%)

Query: 206 NDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           N+D+  A++L + + RQ+    D + +  ++ SL ++    + L   L++++E   I+ +
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPD-MEFGQILGSLVKSKHYHTVL--SLFQKMEYRGIKPN 104

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I  F + G    A   L     +G  P T T    I      G+  +A    +
Sbjct: 105 FVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHD 164

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           +L   G      +Y  L+ G  K+G  + A  ++  ++   V  D   YS +ID+     
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDK 224

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
               A  +  EM       N   YS +++G+   G+ +    +  +M S  + PD + +N
Sbjct: 225 NVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           +++D F K   +  A      M+ +GI+PD +T+N+L+D +      + A+ +   M  R
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G      +YNI+IN   + +  +   +L   M  + + PNV+TY +L+D   +SGR   A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E ++ + D+           G +P  +  +S+++A  ++    +A A+L  +K+ G++P
Sbjct: 405 LELIDLMHDR-----------GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRP 453

Query: 625 DVVTYTTLMKALIR 638
           ++ TYT L+  L +
Sbjct: 454 NMYTYTILIDGLCK 467



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 208/503 (41%), Gaps = 41/503 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  +   A  L +R      +L  + Y+ +I +  ++ ++  A +L S+M 
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 + + YS +I       K+  ++   L+ ++  + I  D    N ++  F K G 
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAI--GLFNKMTSENINPDVYTFNILVDAFCKEGR 295

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L M    G+ P   TY +++           A+++   +   G+    ++YN 
Sbjct: 296 VKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNI 355

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G+ K+  +  A  +  EM    + P+  TY+ LID    +GR   A  ++  M    
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   YS IL          +   +L ++K  G+ P+ + Y ++ID   K   L  A 
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F+ +L +G      T+  +I      G +D A  L  +M++    P   TY I+I  L
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL 535

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTL-VDIYGQSGRF--DDAIEC---------- 567
            +++  +  ++LL  M  +GLL + + Y +  +        F  +D+++C          
Sbjct: 536 FDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWA 595

Query: 568 ---LEGLSDQAVNAFRVMRTDGLKPSNLALNS------------------LINAFGEDQR 606
              LE +    V     MR   ++  ++ + S                  +I  F     
Sbjct: 596 KLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGL 655

Query: 607 DAEAFAVLQYMKENGLKPDVVTY 629
             E+ A+L  M+ NG  PD VTY
Sbjct: 656 FDESLALLSKMEVNGCIPDAVTY 678



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 145/342 (42%), Gaps = 14/342 (4%)

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           T   N+   ++A ++F  L      P    +  +L   VK  +      +  +ME  G+ 
Sbjct: 43  TTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIK 102

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+   +++LI+ +   G    A  VL ++     +P++   +  + G+  +G+  +    
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             ++ + G   D   Y  +I+   K      A+    R+  + ++ D + ++T+ID   K
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK 222

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               + A +L+ EM  R       TY+ +I+      + +D   L   M ++ + P+V T
Sbjct: 223 DKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYT 282

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           +  LVD +           C EG   +A N   +M   G+KP  +  NSL++ +      
Sbjct: 283 FNILVDAF-----------CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             A ++L  M   G+   V +Y  ++    +   VD+  K+F
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 224/468 (47%), Gaps = 36/468 (7%)

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLND 270
           + +KM++  +  + +  + ++ +L R+N   S +  +   E+  D ++L  Q      N 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSR---EVFQDAVKLGVQPNVNTFNI 216

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G+    +  +A+R +      G  P   TY  V+TAL    +  +   +  ++K SG
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L P    YN L+ GY K+ +LK+A  V+  M   G+LPD  TY+ ++    + G+ + A 
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336

Query: 391 IVLKEMEVSHAKPNSFIYSRILAG-YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +  +ME     P+   Y+ ++ G +  RG     F++++EMK+ GV+ +   +N+MI  
Sbjct: 337 RLRDKMESFKLVPDVVTYNTLIDGCFEHRGS-DAAFKLVEEMKARGVKENGVTHNIMIKW 395

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F     +  A     +M+  G  PD  T+NT+I+ + K G+   A ++ +EM  +G    
Sbjct: 396 FCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLD 455

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
           T T N +++ +  +++ +D   L    R +G + + VTY TL+  Y +  + D A++   
Sbjct: 456 TFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWE 515

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                CL G +DQAV+    +   GL P     N +I+ +  + 
Sbjct: 516 EMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEG 575

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
              +AF     M E+ LKPD+ T   L++ L R   ++K   +F++++
Sbjct: 576 AVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 221/473 (46%), Gaps = 30/473 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI     +++ E+AL L+++M + G   D + Y+ V+ +L + +++  + ++ L  
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQL--TQVRDLLL 270

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++   +  +    N ++ G+ K     +A   + +  G G+ P   TY  ++  L + G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKG-YVKMGYLKDAEF-VVSEMERSGVLPDEHT 372
           +  EA  + ++++   L P    YN L+ G +   G   DA F +V EM+  GV  +  T
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRG--SDAAFKLVEEMKARGVKENGVT 388

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++++I  +   G+ + A  V+ +M  S   P+ F Y+ ++ GY   G+    ++++ EM 
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMG 448

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G++ DT   N ++ T      L  A     +    G   D +T+ TLI  +FK  + D
Sbjct: 449 RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQAD 508

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           RA +L+EEM+E G      TYN +I  L    + +     L  +  +GL+P+  T   ++
Sbjct: 509 RALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIII 568

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
             Y   G  + A +                        C EG+ ++ +  F    + G  
Sbjct: 569 HGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKP 628

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
              +  N +I++F +++R  +AF ++  M+   L+PD  TY  ++  L +  +
Sbjct: 629 MDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGR 681



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 211/485 (43%), Gaps = 15/485 (3%)

Query: 166 YSILIHALGRSEKLYEAF----LLSQRQRLTPL-TYNALISACARNDDLEKALNLMSKMR 220
           Y+IL+H   + + L EA     L++ +  L  + TYN ++        +++A+ L  KM 
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D + Y+ +I         D++   KL +E++   ++ +G   N +I  F   G 
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAF--KLVEEMKARGVKENGVTHNIMIKWFCTEGK 401

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +      G SP   TY  +I     +G+  EA  + +E+   GLK  T   N 
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL        L DA  +  +  + G + DE TY  LI  Y    + + A  + +EM+ + 
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
                  Y+ I+ G    G+  +    L E+   G+ PD    N++I  +     +  A 
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAF 581

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              ++M+   ++PD  T N L+    + G  ++   LF     +G    T TYNI+I+  
Sbjct: 582 QFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSF 641

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++ R ED   L+  M  + L P+  TY  +V    ++GR ++A    E L+ +     +
Sbjct: 642 CKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA----EKLALKFAEKGQ 697

Query: 581 VMRTDGLKP----SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            ++T    P    S++  +  I++     +  +A  + Q  ++ G+  +  TY  LM  L
Sbjct: 698 QVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757

Query: 637 IRVDK 641
           ++  K
Sbjct: 758 LKRRK 762



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 23/311 (7%)

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWES---ARIVLKEMEVSHAKPNSFIYSRILA 413
           + ++M+R    P+  T + L++A   +    S   +R V ++      +PN   ++ ++ 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY      +   +++ +M   G  PD   YN ++    K + L        +M + G+ P
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +  T+N L+  + K      A E+ E M  +G  P   TYN M+  L ++ + ++  RL 
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M +  L+P+VVTY TL+D     G F+       G SD A      M+  G+K + + 
Sbjct: 340 DKMESFKLVPDVVTYNTLID-----GCFEH-----RG-SDAAFKLVEEMKARGVKENGVT 388

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            N +I  F  + +  EA  V+  M E+G  PD  TY T++    +  K  +         
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEA-------- 440

Query: 654 IYKMLSYSGEK 664
            YKM+   G K
Sbjct: 441 -YKMMDEMGRK 450


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 200/435 (45%), Gaps = 16/435 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            R  +LE+    +  M   G   D I  + +I+   R  K   +   K+ + +E      
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKA--AKILEVLEGSGAVP 170

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ KAG+ + A+  L     + +SP   TY  ++ +L +SG+  +A  V 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + + +    P    Y  L++   +   +  A  ++ EM   G  PD  TY++L++     
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L +M  S  +PN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G +P+++++N L+    K  + DRA E  E M  
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN M+  L +  + ED   +L  + ++G  P ++TY T++D   ++G+   
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           AI+ L+            MR   LKP  +  +SL+     + +  EA       +  G++
Sbjct: 468 AIKLLDE-----------MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVR 516

Query: 624 PDVVTYTTLMKALIR 638
           P+ VT+ ++M  L +
Sbjct: 517 PNAVTFNSIMLGLCK 531



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 207/448 (46%), Gaps = 22/448 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-- 248
           + P T   LI    R     KA  ++  +   G   D I Y+++I    +  +I+++L  
Sbjct: 137 IIPCT--TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L ++        +  D    N ++     +G   +AM  L         P   TY  +I 
Sbjct: 195 LDRM-------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A        +A  + +E+++ G  P    YN L+ G  K G L +A   +++M  SG  P
Sbjct: 248 ATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  T+++++ +  + GRW  A  +L +M      P+   ++ ++     +G   R   +L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M   G +P++  YN ++  F K   +  A+   +RM+S G  PD +T+NT++    K 
Sbjct: 368 EKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+ + A E+  ++  +G  P   TYN +I+ L +  +     +LL  MRA+ L P+ +TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           ++LV    + G+ D+AI+            F      G++P+ +  NS++    + ++  
Sbjct: 488 SSLVGGLSREGKVDEAIK-----------FFHEFERMGVRPNAVTFNSIMLGLCKTRQTD 536

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            A   L YM   G KP   +YT L++ L
Sbjct: 537 RAIDFLVYMINRGCKPTETSYTILIEGL 564



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 17/332 (5%)

Query: 315 RTIEAEAVF---EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           RT E E  F   E +   G  P       L++G+ +MG  + A  ++  +E SG +PD  
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+++I  Y  AG   +A  VL  M VS   P+   Y+ IL    D G+ ++  +VL  M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                 PD   Y ++I+   + + +  AM   D M   G  PD +T+N L++   K GR 
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A +   +M   G  P   T+NI++  +    RW D ++LL +M  +G  P+VVT+  L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++             C +GL  +A++    M   G +P++L+ N L++ F ++++   A 
Sbjct: 351 INFL-----------CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             L+ M   G  PD+VTY T++ AL +  K  
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 185/409 (45%), Gaps = 32/409 (7%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N+ +    + G+  +  +FL      G  P       +I      G+T +A  + E L+ 
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG  P    YN ++ GY K G + +A   +S ++R  V PD  TY+ ++ +  ++G+ + 
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 389 ARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           A  VL  M      P+   Y+ ++ A  RD G  Q   ++L EM+  G  PD   YNV++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ-AMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +   K   L  A+   + M S G +P+ IT N ++      GR+  AE+L  +M  +G+ 
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P   T+NI+IN L  +        +L  M   G  PN ++Y  L+  + +  + D AIE 
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C +G  + AV     + + G  P  +  N++I+   +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSY 649
             +  +A  +L  M+   LKPD +TY++L+  L R   VD+  K F  +
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 197/415 (47%), Gaps = 4/415 (0%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + Y+++I    ++ ++  A  +  R  ++P  +TYN ++ +   +  L++A+ ++ +M Q
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
              + D I Y+++I++  R + +  ++  KL  E+       D    N ++ G  K G  
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGQAM--KLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A++FL      G  P   T+  ++ ++ ++GR ++AE +  ++   G  P    +N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    + G L  A  ++ +M + G  P+  +Y+ L+  +    + + A   L+ M     
Sbjct: 351 INFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +L      G+ +   ++L ++ S G  P    YN +ID   K      A+ 
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D M ++ ++PDTIT+++L+    + G+ D A + F E +  G  P   T+N ++  L 
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  + +     L  M  +G  P   +YT L++     G   +A+E L  L ++ +
Sbjct: 531 KTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 44/419 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++++L++LC S         +   LQ+   CY   + Y+ILI A  R   + +A  L   
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITYTILIEATCRDSGVGQAMKLLDE 264

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R    TP  +TYN L++   +   L++A+  ++ M   G   + I ++++++S+  T +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                    + + E        +LL D++                      G SP   T+
Sbjct: 325 ---------WMDAE--------KLLADMLRK--------------------GFSPSVVTF 347

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G    A  + E++ + G +P + +YN LL G+ K   +  A   +  M  
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD  TY+ ++ A    G+ E A  +L ++      P    Y+ ++ G    G+  +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L EM++  ++PDT  Y+ ++    +   +  A+  F      G+ P+ +T+N+++ 
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIML 527

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K  + DRA +    M  RG  P  T+Y I+I  L  +   ++   LL  +  +GL+
Sbjct: 528 GLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 230/493 (46%), Gaps = 19/493 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + +  +A+ L +R R     P  +++N++++   +   +++AL+L   M+
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 381

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    +   Y+++I  L    +++ +   ++  E+E   +  +   +N ++    KA  
Sbjct: 382 KDA-EPNSSTYNIIIDMLCLGGRVEEAY--RILDEMEHASLFPNLLTVNIMVDRLCKARK 438

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +    A   G +P   TY ++I  L   G+  EA  +FE++ ++G       Y +
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ +   G  +D   +  E+ R G  PD    +  +D    AG  E  R++ +++    
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS ++ G    G+ + T  +   MK  G   D   YN ++D F K   +H A 
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M  + ++P   T+  ++D   K  R D A  LFEE + +G       Y+ +I+  
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  R ++   +L  M  +GL PNV T+ +L+D   ++   ++A+ C           F+
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC-----------FQ 727

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M+     P+    + LIN     Q+  +AF   Q M++ GL P+VVTYTT++  L +V 
Sbjct: 728 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 787

Query: 641 KFHKVFSSYLFFN 653
                +S +  F 
Sbjct: 788 NITDAYSLFERFK 800



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 238/524 (45%), Gaps = 24/524 (4%)

Query: 132 LLKNLC----SSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHA--LGRSEKLYEA 182
           +L N+C        ++D+A+     L+   L     SY  +  +L  A  LG +E+L+ A
Sbjct: 250 VLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF-A 308

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            + ++R       YN +I         E A  L+ ++R+ G     ++++ ++  L +  
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K+D +L   L++ ++ D  E +    N +I      G   +A R L   +   L P   T
Sbjct: 369 KVDEAL--SLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
              ++  L  + +  EA  +FE   + G  P    Y +L+ G  K G + +A  +  +M 
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 485

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G   +   Y+ LI  +   GR E    + KE+     KP+  + +  +      GE +
Sbjct: 486 DAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVE 545

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   + ++++S G  PD   Y+++I    K          F  M  +G   D   +N ++
Sbjct: 546 KGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 605

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+  +A E+ EEM+E+   P   TY  +++ L + +R ++   L    +++G+ 
Sbjct: 606 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 665

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            NVV Y++L+D +G+ GR D+A   LE            M   GL P+    NSL++A  
Sbjct: 666 LNVVLYSSLIDGFGKVGRIDEAYLILEE-----------MMKKGLTPNVYTWNSLLDALV 714

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +   EA    Q MKE    P+  TY+ L+  L RV K++K F
Sbjct: 715 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 211/476 (44%), Gaps = 18/476 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L   GR E+ Y      +   L P  LT N ++    +   LE+A  +     
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G + D + Y  +I  L +  ++D +   +L++++       +  +   +I  F   G 
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAY--RLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +        G  P        +  +  +G   +   +FE+++  G  P  ++Y+ 
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++   +   M++ G   D   Y+ ++D +  +G+   A  +L+EM+   
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P    Y  I+ G          + + +E KS G+E +   Y+ +ID FGK   +  A 
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+ +G+ P+  TWN+L+D   K    + A   F+ M+E    P T TY+I+IN L
Sbjct: 689 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +++        +M+ QGL+PNVVTYTT++    + G   D           A + F 
Sbjct: 749 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD-----------AYSLFE 797

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             + +G  P   + N+LI       R  EA+ V +  +  G + ++ +  +L+ AL
Sbjct: 798 RFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDAL 853



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 180/375 (48%), Gaps = 13/375 (3%)

Query: 271 VIVG-FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           V++G  A+A    +A+  L   Q VG       +  ++ AL+  G+  +A A+ +E+K S
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            L+P    YN  +  + K G +  A     E++  G+ PD+ +Y+ +I     AGR   A
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  +ME   + P ++ Y+ ++ GY   G ++  +++L+ ++  G  P    +N ++  
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            GK   +  A++ F+ M  +  EP++ T+N +ID     GR + A  + +EM+    FP 
Sbjct: 364 LGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             T NIM++ L +  + E+  ++  +   +G  P+ VTY +L+D  G+ G+ D+A    E
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 482

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            + D   NA  V+ T           SLI  F    R  +   + + +   G KPD+   
Sbjct: 483 KMLDAGHNANPVVYT-----------SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 531

Query: 630 TTLMKALIRVDKFHK 644
            T M  + +  +  K
Sbjct: 532 NTYMDCVFKAGEVEK 546



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 169/357 (47%), Gaps = 26/357 (7%)

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           E V EE+   G     +A   L    V+   L DA   V+ M R    P    Y++LI A
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            A A R E A  +L++M+    +    +++ ++      G+      ++ E+K S +EPD
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YNV ID FGK   +  A   F  + ++G++PD +++ ++I    K GR   AEELF 
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           +M+     PC   YN MI   G   R+ED  +LL  +R +G +P+VV++ +++   G+  
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368

Query: 560 RFDDAIE-----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           + D+A+                        CL G  ++A      M    L P+ L +N 
Sbjct: 369 KVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNI 428

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           +++   + ++  EA+ + +   + G  PD VTY +L+  L +   VD+ +++F   L
Sbjct: 429 MVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 485



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/557 (22%), Positives = 231/557 (41%), Gaps = 78/557 (14%)

Query: 161 SYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACA-------RNDDLEKAL 213
           +Y  +   L H L   EK+ E         +  L Y     ACA       R   L+ A+
Sbjct: 113 AYHAVLPFLHHDLAALEKVLE--------EMAVLGYGLPNQACAHLAAALVRARRLDDAV 164

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
             ++ MR+  +   F  Y+++I +L    + + +L  +L ++++    E+   L   ++ 
Sbjct: 165 LAVAVMRRLKFRPAFSAYTVLIGALAEARRPERAL--ELLRQMQEVGYEVGVHLFTTLVR 222

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
             A+ G  + A+  +   +G  L P    Y   I     +G    A   F ELK  GLKP
Sbjct: 223 ALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKP 282

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +Y +++    K G L +AE + ++ME    +P  + Y+ +I  Y +AGR+E A  +L
Sbjct: 283 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 342

Query: 394 K----------------------------------EMEVSHAKPNSFIYSRILAGYRDRG 419
           +                                  E+    A+PNS  Y+ I+      G
Sbjct: 343 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGG 402

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +  +++L EM+ + + P+    N+M+D   K   L  A   F+     G  PD +T+ 
Sbjct: 403 RVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYC 462

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LID   K G+ D A  LFE+M + G+      Y  +I       R ED  ++   +  +
Sbjct: 463 SLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 522

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQA 575
           G  P++    T +D   ++G  +      E                        G + + 
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            N F  M+  G      A N++++ F +  +  +A+ +L+ MKE  ++P V TY  ++  
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642

Query: 636 LIRVDKFHKVFSSYLFF 652
           L ++D+  +   +Y+ F
Sbjct: 643 LAKIDRLDE---AYMLF 656



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 214/487 (43%), Gaps = 50/487 (10%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P    ++++ ++      ++ AY ++  ++  +L +   L  +I++  L ++ KL EA
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL-FPNLLTVNIMVDRLCKARKLEEA 442

Query: 183 FLL--SQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           + +  S  QR   P  +TY +LI    +   +++A  L  KM   G++ + + Y+ +I++
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 502

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
                + +     K++KE+     + D  LLN  +    KAG+  K        +  G  
Sbjct: 503 FFIHGRKEDG--HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 560

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   +Y+ +I  L+ +G+  E   +F  +K+ G     +AYNA++ G+ K G +  A  +
Sbjct: 561 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 620

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + EM+   V P   TY  ++D  A   R + A ++ +E +    + N  +YS ++ G+  
Sbjct: 621 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 680

Query: 418 RGEWQRTFQVLKEMKSSGV-----------------------------------EPDTHF 442
            G     + +L+EM   G+                                    P+T+ 
Sbjct: 681 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 740

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+++I+   +    + A   +  M  +G+ P+ +T+ T+I    K G    A  LFE  +
Sbjct: 741 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 800

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   ++N +I  +    R  +  ++    R +G   N+ +  +L+D   +S    
Sbjct: 801 ANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKS---- 856

Query: 563 DAIECLE 569
              ECLE
Sbjct: 857 ---ECLE 860



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 7/299 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YSILIH L   G++ +    F   ++Q   L    YNA++    ++  + KA  ++ +M+
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +         Y  ++  L + +++D + +  L++E +   IEL+  L + +I GF K G 
Sbjct: 626 EKCVQPTVATYGAIVDGLAKIDRLDEAYM--LFEEAKSKGIELNVVLYSSLIDGFGKVGR 683

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L      GL+P   T+ +++ AL  +    EA   F+ +KE    P T  Y+ 
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 743

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  ++     A     +M++ G++P+  TY+ +I   A  G    A  + +  + + 
Sbjct: 744 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             P++  ++ ++ G  +       +QV +E +  G   +      ++D   K  CL  A
Sbjct: 804 GIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 125/276 (45%), Gaps = 11/276 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A+ A  +++++   C S   +  AY ++  + K          Y  ++  L + ++L EA
Sbjct: 595 ALDARAYNAVVDGFCKSGK-VHKAYEILEEM-KEKCVQPTVATYGAIVDGLAKIDRLDEA 652

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           ++L +  +     L  + Y++LI    +   +++A  ++ +M + G   +   ++ ++ +
Sbjct: 653 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 712

Query: 238 LTRTNKIDSSLLQ-KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           L +  +I+ +L+  +  KE++C        +L   I G  +    +KA  F    Q  GL
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSIL---INGLCRVQKYNKAFVFWQDMQKQGL 769

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   TY  +I+ L+  G   +A ++FE  K +G  P   ++NAL++G        +A  
Sbjct: 770 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 829

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           V  E    G   +  +   L+DA   +   E A IV
Sbjct: 830 VFEETRLRGCRINIKSCISLLDALNKSECLEQAAIV 865


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 248/534 (46%), Gaps = 57/534 (10%)

Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISA 202
           LA AV+S L         +LL  ++         L++  +L+  +  T  T  ++ L+  
Sbjct: 107 LAIAVISKLSSPKPVT--QLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRC 164

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           C +   +++A+     M++ G++      + ++  L+R N+I+++ +   Y ++   +I+
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV--FYADMYRMEIK 222

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE---- 318
            +    N +I    K G   KA  FLG+ +  G+ P   TY  ++   S  GR IE    
Sbjct: 223 SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-IEGARL 281

Query: 319 -----------------------------AEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                                        A  V  E+KE GL P + +YN L++G    G
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            L+ A     EM + G++P  +TY+ LI       + E+A I+++E+       +S  Y+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ GY   G+ ++ F +  EM + G++P    Y  +I    + N    A   F++++ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++PD +  NTL+D H   G  DRA  L +EM      P   TYN ++  L  + ++E+ 
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDG 586
           + L+G M+ +G+ P+ ++Y TL+  Y + G                 +AF V   M + G
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKG--------------DTKHAFMVRDEMLSLG 567

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
             P+ L  N+L+    ++Q    A  +L+ MK  G+ P+  ++ ++++A+  +D
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 15/387 (3%)

Query: 259 DKIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           D++E    +L D++V    +     +A+    + +  G  PKT T   ++T LS   R  
Sbjct: 148 DRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIE 207

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A   + ++    +K     +N ++    K G LK A+  +  ME  G+ P   TY+ L+
Sbjct: 208 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             ++  GR E AR+++ EM+    +P+   Y+ IL+   + G   R  +VL+EMK  G+ 
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLV 324

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD+  YN++I        L  A A  D M+ +G+ P   T+NTLI   F   + + AE L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             E++E+G    + TYNI+IN   +    +    L   M   G+ P   TYT+L+ +  +
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             +  +A E  E +  +           G+KP  + +N+L++          AF++L+ M
Sbjct: 445 KNKTREADELFEKVVGK-----------GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
               + PD VTY  LM+ L    KF +
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEE 520



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 16/331 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA   F  +KE G  P+T+  N +L    ++  +++A    ++M R  +  + +T++++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ + A+  L  MEV   KP    Y+ ++ G+  RG  +    ++ EMKS G +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEE 496
           PD   YN ++     + C     +   R + E G+ PD++++N LI      G  + A  
Sbjct: 293 PDMQTYNPILS----WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             +EM ++G  P   TYN +I+ L  + + E  + L+  +R +G++ + VTY  L++ Y 
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           Q G    A      L D+       M TDG++P+     SLI       +  EA  + + 
Sbjct: 409 QHGDAKKAF----ALHDE-------MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +   G+KPD+V   TLM     +    + FS
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 8/286 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +++L   CS+N  +++A+A    + K  +  ++   Y+ LIH L    K+  A 
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF-YTYNTLIHGLFMENKIEAAE 382

Query: 184 LLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           +L +  R     L  +TYN LI+   ++ D +KA  L  +M  DG       Y+ +I  L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            R NK   +   +L++++    ++ D  ++N ++ G    G+  +A   L     + ++P
Sbjct: 443 CRKNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  ++  L   G+  EA  +  E+K  G+KP   +YN L+ GY K G  K A  V 
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
            EM   G  P   TY+ L+   +     E A  +L+EM+     PN
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TY  VI+     GR  EA  VF+E+ 
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G +KP    YNAL+ GY   G L  A      M   GV     TY+LL+ A    GR 
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 642

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM      P+ F Y+ ++ G+   G  ++  ++ + M   GV      Y  +
Sbjct: 643 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 702

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +      FD  +  GI PD + +N LI+ H   G  DRA E+  EM+++  
Sbjct: 703 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 762

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ ++L+  M  +G+ P++VTY TL+  Y   G   DA+ 
Sbjct: 763 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 822

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + ++ +N        G  P+ L  N+LI    ++ +  +A  +++ M ENG+ PD 
Sbjct: 823 ----IRNEMMNK-------GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 872 STYISLIEGLTTEDE 886



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 5/391 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ-DG 223
           ++I++  L  + K   A  LL Q  R   +TYN +I+       ++ AL++M +MR+  G
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 550

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDAS 282
              +   Y  VI    +  ++D ++  K++ E +   +++ +  + N +I G+   G   
Sbjct: 551 IAPNQYTYGTVISGWCKVGRVDEAV--KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 608

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ +       G++   ATY  ++ AL   GR  EA  + EE+   GL P    YN L+
Sbjct: 609 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 668

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ K G +K A  +   M R GV     TY+ LI A +  G+ +    +  E      +
Sbjct: 669 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 728

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +Y+ ++  +   G   R F+++ EM+   + PD   YN ++        +  A   
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M   GI+PD +T+NTLI  +   G    A  +  EM  +G+ P   TYN +I  L +
Sbjct: 789 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             + +D + ++  M   G+ P+  TY +L++
Sbjct: 849 NGQGDDAENMVKEMVENGITPDDSTYISLIE 879



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL   GR  + YE       + L P   TYN LI+   +  +++KAL +   M 
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y+ +I +L++  ++  +   KL+ E     I  D  L N +I   + +G+
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQET--DKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + +E+ E G++P    YN 
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  + +EM   G  P   TY+ LI      G+ + A  ++KEM  + 
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 867 ITPDDSTYISLIEG 880



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M       CTTT+NIM+  L    +      LL  M      PN VTY T++  + 
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 530

Query: 557 QSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
             GR   A++                         C  G  D+AV  F  M T G +KP 
Sbjct: 531 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N+LI  + +  +   A      M E G+   V TY  L+ AL
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 25/409 (6%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           +++ ++  F K G   +A  F+   + +G+ P   TY ++I    + G    A+ V + +
Sbjct: 228 MVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM 287

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGR 385
            E G+      Y  L+KGY K   + +AE V+  M E + ++PDE  Y +LID Y   G+
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +L EM     K N FI + ++ GY  RGE      V+  M    ++PD++ YN 
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D + +      A    D+ML EGIEP  +T+NTL+    + G +D A +++  M + G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P    Y+ +++ L + E +E    L  ++ A+G   + +T+ T++    + G+  +A 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 566 ECLEGLSDQAVN---------------------AFRV---MRTDGLKPSNLALNSLINAF 601
           E  + + D   +                     AF+V   M  + + PS    NSLI+  
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            + +R  E   +L  M   GL P++VTY  L+    +     K FSSY 
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 224/492 (45%), Gaps = 24/492 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
            + SI+++A  +  K+ EA    ++     + P  +TY++LI+      D+E A  ++  
Sbjct: 227 FMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKF 286

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           M + G   + + Y+L+I+   +  K+D +  +L+ + +E     +  D +    +I G+ 
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAA---LVPDERAYGVLIDGYC 343

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G    A+R L     +GL        ++I      G   EAE V   + +  LKP + 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +YN LL GY + G+  +A  +  +M + G+ P   TY+ L+      G ++ A  +   M
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 463

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   YS +L G      ++    + K++ + G       +N MI    K   +
Sbjct: 464 MKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 523

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   FD+M   G  PD IT+ TLID + K     +A ++   M+     P    YN +
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSL 583

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ L +  R  +   LL  M  +GL PN+VTY  L+D +           C EG+ D+A 
Sbjct: 584 ISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGW-----------CKEGMLDKAF 632

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +++  M  +GL  + +  +++++      R  EA  ++Q M ++G  PD   +   +K+ 
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSD 689

Query: 637 IRVDKFHKVFSS 648
           IR     K+  S
Sbjct: 690 IRYAAIQKIADS 701



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 226/558 (40%), Gaps = 58/558 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAF- 183
           + +SL+   C     I  A  V++ +   NL    YSY    + L+    R     EAF 
Sbjct: 369 ICNSLINGYCK-RGEIHEAEGVITRMVDWNLKPDSYSY----NTLLDGYCREGHTSEAFN 423

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               +L +    T LTYN L+    R    + AL +   M + G   D + YS ++  L 
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +    + +    L+K+I            N +I G  K G   +A       + +G SP 
Sbjct: 484 KMENFEGA--STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I     +    +A  V   ++   + P  + YN+L+ G  K   L +   +++
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLT 601

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G+ P+  TY  LID +   G  + A     EM  +    N  I S +++G    G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 420 EWQRTFQVLKEMKSSGVEPDTH--------------------------------FYNVMI 447
                  ++++M   G  PD                                   YN+ I
Sbjct: 662 RIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 721

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   +  A   F  +  +G  PD  T+ TLI  +   G  D A  L +EM  RG  
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYN +IN L + E  +  +RL   +  +GL PNVVTY TL+D Y + G  D A + 
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK- 840

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
              L D+       M  +G+ PS +  ++LIN   +      +  +L  M + G+   ++
Sbjct: 841 ---LKDK-------MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 628 TYTTLMKALIRVDKFHKV 645
            Y TL++   +   ++++
Sbjct: 891 EYCTLVQGGFKTSNYNEM 908



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 231/554 (41%), Gaps = 55/554 (9%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           L+K  C     +D A  V+  +Q+       E  Y +LI    R+ K+ +A  LL +  R
Sbjct: 302 LIKGYCKQ-CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLR 360

Query: 191 LTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           L   T     N+LI+   +  ++ +A  ++++M       D  +Y+ ++    R      
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420

Query: 247 S--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +  L  K+ +E     IE      N ++ G  + G    A++   +    G++P    Y+
Sbjct: 421 AFNLCDKMLQE----GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYS 476

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++  L        A  +++++   G       +N ++ G  KMG + +AE +  +M+  
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD  TY  LID Y  A     A  V   ME     P+  +Y+ +++G          
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEX 596

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +L EM   G+ P+   Y  +ID + K   L  A +++  M   G+  + I  +T++  
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 485 HFKCGRYDRAEELFEEMQERGYFP-------------------------CTT-------T 512
            ++ GR D A  L ++M + G+FP                         C T        
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIV 716

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YNI I  L +  + +D +R    +  +G +P+  TY TL+  Y  +G  D+A      L 
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR----LR 772

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D+       M   GL P+ +  N+LIN   + +    A  +   + + GL P+VVTY TL
Sbjct: 773 DE-------MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTL 825

Query: 633 MKALIRVDKFHKVF 646
           +    ++      F
Sbjct: 826 IDGYCKIGNMDAAF 839



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 161/357 (45%), Gaps = 14/357 (3%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            +G+ +    SP    +  ++      G T  A  VF+ + + G  P  ++ N+LL   V
Sbjct: 145 LVGVYREFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLV 202

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G    A +V  +M R G++PD    S++++A+   G+ + A   +K+ME    +PN  
Sbjct: 203 KNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIV 262

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y  ++ GY   G+ +    VLK M   GV  +   Y ++I  + K   +  A      M
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 322

Query: 467 LSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
             E  + PD   +  LID + + G+ D A  L +EM   G        N +IN   ++  
Sbjct: 323 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
             + + ++  M    L P+  +Y TL+D Y           C EG + +A N    M  +
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGY-----------CREGHTSEAFNLCDKMLQE 431

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           G++P+ L  N+L+          +A  +   M + G+ PD V Y+TL+  L +++ F
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENF 488


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TY  VI+     GR  EA  VF+E+ 
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G +KP    YNAL+ GY   G L  A      M   GV     TY+LL+ A    GR 
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 268

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM      P+ F Y+ ++ G+   G  ++  ++ + M   GV      Y  +
Sbjct: 269 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 328

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +      FD  +  GI PD + +N LI+ H   G  DRA E+  EM+++  
Sbjct: 329 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 388

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ ++L+  M  +G+ P++VTY TL+  Y   G   DA+ 
Sbjct: 389 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 448

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + ++ +N        G  P+ L  N+LI    ++ +  +A  +++ M ENG+ PD 
Sbjct: 449 ----IRNEMMN-------KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 497

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 498 STYISLIEGLTTEDE 512



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 5/391 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ-DG 223
           ++I++  L  + K   A  LL Q  R   +TYN +I+       ++ AL++M +MR+  G
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 176

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDAS 282
              +   Y  VI    +  ++D ++  K++ E +   +++ +  + N +I G+   G   
Sbjct: 177 IAPNQYTYGTVISGWCKVGRVDEAV--KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 234

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ +       G++   ATY  ++ AL   GR  EA  + EE+   GL P    YN L+
Sbjct: 235 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ K G +K A  +   M R GV     TY+ LI A +  G+ +    +  E      +
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 354

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +Y+ ++  +   G   R F+++ EM+   + PD   YN ++        +  A   
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M   GI+PD +T+NTLI  +   G    A  +  EM  +G+ P   TYN +I  L +
Sbjct: 415 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             + +D + ++  M   G+ P+  TY +L++
Sbjct: 475 NGQGDDAENMVKEMVENGITPDDSTYISLIE 505



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL   GR  + YE       + L P   TYN LI+   +  +++KAL +   M 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y+ +I +L++  ++  +   KL+ E     I  D  L N +I   + +G+
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQET--DKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + +E+ E G++P    YN 
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  + +EM   G  P   TY+ LI      G+ + A  ++KEM  + 
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 493 ITPDDSTYISLIEG 506



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M       CTTT+NIM+  L    +      LL  M      PN VTY T++  + 
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 156

Query: 557 QSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
             GR   A++                         C  G  D+AV  F  M T G +KP 
Sbjct: 157 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N+LI  + +  +   A      M E G+   V TY  L+ AL
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 239/516 (46%), Gaps = 66/516 (12%)

Query: 189 QRLTP--LTYNALI-SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +R+ P   TYN ++ S CAR D +++A++L S +R+ G   D + YS ++  L + +++D
Sbjct: 152 RRIAPNLQTYNIILRSLCARGD-VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLD 210

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYA 304
           ++L   L  E+    ++ D    N ++ G  + G   KAM+    + +  G SP  ATY 
Sbjct: 211 NAL--DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYK 268

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++  L   GR  EA  V+  +  +  +  T  Y  L+ G  + G +  A  V S+M ++
Sbjct: 269 VMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKA 328

Query: 365 GVLPDEHTYSLLIDAYANAGR-------WES---------------------------AR 390
           G++ D   Y+ LI  +   GR       W+S                           A 
Sbjct: 329 GLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEAT 388

Query: 391 IVLKEMEV-SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +LK++E  +   P+   +  ++ G  + G   R F++L++ ++SG E D   Y+ MI+ 
Sbjct: 389 ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINR 448

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F K    H A   +  M+ +G +P++  +N LI+   +  + + A +++ EM   G  P 
Sbjct: 449 FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TYN +I+ L + E++++   L   M  +G  P++ TY +L+    +  + D A+    
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C  G  D+A   +  M+     P+ +  N+L++ F E  
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIG 628

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
              +A ++   + +NGLKPD+VTY T +K L   ++
Sbjct: 629 SIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNR 664



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 245/552 (44%), Gaps = 58/552 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ +L++LC+    +D A ++ S L++  +     + YS L+  L + ++L  A  L   
Sbjct: 161 YNIILRSLCA-RGDVDRAVSLFSSLRRRGVAPD-RVTYSTLMSGLAKHDQLDNALDLLDE 218

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTN 242
                 +   + YNAL+S C R    EKA+ +  ++ +D G   +   Y +++  L +  
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +   +   +++  +  +  + D      +I G  ++GD   A R        GL    + 
Sbjct: 279 RFKEA--GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV 336

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y ++I      GRT EA   ++    SG++  T  YN + KG +  G + +A  ++ ++E
Sbjct: 337 YNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLKQLE 395

Query: 363 R-SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +   PD+ T+  LI      G    A  +L++   S  + + F YS ++  +   G  
Sbjct: 396 NDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRT 455

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +V K M   G +P++H YN +I+ F + + ++ A+  +  M S G  P  IT+NTL
Sbjct: 456 HDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTL 515

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-------WED------ 528
           ID   K  +Y  A  L +EM ERG+ P   TY  +I  L   ++       W++      
Sbjct: 516 IDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGL 575

Query: 529 -VKRLLGNMRAQGLL---------------------PNVVTYTTLVDIYGQSGRFDDAIE 566
            V  ++ N+   GL                      PN+VTY TL+D + + G  D A  
Sbjct: 576 QVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAAS 635

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + D           +GLKP  +  N+ I       R  E   +L  +   G+ P V
Sbjct: 636 LWTAILD-----------NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTV 684

Query: 627 VTYTTLMKALIR 638
           +T++ L++A+I+
Sbjct: 685 ITWSILVRAVIK 696



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 14/390 (3%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           +I  + Q  N ++      GD  +A+      +  G++P   TY+ +++ L+   +   A
Sbjct: 153 RIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNA 212

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLID 378
             + +E+   G++     YNALL G  + G  + A  V  ++ R  G  P+  TY +++D
Sbjct: 213 LDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLD 272

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                GR++ A  V   M  ++ + ++  Y  ++ G    G+     +V  +M  +G+  
Sbjct: 273 GLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVL 332

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   YN +I  F +      A   +D     GI   T T+N +       G    A EL 
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELL 391

Query: 499 EEMQ-ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++++ +    P   T+  +I+ L E         +L + R  G   +V +Y+++++ + +
Sbjct: 392 KQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCK 451

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            GR  DA E            ++ M  DG KP++   N+LIN F    +  +A  +   M
Sbjct: 452 DGRTHDANE-----------VYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             NG  P ++TY TL+  L + +K+ +  S
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASS 530



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 8/330 (2%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+I+   L  S  + EA  LL Q +     +P  +T+  LI     N    +A  ++   
Sbjct: 371 YNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDA 430

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D  +YS +I    +  +   +   ++YK +  D  + +  + N +I GF +  
Sbjct: 431 RNSGEELDVFSYSSMINRFCKDGRTHDA--NEVYKNMVKDGCKPNSHVYNALINGFCRVS 488

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + A++        G  P   TY  +I  L  + +  EA ++ +E+ E G KP  + Y 
Sbjct: 489 KINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYA 548

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L++G  +   +  A  +  E+  +G+  D   +++LI    +AG+ + A  +  EM+  
Sbjct: 549 SLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK 608

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           +  PN   Y+ ++ G+ + G   +   +   +  +G++PD   YN  I      N     
Sbjct: 609 NCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEG 668

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +   + +L+ GI P  ITW+ L+    K G
Sbjct: 669 VLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 21/280 (7%)

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK------PNSFIYSRILAGYRDR 418
           G  P   +++ L+DA+  A R+  A      +  SH        PN   Y+ IL     R
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASL--SHGAFGRRIAPNLQTYNIILRSLCAR 171

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  R   +   ++  GV PD   Y+ ++    K++ L +A+   D M + G++ D + +
Sbjct: 172 GDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCY 231

Query: 479 NTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           N L+   F+ G +++A +++E++ ++ G  P   TY +M++ L +  R+++   +   M 
Sbjct: 232 NALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMM 291

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           A     + VTY  L  I+G          C  G  D A   +  M   GL       NSL
Sbjct: 292 ANNHQADTVTYGIL--IHGL---------CRSGDVDSAARVYSDMVKAGLVLDVSVYNSL 340

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           I  F E  R  EA+        +G++  + TY  + K L+
Sbjct: 341 IKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLL 379


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 234/543 (43%), Gaps = 59/543 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++ +++++LC      + A  ++ W++  N C    ++Y++LIH L +S +++EA  +  
Sbjct: 133 IYSAVVRSLCEL-KDFNKAKEMIHWME-FNQCKLSIVVYNVLIHGLCKSRRIWEALEIKN 190

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
                 L  N +      N+    A  L  +M + G   + I YS++I S  R  ++D++
Sbjct: 191 CLMQKGLEANVVTYYGKFNE----AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNA 246

Query: 248 L--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS----------------------- 282
           +  L K+ K      IE      N +I G+ K G+AS                       
Sbjct: 247 IGFLDKMTKA----SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTS 302

Query: 283 ------------KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
                       KA +        G+SP T T+ A+I+ L  +    EA  +F E+KE  
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    YN +++G+ + G + +A  ++ EM   G +PD +TY  LI    + GR   A+
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
             + ++   H K N+  YS ++ GY   G ++      + M   GV  D   Y ++ID  
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            + +           M + G+ PD + +  +ID H K G    A  L++ M + G  P  
Sbjct: 483 AREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNV 542

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY  +IN L +    +  + L        + PN +TY   +D   + G  + A++    
Sbjct: 543 VTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHA 602

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           +              G   + ++ N LI  F    +  EA  +L  M +N + PD +TY+
Sbjct: 603 M------------LKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYS 650

Query: 631 TLM 633
           T++
Sbjct: 651 TII 653



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 196/439 (44%), Gaps = 22/439 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T +AL++   R       L L   +       D   YS V++SL      + +  +++  
Sbjct: 98  TLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKA--KEMIH 155

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E ++ +L   + N +I G  K+    +A+         GL     TY          G
Sbjct: 156 WMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY---------G 206

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EAE +F+E+ E GL      Y+ L+  + + G + +A   + +M ++ +    + Y+
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+ Y   G   +A+    EM      P    Y+ +++GY + GEW + F+V  EM + 
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P+T+ +  +I    + N +  A+  F  M    I P  +T+N +I+ H + G    A
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM  +G+ P T TY  +I+ L    R  + K  + ++       N + Y+ LV  
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y + GRF D           AV+A RVM   G+    +    LI+    +      F +L
Sbjct: 447 YCKEGRFKD-----------AVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLL 495

Query: 615 QYMKENGLKPDVVTYTTLM 633
           + M  +GL+PD V YT ++
Sbjct: 496 KEMHNHGLRPDAVIYTNMI 514



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 37/342 (10%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +K+  L P  +  +ALL G ++     D   +  ++  + V PD + YS ++ +      
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEW----------QRTFQ-------- 426
           +  A+ ++  ME +  K +  +Y+ ++ G  + R  W          Q+  +        
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 427 -------VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                  + KEM   G+  +   Y+++ID+F +   + +A+   D+M    IE     +N
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LI+ + K G    A+  F+EM ++G  P   TY  +I+    +  W    ++   M A+
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+ PN  T+T ++     SG       C   +  +A+  F  M+   + PS +  N +I 
Sbjct: 327 GISPNTYTFTAII-----SGL------CRANMMAEAIRLFGEMKERKIMPSEVTYNVMIE 375

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                   +EAF +L  M   G  PD  TY  L+  L  V +
Sbjct: 376 GHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGR 417



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 167/385 (43%), Gaps = 53/385 (13%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ +I  L R+  + EA  L    + +++ P  +TYN +I    R+ ++ +A +L+ +M 
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG- 279
             G+  D   Y  +I  L    ++  +  ++   ++  D  +L+    + ++ G+ K G 
Sbjct: 395 GKGFVPDTYTYRPLISGLCSVGRVSEA--KEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452

Query: 280 --DASKAMRFL---GMAQGV-----------------------------GLSPKTATYAA 305
             DA  A R +   G+A  +                             GL P    Y  
Sbjct: 453 FKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTN 512

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I   S +G   EA  +++ + + G  P    Y AL+ G  K G +  AE +  E   S 
Sbjct: 513 MIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSD 572

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-----YSRILAGYRDRGE 420
           V P+  TY   +D     G  E A      +++ HA    F+     Y+ ++ G+   G+
Sbjct: 573 VTPNHITYGCFLDHLTRGGNMEKA------VQLHHAMLKGFLATTVSYNILIRGFCRLGK 626

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +   ++L  M  + + PD   Y+ +I    K + L  A+  +  ML +G++PDT+ ++ 
Sbjct: 627 IEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSF 686

Query: 481 LIDCHFKCGRYDRAEELFEEMQERG 505
           L+      G  ++A EL +EM  RG
Sbjct: 687 LVHGCCIAGELEKAFELRDEMIRRG 711



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 39/316 (12%)

Query: 160 YSYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           Y+Y  L S L  ++GR  +  E    L     +L  + Y+AL+    +    + A++   
Sbjct: 403 YTYRPLISGLC-SVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACR 461

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   D + Y+++I    R +  D+  L  L KE+    +  D  +  ++I   +K
Sbjct: 462 VMVERGVAMDLVCYAILIDGTAREH--DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSK 519

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR--- 334
           AG+  +A     +    G  P   TY A+I  L  +G   +AE + +E   S + P    
Sbjct: 520 AGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHIT 579

Query: 335 -------------------------------TKAYNALLKGYVKMGYLKDAEFVVSEMER 363
                                          T +YN L++G+ ++G +++A  ++  M  
Sbjct: 580 YGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTD 639

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           + +LPD  TYS +I         + A  +   M     KP++  YS ++ G    GE ++
Sbjct: 640 NDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEK 699

Query: 424 TFQVLKEMKSSGVEPD 439
            F++  EM   G+  +
Sbjct: 700 AFELRDEMIRRGMRSN 715



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 15/234 (6%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           MK   + P+    + +++   ++   +  +  FD ++S  ++PD   ++ ++    +   
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY-- 548
           +++A+E+   M+          YN++I+ L +  R  +   +   +  +GL  NVVTY  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 549 -----TTLVDIYGQSGRFDDAIE--------CLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
                  L    G+ G   + I         C  G  D A+     M    ++ +    N
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           SLIN + +    + A      M + GL P VVTYT+L+       ++HK F  Y
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 228/521 (43%), Gaps = 52/521 (9%)

Query: 160 YSYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTPLTYNALISACA-RNDDLEKALNLM 216
           + +++ + +L+ A  L  + K ++  LL+    L+  + N  ++  + + D L   L + 
Sbjct: 40  HVFDVFFQVLVEAGLLNEARKFFDK-LLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVF 98

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           S+  Q G   +  +Y++++ SL R  KI  +    L   +E      D      +I G+ 
Sbjct: 99  SEFPQLGVCWNTESYNILMNSLFRLGKIREA--HHLLMRMEFKGCIPDVVSYTTIIDGYC 156

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
             G+  K ++ +   Q  GL P   TY+++I  L  SG+ +E E V  E+ + G+ P   
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEME---------------------------------- 362
            Y  L+ G+ K+G  + A  + SEME                                  
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276

Query: 363 -RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G  PDE TY+ LID Y   G  + A  +  +M      PN   Y+ +  G    GE 
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++L EM   G++ +   YN +++   K   +  A+   + M   G+ PDTIT+ TL
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTL 396

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D ++K G   +A EL  EM +RG  P   T+N+++N L    + ED +RLL  M  +G+
Sbjct: 397 MDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGI 456

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +PN  TY +++  Y           C+      +   +R M   G+ P +   N LI   
Sbjct: 457 MPNAATYNSIMKQY-----------CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGH 505

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            + +   EA+ + + M E        +Y  L+K   +  K 
Sbjct: 506 CKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKL 546



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 182/375 (48%), Gaps = 20/375 (5%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKP 333
             +AG  ++A +F       G++    +    +T LS+    +     VF E  + G+  
Sbjct: 49  LVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCW 108

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T++YN L+    ++G +++A  ++  ME  G +PD  +Y+ +ID Y + G  +    ++
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           KEM++   KPN + YS I+      G+     +VL+EM   GV PD   Y  +ID F K 
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A   F  M +  I PD+I ++ LI      G+   A++LF EM ++G+ P   TY
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288

Query: 514 NIMIN---LLGEQERWEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +I+    LGE ++       L N   Q GL PNVVTYT L D   +SG  D A E L 
Sbjct: 289 TALIDGYCKLGEMKK----AFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            +  +           GL+ +    N+++N   +     +A  +++ MKE GL PD +TY
Sbjct: 345 EMCRK-----------GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393

Query: 630 TTLMKALIRVDKFHK 644
           TTLM A  +  +  K
Sbjct: 394 TTLMDAYYKTGEMVK 408



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 226/495 (45%), Gaps = 25/495 (5%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQK 155
           N+ES + L +S   L ++     E++  +    +   + ++ S  + ID  Y  V  LQK
Sbjct: 109 NTESYNILMNSLFRLGKIR----EAHHLLMRMEFKGCIPDVVSYTTIID-GYCHVGELQK 163

Query: 156 H-NLCYSYEL--------LYSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALIS 201
              L    +L         YS +I  L +S K+ E    L    +R + P  + Y  LI 
Sbjct: 164 VVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLID 223

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
              +  + + A  L S+M       D I +S +I  L+ + K+  +   KL+ E+     
Sbjct: 224 GFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEA--DKLFNEMIKKGF 281

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E D      +I G+ K G+  KA         +GL+P   TY A+   L  SG    A  
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +  E+   GL+     YN ++ G  K G +  A  ++ EM+ +G+ PD  TY+ L+DAY 
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    AR +L+EM     +P    ++ ++ G    G+ +   ++LK M   G+ P+  
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN ++  +   N +  +   +  M ++G+ PD+ T+N LI  H K      A  L +EM
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E+ +    ++YN +I    ++++  + ++L   MR +GL+ +   Y   VD+  + G  
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNM 581

Query: 562 DDAIECLEGLSDQAV 576
           +  +E    L D+A+
Sbjct: 582 ETTLE----LCDEAI 592



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 177/382 (46%), Gaps = 9/382 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
           ++ +L+   C   ++   AY + S ++   +     + +S LI  L  S K+ EA   F 
Sbjct: 217 IYTTLIDGFCKLGNT-QAAYKLFSEMEAREIVPD-SIAFSALICGLSGSGKVVEADKLFN 274

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              ++   P  +TY ALI    +  +++KA  L ++M Q G   + + Y+ +   L ++ 
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++D++   +L  E+    ++L+    N ++ G  KAG+  +A++ +   +  GL P T T
Sbjct: 335 ELDTA--NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTIT 392

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++ A   +G  ++A  +  E+ + GL+P    +N L+ G    G L+D E ++  M 
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G++P+  TY+ ++  Y        +  + + M      P+S  Y+ ++ G+      +
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             + + KEM           YN +I  F K   L  A   F+ M  EG+      +N  +
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572

Query: 483 DCHFKCGRYDRAEELFEEMQER 504
           D +++ G  +   EL +E  E+
Sbjct: 573 DMNYEEGNMETTLELCDEAIEK 594



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 16/281 (5%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           D H + +       AG    AR    ++    V+ +  +  +Y   L+  RD        
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDM--LGMVL 95

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           +V  E    GV  +T  YN+++++  +   +  A     RM  +G  PD +++ T+ID +
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
              G   +  +L +EMQ +G  P   TY+ +I LL +  +  + +++L  M  +G+ P+ 
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           V YTTL+D +           C  G +  A   F  M    + P ++A ++LI       
Sbjct: 216 VIYTTLIDGF-----------CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +  EA  +   M + G +PD VTYT L+    ++ +  K F
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF 305


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 231/492 (46%), Gaps = 24/492 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN----ALISACARN-DDLEKALNLMSKMR 220
           ++ L+  L +     + F L    RL  L+ +    ++++ C  N + + +AL  M+ + 
Sbjct: 94  FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  + + Y+ +I+ L   ++I  +   +L+  ++      +      +I G  + G+
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEA--TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGN 211

Query: 281 ASKAMRF----LGMAQ--GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
            + A++     L  A   GV   P   TY+ +I  L   GR  EA+ +FEE+K  G+ P 
Sbjct: 212 VNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPD 271

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
             +Y+ L+ G+   G    ++ +  EM   GV PD  T+S+LID     G+   A+ +L+
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M      PN   Y+ ++ G+   G+     ++   M S G+EPD   Y  +I+ + K  
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  AM  ++ ML  G  P+  T+ TL+   F+ G+   A++LF  M+  G    +  Y 
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I ++ L + +   +   L   +++     N+  Y+ L+D   ++G+ + A E  E LS +
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                      GL+P  +  N +I+ F +  +   A  + + M+ENG  PD++ Y TL+ 
Sbjct: 512 -----------GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLC 560

Query: 635 ALIRVDKFHKVF 646
                +K  +V 
Sbjct: 561 GFCEGNKLEEVI 572



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 217/459 (47%), Gaps = 16/459 (3%)

Query: 131 SLLKN-LCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLS 186
           S+L N LC+ N   +   A+   L++  +     + Y+ LI  L    ++ EA   FL  
Sbjct: 130 SILANCLCNVNRVSEALAAMAGILRRGYI--PNVVTYTTLIKGLCMEHRISEATRLFLRM 187

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQD----GYHCD--FINYSLVIQSL 238
           Q+   TP  +TY  LI    +  ++  AL L  +M  D    G +C    I YS++I  L
Sbjct: 188 QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGL 247

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  + D +  ++L++E++   +  D    + +I GF  AG   ++          G+ P
Sbjct: 248 CKVGREDEA--KELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP 305

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T++ +I  L   G+  EA+ + E + + G+ P    YN+L+ G+  +G L  A  + 
Sbjct: 306 DMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF 365

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M   G+ PDE +Y+ LI+ Y    + + A  +  EM      PN   Y  +L G   +
Sbjct: 366 LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQK 425

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+     ++   MK+ GV  ++  Y + +D   K +CL  AM  F+ + S   + +   +
Sbjct: 426 GKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENY 485

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + LID   K G+ + A ELFE++ + G  P   TYNIMI+   +  + ++   L   M  
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEE 545

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            G  P+++ Y TL+  + +  + ++ I+ L  +  + V+
Sbjct: 546 NGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 178/374 (47%), Gaps = 19/374 (5%)

Query: 276 AKAGD--ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            K G+  A +A  F  +       P  +++  ++  L+      +  +++ E++ +GL P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
                + L      +  + +A   ++ + R G +P+  TY+ LI       R   A  + 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------VEPDTHFYNVMI 447
             M+     PN+  Y  ++ G    G      ++ KEM +         +P    Y+++I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K      A   F+ M ++G+ PD I+++TLI      G++D+++ LF+EM ++G  
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   T++++I+ L ++ +  + K+LL  M  +G++PN++TY +L+D +           C
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF-----------C 353

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           + G  + A   F  M + GL+P  ++  +LIN + +  +  EA  +   M + G  P+V 
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413

Query: 628 TYTTLMKALIRVDK 641
           TY TL+K L +  K
Sbjct: 414 TYGTLLKGLFQKGK 427



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 195/421 (46%), Gaps = 13/421 (3%)

Query: 129 WHSLLKNLCSS---NSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHAL---GRSEKLYE 181
           + +L+K LC +   N ++ L   +++   ++ + C    + YSI+I  L   GR ++  E
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKE 258

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            F   + Q + P  ++Y+ LI         +++ +L  +M   G   D + +S++I +L 
Sbjct: 259 LFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K+  +  +KL + +    I  +    N +I GF   GD + A          GL P 
Sbjct: 319 KEGKVTEA--KKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPD 376

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             +Y  +I     + +  EA  ++ E+ + G  P    Y  LLKG  + G + DA+ +  
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M+  GV  +   Y + +D          A  +  E++  + K N   YS ++ G    G
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +  +++ +++   G++PD   YN+MI  F K   + +A   F++M   G  PD I +N
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556

Query: 480 TLIDCHFKCG-RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           TL+ C F  G + +   +L  +M ++   P   +  I++++L + E+++    LL     
Sbjct: 557 TLL-CGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPV 615

Query: 539 Q 539
           Q
Sbjct: 616 Q 616



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 16/225 (7%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+S  + P + F N ++    K N      + ++ M   G+ PD  T + L +C     R
Sbjct: 83  MRSHPIPPISSF-NRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A      +  RGY P   TY  +I  L  + R  +  RL   M+  G  PN VTY T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 551 LVDIYGQSGRFDDAI----ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           L+    Q+G  + A+    E L   S   VN          KP  +  + +I+   +  R
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNC---------KPGVITYSIIIDGLCKVGR 252

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLF 651
           + EA  + + MK  G+ PDV++Y+TL+       K+ +  S +LF
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQ--SKHLF 295


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 197/394 (50%), Gaps = 6/394 (1%)

Query: 173 LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
            G  E +Y+  +   R++++P  +T+N +I+   +   L KA +++  M+  G+  + + 
Sbjct: 211 FGGVEFVYKEMI---RRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVT 267

Query: 231 YSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           Y+ +I    +  ++        + KE+  +K+  +    N +I GF K  + S A++   
Sbjct: 268 YNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             Q  GL P   TY +++  L N G+  EA+ + +E+  S LKP    YNAL+ GY K  
Sbjct: 328 EMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKK 387

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            L++A  +   + + G+ P+  T++ L+  Y   G+ E A ++ K M      PN+  Y+
Sbjct: 388 LLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G+   G+ +    +L EM+  GV+ DT  YN++I  + +      A    D ML +
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G++P  +T+N L++ +   G    A  L ++M++ G +    TYN++I     + + ED 
Sbjct: 508 GLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDA 567

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
             LL  M  +GL+PN  TY  + +   + G   D
Sbjct: 568 NGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 175/350 (50%), Gaps = 14/350 (4%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD-- 353
           +SP   T+  VI  L   G+  +A  V +++K  G  P    YN L+ GY KMG +    
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 354 -AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A+ ++ EM  + V P+  T+++LID +       +A  V +EM+    KP    Y+ ++
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G  + G+      +L EM SS ++P+   YN +I+ + K   L  A   FD +  +G+ 
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+ IT+NTL+  + K G+ + A  L + M E+G+ P  +TYN +I     + + E+VK L
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M+ +G+  + VTY  L+  + +      A   ++ + D+           GLKPS+L
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK-----------GLKPSHL 514

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             N L+N +  +     A  + + M++ G   +VVTY  L++   R  K 
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 198/417 (47%), Gaps = 16/417 (3%)

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y    ++ + ++ +L + N+     ++ +YKE+   KI  +    N VI G  K G  +K
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGG--VEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRT---IEAEAVFEELKESGLKPRTKAYNA 340
           A   +   +  G  P   TY  +I      GR     +A+A+ +E+ E+ + P +  +N 
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNV 308

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+ K   L  A  V  EM+  G+ P   TY+ L++   N G+   A+++L EM  S+
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN   Y+ ++ GY  +   +   ++   +   G+ P+   +N ++  + K+  +  A 
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                ML +G  P+  T+N LI    + G+ +  + L  EMQ RG    T TYNI+I+  
Sbjct: 429 LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            E++  +   RL+  M  +GL P+ +TY  L++ Y           C+EG    A+N  +
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGY-----------CMEGNLRAALNLRK 537

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            M  +G   + +  N LI  +    +  +A  +L  M E GL P+  TY  + + ++
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMM 594



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 27/319 (8%)

Query: 339 NALLKGYVKMGYLKDAEFVVS--EMERSGVLPDEHTYSL-------LIDAYANAGRWESA 389
           N+++   + + Y+++++ V+     +R+G    ++ Y L       L+ A      +   
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAG----DYRYKLSVLSCNPLLSALVKENEFGGV 214

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V KEM      PN   ++ ++ G    G+  +   V+ +MK  G  P+   YN +ID 
Sbjct: 215 EFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274

Query: 450 F---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +   G+   ++ A A    M+   + P+++T+N LID   K      A ++FEEMQ +G 
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL 334

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++N L  + +  + K LL  M +  L PNV+TY  L++ Y +    ++A E
Sbjct: 335 KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARE 394

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             + +  Q           GL P+ +  N+L++ + +  +  EAF + + M E G  P+ 
Sbjct: 395 LFDNIGKQ-----------GLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNA 443

Query: 627 VTYTTLMKALIRVDKFHKV 645
            TY  L+    R  K  +V
Sbjct: 444 STYNCLIVGFCREGKMEEV 462



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 14/223 (6%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V KEM    + P+   +N +I+   K   L+ A    D M   G  P+ +T+NTLID + 
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276

Query: 487 KCGRYDR---AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           K GR  +   A+ + +EM E    P + T+N++I+   + E      ++   M++QGL P
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            VVTY +LV+     G+ ++A    + L D+       M +  LKP+ +  N+LIN + +
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEA----KVLLDE-------MLSSNLKPNVITYNALINGYCK 385

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            +   EA  +   + + GL P+V+T+ TL+    +  K  + F
Sbjct: 386 KKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF 428



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 29/288 (10%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++ L    KL EA      +LS   +   +TYNALI+   +   LE+A  L   + 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS-LLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + G   + I ++ ++    +  K++ + LLQK+  E        +    N +IVGF + G
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE---KGFLPNASTYNCLIVGFCREG 457

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +    L   Q  G+   T TY  +I+A        +A  + +E+ + GLKP    YN
Sbjct: 458 KMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYN 517

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL GY   G L+ A  +  +ME+ G   +  TY++LI  Y   G+ E A  +L EM   
Sbjct: 518 ILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK 577

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLK-EMKSSGVEPDT--HFYN 444
              PN                 + T++++K EM   G  PD   H Y+
Sbjct: 578 GLIPN-----------------RTTYEIIKEEMMEKGFLPDIEGHLYH 608



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 7/286 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           +++LI    + E L  A      + SQ  + T +TYN+L++       L +A  L+ +M 
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 + I Y+ +I    +   ++ +  ++L+  I    +  +    N ++ G+ K G 
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEA--RELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A     +    G  P  +TY  +I      G+  E + +  E++  G+K  T  YN 
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  + +    K A  ++ EM   G+ P   TY++L++ Y   G   +A  + K+ME   
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
              N   Y+ ++ GY  +G+ +    +L EM   G+ P+   Y ++
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 209/468 (44%), Gaps = 55/468 (11%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G  EK  EA   +   R  LT   YN+LI A  +    +KAL +   M Q G   D   +
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           ++++ +  +  ++DS  + KL++E+                                   
Sbjct: 128 NVLMNAFKKAKRVDS--VWKLFEEM----------------------------------- 150

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           Q    SP   TY+ +I A+   G   +A  VF ++K  G +P    Y +++ G  K G++
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A F+  EM   G++     Y+ LI     +GR ++A  + +EM     +P+   ++ +
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G    G      ++ +E +  G   D + YNV+IDT  K   L  A   F  +  +G+
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD  T+N L+D   K GR   A  L  +M+  G  P  T YN +I+ L +  R E+  +
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           LL  M++ G  P+VVTY TL+D   + GR +DA+   E +S +               + 
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF------------ANT 438

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENG----LKPDVVTYTTLMKA 635
           +  N+++N      R  EA+ +   MK+      + PD VTYTTL+  
Sbjct: 439 VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 175/360 (48%), Gaps = 11/360 (3%)

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G+A AG   K++  L   +G   +   + Y ++I A   +G T +A AV+  + +SGL+P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T  +N L+  + K   +     +  EM+     P+  TYS+LIDA    G  E A  V 
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M+    +PN F Y+ ++ G    G   + F + +EM S G+      YN +I   G+ 
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A   F  MLS+G++PD +T+ +L+      GR   A  +F+E ++ G       Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N++I+ L + +R ++   + G +   GL+P+V T+  L+D   +SGR  DA   L     
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD--- 359

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M+  G  P     N+LI+   +  R  EA  +L  M+  G +PDVVTY TL+
Sbjct: 360 --------MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 148/300 (49%), Gaps = 11/300 (3%)

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           AYN+L+  +VK GY + A  V   M +SG+ PD +T+++L++A+  A R +S   + +EM
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +  +  PN   YS ++      G  ++  +V  +MKS G  P+   Y  MID  GK   +
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   F+ M SEG+    + +N+LI    + GR D A +LF EM  +G  P   T+  +
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  LG   R  + +R+    R  G   +V  Y  L+D   +S R D+A E          
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWE---------- 320

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  +  DGL P     N+L++   +  R  +AF +L  MK  G  PDV  Y TL+  L
Sbjct: 321 -IFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 206/463 (44%), Gaps = 54/463 (11%)

Query: 79  KQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYR-AVPAPLWHSLLKNLC 137
           K RY   P + F+       SA  L  S  +L R+E      +R A+ A  ++SL+    
Sbjct: 47  KSRYILQPRI-FIELARGYASAGLLEKSVEALKRME-----GHRCALTASAYNSLIDAFV 100

Query: 138 SSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP- 193
            +  +   A AV   + +  L    Y++ +L +    A  R + +++ F   Q Q  +P 
Sbjct: 101 KAGYT-QKALAVYRVMGQSGLRPDTYTFNVLMNAFKKA-KRVDSVWKLFEEMQNQNCSPN 158

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +TY+ LI A  +   +EKAL +   M+  G   +   Y+ +I  L ++  +D +    L
Sbjct: 159 VITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFF--L 216

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           ++E+  + +     + N +I G  ++G A  A +        GL P   T+ +++  L  
Sbjct: 217 FEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGV 276

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR  EA  +F+E ++ G       YN L+    K   L +A  +  E+E  G++PD +T
Sbjct: 277 AGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYT 336

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ L+D    +GR   A I+L +M+ +   P+  +Y+ ++ G R  G  +   Q+L EM+
Sbjct: 337 FNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQ 396

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG---------------------- 470
           S G EPD   YN +ID   K   +  A+  F+ + ++G                      
Sbjct: 397 SLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDE 456

Query: 471 ----------------IEPDTITWNTLIDCHFKCGRYDRAEEL 497
                           I+PD +T+ TL++   + G  + A  L
Sbjct: 457 AYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 13/316 (4%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L+PR   +  L +GY   G L+ +   +  ME          Y+ LIDA+  AG  + A 
Sbjct: 52  LQPRI--FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            V + M  S  +P+++ ++ ++  ++        +++ +EM++    P+   Y+++ID  
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A+  F  M S G  P+  T+ ++ID   K G  D+A  LFEEM   G     
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             YN +I+ LG   R +   +L   M ++GL P+ VT+T+LV   G +GR          
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR---------- 279

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            + +A   F+  R  G        N LI+   + +R  EA+ +   ++E+GL PDV T+ 
Sbjct: 280 -ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFN 338

Query: 631 TLMKALIRVDKFHKVF 646
            LM  L +  + H  F
Sbjct: 339 ALMDGLCKSGRIHDAF 354



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 14/275 (5%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L   YA+AG  E +   LK ME       +  Y+ ++  +   G  Q+   V + M  SG
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PDT+ +NV+++ F K   +      F+ M ++   P+ IT++ LID   KCG  ++A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++F +M+ RG  P   TY  MI+ LG+    +    L   M ++GL+   V Y +L+   
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G+SGR           +D A   FR M + GL+P ++   SL+   G   R +EA  + Q
Sbjct: 240 GRSGR-----------ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ 288

Query: 616 YMKENGLKPDVVTYTTLMKALI---RVDKFHKVFS 647
             ++ G   DV  Y  L+  L    R+D+  ++F 
Sbjct: 289 EARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFG 323



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 135/275 (49%), Gaps = 12/275 (4%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +R GV P     + L++    A R+  A  VL E+E S       I+  +  GY   G  
Sbjct: 12  QRGGV-PSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLL 70

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +++ + LK M+          YN +ID F K      A+A +  M   G+ PDT T+N L
Sbjct: 71  EKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVL 130

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ++   K  R D   +LFEEMQ +   P   TY+I+I+ + +    E   ++  +M+++G 
Sbjct: 131 MNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGC 190

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN+ TYT+++D  G+SG  D           +A   F  M ++GL  + +  NSLI+  
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVD-----------KAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           G   R   A  + + M   GL+PD VT+T+L+  L
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%)

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G + +A+  +RVM   GL+P     N L+NAF + +R    + + + M+     P+V+TY
Sbjct: 103 GYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITY 162

Query: 630 TTLMKALIRVDKFHKVFSSYL 650
           + L+ A+ +     K    +L
Sbjct: 163 SILIDAVCKCGGVEKALKVFL 183



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 27/135 (20%)

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDA-------------------IECLEG-----LSDQ 574
           +G +P+V   TTLV++ G + RF++A                   IE   G     L ++
Sbjct: 13  RGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEK 72

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           +V A + M       +  A NSLI+AF +     +A AV + M ++GL+PD  T+  LM 
Sbjct: 73  SVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMN 132

Query: 635 AL---IRVDKFHKVF 646
           A     RVD   K+F
Sbjct: 133 AFKKAKRVDSVWKLF 147


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 256/574 (44%), Gaps = 64/574 (11%)

Query: 123 AVPAPLWHSL-LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA------LGR 175
            VP    +++ LK LC  N S      +    ++  +C    + Y+ +IH       +G+
Sbjct: 75  CVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGK 134

Query: 176 SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           +  LY   +   +Q   P  +T+N++I+A  +   ++ A  L+ +M  +G   + + Y+ 
Sbjct: 135 ACNLYHEMM---QQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTS 191

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I   +   + + +   K+++E+    +  D    N  +    K G + +A         
Sbjct: 192 MIHGYSTLGRWEEA--TKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P   TY  ++   +  G   +  + F  +K  G+      +  L+  Y K G + +
Sbjct: 250 KGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++SEM+  G+ PD  TYS LI A    GR   A     +M  +  +PN+ +Y  ++ 
Sbjct: 310 AMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQ 369

Query: 414 GYRDRGEWQRTFQVLKEMKSSGV-EPDTHFYNVMIDTF---GKYNCLHH----------- 458
           G+   G+  +  +++ EM ++G+  P+  F+N ++ +    G+    HH           
Sbjct: 370 GFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER 429

Query: 459 ---------------------AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                                A +  D M+S GI PDT T+NTL++ +FK GR D    L
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F EM ++   P T TYNI+++ L    R    +++L  M   G   ++ TY  ++     
Sbjct: 490 FREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGL-- 547

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C    +D+A+  F+ + T  +K +   LN++IN+    QR  EA  +   +
Sbjct: 548 ---------CRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598

Query: 618 KENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
            ++GL P+  TY  +++ L++   V++   +FSS
Sbjct: 599 SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSS 632



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 201/459 (43%), Gaps = 15/459 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--L 249
           T  TY  +++ C R    E  L    ++ + G   D    + V++ L  T + D ++  L
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +   E+ C        ++   +    ++  A   +R +   +GV  SP   TY  VI  
Sbjct: 67  LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGV-CSPDVVTYNTVIHG 125

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G+  +A  ++ E+ + G  P    +N+++    K   + +AE ++ +M  +GV P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           + TY+ +I  Y+  GRWE A  + +EM      P+   ++  +      G  +   ++  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M + G  P+   Y +++  +    C    M+ F+ M  +GI  + + +  LID + K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D A  +  EMQ +G  P   TY+ +I+ L    R  D       M   G+ PN V Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA-LNSLINAFGEDQRDA 608
           +L+  +           C  G   +A      M  +G+   N+A  NS++++  ++ R  
Sbjct: 366 SLIQGF-----------CTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +A  +   +K+ G + D++ + TL+     V +  K FS
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 169/361 (46%), Gaps = 21/361 (5%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EF 356
           P   TY  V+     + R     A F  L  +GLK    A N +LK         DA + 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRILAG 414
           ++  M   G +PD  +Y++++    +  R + A  +L+ M  E     P+   Y+ ++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +   G+  +   +  EM   G  PD   +N +I+   K   + +A     +M+  G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+ ++I  +   GR++ A ++F EM  RG  P   ++N  ++ L +  R ++   +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M A+G  PN+VTY  L+  Y   G F D +           + F  M+ DG+  + L  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMM-----------SFFNTMKGDGIVANCLVF 294

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-------VDKFHKVFS 647
             LI+A+ +     EA  +L  M+  GL PDV TY+TL+ AL R       VDKF+++  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 648 S 648
           +
Sbjct: 355 T 355



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 200/424 (47%), Gaps = 16/424 (3%)

Query: 129 WHSLLKNLCS---SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEA 182
           W+S + +LC    S  + ++ Y++ +   + N+     + Y IL+H     G    +   
Sbjct: 224 WNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNI-----VTYGILLHGYATEGCFADMMSF 278

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F   +   +    L +  LI A A+   +++A+ ++S+M+  G   D   YS +I +L R
Sbjct: 279 FNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCR 338

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS-PK 299
             ++  ++ +  + ++    ++ +  + + +I GF   GD  KA   +      G+  P 
Sbjct: 339 MGRLADAVDK--FNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPN 396

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            A + +++ ++   GR ++A  +F+ +K+ G +     +N L+ GY  +G +  A  V+ 
Sbjct: 397 IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLD 456

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M  +G+ PD  TY+ L++ Y  +GR +    + +EM     KP +  Y+ IL G    G
Sbjct: 457 AMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 ++L EM   G       YN+++    + NC   A+  F ++ +  ++ +  T N
Sbjct: 517 RTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLN 576

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           T+I+  +   R + A++LF  + + G  P  +TY IMI  L ++   E+   +  +M   
Sbjct: 577 TMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKS 636

Query: 540 GLLP 543
           G  P
Sbjct: 637 GCAP 640



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 152/366 (41%), Gaps = 11/366 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           V   L  ++L +  +    +D A  ++S +Q   L       YS LI AL R  +L +A 
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDV-FTYSTLISALCRMGRLADAV 346

Query: 184 -----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY-HCDFINYSLVIQS 237
                ++    +   + Y++LI     + DL KA  L+ +M  +G    +   ++ ++ S
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHS 406

Query: 238 LTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           + +  ++ D+  +  L K+I       D  + N +I G+   G+  KA   L      G+
Sbjct: 407 ICKEGRVMDAHHIFDLVKDI---GERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGI 463

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P T TY  ++     SGR  +   +F E+ +  +KP T  YN +L G  + G    A+ 
Sbjct: 464 GPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQK 523

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ EM   G      TY++++         + A ++ +++   + K N    + ++    
Sbjct: 524 MLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMY 583

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                +    +   +  SG+ P+   Y +MI    K   +  A   F  M   G  P + 
Sbjct: 584 TVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSR 643

Query: 477 TWNTLI 482
             N  I
Sbjct: 644 LLNDTI 649



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 10/299 (3%)

Query: 128 LWHSLLKNLCSSNSSI---DLAYAVVS-WLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           ++HSL++  C+    +   +L Y +++  + + N+ +   +++SI     GR    +  F
Sbjct: 363 VYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKE--GRVMDAHHIF 420

Query: 184 LLSQR--QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
            L +   +R   + +N LI       ++ KA +++  M   G   D   Y+ ++    ++
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +ID  L   L++E+   KI+      N ++ G  +AG    A + L    G G +    
Sbjct: 481 GRIDDGL--NLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLP 538

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L  +  T EA  +F++L    +K      N ++     +   ++A+ + S +
Sbjct: 539 TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
             SG++P+  TY ++I      G  E A  +   ME S   P S + +  +    ++GE
Sbjct: 599 SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGE 657



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/202 (19%), Positives = 91/202 (45%), Gaps = 7/202 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++   +S ++ +   L      ++ + T +TYN ++    R      A  ++ +M 
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G       Y+++++ L R N  D +++  +++++    ++ +   LN +I        
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIV--MFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A          GL P  +TY  +I  L   G   EA+ +F  +++SG  P ++  N 
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647

Query: 341 LLKGYVKMGYLKDAEFVVSEME 362
            ++  ++ G +  A   +S+++
Sbjct: 648 TIRTLLEKGEIVKAGNYMSKVD 669



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 12/144 (8%)

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY +++N      R E      G +   GL  +     T++     + R DDA++ 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM-KENGL-KPD 625
           L           R M   G  P   +   ++    +D R  +A  +L+ M KE G+  PD
Sbjct: 66  L----------LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPD 115

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           VVTY T++    +  K  K  + Y
Sbjct: 116 VVTYNTVIHGFFKEGKIGKACNLY 139


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 30/401 (7%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  + A+  L   QG GLSP   TY  ++ A    G   EA A+   +K  G+ P    Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME- 397
           N L+  + ++G++K A  VV  M   G  PD  TY++L      AG+ + A  +  EME 
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341

Query: 398 VSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +S A P+   Y+ ++ A ++ R       ++L+EM+  GV+P    +N+++ +  K   L
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCS-SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+   +++  EG+ PD IT+NTLID + K G   +A  L +EM  +G    T T N +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE--- 566
           +  L + +R+ED + LL +   +G +P+ V+Y T++  Y +          +D  IE   
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 567 ---------CLEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                     ++GL       +A++    +   GL P     N +I+A+ ++     AF 
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
               M EN  KPDVVT  TLM  L    ++DK  K+F S++
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 254/611 (41%), Gaps = 74/611 (12%)

Query: 101 SALASSPSSLNRVEFKLAESY---RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           SAL+ SPS+L +    +  S    R  P     +LL +   S  ++  A A +S +Q   
Sbjct: 179 SALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFG 238

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKA 212
           L     + Y+ L++A  R   L EA  L  R +      T  TYN L+SA AR   +++A
Sbjct: 239 LSPD-AVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQA 297

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL-DGQLLNDV 271
             ++  M   G+  D   Y+++   L +  K+D +   +L  E+E     L D    N +
Sbjct: 298 TKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF--RLKDEMERLSTALPDVVTYNTL 355

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           +    K   +S A+R L   +  G+ P   T+  V+ +L   G+  EA    E++ E GL
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415

Query: 332 KPRTKAYNALLKGYVKMGYL-----------------------------------KDAEF 356
            P    YN L+  Y K G +                                   +DAE 
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEE 475

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++    + G +PDE +Y  ++ AY      E A  +  +M      P+   Y+ ++ G  
Sbjct: 476 LLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLC 535

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                +     L E+   G+ PD   YN++I  + K   L +A    ++M+    +PD +
Sbjct: 536 RMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVV 595

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T NTL++     G+ D+A +LFE   E+G      TYN +I  + +    +       +M
Sbjct: 596 TCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM 655

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL---- 592
             +GL P+  TY  ++    ++GR ++A   L  L+D      +      LKPS+     
Sbjct: 656 EVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLKPSSADEAD 714

Query: 593 -------------------ALNSL---INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
                              AL +    +N      +  EA AVL  M + G+  D  TY 
Sbjct: 715 VKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYI 774

Query: 631 TLMKALIRVDK 641
           TLM+ LI+  K
Sbjct: 775 TLMEGLIKRQK 785


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 195/463 (42%), Gaps = 49/463 (10%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           TP  Y+  + A  R      A+ ++  +   G   D  N +LV+Q++     +D ++   
Sbjct: 145 TPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV--- 201

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
                         +LL D++  F                   G  P   +Y AV+  L 
Sbjct: 202 --------------RLLRDLLPSF-------------------GCEPDVVSYNAVLRGLC 228

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + R    + + EE+  +G  P    ++ L+    + G  +    V ++M   G  PD  
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ +ID      R E AR +L  M      PN   Y+ +L G      W+    +L EM
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                  D   +N+++D   +   +   +   ++ML  G  PD IT+ T+I+   K G  
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A  L   M   G  P T +Y I++  L   ERW D + L+  M  QG  PN VT+ TL
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTL 468

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++             C +GL +QA+   + M  +G  P  ++ +++I+  G+     EA 
Sbjct: 469 INFL-----------CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
            +L  M + G+ P+ + Y+++  AL    + +KV    +F NI
Sbjct: 518 ELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQ--MFENI 558



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 2/373 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YNA++             +LM +M   G   + + +S +I  L R    +   + +++
Sbjct: 218 VSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFER--VHEVH 275

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++       D ++   +I G  K      A   L      GLSP    Y  ++  L ++
Sbjct: 276 AQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSA 335

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  EAE +  E+ +         +N L+    + G +     V+ +M   G +PD  TY
Sbjct: 336 DRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITY 395

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +I+ +   G  + A ++L+ M     +PN+  Y+ +L G      W    +++ +M  
Sbjct: 396 TTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ 455

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G  D 
Sbjct: 456 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDE 515

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL   M ++G  P T  Y+ + + L  + R   V ++  N++   +  + V Y  ++ 
Sbjct: 516 ALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVIS 575

Query: 554 IYGQSGRFDDAIE 566
              + G  D AIE
Sbjct: 576 SLCKRGETDRAIE 588


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 237/521 (45%), Gaps = 20/521 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           +++L+  LC  + ++D A+     + K  +  +  + YS+LI+ L + EK  EA  +   
Sbjct: 351 YNNLIHGLCK-HGNLDEAFRFKEKMVKDGVNATL-ITYSVLINGLMKLEKFNEANSVLKE 408

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  +  TP  + YN LI    +  +L  AL +   M   G + + +  + +IQ   +  +
Sbjct: 409 TLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQ 468

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ +  + + +E+      ++      +I           A+RFL       + P     
Sbjct: 469 MEQA--ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 526

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++  L   G+  +A  ++  L E G        NAL+ G  K G +++A  ++ +M  
Sbjct: 527 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 586

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G + D+ TY+ LI      G+ E    +  EM     +P++F Y+ ++ G    G+   
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +  E KS  + P+ + Y VMID + K + +      F  +L++ +E +++ +NTLI 
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            + + G    A +L ++M+ +G  P T TY+ +I+ +    R ED K L+  MR +GLLP
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVV YT L+  Y           C  G  D+ VN  + M +  + P+ +    +I+ + +
Sbjct: 767 NVVCYTALIGGY-----------CKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSK 815

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                 A  +L  M   G+ PD VTY  L     +  K  +
Sbjct: 816 SGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 226/536 (42%), Gaps = 90/536 (16%)

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           FL ++    T  T   L+S+  + ++LEK+  +   MRQ G   D   +S  I +  +  
Sbjct: 269 FLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGG 327

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           K++ ++  +L+ ++E   +  +    N++I G  K G+  +A RF       G++    T
Sbjct: 328 KVEDAI--QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 385

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+ +I  L    +  EA +V +E  E G  P    YN L+ GY KMG L DA  +  +M 
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445

Query: 363 RSGVLPDEHTYSLLIDAYANAG-----------------------------------RWE 387
             G+ P+  T + +I  +   G                                   R+E
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE-------W------------------- 421
           SA   L+EM + + +PN  + + ++ G    G+       W                   
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565

Query: 422 ---------QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                    Q   ++LK+M   G   D   YN +I    K   +         M+ +GIE
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PDT T+N LI    + G+ D A  L+ E + R   P   TY +MI+   + ++ E+ ++L
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDGLKP 589
              +  Q L  N V Y TL+  Y ++G                V AF++   MR+ G+ P
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNG--------------NTVEAFKLHDDMRSKGIPP 731

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +    +SLI+      R  +A  ++  M++ GL P+VV YT L+    ++ +  KV
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 146/307 (47%), Gaps = 2/307 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T NALI    +  ++++A+ L+ KM + G+  D I Y+ +I    +  K++     KL 
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF--KLR 616

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    IE D    N +I G  + G   +A+      +   L P   TY  +I     +
Sbjct: 617 GEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 676

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  E E +F EL    L+  +  YN L++ Y + G   +A  +  +M   G+ P   TY
Sbjct: 677 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 736

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI    N GR E A+ ++ EM      PN   Y+ ++ GY   G+  +   VL+EM S
Sbjct: 737 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 796

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   Y VMID + K   +  A      M+ +GI PDT+T+N L +   K G+ + 
Sbjct: 797 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856

Query: 494 AEELFEE 500
            + L E+
Sbjct: 857 GKLLAED 863



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 201/498 (40%), Gaps = 66/498 (13%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK--IE 262
           RN     A+ +   +   G        + ++ SL + N+     L+K Y   E  +  + 
Sbjct: 256 RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANE-----LEKSYWVFETMRQGVS 310

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  L +  I  F K G    A++     + +G+SP   TY  +I  L   G   EA   
Sbjct: 311 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRF 370

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E++ + G+      Y+ L+ G +K+    +A  V+ E    G  P+E  Y+ LID Y  
Sbjct: 371 KEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCK 430

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------- 435
            G    A  +  +M      PNS   + I+ G+   G+ ++   +L+EM S G       
Sbjct: 431 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 490

Query: 436 ----------------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
                                       + P+      ++    K      A+  + R+L
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G   + +T N LI    K G    A  L ++M ERG+     TYN +I+   ++ + E
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI----EC---------------L 568
           +  +L G M  QG+ P+  TY  L+    + G+ D+A+    EC               +
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670

Query: 569 EGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           +G       ++    F  + T  L+ +++  N+LI A+  +    EAF +   M+  G+ 
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730

Query: 624 PDVVTYTTLMKALIRVDK 641
           P   TY++L+  +  + +
Sbjct: 731 PTTATYSSLIHGMCNIGR 748



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 159/372 (42%), Gaps = 7/372 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ +IH L  + +   A      +L +  R        L+    +      A+ L  ++ 
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  + +  + +I  L +T  +  ++  +L K++      LD    N +I G  K G 
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAV--RLLKKMLERGFVLDKITYNTLISGCCKEGK 608

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +  +  G     G+ P T TY  +I  +   G+  EA  ++ E K   L P    Y  
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K   +++ E + +E+    +  +   Y+ LI AY   G    A  +  +M    
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  YS ++ G  + G  +    ++ EM+  G+ P+   Y  +I  + K   +   +
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M S  I P+ IT+  +ID + K G    A +L  EM  +G  P T TYN++ N  
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848

Query: 521 GEQERWEDVKRL 532
            ++ + E+ K L
Sbjct: 849 CKEGKIEEGKLL 860


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 204/449 (45%), Gaps = 16/449 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            R  +LE+    +  M   G   D I  + +I+   R  K   +   K+ + +E      
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA--AKILEILEGSGAVP 170

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I G+ KAG+ + A+  L     + +SP   TY  ++ +L +SG+  +A  V 
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + + +    P    Y  L++   +   +  A  ++ EM   G  PD  TY++L++     
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR + A   L +M  S  +PN   ++ IL      G W    ++L +M   G  P    +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+   +   L  A+   ++M   G +P+++++N L+    K  + DRA E  E M  
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   TYN M+  L +  + ED   +L  + ++G  P ++TY T++D   ++G+   
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           AI+ L+            MR   LKP  +  +SL+     + +  EA       +  G++
Sbjct: 468 AIKLLD-----------EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           P+ VT+ ++M  L +  +  +     +F 
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 207/448 (46%), Gaps = 22/448 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-- 248
           + P T   LI    R     KA  ++  +   G   D I Y+++I    +  +I+++L  
Sbjct: 137 IIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L ++        +  D    N ++     +G   +AM  L         P   TY  +I 
Sbjct: 195 LDRM-------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A         A  + +E+++ G  P    YN L+ G  K G L +A   +++M  SG  P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  T+++++ +  + GRW  A  +L +M      P+   ++ ++     +G   R   +L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M   G +P++  YN ++  F K   +  A+   +RM+S G  PD +T+NT++    K 
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+ + A E+  ++  +G  P   TYN +I+ L +  +     +LL  MRA+ L P+ +TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           ++LV    + G+ D+AI+            F      G++P+ +  NS++    + ++  
Sbjct: 488 SSLVGGLSREGKVDEAIK-----------FFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            A   L +M   G KP+  +YT L++ L
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGL 564



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 198/415 (47%), Gaps = 4/415 (0%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           + Y+++I    ++ ++  A  +  R  ++P  +TYN ++ +   +  L++A+ ++ +M Q
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
              + D I Y+++I++  R + +  ++  KL  E+       D    N ++ G  K G  
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAM--KLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A++FL      G  P   T+  ++ ++ ++GR ++AE +  ++   G  P    +N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           +    + G L  A  ++ +M + G  P+  +Y+ L+  +    + + A   L+ M     
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   Y+ +L      G+ +   ++L ++ S G  P    YN +ID   K      A+ 
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D M ++ ++PDTIT+++L+    + G+ D A + F E +  G  P   T+N ++  L 
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  + +     L  M  +G  PN  +YT L++     G   +A+E L  L ++ +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 184/420 (43%), Gaps = 46/420 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++++L++LC S         +   LQ+   CY   + Y+ILI A  R   +  A  L   
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITYTILIEATCRDSGVGHAMKLLDE 264

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R    TP  +TYN L++   +   L++A+  ++ M   G   + I ++++++S+  T +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 244 -IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D+                   +LL D++                      G SP   T
Sbjct: 325 WMDAE------------------KLLADMLRK--------------------GFSPSVVT 346

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I  L   G    A  + E++ + G +P + +YN LL G+ K   +  A   +  M 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  PD  TY+ ++ A    G+ E A  +L ++      P    Y+ ++ G    G+  
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++L EM++  ++PDT  Y+ ++    +   +  A+  F      GI P+ +T+N+++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K  + DRA +    M  RG  P  T+Y I+I  L  +   ++   LL  +  +GL+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 230/492 (46%), Gaps = 19/492 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G + +  +A+ L +R R      + +++N++++   +   +++AL+L   M+
Sbjct: 56  YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +D    +   Y+++I  L    +++ +   ++  E+E   +  +   +N ++    KA  
Sbjct: 116 KDA-EPNSSTYNIIIDMLCLGGRVEEAY--RILDEMEHASLFPNLLTVNIMVDRLCKARK 172

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +    A   G +P   TY ++I  L   G+  EA  +FE++ ++G       Y +
Sbjct: 173 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++ +   G  +D   +  E+ R G  PD    +  +D    AG  E  R++ +++    
Sbjct: 233 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 292

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   YS ++ G    G+ + T  +   MK  G   D   YN ++D F K   +H A 
Sbjct: 293 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 352

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M  + ++P   T+  ++D   K  R D A  LFEE + +G       Y+ +I+  
Sbjct: 353 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 412

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  R ++   +L  M  +GL PNV T+ +L+D   ++   ++A+ C           F+
Sbjct: 413 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC-----------FQ 461

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M+     P+    + LIN     Q+  +AF   Q M++ GL P+VVTYTT++  L +V 
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521

Query: 641 KFHKVFSSYLFF 652
                +S +  F
Sbjct: 522 NITDAYSLFERF 533



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 224/488 (45%), Gaps = 17/488 (3%)

Query: 161 SYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           SY  +  +L  A  LG +E+L+ A + ++R       YN +I         E A  L+ +
Sbjct: 20  SYTSMIWVLCKAGRLGEAEELF-AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 78

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +R+ G     ++++ ++  L +  K+D +L   L++ ++ D  E +    N +I      
Sbjct: 79  LRERGCIPSVVSFNSILTCLGKKRKVDEAL--SLFEVMKKDA-EPNSSTYNIIIDMLCLG 135

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A R L   +   L P   T   ++  L  + +  EA  +FE   + G  P    Y
Sbjct: 136 GRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY 195

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            +L+ G  K G + +A  +  +M  +G   +   Y+ LI  +   GR E    + KE+  
Sbjct: 196 CSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIR 255

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+  + +  +      GE ++   + ++++S G  PD   Y+++I    K      
Sbjct: 256 RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARE 315

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F  M  +G   D   +N ++D   K G+  +A E+ EEM+E+   P   TY  +++
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L + +R ++   L    +++G+  NVV Y++L+D +G+ GR D+A   LE         
Sbjct: 376 GLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE-------- 427

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M   GL P+    NSL++A  + +   EA    Q MKE    P+  TY+ L+  L R
Sbjct: 428 ---MMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484

Query: 639 VDKFHKVF 646
           V K++K F
Sbjct: 485 VQKYNKAF 492



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 198/451 (43%), Gaps = 18/451 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L   GR E+ Y      +   L P  LT N ++    +   LE+A  +     
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G + D + Y  +I  L +  ++D +   +L++++       +  +   +I  F   G 
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAY--RLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +        G  P        +  +  +G   +   +FE+++  G  P  ++Y+ 
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 302

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++   +   M++ G   D   Y+ ++D +  +G+   A  +L+EM+   
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P    Y  I+ G          + + +E KS G+E +   Y+ +ID FGK   +  A 
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M+ +G+ P+  TWN+L+D   K    + A   F+ M+E    P T TY+I+IN L
Sbjct: 423 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
              +++        +M+ QGL+PNVVTYTT++    + G   D           A + F 
Sbjct: 483 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD-----------AYSLFE 531

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
             + +G  P   + N+LI       R  EA+
Sbjct: 532 RFKANGGIPDAASFNALIEGMSNANRAMEAY 562



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 214/443 (48%), Gaps = 8/443 (1%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P    ++++ ++      ++ AY ++  ++  +L +   L  +I++  L ++ KL EA
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL-FPNLLTVNIMVDRLCKARKLEEA 176

Query: 183 FLL--SQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           + +  S  QR   P  +TY +LI    +   +++A  L  KM   G++ + + Y+ +I++
Sbjct: 177 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 236

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
                + +     K++KE+     + D  LLN  +    KAG+  K        +  G  
Sbjct: 237 FFIHGRKEDG--HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 294

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   +Y+ +I  L+ +G+  E   +F  +K+ G     +AYNA++ G+ K G +  A  +
Sbjct: 295 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI 354

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + EM+   V P   TY  ++D  A   R + A ++ +E +    + N  +YS ++ G+  
Sbjct: 355 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGK 414

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G     + +L+EM   G+ P+ + +N ++D   K   ++ A+  F  M      P+T T
Sbjct: 415 VGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 474

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++ LI+   +  +Y++A   +++MQ++G  P   TY  MI+ L +     D   L    +
Sbjct: 475 YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFK 534

Query: 538 AQGLLPNVVTYTTLVDIYGQSGR 560
           A G +P+  ++  L++    + R
Sbjct: 535 ANGGIPDAASFNALIEGMSNANR 557



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/459 (22%), Positives = 190/459 (41%), Gaps = 93/459 (20%)

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A +F    +  GL P   +Y ++I  L  +GR  EAE +F +++     P   AYN ++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 344 GYVKMGYLKDAEFVVSEMERSGVL----------------------------------PD 369
           GY   G  +DA  ++  +   G +                                  P+
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+++ID     GR E A  +L EME +   PN    + ++       + +  +++ +
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS--------------------- 468
                G  PD   Y  +ID  GK   +  A   F++ML                      
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 469 --------------EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                          G +PD    NT +DC FK G  ++   +FE+++  G+ P   +Y+
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----- 569
           I+I+ L +  +  +   +   M+ QG   +   Y  +VD + +SG+   A E LE     
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 570 --------------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                         GL+     D+A   F   ++ G++ + +  +SLI+ FG+  R  EA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + +L+ M + GL P+V T+ +L+ AL++ ++ ++    +
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCF 460



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 26/214 (12%)

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  + ++G++PD +++ ++I    K GR   AEELF +M+     PC   YN MI   G 
Sbjct: 6   FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------- 566
             R+ED  +LL  +R +G +P+VV++ +++   G+  + D+A+                 
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTY 125

Query: 567 -------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  CL G  ++A      M    L P+ L +N +++   + ++  EA+ + +   +
Sbjct: 126 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 185

Query: 620 NGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            G  PD VTY +L+  L +   VD+ +++F   L
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 219


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 222/528 (42%), Gaps = 57/528 (10%)

Query: 118 AESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
           A + +  P      +L + C     ++L +A +  + K  L  +  + ++ L+  L   +
Sbjct: 4   AGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGL-RADAVAFTPLLRTLCAKK 62

Query: 178 KLYEAFLLSQRQR----LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFI 229
           +  +A  +  R+      TP   +Y+ L+         E+A  L+  M +DG +C  D +
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           +YS VI                                      GF K GD  KA     
Sbjct: 123 SYSTVIH-------------------------------------GFFKEGDVGKAYTLFC 145

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G+ P   T  +VI  L       +AEAV +++ +  + P    YN+L+ GY+  G
Sbjct: 146 KMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSG 205

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
              +A  ++ EM R G  P+  TY++LID    +G    AR +   M  S  KP++  Y 
Sbjct: 206 QWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYG 265

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +L GY   G       V   M  +G+  + H +++ I  + K   L  A   F +M   
Sbjct: 266 SLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQL 325

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  PD +T+ T+ID   K GR D A   F +M + G  P   T+  +I+      +WE  
Sbjct: 326 GFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKA 385

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           + L   M  +G+ P+V  +T ++D   + G+             +A   F +M   G KP
Sbjct: 386 EELFYEMMDRGIPPDVTIFTAMIDRLFKEGKV-----------TEAQKLFDLMPRAGAKP 434

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           + ++ N++I+ +       E   +L  M   GLKP  VT+ TL+  ++
Sbjct: 435 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 214/509 (42%), Gaps = 41/509 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA----FL 184
           +  LL+ LC+   + D    V+  + +   C      YS L+  L   +K  EA     +
Sbjct: 51  FTPLLRTLCAKKRTSDAMNIVLRRMPELG-CTPDVFSYSTLLKGLCAEKKCEEAAELIHM 109

Query: 185 LSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +++     P   ++Y+ +I    +  D+ KA  L  KM   G   + +  + VI  L + 
Sbjct: 110 MAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 169

Query: 242 NKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
             +D +  +LQ++  E     I  +    N +I G+  +G  ++A+R L      G  P 
Sbjct: 170 QAMDKAEAVLQQMIDE----HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPN 225

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I  L  SG   EA  +F  + +SG KP    Y +LL GY   G L +   V  
Sbjct: 226 VVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKD 285

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M ++G+  + HT+S+ I AY   GR + A +   +M+     P+   Y+ ++ G    G
Sbjct: 286 LMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                     +M   G+ P+   +  +I  F  Y     A   F  M+  GI PD   + 
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFT 405

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +ID  FK G+   A++LF+ M   G  P   +YN MI+         +V +LL +M   
Sbjct: 406 AMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 465

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL P  VT+ TL+D                            M + GLKP      +LI+
Sbjct: 466 GLKPTAVTFNTLLD---------------------------GMVSMGLKPDVDTCKTLID 498

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           +  ED R  +   + + M     K D +T
Sbjct: 499 SCCEDGRIEDILTLFREMLGKADKTDTIT 527



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 13/350 (3%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG--LKPRTKAYNALLKGYVKMGYL 351
           +G +P   +Y+ ++  L    +  EA  +   + E G    P   +Y+ ++ G+ K G +
Sbjct: 78  LGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDV 137

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  +  +M   G+ P+  T + +ID        + A  VL++M   H  PN   Y+ +
Sbjct: 138 GKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSL 197

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G+W    ++LKEM   G  P+   YN++ID   K      A   F+ M+  G 
Sbjct: 198 IHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGP 257

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  T+ +L+  +   G       + + M + G      T++I I    +  R ++   
Sbjct: 258 KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M+  G +P++VTYTT++D   + GR DDA+           + F  M  DGL P+ 
Sbjct: 318 TFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM-----------SRFCQMIDDGLSPNI 366

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +   +LI+ F    +  +A  +   M + G+ PDV  +T ++  L +  K
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGK 416



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 14/357 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA- 354
           ++P  AT+  +I+   ++G      A   ++ ++GL+    A+  LL+         DA 
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRIL 412
             V+  M   G  PD  +YS L+       + E A  ++  M  +  +  P+   YS ++
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G+   G+  + + +  +M   G+ P+    N +ID   K   +  A A   +M+ E I 
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+N+LI  +   G++  A  + +EM   G  P   TYN++I+ L +     + + +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             +M   G  P+  TY +L+  Y   G              +  N   +M  +G++ ++ 
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLV-----------EMNNVKDLMVQNGMRSNHH 297

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +  I A+ +  R  EA      M++ G  PD+VTYTT++  L ++ +     S +
Sbjct: 298 TFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRF 354



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 25/320 (7%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI  L +S    EA      ++    +    TY +L+   A   +L +  N+   M 
Sbjct: 229 YNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMV 288

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q+G   +   +S+ I +  +  ++D + L   + +++      D      VI G  K G 
Sbjct: 289 QNGMRSNHHTFSIEIYAYCKCGRLDEASLT--FIKMQQLGFMPDIVTYTTVIDGLCKIGR 346

Query: 281 ASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              AM RF  M    GLSP   T+  +I   S  G+  +AE +F E+ + G+ P    + 
Sbjct: 347 LDDAMSRFCQMIDD-GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFT 405

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           A++    K G + +A+ +   M R+G  P+  +Y+ +I  Y  AG       +L +M + 
Sbjct: 406 AMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 465

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP +  ++ +L G                M S G++PD      +ID+  +   +   
Sbjct: 466 GLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDI 509

Query: 460 MAAFDRMLSEGIEPDTITWN 479
           +  F  ML +  + DTIT N
Sbjct: 510 LTLFREMLGKADKTDTITEN 529


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 225/508 (44%), Gaps = 23/508 (4%)

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
           +++L   VV +    NL      +Y+ LI +L +  K +EA LL  R      R   +TY
Sbjct: 351 ALNLVKRVVDFGVSPNL-----FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + LI    R   L+ AL+ + +M   G       Y+ +I    +   I ++  +    E+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA--EGFMAEM 463

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
              K+E        ++ G+   G  +KA+R      G G++P   T+  +++ L  +G  
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A  +F E+ E  +KP    YN +++GY + G +  A   + EM   G++PD ++Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I      G+   A++ +  +   + + N   Y+ +L G+   G+ +    V +EM   GV
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           + D   Y V+ID   K+            M   G++PD + + ++ID   K G +  A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +++ M   G  P   TY  +IN L +     + + L   M+    +PN VTY   +DI  
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G  D           +AV     +   GL  +    N LI  F    R  EA  ++  
Sbjct: 764 K-GEVD---------MQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITR 812

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHK 644
           M  +G+ PD +TYTT++  L R +   K
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKK 840



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 204/467 (43%), Gaps = 26/467 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN LI    +   + +A+ +   +       D + Y  ++  L +  + +  L  ++  E
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL--EMMDE 322

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           + C +       ++ ++ G  K G   +A+  +      G+SP    Y A+I +L    +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EAE +F+ + + GL+P    Y+ L+  + + G L  A   + EM  +G+    + Y+ 
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+ +   G   +A   + EM     +P    Y+ ++ GY  +G+  +  ++  EM   G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P  + +  ++    +   +  A+  F+ M    ++P+ +T+N +I+ + + G   +A 
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E  +EM E+G  P T +Y  +I+ L    +  + K  +  +       N + YT L+  +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622

Query: 556 GQSGRFDDAIECLEGLSDQAVN------------------------AFRVMRTDGLKPSN 591
            + G+ ++A+   + +  + V+                          + M   GLKP +
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +   S+I+A  +     EAF +   M   G  P+ VTYT ++  L +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 63/462 (13%)

Query: 231 YSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIEL--DGQLLNDVIVGFAKAGDASKAMRF 287
           + L+IQ   R+ ++ D  L+ K+       K+ L  + + L+ ++ G  K      AM  
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM----ITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                 VG+ P    Y  VI +L        A+ +   ++ +G       YN L+ G  K
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              + +A  +  ++    + PD  TY  L+        +E    ++ EM      P+   
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
            S ++ G R RG+ +    ++K +   GV P+   YN +ID+  K    H A   FDRM 
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN--------- 518
             G+ P+ +T++ LID   + G+ D A     EM + G       YN +IN         
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454

Query: 519 -----------------------LLG---EQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
                                  L+G    + +     RL   M  +G+ P++ T+TTL+
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                SG F        GL   AV  F  M    +KP+ +  N +I  + E+   ++AF 
Sbjct: 515 -----SGLFR------AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563

Query: 613 VLQYMKENGLKPDVVTYTTLMKAL----------IRVDKFHK 644
            L+ M E G+ PD  +Y  L+  L          + VD  HK
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 180/450 (40%), Gaps = 54/450 (12%)

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           + A +++++   T +TY +L+        + KAL L  +M   G       ++ ++  L 
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R   I  ++  KL+ E+    ++ +    N +I G+ + GD SKA  FL      G+ P 
Sbjct: 519 RAGLIRDAV--KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T +Y  +I  L  +G+  EA+   + L +   +     Y  LL G+ + G L++A  V  
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636

Query: 360 EMERSGV-----------------------------------LPDEHTYSLLIDAYANAG 384
           EM + GV                                    PD+  Y+ +IDA +  G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
            ++ A  +   M      PN   Y+ ++ G    G       +  +M+     P+   Y 
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
             +D   K              + +G+  +T T+N LI    + GR + A EL   M   
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           G  P   TY  MIN   E  R  DVK+   L  +M  +G+ P+ V Y TL  I+G     
Sbjct: 817 GVSPDCITYTTMIN---ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IHGC---- 867

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
                C+ G   +A      M   GL P+N
Sbjct: 868 -----CVAGEMGKATELRNEMLRQGLIPNN 892



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 38/350 (10%)

Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           YSY  L++ + +       K++   L      L  + Y  L+    R   LE+AL++  +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M Q G   D + Y ++I    +    D  L   L KE+  D+                  
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHK--DRKLFFGLLKEMH-DR------------------ 676

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                           GL P    Y ++I A S +G   EA  +++ +   G  P    Y
Sbjct: 677 ----------------GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            A++ G  K G++ +AE + S+M+    +P++ TY   +D            + L    +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N+  Y+ ++ G+  +G  +   +++  M   GV PD   Y  MI+   + N +  
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           A+  ++ M  +GI PD + +NTLI      G   +A EL  EM  +G  P
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 18/341 (5%)

Query: 313 SGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           S R ++   VF+ +  +  L P  +  +ALL G VK  +   A  + ++M   G+ PD +
Sbjct: 169 SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVY 228

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ +I +         A+ ++  ME +    N   Y+ ++ G   + +      + K++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
               ++PD   Y  ++    K       +   D ML     P     ++L++   K G+ 
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A  L + + + G  P    YN +I+ L +  ++ + + L   M   GL PN VTY+ L
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA---FGEDQRDA 608
           +D++ + G+ D A+  L  + D            GLK S    NSLIN    FG D   A
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDT-----------GLKLSVYPYNSLINGHCKFG-DISAA 456

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           E F  +  M    L+P VVTYT+LM       K +K    Y
Sbjct: 457 EGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 222/466 (47%), Gaps = 21/466 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S I LA A++  + K  L Y   ++  S L++     +++ +A  L  +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 R   +T+  LI     ++   +A+ L+ +M Q G   + + Y +V+  L +   
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ID  L   L  ++E  KIE +  + + VI    K      A+      +  G+ P   TY
Sbjct: 241 ID--LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I+ L N  R  +A  +  ++ E  + P    +NAL+  +VK G L +AE +  EM +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TYS LI+ +    R + A+ + + M      PN   Y+ ++ G+        
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  +T  Y  +I  F +     +A   F +M+S+G+ P+ +T+NTL+D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+ ++A  +FE +Q     P   TYNIMI  + +  + ED   L  ++  +G+ P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           +V+ Y T++  +           C +GL ++A   FR MR DG  P
Sbjct: 539 DVIIYNTMISGF-----------CRKGLKEEADALFRKMREDGPLP 573



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 216/448 (48%), Gaps = 17/448 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           +N L+SA A+    +  ++L  KM++ G   +   Y+++I    R ++I  +L  L K+ 
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K      I     LLN    G+      S A+  +     +G  P T T+  +I  L   
Sbjct: 148 KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA A+ + + + G +P    Y  ++ G  K G +  A  ++++ME + +  +   Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +ID+       + A  +  EME    +PN   YS +++   +   W    ++L +M  
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   +N +ID F K   L  A   +D M+   I+PD  T+++LI+      R D 
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +FE M  +  FP   TYN +IN   + +R ++   L   M  +GL+ N VTYTTL  
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL-- 441

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           I+G    F  A +C     D A   F+ M +DG+ P+ +  N+L++   ++ +  +A  V
Sbjct: 442 IHG----FFQARDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
            +Y++ + ++P + TY  +++ + +  K
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGK 520



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 42/389 (10%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSK 218
           + ++ LIH L    K  EA  L  R  QR   P  +TY  +++   +  D++ A NL++K
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE------------------CD- 259
           M       + + YS VI SL +    D +L   L+ E+E                  C+ 
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDAL--NLFTEMENKGVRPNVITYSSLISCLCNY 308

Query: 260 ----------------KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                           KI  +    N +I  F K G   +A +         + P   TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I       R  EA+ +FE +      P    YN L+ G+ K   + +   +  EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++ +  TY+ LI  +  A   ++A++V K+M      PN   Y+ +L G    G+ ++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              V + ++ S +EP  + YN+MI+   K   +      F  +  +G++PD I +NT+I 
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              + G  + A+ LF +M+E G  P + T
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  +L+  +    L DA  +   M +S  LP    ++ L+ A A   +++    + ++M+
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 N + Y+ ++  +  R +      +L +M   G EP     + +++ +     + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+A  D+M+  G  PDTIT+ TLI   F   +   A  L + M +RG  P   TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L ++   +    LL  M A  +  NVV Y+T++D             C     D A+N
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL-----------CKYRHEDDALN 281

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M   G++P+ +  +SLI+     +R ++A  +L  M E  + P+VVT+  L+ A +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341

Query: 638 RVDKF 642
           +  K 
Sbjct: 342 KEGKL 346


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 227/493 (46%), Gaps = 23/493 (4%)

Query: 161 SYELLYSILIHALGRS---EKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           SY ++  IL+ A   S      YE  +LS+    T  T+  ++ A    ++++ A +L+ 
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYE--MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLR 232

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y  +I +L++ ++++ +L  KL +E+       D    NDVI G  +
Sbjct: 233 DMTKHGCVPNSVVYQTLIHALSKRDRVNEAL--KLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +  + +      G +P   TY  ++  L   G+  EA+ +  ++      P    
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVH 346

Query: 338 YNALLKGYVKMGYLKDAE-FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +  L+ GYVK G L +A  F+  +M ++G  PD  T++ LI      G   SA  ++ +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +   PN   Y+ +L G+  + + +    VL EM + G E +   YNV++    K   +
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+     M  +G +PD  T+NTLI    K  R + A  L+ +M   G    T TYN +
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+        ++  +L+ +M  +G   + +TY  L+  +           C  G +++A+
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAF-----------CKLGATEKAL 575

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  M    L PSN++ N LIN      +   A  +L+ M   GL PDVVTY +L+  L
Sbjct: 576 GLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635

Query: 637 IRVDKFHKVFSSY 649
            ++    + F+ +
Sbjct: 636 CKMGNIREAFNLF 648



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 244/547 (44%), Gaps = 37/547 (6%)

Query: 104 ASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE 163
           A+ PS    V +++           +  ++K LC  N  +D A +++  + KH  C    
Sbjct: 186 ANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE-VDNACSLLRDMTKHG-CVPNS 243

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSK 218
           ++Y  LIHAL + +++ EA  L +   L        T+N +I    R + + +   L+ +
Sbjct: 244 VVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDR 303

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV-----IV 273
           M   G+  + I Y +++  L R  K+D +  Q L  ++            NDV     I 
Sbjct: 304 MLFRGFTPNDITYGVLMNGLCRVGKVDEA--QVLLNKVPTP---------NDVHFTILIN 352

Query: 274 GFAKAGDASKAMRFL--GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           G+ K+G   +A  FL   M +  G  P   T+  +I  L   G    A  +  ++  +G 
Sbjct: 353 GYVKSGRLDEANAFLYDKMIKN-GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGC 411

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    Y  LL G+ K   L++A +V++EM   G   +   Y++L+ A    G+   A  
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L EM     KP+ F ++ ++ G       +    + ++M   GV  +T  YN +I  F 
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +   +  A+   + ML  G   D IT+N LI    K G  ++A  LF+EM  +   P   
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           + N++IN L    +  +   LL +M  +GL P+VVTY +L++   + G   +A       
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF------ 645

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                N F  ++ +G++P  +  N+LI          +A+ +L    EN   P+ VT+  
Sbjct: 646 -----NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYI 700

Query: 632 LMKALIR 638
           L+   I+
Sbjct: 701 LVSNFIK 707



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 43/350 (12%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P  K+YN +L   V       A  V  EM   GV+P  +T+ +++ A       ++A  
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L++M      PNS +Y  ++     R       ++L+EM   G  PD   +N +I    
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLI-----------------------DCHF-- 486
           + N +H      DRML  G  P+ IT+  L+                       D HF  
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTI 349

Query: 487 ------KCGRYDRAEE-LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
                 K GR D A   L+++M + G  P   T+N +I+ L ++        ++ +M A 
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PN++TYTTL+D + +  + ++A   L  +S +           G + + +  N L+ 
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAK-----------GFELNIMGYNVLLR 458

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           A  ++ +  +A  +L  M + G KPD+ T+ TL+  L +VD+     + Y
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALY 508


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 205/437 (46%), Gaps = 16/437 (3%)

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           +LE+ ++L  KM Q       +++S V+  + ++   D  L+  L+  +E   I  D   
Sbjct: 49  NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD--LVISLFHHMEVCGIGHDLYS 106

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N VI    +      A+  +G     G  P   T +++I       R  +A  +  +++
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E G +P    YN ++ G  K+G + DA  +   MER GV  D  TY+ L+     +GRW 
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  ++++M +    PN   ++ ++  +   G++    ++ +EM    V+PD   YN +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +    +  +  A    D M+++G  PD +T+NTLI+   K  R D   +LF EM +RG  
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
             T TYN +I    +  R +  + +   M ++   PN+ TY+ L  +YG          C
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGL---------C 392

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           +    ++A+  F  M+   ++      N +I+   +     +A+ + + +   GLKPDVV
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452

Query: 628 TYTTLMKALIRVDKFHK 644
           +YTT++    R  ++ K
Sbjct: 453 SYTTMISGFCRKRQWDK 469



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 18/405 (4%)

Query: 149 VVSWLQKHNLCYSYELLYS--ILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALIS 201
           V+S      +C     LYS  I+I+ L R  +   A  ++ +  +       +T ++LI+
Sbjct: 88  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
              + + +  A++L+SKM + G+  D + Y+ +I    +   ++ ++  +L+  +E D +
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV--ELFDRMERDGV 205

Query: 262 ELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             D    N ++ G   +G   DA++ MR + M   V   P   T+ AVI      G+  E
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV---PNVITFTAVIDVFVKEGKFSE 262

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  ++EE+    + P    YN+L+ G    G + +A+ ++  M   G LPD  TY+ LI+
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +  + R +    + +EM       ++  Y+ I+ GY   G      ++   M S    P
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RP 379

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   Y++++        +  A+  F+ M    IE D  T+N +I    K G  + A +LF
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             +  +G  P   +Y  MI+    + +W+    L   M+  GLLP
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 211/471 (44%), Gaps = 32/471 (6%)

Query: 50  SSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQR----YDFTPLLNFLSENSNSESASALAS 105
           S F   +F++K++    EEE D     +Q +      DF+ +L+ ++++ N +   +L  
Sbjct: 34  SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISL-- 91

Query: 106 SPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE-- 163
                    F   E          ++++ N     S   +A +VV  + K    + YE  
Sbjct: 92  ---------FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK----FGYEPD 138

Query: 164 -LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMS 217
            +  S LI+   +  ++++A  L  +      R   + YN +I    +   +  A+ L  
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M +DG   D + Y+ ++  L  + +   +   +L +++    I  +      VI  F K
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDA--ARLMRDMVMRDIVPNVITFTAVIDVFVK 256

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S+AM+         + P   TY ++I  L   GR  EA+ + + +   G  P    
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G+ K   + +   +  EM + G++ D  TY+ +I  Y  AGR ++A+ +   M+
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
              ++PN   YS +L G       ++   + + M+ S +E D   YN++I    K   + 
Sbjct: 377 ---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            A   F  +  +G++PD +++ T+I    +  ++D+++ L+ +MQE G  P
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            ++ F  M   GI  D  ++N +I+C  +C R+  A  +  +M + GY P   T + +IN
Sbjct: 88  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R  D   L+  M   G  P+VV Y T++D             C  GL + AV  
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID-----------GSCKIGLVNDAVEL 196

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M  DG++   +  NSL+       R ++A  +++ M    + P+V+T+T ++   ++
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256

Query: 639 VDKFHKVFSSY 649
             KF +    Y
Sbjct: 257 EGKFSEAMKLY 267


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 215/496 (43%), Gaps = 24/496 (4%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKAL 213
           CY+   +Y ++I A  R     +A  L        +      Y   IS   +  D ++AL
Sbjct: 181 CYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRAL 240

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++ KMR+ G+    + YS V+  L +  ++D +L  K    +   K ++D  L   ++ 
Sbjct: 241 QVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK-KMDVVLATMLMH 299

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G+   G+  KA+         G++P   TY  +I      G T E   +  ++ E GL P
Sbjct: 300 GYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLP 359

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T  +N ++KG ++    KDA  ++  +  +GV PD  TY  LI       +   A  + 
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M+ +  KP+   Y  +L GY ++G      ++  EM   G  P+   Y  ++  + K 
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
               +A A  + M   G+     T+N LI+  +   R    +E+ +     G+ P T TY
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +IN   +         +   MR +G+ PN+VTYT+ +D Y           C     D
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY-----------CRTNCCD 587

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL- 632
            AV     +R DG++P   A N+ I+ F +    + A   L  + ++GL PDV  Y +  
Sbjct: 588 LAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647

Query: 633 -----MKALIRVDKFH 643
                +K +    KF+
Sbjct: 648 TGYKNLKMMAEASKFY 663



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 204/430 (47%), Gaps = 15/430 (3%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL L  +MR  G + D   Y +VI++  R      ++  +L+ E+    ++ D ++    
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAV--RLFDEMAGAGVKPDERVYAIT 226

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE-LKESG 330
           I G  K  DA +A++ LG  +  G  P   TY++V+  L    R  EA  + ++ L  +G
Sbjct: 227 ISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATG 286

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
            K        L+ GY   G +  A  +  E+   GV P   TY +LI      G  +   
Sbjct: 287 KKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETY 346

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + ++M      P+++ ++ ++ G      W+    +LK +  +GV PD   Y  +I   
Sbjct: 347 KLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWL 405

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K+  LH A+  +D+M   G++P  +T+++L+  + + GR D A +L+ EM ++G+ P  
Sbjct: 406 CKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNE 465

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY  ++    +++ +++   LL  MR  G+     TY  L++      R  +  E L+ 
Sbjct: 466 VTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLK- 524

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
                    R + ++G  P+ +  NS+IN F +      AF + + M++ G+ P++VTYT
Sbjct: 525 ---------RFL-SEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574

Query: 631 TLMKALIRVD 640
           + +    R +
Sbjct: 575 SFIDGYCRTN 584



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 209/500 (41%), Gaps = 36/500 (7%)

Query: 164 LLYSILIHA------LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           +L ++L+H       +G++  L++  ++S     T +TY  LI  C      ++   L  
Sbjct: 292 VLATMLMHGYCLNGEVGKALDLFDE-VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCR 350

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +M + G       ++LVI+ L R  +   ++ L KL  +     +   G L++       
Sbjct: 351 QMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVPDVFTYGCLIH----WLC 406

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K     +A+      +  G+ P   TY +++      GR  EA  ++ E+ + G  P   
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEV 466

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+KGY+K     +A  +++EM ++GV   ++TY++LI+      R      +LK  
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P +  Y+ I+ G+   G     F + ++M+  G+ P+   Y   ID + + NC 
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+     +  +GI+PD   +N  ID   K G   RA      + + G  P  T YN  
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           +      +   +  +   +M  Q ++ +   YTTL+D + + G    A+E          
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 567 --------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                         C  G  D A      MR   + P+ +  N LINA   D +  EAF 
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 613 VLQYMKENGLKPDVVTYTTL 632
           +   M  +G+ PD  TY  L
Sbjct: 767 LHDEMLSSGVVPDDTTYDIL 786



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 23/363 (6%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           + +GV    K+ T   V TAL  S    +A  +F+E++  G     K Y+ +++  V+ G
Sbjct: 142 VTRGVVPDAKSRTDLLVTTALGASA--ADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
              DA  +  EM  +GV PDE  Y++ I         + A  VL +M  +  +P    YS
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 410 RI---LAGYRDRGEWQRTFQVLKE--MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            +   L   R   E  R    LK+  + ++G + D     +++  +     +  A+  FD
Sbjct: 260 SVVDVLVKVRRMDEALR----LKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFD 315

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            ++S+G+ P  +T+  LI      G  D   +L  +M E+G  P T  +N++I  L   +
Sbjct: 316 EVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDK 375

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           RW+D   LL  +   G+ P+V TY  L+    +  +             +AVN +  M+ 
Sbjct: 376 RWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLH-----------EAVNLWDKMKE 423

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G+KPS +  +SL+  + E  R  EA  +   M + G  P+ VTYTTLMK  I+   F  
Sbjct: 424 AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDN 483

Query: 645 VFS 647
            ++
Sbjct: 484 AYA 486


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 214/451 (47%), Gaps = 15/451 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L+    R D +E    L   M   G   D   YS  +++  +    D++  +K+++E+
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAA--KKVFEEM 271

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                 ++    N +I G  ++G   +A  F       GLSP   TY A++  L   GR 
Sbjct: 272 RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRL 331

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA+A+ +E+  SGLKP    Y  L+ G++K G   +A  +++EM  +GV P++  Y  L
Sbjct: 332 KEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNL 391

Query: 377 IDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           I      G+   A  +L EM +V H +P++F Y  ++ G+    +    F++L EM++SG
Sbjct: 392 IRGLCKIGQLGRASKLLNEMIKVGH-RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSG 450

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+ + Y +MI+   +      A    + M+SEG++P+   +  LI  H K G    A 
Sbjct: 451 ILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLAC 510

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E  E M +    P    YN +I  L    R E+ +     ++ +GL+P+  TY+ L+  Y
Sbjct: 511 ESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 570

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++   + A + L+    Q +N+       GLKP+      L+  + +     +  ++LQ
Sbjct: 571 CKTRNLEKADQLLQ----QMLNS-------GLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            M  +G KPD   Y  +++ L R +     F
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 179/386 (46%), Gaps = 24/386 (6%)

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           +  G  +G G+ P   TY+  + A   +     A+ VFEE++          YN ++ G 
Sbjct: 231 KLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 290

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            + G +++A     EM   G+ PD  TY  L++     GR + A+ +L EM  S  KPN 
Sbjct: 291 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNV 350

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y+ ++ G+   G+    F +L EM S+GV+P+   Y+ +I    K   L  A    + 
Sbjct: 351 VVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+  G  PDT T++ L+  HF+    D A EL  EM+  G  P   TY IMIN L +   
Sbjct: 411 MIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---------------- 569
            ++   LL  M ++GL PN   Y  L+  + + G    A E LE                
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530

Query: 570 ---GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
              GLS     ++A   +  ++  GL P     + LI+ + + +   +A  +LQ M  +G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFS 647
           LKP+  TYT L++   + +   KV S
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSS 616



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 218/495 (44%), Gaps = 50/495 (10%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           +  +TYN +IS   R+  +E+A     +M   G   D   Y  ++  L +  ++  +  +
Sbjct: 278 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEA--K 335

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            L  E+ C  ++ +  +   ++ GF K G A++A   L      G+ P    Y  +I  L
Sbjct: 336 ALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF-VVSEMERSGVLPD 369
              G+   A  +  E+ + G +P T  Y+ L++G+ +  Y KD  F +++EM  SG+LP+
Sbjct: 396 CKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH-YDKDGAFELLNEMRNSGILPN 454

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            +TY ++I+     G  + A  +L+EM     KPN+F+Y+ ++ G+   G      + L+
Sbjct: 455 AYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLE 514

Query: 430 EMKSSGVEPDTHFYNVMI---DTFGK----------------------YNCLHHAMAA-- 462
            M  + V PD   YN +I    T G+                      Y+ L H      
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574

Query: 463 --------FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                     +ML+ G++P+  T+  L++ +FK   +++   + + M   G  P    Y 
Sbjct: 575 NLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYG 634

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+I  L   E  E    +L  +   GL+P++  Y++L+    +    + A+    GL D+
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV----GLLDE 690

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                  M  +GL+P  +  N+LI+ F      + A  V   +   GL P+ VTYT L+ 
Sbjct: 691 -------MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALID 743

Query: 635 ALIRVDKFHKVFSSY 649
              +       F  Y
Sbjct: 744 GNCKNGDITDAFDLY 758



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 248/579 (42%), Gaps = 55/579 (9%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKN 135
            L    + +  L+N L +    + A AL      L+ +     +    V A L    +K 
Sbjct: 310 GLSPDAFTYGALMNGLCKGGRLKEAKAL------LDEMSCSGLKPNVVVYATLVDGFMKE 363

Query: 136 LCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT 195
             ++ +   L   + + +Q + + Y   +     I  LGR+ KL    ++    R    T
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE-MIKVGHRPDTFT 422

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT--NKIDSSLLQKLY 253
           Y+ L+    ++ D + A  L+++MR  G   +   Y ++I  L +   +K   +LL+++ 
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482

Query: 254 KE-----------------------IECDKIE--------LDGQLLNDVIVGFAKAGDAS 282
            E                       + C+ +E         D    N +I G +  G   
Sbjct: 483 SEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIE 542

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A  +    Q  GL P   TY+ +I     +    +A+ + +++  SGLKP    Y  LL
Sbjct: 543 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLL 602

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           +GY K    +    ++  M  SG  PD H Y ++I   + +   E A +VL E+E +   
Sbjct: 603 EGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLV 662

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  IYS +++G     + ++   +L EM   G+EP    YN +ID F +   +  A   
Sbjct: 663 PDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNV 722

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           FD +L++G+ P+ +T+  LID + K G    A +L+++M +RG  P    YN++     +
Sbjct: 723 FDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSD 782

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
               E    L   M  +G   +V  ++TLV  + + GR  +  + L  + D+ +      
Sbjct: 783 AADLEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREI------ 835

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEA---FAVLQYMK 618
                 P+   + ++I  FG+  +  EA   FA LQ  K
Sbjct: 836 -----VPNAQTVENVITEFGKAGKLCEAHRVFAELQQKK 869



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 18/384 (4%)

Query: 270 DVIVG-FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE--- 325
           DV+V  + K G    A + + M   +GL+P       ++  L    R    E V++    
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLL---RADAMELVWKLKGF 235

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++ +G+ P    Y+  L+ + K      A+ V  EM R     +E TY+++I     +G 
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A    +EM      P++F Y  ++ G    G  +    +L EM  SG++P+   Y  
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D F K      A    + M+S G++P+ I ++ LI    K G+  RA +L  EM + G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P T TY+ ++    +    +    LL  MR  G+LPN  TY  +++   Q+G      
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE----- 470

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                 S +A N    M ++GLKP+      LI    ++   + A   L+ M +  + PD
Sbjct: 471 ------SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPD 524

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           +  Y +L+K L  V +  +    Y
Sbjct: 525 LFCYNSLIKGLSTVGRIEEAEEYY 548


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 225/500 (45%), Gaps = 33/500 (6%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           SQ    + + Y  +I      +   +A  L  +M   G   D + ++ +I +L R   + 
Sbjct: 174 SQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQ 233

Query: 246 SS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            S  LL K+ K      +  +   +N  I GF +    ++A+R L    G GL+P   TY
Sbjct: 234 ESERLLNKVLKR----GVSPNLFTVNIFIQGFCQRAMLNEAIRLLD-GVGRGLTPDVITY 288

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L  + + +EAE    ++   G +P    YN+++ GY K+G +++A+ ++ +   
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PDE TY  LI+     G  + A  V  E      KPN  + + ++ G   +G   +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +++ EM  +G  PD   YN++I+   K  C+  A       +++G  PD  T+NTLID
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            + K  + D A E+ + M   G  P   TYN ++N L +  ++EDV      M  +G +P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNAFRVMRT-------DG----- 586
           N++TY  L + + ++ + ++A+  +E     GL+   VN   +M+        DG     
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588

Query: 587 --------LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                      +    N +INAF        A  +   M ENG  PD  TY  ++    +
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648

Query: 639 VDKFHKVFSSYLFFNIYKML 658
               +  + S+L   I K L
Sbjct: 649 TGNINSGY-SFLLVKIEKGL 667



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 35/505 (6%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNL 215
           LL  + I A+   GR  K+ EA  + +R        +  +YNA+++        ++A  +
Sbjct: 74  LLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKV 133

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
             +MR  G   D   +++ ++S  RT++  ++  ++L   +     E        VI GF
Sbjct: 134 YMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAA--RRLLNNMPSQGCESSAVAYCTVIGGF 191

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +     +A        G+G+ P    +  +I  L   G   E+E +  ++ + G+ P  
Sbjct: 192 YEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNL 251

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
              N  ++G+ +   L +A  ++  + R G+ PD  TY+ LI       +   A   L++
Sbjct: 252 FTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRK 310

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M     +P+ F Y+ I+ GY   G  Q   Q+L++    G  PD   Y  +I+   +   
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+  F+  + +G++P+ +  NTL+    + G   +A +L  EM E G  P   TYN+
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           +IN L +     D   L+ +  A+G LP+V T+ TL+D Y +  + D+AIE         
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G  +  +  F++M   G  P+ +  N L  +F + ++  EA 
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL 636
            +++ M+  GL PDVV + TLMK  
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGF 575



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 157/363 (43%), Gaps = 25/363 (6%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y   +      G+  EA  VFE +     +P  ++YNA++   V+  Y   A  V   
Sbjct: 77  GVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMR 136

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G++PD +T+++ + ++    R  +AR +L  M     + ++  Y  ++ G+ +   
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +EM   G+ PD   +N +I T  +   +  +    +++L  G+ P+  T N 
Sbjct: 197 RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNI 256

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            I    +    + A  L + +  RG  P   TYN +I  L +  +  + +  L  M  +G
Sbjct: 257 FIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAV 576
             P+  TY +++D Y + G   +A +                        C +G  D+A+
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N F      GLKP+ +  N+L+    +     +A  ++  M ENG  PD+ TY  ++  L
Sbjct: 376 NVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGL 435

Query: 637 IRV 639
            ++
Sbjct: 436 CKI 438



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 163/355 (45%), Gaps = 5/355 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY +LI+   ++ D+++A+N+ ++  + G   + +  + +++ L++   I  +L  KL  
Sbjct: 357 TYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQAL--KLMN 414

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+  +    D    N VI G  K G  S A   +  A   G  P   T+  +I       
Sbjct: 415 EMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL 474

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +   A  + + +   G+ P    YN++L G  K G  +D       M   G +P+  TY+
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L +++  A + E A  +++EM+     P+   +  ++ G+ D G+    +Q+ K +   
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594

Query: 435 -GVEPDTHFYNVMIDTF-GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
                    YN+MI+ F GK N ++ A   F++M   G  PD+ T+  +ID   K G  +
Sbjct: 595 YKFSHTIATYNIMINAFAGKLN-MNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNIN 653

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
                     E+G  P  TT+  ++N L  + R  +   ++  M  +G++P VV 
Sbjct: 654 SGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 50/305 (16%)

Query: 372 TYSLLIDAYANAGRWESARIVLKE--MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           TY  +I+     G +E+   VL E  M + +      +Y   +  Y  +G+ Q    V +
Sbjct: 42  TYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEG-VYIGAMRNYGRKGKIQEAVDVFE 100

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID------ 483
            M     EP    YN +++   +Y     A   + RM  +GI PD  T+   +       
Sbjct: 101 RMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTS 160

Query: 484 ------------------------CHFKCGRYD-----RAEELFEEMQERGYFPCTTTYN 514
                                   C    G Y+      A ELFEEM   G  P    +N
Sbjct: 161 RPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFN 220

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I+ L  +   ++ +RLL  +  +G+ PN+ T    +  + Q    ++AI  L+G+   
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-- 278

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                      GL P  +  N+LI    ++ +  EA   L+ M   G +PD  TY +++ 
Sbjct: 279 ----------RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328

Query: 635 ALIRV 639
              ++
Sbjct: 329 GYCKL 333


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 24/386 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            + G    A+R L +    G +  +     V++A+   G   E   +  +L   G +P  
Sbjct: 154 CRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDI 213

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMER----------SGVLPDEHTYSLLIDAYANAGR 385
            +YNA+LKG        D E ++ EM R           G  PD   Y+ +ID     G 
Sbjct: 214 VSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 273

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A  +L  M     KPN   Y+ +L G      W+    +L EM       D   +N+
Sbjct: 274 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 333

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D F +   +   +   ++ML  G  PD IT+ T+I+   K G  D A  L + M   G
Sbjct: 334 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 393

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P T +Y I++  L   ERW D + L+ +M  QG LPN VT+ TL++            
Sbjct: 394 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFM---------- 443

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C +GL++QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L  M   G+ P+
Sbjct: 444 -CKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502

Query: 626 VVTYTTLMKALI---RVDKFHKVFSS 648
            + Y+++  AL    R DK  ++F S
Sbjct: 503 TIIYSSMASALSREGRTDKIIQMFDS 528



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 199/456 (43%), Gaps = 25/456 (5%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           TP   + ++ A  R      A+  +  +   G   D  N +LV+ ++     +D  +  +
Sbjct: 142 TPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGV--E 199

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKA---GDASKAM-------RFLGMAQGVGLSPKTA 301
           L +++     E D    N V+ G   A    D  + M         L      G +P   
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLR 259

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            YA +I  +   G    A  +   +   GLKP    YN +LKG       ++AE +++EM
Sbjct: 260 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            +     D+ T+++L+D +   G  +    +L++M      P+   Y+ ++ G+   G  
Sbjct: 320 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 379

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +LK M + G +P+T  Y +++    +      A      M+ +G  P+ +T+NTL
Sbjct: 380 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTL 439

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+   K G  ++A EL ++M   G  P   +Y+ +I+ LG+  + E+   LL  M  +G+
Sbjct: 440 INFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL-NSLINA 600
            PN + Y+++     + GR D  I+  + + D  V             S+ AL N++I++
Sbjct: 500 TPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVR------------SDAALYNAVISS 547

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             +      A     YM  NG  P+  TYT L++ L
Sbjct: 548 LCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 159/363 (43%), Gaps = 8/363 (2%)

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           +++EA         TP    Y  +I    ++   E A +++S+M   G   + + Y+ V+
Sbjct: 241 RVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 300

Query: 236 QSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           + L    + + +  LL ++++E +C    LD    N ++  F + G   + +  L     
Sbjct: 301 KGLCSAERWEEAEDLLAEMFQE-DC---PLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 356

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P   TY  VI      G   EA  + + +   G KP T +Y  +LKG  +     D
Sbjct: 357 HGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVD 416

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A+ ++S M + G LP+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ 
Sbjct: 417 AQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVID 476

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    G+ +   ++L  M + G+ P+T  Y+ M     +       +  FD +    +  
Sbjct: 477 GLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRS 536

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D   +N +I    K    DRA + F  M   G  P  +TY I+I  L  +    + + LL
Sbjct: 537 DAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596

Query: 534 GNM 536
             +
Sbjct: 597 SEL 599



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 177/423 (41%), Gaps = 47/423 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYK 254
           N ++SA      +++ + L+ K+   G   D ++Y+ V++ L    + D    L+ ++ +
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241

Query: 255 EIEC------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             E            D ++   +I G  K G    A   L      GL P    Y  V+ 
Sbjct: 242 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301

Query: 309 ALSNSGRTIEAE-----------------------------------AVFEELKESGLKP 333
            L ++ R  EAE                                    + E++ E G  P
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  ++ G+ K G + +A  ++  M   G  P+  +Y++++     A RW  A+ ++
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M      PN   ++ ++     +G  ++  ++LK+M  +G  PD   Y+ +ID  GK 
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 481

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A+   + M+++GI P+TI ++++     + GR D+  ++F+ +Q+         Y
Sbjct: 482 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 541

Query: 514 NIMINLLGEQERWEDVKRL--LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           N +I+ L   +RWE  + +     M + G +PN  TYT L+      G   +A + L  L
Sbjct: 542 NAVISSL--CKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599

Query: 572 SDQ 574
             +
Sbjct: 600 CSR 602


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 203/460 (44%), Gaps = 15/460 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++        +  AL ++ +M   G       Y +++++  R+    +S+  ++ +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV--RVLE 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +      LD    N V+    + G   +A+  L      G      +Y AV+  L  + 
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  + E + +E+      P    +N L+    + G  +    V+++M   G  PD   Y+
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +ID     G  E A  +L  M     KPN   Y+ +L G      W+   ++L EM   
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
               D   +N+++D F +   +   +   ++MLS G  PD IT+ T+I+   K G  D A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L + M   G  P T +Y I++  L    RW D + L+  M  QG  PN VT+ TL++ 
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +GL +QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L
Sbjct: 471 L-----------CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             M   G+ P+ + Y+++  AL R  + +KV    +F NI
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQ--MFDNI 557



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 207/468 (44%), Gaps = 26/468 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  Y+ ++ A  R+     ++ ++  M   G   D  N +LV+ ++     +D ++   L
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV--GL 203

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +++     E D    N V+ G   A         +     V  +P   T+  +I  L  
Sbjct: 204 LRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCR 263

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G       V  ++ E G  P  + Y  ++ G  K G+L+ A  +++ M   G+ P+   
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ ++    +A RW+ A  +L EM       +   ++ ++  +   G   R  ++L++M 
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G  PD   Y  +I+ F K   +  A+     M S G +P+T+++  ++      GR+ 
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEEL  +M ++G  P   T+N +IN L ++   E    LL  M   G  P++++Y+T++
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 553 DIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLK 588
           D  G++G+ ++A+E L                        EG  ++ +  F  ++   ++
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +  N++I++  +      A     YM  NG  P+  TYT L+K L
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/542 (21%), Positives = 213/542 (39%), Gaps = 59/542 (10%)

Query: 124 VPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           VP P     +  +++ LC+     D A  V+  +     C     +Y +++ A  RS   
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIAD-ALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGF 162

Query: 180 YEAFLLSQRQRLTPLTY-----NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
             +  + +       T      N +++A      +++A+ L+ K+   G   D ++Y+ V
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           ++ L    +     +++L  E+       +    N +I    + G   +    L      
Sbjct: 223 LKGLCMAKRWGD--VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P    YA +I  +   G    A  +   +   GLKP    YN +LKG       K+A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 355 EFVVSEMERS-----------------------------------GVLPDEHTYSLLIDA 379
           E ++SEM +                                    G +PD  TY+ +I+ 
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           +   G  + A ++LK M     KPN+  Y+ +L G    G W    +++ +M   G  P+
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ + A EL  
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M  +G  P T  Y+ +   L  + R   V ++  N++   +  + V Y  ++       
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL---- 576

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C    +D+A++ F  M ++G  P+      LI     +    EA  +L  +  
Sbjct: 577 -------CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 620 NG 621
            G
Sbjct: 630 RG 631



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 184/419 (43%), Gaps = 9/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++++LK LC +    D+   +   ++    C    + ++ LI  L R+   E+++E    
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 TP    Y  +I    +   LE A  ++++M   G   + + Y+ V++ L    +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  ++L  E+      LD    N ++  F + G   + +  L      G  P   TY
Sbjct: 337 WKEA--EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI      G   EA  + + +   G KP T +Y  +LKG    G   DAE ++S+M +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+ + 
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N +I 
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    DRA + F  M   G  P  +TY ++I  L  +   ++ + LL  + ++G L
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 176/396 (44%), Gaps = 6/396 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI    RN   E+   ++++M + G   D   Y+ +I  + +   ++ +   ++ 
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA--NEIL 309

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +    ++ +    N V+ G   A    +A   L             T+  ++     +
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G       + E++   G  P    Y  ++ G+ K G + +A  ++  M   G  P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++++    +AGRW  A  ++ +M      PN   ++ ++     +G  ++  ++LK+M  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PD   Y+ +ID  GK      A+   + M+++GI P+TI ++++     + GR ++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL--LGNMRAQGLLPNVVTYTTL 551
             ++F+ +++         YN +I+ L   +RWE  + +     M + G +PN  TYT L
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSL--CKRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +      G   +A E L  L  +      +MR  G+
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 203/460 (44%), Gaps = 15/460 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++        +  AL ++ +M   G       Y +++++  R+    +S+  ++ +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV--RVLE 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +      LD    N V+    + G   +A+  L      G      +Y AV+  L  + 
Sbjct: 171 AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAK 230

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  + E + +E+      P    +N L+    + G  +    V+++M   G  PD   Y+
Sbjct: 231 RWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYA 290

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +ID     G  E A  +L  M     KPN   Y+ +L G      W+   ++L EM   
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
               D   +N+++D F +   +   +   ++MLS G  PD IT+ T+I+   K G  D A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L + M   G  P T +Y I++  L    RW D + L+  M  QG  PN VT+ TL++ 
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINF 470

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +GL +QA+   + M  +G  P  ++ +++I+  G+  +  EA  +L
Sbjct: 471 L-----------CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
             M   G+ P+ + Y+++  AL R  + +KV    +F NI
Sbjct: 520 NVMVNKGISPNTIIYSSIACALSREGRVNKVIQ--MFDNI 557



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 207/468 (44%), Gaps = 26/468 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  Y+ ++ A  R+     ++ ++  M   G   D  N +LV+ ++     +D ++   L
Sbjct: 146 PPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAV--GL 203

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +++     E D    N V+ G   A         +     V  +P   T+  +I  L  
Sbjct: 204 LRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCR 263

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G       V  ++ E G  P  + Y  ++ G  K G+L+ A  +++ M   G+ P+   
Sbjct: 264 NGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVC 323

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ ++    +A RW+ A  +L EM       +   ++ ++  +   G   R  ++L++M 
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 383

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G  PD   Y  +I+ F K   +  A+     M S G +P+T+++  ++      GR+ 
Sbjct: 384 SHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWV 443

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AEEL  +M ++G  P   T+N +IN L ++   E    LL  M   G  P++++Y+T++
Sbjct: 444 DAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 503

Query: 553 DIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLK 588
           D  G++G+ ++A+E L                        EG  ++ +  F  ++   ++
Sbjct: 504 DGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIR 563

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              +  N++I++  +      A     YM  NG  P+  TYT L+K L
Sbjct: 564 SDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/542 (21%), Positives = 213/542 (39%), Gaps = 59/542 (10%)

Query: 124 VPAP----LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           VP P     +  +++ LC+     D A  V+  +     C     +Y +++ A  RS   
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIAD-ALEVLDEMSFKG-CAPIPPMYHVILEAACRSGGF 162

Query: 180 YEAFLLSQRQRLTPLTY-----NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
             +  + +       T      N +++A      +++A+ L+ K+   G   D ++Y+ V
Sbjct: 163 RNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAV 222

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           ++ L    +     +++L  E+       +    N +I    + G   +    L      
Sbjct: 223 LKGLCMAKRWGD--VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G +P    YA +I  +   G    A  +   +   GLKP    YN +LKG       K+A
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEA 340

Query: 355 EFVVSEMERS-----------------------------------GVLPDEHTYSLLIDA 379
           E ++SEM +                                    G +PD  TY+ +I+ 
Sbjct: 341 EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVING 400

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           +   G  + A ++LK M     KPN+  Y+ +L G    G W    +++ +M   G  P+
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              +N +I+   K   +  A+    +ML  G  PD I+++T+ID   K G+ + A EL  
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M  +G  P T  Y+ +   L  + R   V ++  N++   +  + V Y  ++       
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL---- 576

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C    +D+A++ F  M ++G  P+      LI     +    EA  +L  +  
Sbjct: 577 -------CKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 620 NG 621
            G
Sbjct: 630 RG 631



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 184/419 (43%), Gaps = 9/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLL 185
           ++++LK LC +    D+   +   ++    C    + ++ LI  L R+   E+++E    
Sbjct: 219 YNAVLKGLCMAKRWGDVEELMDEMVRVD--CAPNIVTFNTLIGYLCRNGLFERVHEVLAQ 276

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 TP    Y  +I    +   LE A  ++++M   G   + + Y+ V++ L    +
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  ++L  E+      LD    N ++  F + G   + +  L      G  P   TY
Sbjct: 337 WKEA--EELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI      G   EA  + + +   G KP T +Y  +LKG    G   DAE ++S+M +
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P+  T++ LI+     G  E A  +LK+M V+   P+   YS ++ G    G+ + 
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  M + G+ P+T  Y+ +     +   ++  +  FD +    I  D + +N +I 
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    DRA + F  M   G  P  +TY ++I  L  +   ++ + LL  + ++G L
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 176/396 (44%), Gaps = 6/396 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI    RN   E+   ++++M + G   D   Y+ +I  + +   ++ +   ++ 
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA--NEIL 309

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +    ++ +    N V+ G   A    +A   L             T+  ++     +
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G       + E++   G  P    Y  ++ G+ K G + +A  ++  M   G  P+  +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++++    +AGRW  A  ++ +M      PN   ++ ++     +G  ++  ++LK+M  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +G  PD   Y+ +ID  GK      A+   + M+++GI P+TI ++++     + GR ++
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL--LGNMRAQGLLPNVVTYTTL 551
             ++F+ +++         YN +I+ L   +RWE  + +     M + G +PN  TYT L
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSL--CKRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +      G   +A E L  L  +      +MR  G+
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 196/427 (45%), Gaps = 16/427 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y  ++       ++++++  KL  E+    +E +  +   VI      G  S A+R
Sbjct: 286 DVVTYGTMVHGYCVRGELENAV--KLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALR 343

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G++     +  VI+   + G    A  +FEE+++ GL      + AL+ G  
Sbjct: 344 VLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLC 403

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G LK+A+ V+ EM   G+  D  TY++LID Y   G    A  V  EM      PN  
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ +  G   +G+ +   ++L EM + G+E + + YN +I+   K+  L  AM     M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            + G   D  T+ TLID   K G +DRA  + +EM ++G  P   TYN+++N      R 
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E  K+LL  M  + + PNVVTY +L+  Y          E  +G+  Q V          
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV---------- 633

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P+    N LI    + +   EA    Q M E GL+    +Y+ L++ L +  KF +  
Sbjct: 634 -APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE-- 690

Query: 647 SSYLFFN 653
            + +FF+
Sbjct: 691 -ARVFFD 696



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 224/499 (44%), Gaps = 22/499 (4%)

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP- 193
           N   S   +D A A+   L   N+C      ++IL+ AL  + +L +A          P 
Sbjct: 232 NAVLSRLPLDEAIALFRELPDKNVCS-----HNILLKALLSAGRLKDACQHFDEMSSPPD 286

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +TY  ++       +LE A+ L+ +M   G   +   Y+ VI  L    ++  +L  ++
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDAL--RV 344

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +++    + LD  +   VI GF   GD + A R     Q  GL+    T+ A+I  L  
Sbjct: 345 LEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCR 404

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G   EA+ V +E+ + GL      Y  L+ GY K G + +A  V +EM    V P+  T
Sbjct: 405 AGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVT 464

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L D     G   +A  +L EM     + N + Y+ ++ G    G  ++  +++ EM+
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEME 524

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           ++G   D + Y  +IDT  K      A      ML +GI+P   T+N L++     GR +
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             ++L E M E+   P   TYN ++      +  +    +   M +Q + PN  TY  L+
Sbjct: 585 GGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             + ++    +A+   + + ++           GL+ +  + ++LI    + ++ +EA  
Sbjct: 645 KGHCKARNMKEALYFHQEMIEK-----------GLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 613 VLQYMKENGL--KPDVVTY 629
               M+  GL  +PDV ++
Sbjct: 694 FFDKMRNEGLTAEPDVYSF 712



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 181/396 (45%), Gaps = 6/396 (1%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  + +  +IS      DL  A  L  +M++ G   D + ++ +I  L R  ++  +   
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEA--D 412

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ +E+    +++D      +I G+ K G+  +A R      G  ++P   TY A+   L
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G    A  +  E+   GL+     YN+L+ G  K G L+ A  +++EME +G   D 
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           +TY+ LID    +G ++ A  +L+EM     KP+   Y+ ++ G+   G  +   ++L+ 
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M    V P+   YN ++  +     +      +  M S+ + P+  T+N LI  H K   
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A    +EM E+G     ++Y+ +I LL +++++ + +     MR +GL      Y+ 
Sbjct: 653 MKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF 712

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            +DI       +D +E    L D+ V A  V    G
Sbjct: 713 YMDISFN----EDNLESTITLCDELVEASHVKSKAG 744



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 160/350 (45%), Gaps = 22/350 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLSP   +  AV++ L       EA A+F EL +  +     ++N LLK  +  G LKDA
Sbjct: 223 GLSPSPESCNAVLSRLPLD----EAIALFRELPDKNVC----SHNILLKALLSAGRLKDA 274

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                EM      PD  TY  ++  Y   G  E+A  +L EM     + N+ +Y+ ++A 
Sbjct: 275 CQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIAL 331

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             ++G+     +VL++M   GV  D   +  +I  F     L  A   F+ M   G+  D
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T   LI+   + G    A+ + +EM ++G      TY ++I+   ++    +  R+  
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + PNVVTYT L D   + G    A E L  + ++           GL+ +    
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK-----------GLELNVYTY 500

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           NSLIN   +     +A  ++  M+  G + DV TYTTL+  L +  +F +
Sbjct: 501 NSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 241/526 (45%), Gaps = 70/526 (13%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMS 217
           +++YSI++  L +++K+++A  L  + R +      +TYN L++   ++  L+ A  L+ 
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + +DG+    I Y  +I  L R  + + +     Y+++  + I+ D  L   +I G ++
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEA--HMWYQKMLRENIKPDVMLYTIMIRGLSQ 350

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++A+  LG     GL P T  Y A+I    + G   EAE++  E+ +    P    
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ L+ G  K G +  A+ +  EME+ G LP   T++ LI+    A R E AR++  +ME
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 398 VSHAKPNSFI--------------YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           +   KP+ F+                 ++    + G   + +++L ++  SGV PD   Y
Sbjct: 471 IVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I+ F K+  ++ A   F  M  +G  PD++T+ TLID  ++ GR + A E+FE+M +
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 504 RGYFPCTTTY-----------NIMINL------LGEQERWEDVK-RLLGNMRAQGLLPNV 545
           +G  P ++TY           NI + L      L +   WED K R++        L   
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTA 649

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +     +DI  +S  FD                        L P  + L  L+ A    +
Sbjct: 650 IRRLLEMDI--KSKNFD------------------------LAPYTIFLIGLVQA----K 679

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLF 651
           RD EAFA+   +K+  +     +   L+  L  V+        +LF
Sbjct: 680 RDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLF 725



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 193/450 (42%), Gaps = 8/450 (1%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           ++ LI A +     EKA+   S MR      D   ++L++  L R      +L   +Y +
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLAL--AVYNQ 188

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D      +I G  K      A+         G+ P    Y+ V++ L  + +
Sbjct: 189 MLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKK 248

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A+ +F +++ SG       YN LL G+ K GYL DA  ++  + + G +     Y  
Sbjct: 249 IFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGC 308

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+    A R+E A +  ++M   + KP+  +Y+ ++ G    G       +L EM   G
Sbjct: 309 LINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERG 368

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PDT  YN +I  F     L  A +    +      P+  T++ LI    K G  ++A+
Sbjct: 369 LRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQ 428

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM---RAQGLLPNVVTYTTLV 552
            +F+EM++ G  P   T+N +IN L +  R E+ + L   M   R   L   +   T  V
Sbjct: 429 HIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKV 488

Query: 553 -DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
            DI       +    C  G+  +A      +   G+ P     N LIN F +      AF
Sbjct: 489 FDIASLQVMMERL--CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAF 546

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
            + + M+  G  PD VTY TL+  L R  +
Sbjct: 547 KLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 160/356 (44%), Gaps = 2/356 (0%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           L+P   TY  +I  L  + +T +A  +F+E+ + G+ P    Y+ +L G  +   + DA+
Sbjct: 194 LNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQ 253

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            + S+M  SG   D  TY++L++ +  +G  + A  +L+ +           Y  ++ G 
Sbjct: 254 RLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGL 313

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                ++      ++M    ++PD   Y +MI    +   +  A+     M   G+ PDT
Sbjct: 314 FRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDT 373

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           I +N LI      G  D AE L  E+ +   FP   TY+I+I  + +       + +   
Sbjct: 374 ICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKE 433

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL-KPSNLA- 593
           M   G LP+VVT+ +L++   ++ R ++A      +      +  +  + G  K  ++A 
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           L  ++    E     +A+ +L  + ++G+ PD+ TY  L+    +    +  F  +
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLF 549



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 150/364 (41%), Gaps = 60/364 (16%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMG----------YLKD------------------ 353
           V +ELK S +K  ++A++ L++ Y + G           ++D                  
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174

Query: 354 -------AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
                  A  V ++M +  + PD  TY +LI       + + A ++  EM      PN  
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           IYS +L+G     +     ++  +M++SG   D   YNV+++ F K   L  A      +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +G     I +  LI+  F+  RY+ A   +++M      P    Y IMI  L ++ R 
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA----IE---------------- 566
            +   LLG M  +GL P+ + Y  L+  +   G  D+A    +E                
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C  GL ++A + F+ M   G  PS +  NSLIN   +  R  EA  +L Y  E   
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVR 473

Query: 623 KPDV 626
           KP +
Sbjct: 474 KPSL 477



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/230 (19%), Positives = 93/230 (40%), Gaps = 24/230 (10%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +++I    K N           + +  I+  +  ++ LI+ + + G  ++A E F  M++
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P    +N++++ L  +E +     +   M    L P+VVTY  L+    ++ +  D
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 564 AIECLEGLSDQAV------------------------NAFRVMRTDGLKPSNLALNSLIN 599
           A+   + ++D+ +                          F  MR  G     +  N L+N
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            F +     +AF +LQ + ++G    V+ Y  L+  L R  ++ +    Y
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 207/465 (44%), Gaps = 26/465 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N +I+   R   L  A +++ +  + G+  + I +S +I       ++  ++   L  
Sbjct: 106 TMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV--ALVD 163

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +   K   +   +N +I G    G  ++A+  +      G      TY  V+  +  SG
Sbjct: 164 RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSG 223

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
            T  A  +F +++E  +K     Y+ ++    K G L DA  + +EME  G+  D   YS
Sbjct: 224 NTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYS 283

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I    N GRW+    +L+EM   +  PN   +S ++  +   G+     ++  EM + 
Sbjct: 284 SIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVAR 343

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PDT  Y+ +ID F K N L  A    D M+S+G EP+ +T++ LI+ + K  R D  
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF E+  +G    T TYN ++    +  +    K L   M ++G+ P+VVTY  L+D 
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463

Query: 555 YGQSGRFDDAIECLEGLS------------------------DQAVNAFRVMRTDGLKPS 590
              +G    A+E  E +                         D A + F  +   G+KP 
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            L  N +I    +    +EA  + + MKE+G  P   TY  L++A
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 215/483 (44%), Gaps = 20/483 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           +S LI+      ++ EA  L  R      R   +T N LI+       + +AL L+ +M 
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + I Y  V+  + ++   +++L   L++++E   I+      + VI    K G+
Sbjct: 202 KYGCEANEITYGPVLNRMCKSG--NTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+      +  G+      Y+++I  L N GR  +   +  E+    + P    ++A
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+  +VK G L +A+ + +EM   G+ PD  TYS LID +    R   A  +L  M    
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +PN   YS ++  Y          ++  E+ S G+  DT  YN ++  F +   L+ A 
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+S G+ P  +T+  L+D     G   +A E+FE+MQ+         YNI+I+ +
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               + +D   L  ++  +G+ P+V+TY  ++              C +G   +A   FR
Sbjct: 500 CNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGL-----------CKKGSLSEADMLFR 548

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--R 638
            M+ DG  PS+   N LI A         +  +++ MK  G   D  T   ++  L   R
Sbjct: 549 KMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608

Query: 639 VDK 641
           +DK
Sbjct: 609 LDK 611



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 219/493 (44%), Gaps = 69/493 (13%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           + +A++L   M Q       I++S +  ++ R  + D  L+    KE++ + IE +   +
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYD--LVLGFCKEMDLNGIEHNMYTM 107

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F +      A   +G A   G  P T T++ +I      GR  EA A+ + + E
Sbjct: 108 NIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE 167

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT---------------- 372
              +P     N L+ G    G + +A  ++  M + G   +E T                
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227

Query: 373 -------------------YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
                              YS++ID+    G  + A  +  EME+   K +   YS I+ 
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIG 287

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G  + G W    ++L+EM    + P+   ++ +ID F K   L  A   ++ M++ GI P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DTIT+++LID   K  R   A ++ + M  +G  P   TY+I+IN   + +R ++  RL 
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------CLEGLSD- 573
             + ++GL+ + VTY TLV  + QSG+ + A E                    L+GL D 
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDN 467

Query: 574 ----QAVNAFRVMRTD----GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               +A+  F  M+      G+   N+ ++ + NA   D    +A+++   +   G+KPD
Sbjct: 468 GELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD----DAWSLFCSLSVKGVKPD 523

Query: 626 VVTYTTLMKALIR 638
           V+TY  ++  L +
Sbjct: 524 VLTYNVMIGGLCK 536



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 168/374 (44%), Gaps = 23/374 (6%)

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           D+++GF K  D +            G+     T   +I       + + A +V     + 
Sbjct: 86  DLVLGFCKEMDLN------------GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKF 133

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P T  ++ L+ G+   G + +A  +V  M      P+  T + LI+     GR   A
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            +++  M     + N   Y  +L      G       + ++M+   ++     Y+++ID+
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   L  A++ F+ M  +GI+ D + ++++I      GR+D   ++  EM  R   P 
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             T++ +I++  ++ +  + K L   M A+G+ P+ +TY++L+D + +  R  +A + L+
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLD 373

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                      +M + G +P+ +  + LIN++ + +R      +   +   GL  D VTY
Sbjct: 374 -----------LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422

Query: 630 TTLMKALIRVDKFH 643
            TL++   +  K +
Sbjct: 423 NTLVQGFCQSGKLN 436



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 24/268 (8%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+   +S++ +    R E+       KEM  +G+E + +  N+MI+ F +   L  
Sbjct: 63  SRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLF 122

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A +   R L  G EP+TIT++TLI+     GR   A  L + M E  Y P   T N +IN
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
            L  + R  +   L+  M   G   N +TY  +++   +SG    A++            
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +G  D A++ F  M   G+K   +A +S+I     D R  +   +L
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
           + M    + P+VVT++ L+   ++  K 
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKL 330


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 202/441 (45%), Gaps = 48/441 (10%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+   + + ++ A  ++ +MR   +  D + Y+++I SL    K+D +L       
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL------- 209

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                 ++  QLL+D                           P   TY  +I A    G 
Sbjct: 210 ------KVLDQLLSD------------------------NCQPTVITYTILIEATMLEGG 239

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + +E+   GLKP    YN +++G  K G +  A  ++  +E  G  PD  +Y++
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+ A  N G+WE    ++ +M      PN   YS ++      G+ +    +LK MK  G
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PD + Y+ +I  F +   L  A+   + M+S+G  PD + +NT++    K G+ D+A 
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+F ++ E G  P +++YN M + L           ++  M + G+ P+ +TY +++   
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C EG+ D+A      MR+    PS +  N ++  F +  R  +A  VL 
Sbjct: 480 -----------CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLD 528

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M  NG +P+  TYT L++ +
Sbjct: 529 SMVGNGCRPNETTYTVLIEGI 549



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   +  ++ +A  +  R R    +P  +TYN +I +      L+ AL ++ ++ 
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            D      I Y+++I++      +D +L  KL  E+    ++ D    N +I G  K G 
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEAL--KLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +   +  G  P   +Y  ++ AL N G+  E E +  ++      P    Y+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    + G +++A  ++  M+  G+ PD ++Y  LI A+   GR + A   L+ M    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ +LA     G+  +  ++  ++   G  P++  YN M            A+
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M+S GI+PD IT+N++I C  + G  D+A EL  +M+   + P   TYNI++   
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            +  R ED   +L +M   G  PN  TYT L++  G +G   +A+E
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 560



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 174/395 (44%), Gaps = 25/395 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++G+  +++  L      G +P       +I          +A  V E L++ G +P  
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AYNAL+ G+ KM  + DA  V+  M      PD  TY+++I +  + G+ + A  VL +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +   + +P    Y+ ++      G      ++L EM S G++PD   YN +I    K   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A      +  +G EPD I++N L+      G+++  E+L  +M      P   TY+I
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           +I  L    + E+   LL  M+ +GL P+  +Y  L+  + + GR D AIE         
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G +DQA+  F  +   G  P++ + N++ +A         A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            ++  M  NG+ PD +TY +++  L R     K F
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +G +  +  +L+ M      P+  + ++++ G+       +  +V++ ++  G +PD   
Sbjct: 98  SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFA 156

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I+ F K N +  A    DRM S+   PDT+T+N +I      G+ D A ++ +++ 
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P   TY I+I     +   ++  +LL  M ++GL P++ TY T+  I G      
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTI--IRGM----- 269

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EG+ D+A    R +   G +P  ++ N L+ A     +  E   ++  M     
Sbjct: 270 ----CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
            P+VVTY+ L+  L R  K  +        N+ K++   G
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEA------MNLLKLMKEKG 359


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 225/477 (47%), Gaps = 31/477 (6%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK-LYKEIECDK 260
           AC R      A  + ++M++     + +  + +I +L R     S  L K ++ ++    
Sbjct: 151 ACNRP---HHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLG 207

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           ++++    N +I G       S+A+  +G  +     P   +Y  ++  L   G+  EA 
Sbjct: 208 VKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEAR 267

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +  ++K +GL P    +N L+ GY K+G+LK+A  V+  M ++ VLPD  TY++LI   
Sbjct: 268 DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G+ + A  +  EME     P+   Y+ ++ G  D     + F+++ +M+  GV+P+ 
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNA 387

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YNV++  + K   + +A     +M   G  PD +T+NTLI+ + K GR   A  + +E
Sbjct: 388 VTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDE 447

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M  +G    + T N +++ L  + + +D  +LL +   +G   + V+Y TL+  Y + G+
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507

Query: 561 FDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +A++                        C  G +DQ+++    +   GL P     N+
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           +I  +  + +  +AF     M +   KPD+ T   L++ L     +DK  K+F++++
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWI 624



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 225/535 (42%), Gaps = 54/535 (10%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-LTPL--TYNALISACARNDDLEKAL 213
           C+   + Y+ ++  L +  KL EA   LL  +   L P   T+N L+S   +   L++A 
Sbjct: 243 CFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAA 302

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++  M Q+    D   Y+++I  L +  KID +   +L  E+E  K+  D    N +I 
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF--RLKDEMENLKLLPDVVTYNTLIN 360

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G      + K    +   +G G+ P   TY  V+      G+   A     +++ESG  P
Sbjct: 361 GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 420

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV--------------------------- 366
               +N L+ GY K G L +A  ++ EM R G+                           
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 480

Query: 367 --------LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
                     DE +Y  LI  Y   G+   A  +  EM+     P+   Y+ ++ G    
Sbjct: 481 SSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHS 540

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  ++   L E+  SG+ PD   YN +I  + +   +  A    ++M+ +  +PD  T 
Sbjct: 541 GKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTC 600

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N L+      G  D+A +LF     +G      TYN +I+ L +++R+E+   LL  M  
Sbjct: 601 NILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK---------- 588
           + L P+  TY  ++     +GR  +A E +  + +Q     + +  +  K          
Sbjct: 661 KKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQE 720

Query: 589 --PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             P+++  +  IN      +  +A  ++Q   + G+     TY +LM+ LI+  K
Sbjct: 721 SDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 219/462 (47%), Gaps = 22/462 (4%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   ++Y  L+ A   +   ++A+ L+  MR  G   D + Y  +I+ L    ++D ++ 
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV- 170

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAV 306
            +L  E+    IE +  + + ++ G+ K+G   D  K   F+ M++  G+ P    Y  +
Sbjct: 171 -ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKV--FVEMSEK-GIEPDVVMYTGL 226

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I +L   G+  +A  V + +   GL+P    YN L+    K G +K+A  V+ +M   GV
Sbjct: 227 IDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH--AKPNSFIYSRILAGYRDRGEWQRT 424
            PD  TY+ LI   ++    + A  +L+EM       KPN   ++ ++ G  D G  ++ 
Sbjct: 287 APDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           FQV   M+ +G   +   YN++I    + + +  AM   D M S G+EPD+ T++ LI  
Sbjct: 347 FQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKG 406

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K  + DRAE+L   M++RG  P    Y  ++  + EQ   E  + L   M     L +
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-D 465

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           VV Y+T++    ++G    A E L+ + D+           GL P  +  + +IN F + 
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDE-----------GLTPDAVTYSIVINMFAKS 514

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
                A  VL+ M  +G  PDV  + +L++      + +KV 
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 201/458 (43%), Gaps = 45/458 (9%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYE---AFLLSQRQ---RLTPLTYNALISACARN 206
           L+ H  C    + Y++L+ AL  +++L +     L S R    R   +TY  LI      
Sbjct: 105 LEPHPACRPNAVSYTVLMRALC-ADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDA 163

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
            +++KA+ LM +M + G   + + YS ++Q   ++ + +   + K++ E+    IE D  
Sbjct: 164 AEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWED--VGKVFVEMSEKGIEPDVV 221

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           +   +I    K G A KA   + M    GL P   TY  +I  +   G   EA  V +++
Sbjct: 222 MYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLPDEHTYSLLIDAYANAG 384
            E G+ P    YN L+KG   +  + +A +++ EM R    V P+  T++ +I    + G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R   A  V   ME +    N   Y+ ++ G     + ++  +++ EM S G+EPD+  Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEP------------------------------- 473
           ++I  F K   +  A      M   GIEP                               
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN 461

Query: 474 ---DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
              D + ++T+I    K G    A+EL + + + G  P   TY+I+IN+  +    E   
Sbjct: 462 FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAAN 521

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            +L  M A G LP+V  + +L+  Y   G  +  +E +
Sbjct: 522 GVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI 559



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 157/355 (44%), Gaps = 19/355 (5%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELK---ESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +Y  V+TAL   G    A A+   +        +P   +Y  L++          A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M  +GV  D  TY  LI    +A   + A  ++ EM  S  +PN  +YS +L GY   
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G W+   +V  EM   G+EPD   Y  +ID+  K      A    D M+  G+EP+ +T+
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-R 537
           N LI+C  K G    A  + ++M E+G  P   TYN +I  L +    ++   LL  M R
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 538 AQGLL-PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            + ++ PNVVT+ +++      GR             QA     +M   G   + +  N 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRM-----------RQAFQVRAMMEETGCMVNLVTYNL 367

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
           LI       +  +A  ++  M   GL+PD  TY+ L+K   +   VD+   + S+
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 18/374 (4%)

Query: 269 NDVIVGFAKAGDASKA---MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           N V+    + G   +A   +R + +       P   +Y  ++ AL       +A  +   
Sbjct: 81  NTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRS 140

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++ +G++     Y  L++G      +  A  ++ EM  SG+ P+   YS L+  Y  +GR
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WE    V  EM     +P+  +Y+ ++      G+ ++   V+  M   G+EP+   YNV
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K   +  A+    +M  +G+ PD +T+NTLI         D A  L EEM  RG
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RG 319

Query: 506 ---YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P   T+N +I  L +  R     ++   M   G + N+VTY  L+    +  +  
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+E    L D+       M + GL+P +   + LI  F +  +   A  +L  M++ G+
Sbjct: 380 KAME----LMDE-------MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 623 KPDVVTYTTLMKAL 636
           +P++  Y  L+ A+
Sbjct: 429 EPELFHYIPLLVAM 442



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 12/381 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFL 184
           ++ SLL+  C S    D+    V   +K        ++Y+ LI +L   G+++K +    
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKG--IEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           +  R+ L P  +TYN LI+   +   +++A+ ++ KM + G   D + Y+ +I+ L+   
Sbjct: 245 MMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 243 KIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           ++D +  LL+++ +     K  +     N VI G    G   +A +   M +  G     
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNV--VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  +I  L    +  +A  + +E+   GL+P +  Y+ L+KG+ KM  +  AE ++S 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+ P+   Y  L+ A    G  E AR +  EM+ ++   +   YS ++ G    G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGD 481

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +   ++LK +   G+ PD   Y+++I+ F K   +  A     +M + G  PD   +++
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 481 LIDCHFKCGRYDRAEELFEEM 501
           LI  +   G  ++  EL  EM
Sbjct: 542 LIQGYSTKGEINKVLELIREM 562



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 16/283 (5%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVS---HAKPNSFIYSRILAGYRDRGEWQRTF 425
           D  +Y+ ++ A    G  + A  +L+ M +      +PN+  Y+ ++          +  
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L+ M+S+GV  D   Y  +I        +  A+     M   GIEP+ + +++L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR++   ++F EM E+G  P    Y  +I+ L +  + +    ++  M  +GL PNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY  L++             C EG   +A+   + M   G+ P  +  N+LI    +  
Sbjct: 256 VTYNVLINCM-----------CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 606 RDAEAFAVLQYM--KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              EA  +L+ M   +N +KP+VVT+ ++++ L  + +  + F
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF 347



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 158/329 (48%), Gaps = 11/329 (3%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-F 183
           P  + +++L N      S+  A  V+  + +  +     + Y+ LI  L    ++ EA +
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV-VTYNTLIKGLSDVLEMDEAMW 311

Query: 184 LLSQRQR----LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           LL +  R    + P  +T+N++I        + +A  + + M + G   + + Y+L+I  
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L R +K+  ++  +L  E+    +E D    + +I GF K     +A   L   +  G+ 
Sbjct: 372 LLRVHKVRKAM--ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P+   Y  ++ A+   G    A  +F E+ ++       AY+ ++ G  K G LK A+ +
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  +   G+ PD  TYS++I+ +A +G  E+A  VLK+M  S   P+  ++  ++ GY  
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           +GE  +  ++++EM +  +  D+   + +
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTL 577


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 215/460 (46%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + +N L+SA A+    +  ++L  KM++         Y+++I    R ++
Sbjct: 38  MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 97

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           I  +L  L K+ K      I     LLN    G+      S A+  +     +G  P T 
Sbjct: 98  ISLALALLGKMMKLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTI 153

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + + + G +P    Y  ++ G  K G    A  ++++M
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E + +  D   ++ +ID+       + A  + KEME    +PN   YS +++     G W
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               Q+L +M    + P+   +N +ID F K      A   +D M+   I+PD  T+N+L
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ++      R D+A+++FE M  +  FP   TYN +I    + +R ED   L   M  +GL
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + + VTYTTL+      G F D      G  D A   F+ M +DG+ P  +  + L++  
Sbjct: 394 VGDTVTYTTLI-----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             + +  +A  V  YM+++ +K D+  YTT+++ + +  K
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 225/480 (46%), Gaps = 22/480 (4%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI+   R  ++  A  LL +  +L    + +T ++L++       +  A+ L+ +M 
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + GY  D I ++ +I  L   NK   +  L+ ++ +      +   G ++N    G  K 
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN----GLCKR 200

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD   A+  L   +   +      +  +I +L       +A  +F+E++  G++P    Y
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+      G   DA  ++S+M    + P+  T++ LIDA+   G++  A  +  +M  
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+ F Y+ ++ G+       +  Q+ + M S    PD   YN +I  F K   +  
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F  M   G+  DT+T+ TLI   F  G  D A+++F++M   G  P   TY+I+++
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    + E    +   M+   +  ++  YTT+++   ++G+ DD  +    LS      
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS------ 494

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G+KP+ +  N++I+     +   EA+A+L+ MKE+G  P+  TY TL++A +R
Sbjct: 495 -----LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LIH L    K  EA  L  R  QR   P  +TY  +++   +  D + ALNL++KM 
Sbjct: 155 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 214

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D + ++ +I SL +   +D +L   L+KE+E   I  +    + +I      G 
Sbjct: 215 AAKIEADVVIFNTIIDSLCKYRHVDDAL--NLFKEMETKGIRPNVVTYSSLISCLCSYGR 272

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A + L       ++P   T+ A+I A    G+ +EAE +++++ +  + P    YN+
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     L  A+ +   M      PD  TY+ LI  +  + R E    + +EM    
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              ++  Y+ ++ G    G+     +V K+M S GV PD   Y++++D       L  A+
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M    I+ D   + T+I+   K G+ D   +LF  +  +G  P   TYN MI+ L
Sbjct: 453 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             +   ++   LL  M+  G LPN  TY TL+  + + G
Sbjct: 513 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 21/495 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S I LA A++  + K  L Y   ++  S L++     +++ +A  L  +
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 142

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 R   +T+  LI     ++   +A+ L+ +M Q G   + + Y +V+  L +   
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG- 201

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D+ L   L  ++E  KIE D  + N +I    K      A+      +  G+ P   TY
Sbjct: 202 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I+ L + GR  +A  +  ++ E  + P    +NAL+  +VK G   +AE +  +M +
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TY+ L++ +    R + A+ + + M      P+   Y+ ++ G+      + 
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  DT  Y  +I          +A   F +M+S+G+ PD +T++ L+D
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G+ ++A E+F+ MQ+         Y  MI  + +  + +D   L  ++  +G+ P
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTY T++     SG       C + L  +A    + M+ DG  P++   N+LI A   
Sbjct: 501 NVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 549

Query: 604 DQRDAEAFAVLQYMK 618
           D   A +  +++ M+
Sbjct: 550 DGDKAASAELIREMR 564



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 11/381 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F +    S A+  LG    +G  P   T ++++    +  R  +A A+ +++ E
Sbjct: 86  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P T  +  L+ G        +A  +V  M + G  P+  TY ++++     G  + 
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +ME +  + +  I++ I+              + KEM++ G+ P+   Y+ +I 
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+ + I P+ +T+N LID   K G++  AE+L+++M +R   P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN ++N     +R +  K++   M ++   P+VVTY TL+  + +S R +D  E  
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE-- 383

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL    +   +LI     D     A  V + M  +G+ PD++T
Sbjct: 384 ---------LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           Y+ L+  L    K  K    +
Sbjct: 435 YSILLDGLCNNGKLEKALEVF 455



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 2/331 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   +TY++LIS          A  L+S M +   + + + ++ +I +  +  K   +  
Sbjct: 254 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-- 311

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           +KLY ++    I+ D    N ++ GF       KA +           P   TY  +I  
Sbjct: 312 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 371

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              S R  +   +F E+   GL   T  Y  L++G    G   +A+ V  +M   GV PD
Sbjct: 372 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 431

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS+L+D   N G+ E A  V   M+ S  K + +IY+ ++ G    G+    + +  
Sbjct: 432 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 491

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            +   GV+P+   YN MI        L  A A   +M  +G  P++ T+NTLI  H + G
Sbjct: 492 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               + EL  EM+   +    +T  ++ N+L
Sbjct: 552 DKAASAELIREMRSCRFVGDASTIGLVANML 582



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 164/360 (45%), Gaps = 20/360 (5%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G   S  +  Y  ++    +  +  +A  +F  + +S   P    +N LL    KM   K
Sbjct: 5   GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKM---K 61

Query: 353 DAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
             + V+S   +M+R  ++   +TY++LI+ +    +   A  +L +M     +P+    S
Sbjct: 62  KFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 121

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +L GY           ++ +M   G  PDT  +  +I     +N    A+A  DRM+  
Sbjct: 122 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 181

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G +P+ +T+  +++   K G  D A  L  +M+          +N +I+ L +    +D 
Sbjct: 182 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 241

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             L   M  +G+ PNVVTY++L+      GR+ DA + L  + ++ +N           P
Sbjct: 242 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN-----------P 290

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           + +  N+LI+AF ++ +  EA  +   M +  + PD+ TY +L+       R+DK  ++F
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 239/566 (42%), Gaps = 58/566 (10%)

Query: 122 RAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           R  P P    + SL+   C  N  ++ A  V   + + N      + Y+ LIH L  + K
Sbjct: 217 RCEPGPDLFTYTSLVLGYCR-NDDVERACGVFCVMPRRN-----AVSYTNLIHGLCEAGK 270

Query: 179 LYEAFLLSQRQR-----LTPLTYNALISA-CARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           L+EA     R R      T  TY  L+ A C    +LE AL+L  +MR+ G   +   Y+
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEMRERGCEPNVYTYT 329

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           ++I  L +  ++D +L  K+  E+    +       N +I  + K G    A+  LG+ +
Sbjct: 330 VLIDYLCKEGRMDEAL--KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              + P   TY  +I           A A+  ++ ES L P    YN L+ G  ++G + 
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  +   M R G  PD+ T++  +      GR   A  +L+ ++  H K N   Y+ ++
Sbjct: 448 SASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            GY   G+ +    + K M +    P++  +NVMID   K   +  AM   + M    ++
Sbjct: 508 DGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVK 567

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P   T+N L++   K   +DRA E+   +   GY P   TY   I     Q R E+ + +
Sbjct: 568 PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEM 627

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           +  ++ +G+L +   Y  L++ YG          C+ GL D A    R M   G +PS L
Sbjct: 628 VIKIKNEGVLLDSFIYNLLINAYG----------CM-GLLDSAFGVLRRMFGTGCEPSYL 676

Query: 593 ALNSLINAFGEDQRDAEA-------------------------FAV----LQYMKENGLK 623
             + L+     ++   E                          F +     + M E G  
Sbjct: 677 TYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCV 736

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P++ TY+ L+  L +V + +  FS Y
Sbjct: 737 PNLNTYSKLINGLCKVGRLNVAFSLY 762



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 131/579 (22%), Positives = 245/579 (42%), Gaps = 67/579 (11%)

Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL 169
           L+R  ++   S + +   L  SLL +L + N     A     W+++H+            
Sbjct: 33  LSRPRWRKDPSLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHH----------NF 82

Query: 170 IHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM---------- 219
            H+L     L    +  +  R      N++I +C    D    LNL+ +M          
Sbjct: 83  PHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQ 142

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK---IELDGQLLNDVIVGFA 276
            Q  +     +Y+ ++  L+R + +D  +   LYKE+  D    +  +   LN ++  + 
Sbjct: 143 HQLAFKLSLTSYNRLLMCLSRFSMVDEMI--SLYKEMLTDNGNSVFPNLITLNTMLNSYC 200

Query: 277 KAGDASKA----MRFLGMAQGVGLSPKTA---------------------------TYAA 305
           K G+ + A    +R L    G  L   T+                           +Y  
Sbjct: 201 KLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTN 260

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L  +G+  EA   +  ++E G  P  + Y  L+    + G   +A  +  EM   G
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERG 320

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P+ +TY++LID     GR + A  +L EM      P+   ++ ++  Y  RG  +   
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            VL  M+S  V P+   YN +I  F +   +  AMA  ++M+   + PD +T+NTLI   
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G  D A  LF  M   G+ P   T+N  +  L    R  +  ++L +++ + +  N 
Sbjct: 441 CEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANE 500

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
             YT L+D Y ++G+ +            A + F+ M  +   P+++  N +I+   ++ 
Sbjct: 501 HAYTALIDGYCKAGKIE-----------HAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  +A  +++ M +  +KP + TY  L++ +++   F +
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDR 588



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 216/509 (42%), Gaps = 57/509 (11%)

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           L + +++ P   TYN LI    R   +++A+ L++KM +     D + Y+ +I  L    
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +DS+   +L++ +  D    D    N  +V   + G   +A + L   +   +      
Sbjct: 445 VVDSA--SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHA 502

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I     +G+   A ++F+ +      P +  +N ++ G  K G ++DA  +V +M 
Sbjct: 503 YTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA 562

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           +  V P  HTY++L++       ++ A  +L  +  S  +PN   Y+  +  Y  +G  +
Sbjct: 563 KFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLE 622

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL- 481
              +++ ++K+ GV  D+  YN++I+ +G    L  A     RM   G EP  +T++ L 
Sbjct: 623 EAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682

Query: 482 ----IDCHFKCGR------------------------YDRAEELFEEMQERGYFPCTTTY 513
               I+ H K G                         +     LFE+M E G  P   TY
Sbjct: 683 KHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTY 742

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---- 569
           + +IN L +  R      L  +MR  G+ P+ + + +L+    + G F +A+  L+    
Sbjct: 743 SKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME 802

Query: 570 ---------------GLSDQ-----AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                          GL +Q     A   F  +   G     +A   LI+   +     +
Sbjct: 803 CSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQ 862

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +L  M++NG +    TY+ LM+ L R
Sbjct: 863 CSELLNLMEKNGCRLHPETYSMLMQELNR 891



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 224/522 (42%), Gaps = 50/522 (9%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI  L +  ++ EA  +L++   + + P  + +NALI +  +   +E A+ ++  M 
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 +   Y+ +I    R   +D ++   L K +E  K+  D    N +I G  + G 
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAM-ALLNKMVE-SKLSPDVVTYNTLIHGLCEVGV 445

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A R   +    G SP   T+ A +  L   GR  EA  + E LKE  +K    AY A
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K G ++ A  +   M     LP+  T++++ID     G+ + A +++++M    
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP    Y+ ++       ++ R  ++L  + SSG +P+   Y   I  +     L  A 
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-NL 519
               ++ +EG+  D+  +N LI+ +   G  D A  +   M   G  P   TY+I++ +L
Sbjct: 626 EMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685

Query: 520 LGEQER-----------------------WEDV-----KRLLGNMRAQGLLPNVVTYTTL 551
           + E+ +                       W  +       L   M   G +PN+ TY+ L
Sbjct: 686 VIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKL 745

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++   + GR            + A + +  MR  G+ PS +  NSL+++  +     EA 
Sbjct: 746 INGLCKVGRL-----------NVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAV 794

Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
            +L  M E      + +Y  L+  L   +  +K   VF S L
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 208/500 (41%), Gaps = 42/500 (8%)

Query: 117 LAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL-- 173
           L ES +  P    ++ L+   C    S+D A A+++ + +  L     + Y+ LIH L  
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRG-KSMDRAMALLNKMVESKLSPDV-VTYNTLIHGLCE 442

Query: 174 -GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
            G  +     F L  R   +P   T+NA +    R   + +A  ++  +++     +   
Sbjct: 443 VGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHA 502

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ +I    +  KI+ +    L+K +  ++   +    N +I G  K G    AM  +  
Sbjct: 503 YTALIDGYCKAGKIEHA--ASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVED 560

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                + P   TY  ++  +        A  +   L  SG +P    Y A +K Y   G 
Sbjct: 561 MAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGR 620

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS- 409
           L++AE +V +++  GVL D   Y+LLI+AY   G  +SA  VL+ M  +  +P+   YS 
Sbjct: 621 LEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSI 680

Query: 410 ----RILAGYRDRGE-------------------WQR-----TFQVLKEMKSSGVEPDTH 441
                ++  ++  G                    W +     T  + ++M   G  P+ +
Sbjct: 681 LMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLN 740

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+ +I+   K   L+ A + +  M   GI P  I  N+L+    K G +  A  L + M
Sbjct: 741 TYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            E  +     +Y ++I  L EQ   E  + +  ++   G   + V +  L+D   ++G  
Sbjct: 801 MECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYV 860

Query: 562 DDAIECLEGLSDQAVNAFRV 581
           D   +C E L+    N  R+
Sbjct: 861 D---QCSELLNLMEKNGCRL 877


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 215/460 (46%), Gaps = 17/460 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++  R   + + +N L+SA A+    +  ++L  KM++         Y+++I    R ++
Sbjct: 76  MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           I  +L  L K+ K      I     LLN    G+      S A+  +     +G  P T 
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+  +I  L    +  EA A+ + + + G +P    Y  ++ G  K G    A  ++++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E + +  D   ++ +ID+       + A  + KEME    +PN   YS +++     G W
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               Q+L +M    + P+   +N +ID F K      A   +D M+   I+PD  T+N+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ++      R D+A+++FE M  +  FP   TYN +I    + +R ED   L   M  +GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + + VTYTTL+      G F D      G  D A   F+ M +DG+ P  +  + L++  
Sbjct: 432 VGDTVTYTTLI-----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             + +  +A  V  YM+++ +K D+  YTT+++ + +  K
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 225/480 (46%), Gaps = 22/480 (4%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI+   R  ++  A  LL +  +L    + +T ++L++       +  A+ L+ +M 
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + GY  D I ++ +I  L   NK   +  L+ ++ +      +   G ++N    G  K 
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN----GLCKR 238

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD   A+  L   +   +      +  +I +L       +A  +F+E++  G++P    Y
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L+      G   DA  ++S+M    + P+  T++ LIDA+   G++  A  +  +M  
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+ F Y+ ++ G+       +  Q+ + M S    PD   YN +I  F K   +  
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F  M   G+  DT+T+ TLI   F  G  D A+++F++M   G  P   TY+I+++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L    + E    +   M+   +  ++  YTT+++   ++G+ DD  +    LS      
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS------ 532

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G+KP+ +  N++I+     +   EA+A+L+ MKE+G  P+  TY TL++A +R
Sbjct: 533 -----LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LIH L    K  EA  L  R  QR   P  +TY  +++   +  D + ALNL++KM 
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D + ++ +I SL +   +D +L   L+KE+E   I  +    + +I      G 
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDAL--NLFKEMETKGIRPNVVTYSSLISCLCSYGR 310

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A + L       ++P   T+ A+I A    G+ +EAE +++++ +  + P    YN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     L  A+ +   M      PD  TY+ LI  +  + R E    + +EM    
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              ++  Y+ ++ G    G+     +V K+M S GV PD   Y++++D       L  A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M    I+ D   + T+I+   K G+ D   +LF  +  +G  P   TYN MI+ L
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             +   ++   LL  M+  G LPN  TY TL+  + + G
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 21/495 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
           +++L N     S I LA A++  + K  L Y   ++  S L++     +++ +A  L  +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 R   +T+  LI     ++   +A+ L+ +M Q G   + + Y +V+  L +   
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG- 239

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D+ L   L  ++E  KIE D  + N +I    K      A+      +  G+ P   TY
Sbjct: 240 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +++I+ L + GR  +A  +  ++ E  + P    +NAL+  +VK G   +AE +  +M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD  TY+ L++ +    R + A+ + + M      P+   Y+ ++ G+      + 
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +EM   G+  DT  Y  +I          +A   F +M+S+G+ PD +T++ L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G+ ++A E+F+ MQ+         Y  MI  + +  + +D   L  ++  +G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTY T++     SG       C + L  +A    + M+ DG  P++   N+LI A   
Sbjct: 539 NVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587

Query: 604 DQRDAEAFAVLQYMK 618
           D   A +  +++ M+
Sbjct: 588 DGDKAASAELIREMR 602



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 11/381 (2%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  F +    S A+  LG    +G  P   T ++++    +  R  +A A+ +++ E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P T  +  L+ G        +A  +V  M + G  P+  TY ++++     G  + 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +ME +  + +  I++ I+              + KEM++ G+ P+   Y+ +I 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               Y     A      M+ + I P+ +T+N LID   K G++  AE+L+++M +R   P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN ++N     +R +  K++   M ++   P+VVTY TL+  + +S R +D  E  
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE-- 421

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M   GL    +   +LI     D     A  V + M  +G+ PD++T
Sbjct: 422 ---------LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           Y+ L+  L    K  K    +
Sbjct: 473 YSILLDGLCNNGKLEKALEVF 493



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 2/331 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   +TY++LIS          A  L+S M +   + + + ++ +I +  +  K   +  
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-- 349

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           +KLY ++    I+ D    N ++ GF       KA +           P   TY  +I  
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              S R  +   +F E+   GL   T  Y  L++G    G   +A+ V  +M   GV PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS+L+D   N G+ E A  V   M+ S  K + +IY+ ++ G    G+    + +  
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            +   GV+P+   YN MI        L  A A   +M  +G  P++ T+NTLI  H + G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
               + EL  EM+   +    +T  ++ N+L
Sbjct: 590 DKAASAELIREMRSCRFVGDASTIGLVANML 620



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 169/373 (45%), Gaps = 21/373 (5%)

Query: 281 ASKAMRFLGMAQ-GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           A  ++   GM   G   S  +  Y  ++    +  +  +A  +F  + +S   P    +N
Sbjct: 30  APSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFN 89

Query: 340 ALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            LL    KM   K  + V+S   +M+R  ++   +TY++LI+ +    +   A  +L +M
Sbjct: 90  KLLSAIAKM---KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +P+    S +L GY           ++ +M   G  PDT  +  +I     +N  
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+A  DRM+  G +P+ +T+  +++   K G  D A  L  +M+          +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ L +    +D   L   M  +G+ PNVVTY++L+      GR+ DA + L  + ++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N           P+ +  N+LI+AF ++ +  EA  +   M +  + PD+ TY +L+   
Sbjct: 327 N-----------PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375

Query: 637 I---RVDKFHKVF 646
               R+DK  ++F
Sbjct: 376 CMHDRLDKAKQMF 388


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 205/448 (45%), Gaps = 27/448 (6%)

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G+  D +  + +++ +   N I  ++  +L+ E+    +  D +    +I G  KA    
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAV--QLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A++     +G        TY  +I +L   G T EA  +F E+  +G+ P    Y++L+
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G  + G LK+A     EME  G+  D +TY+ LI   + AG W+     L  M      
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P++F ++ ++ G    G+     Q+L+ M   G EPD   YN +++       L  A   
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F+ +   GI+ +  ++N LI+ + K  + D A  LFEEM+ +G  P T TYN +I  L +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------- 566
             R    ++L   M+  G    + TY  L+D   ++G  ++AI+                
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 567 --------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C  G  ++A   F  +  +GL+P  +A N LIN        +EA  +L  M+
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E G  PD +T+  +++ L++ ++ H+  
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAI 516



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 195/413 (47%), Gaps = 6/413 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLT----PLTYNALISACARNDDLEKALNLMSKMRQ 221
           Y ILI+ L ++ K   A  L ++ +        TY  +I +  ++    +AL++ S+M  
Sbjct: 115 YGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIG 174

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D + YS ++  L R  ++  +L  + +KE+E   I  D    N +I G ++AG  
Sbjct: 175 AGILPDVVVYSSLMDGLCRFGRLKEAL--EFFKEMEGRGISADVYTYNSLIHGLSRAGLW 232

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +   FL +    G SP   T+  +I  L   G+  EA+ + E +   G +P    YN L
Sbjct: 233 KEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTL 292

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G   +G L+DA  +   +   G+  +  +Y++LI+ Y    + + A  + +EM     
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP++  Y+ ++      G  +   ++  EM++ G       Y V++D   K   L  A+ 
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  +     +P+   ++ L+D   + G+ + A + F+E+ + G  P T  YNI+IN L 
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 472

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +    +  +LL  M  +G LP+ +T+  ++    +     +AI+ LE + ++
Sbjct: 473 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 525


>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 779

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 226/510 (44%), Gaps = 52/510 (10%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALI 200
           A  +  ++Q+H  C   E +Y+I+I  +GR   L +A  L +   L  + +N     ALI
Sbjct: 57  ALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALI 116

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
           +A  RN   E +L+L+++M+++    + I Y+ VI +                    C K
Sbjct: 117 NAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINA--------------------CAK 156

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
             L+ + L                +      +  G+ P   TY  +++A S+ G   EA 
Sbjct: 157 GGLEWEGL----------------LGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAG 200

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            VF  + E+G+ P +  YNAL+  Y +    +    ++ EME++G  PD   Y++LI+AY
Sbjct: 201 MVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAY 260

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
             AG++ +A  + K+M+ +   P+   +S +L  Y   G +     +  +MK  G EPD 
Sbjct: 261 GRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDV 320

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + YN +I  FG+      ++  F  +L  G+EPD  T+  L+    K G +  A+++   
Sbjct: 321 NTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRH 380

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M +    P T  +  +I   G    + +      +M+  G  P++ TY  L+  +   G 
Sbjct: 381 MLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGL 440

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
           +     C      +A +A+  M  +G+       NSLI AFG      +A    + M+E 
Sbjct: 441 Y-----C------EAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEA 489

Query: 621 GLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
              P+  TY  LM        F +  + +L
Sbjct: 490 RCSPNRHTYEALMGVYCTAGLFDEAKAQFL 519



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 28/403 (6%)

Query: 275 FAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           FA+  D  KA+R F  M +     P    Y  +I  +   G   +A  +FE++  + ++ 
Sbjct: 48  FAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEW 107

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG-RWESARIV 392
              ++ AL+  Y + G  + +  +++ M+R  V P+  TY+ +I+A A  G  WE    +
Sbjct: 108 NVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGL 167

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             +M     +P+   Y+ +L+    RG  +    V + M  +GV PD+  YN ++D +G+
Sbjct: 168 FAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQ 227

Query: 453 YNCLHHAMAAFDR-MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
            +  H  +    R M   G  PD + +N LI+ + + G+Y  A ++F++MQE G  P   
Sbjct: 228 AD-RHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVV 286

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL--- 568
           T++ ++   G+   +++V+ L  +M+ +G  P+V TY TL+ ++GQ G F ++I      
Sbjct: 287 TFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDL 346

Query: 569 ---------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                                 GL   A    R M    + P+      LI A+G     
Sbjct: 347 LDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALY 406

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +EA      MKE+G KPD+ TY  L+ A      + +  S+YL
Sbjct: 407 SEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYL 449



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 13/254 (5%)

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTF 450
           + K ME    K     +S I   +  R +WQ+  ++ K M +    +P+ H Y +MI   
Sbjct: 25  IAKTMEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIM 84

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           G+   L  A   F+ M    +E +  ++  LI+ + + G+++ +  L   M+     P  
Sbjct: 85  GREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNL 144

Query: 511 TTYNIMINLLGEQE-RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            TYN +IN   +    WE +  L   MR +G+ P+++TY TL+                 
Sbjct: 145 ITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSS-----------R 193

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           GL ++A   FR M   G+ P ++  N+L++ +G+  R      +L+ M++ G  PDVV Y
Sbjct: 194 GLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAY 253

Query: 630 TTLMKALIRVDKFH 643
             L++A  R  K+ 
Sbjct: 254 NILIEAYGRAGKYR 267


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 213/459 (46%), Gaps = 9/459 (1%)

Query: 116 KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           K+ ++  ++    + SL+   C  N ++D A A+   +     C   E+ Y+ LIH    
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCR-NKNVDAANAIFLSMPNKG-CLRNEVSYTNLIHGFCE 286

Query: 176 SEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           + ++ EA  L SQ        T  TY  +I A  +     +ALN+  +M +     +   
Sbjct: 287 ARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHT 346

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+++I SL   +  D +  +K+   +    +       N +I G+ K G ++ A+  L +
Sbjct: 347 YTVLICSLCEDSNFDDA--KKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSL 404

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +    SP   TY  +I          +A ++  ++ E  L+P    YN L+ G  K G 
Sbjct: 405 MESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGD 464

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L  A  ++S M  SG++PDE TYS+ ID     G  E AR + + ++    K N  IYS 
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYST 524

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ GY   G+      +L +M S+G  P++  YN +ID + K      A    D M+   
Sbjct: 525 LIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           IEP   T+  LID   K   +D+A ++F++M   G  P    Y   I+      R +D +
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            L+  M A+G++P+ + YT  +D YG+ G  D A   L+
Sbjct: 645 VLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 207/458 (45%), Gaps = 51/458 (11%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++++  L+R   ID   ++ +Y E+  D +  +   LN ++ G+ K G+  +A  ++  
Sbjct: 172 YNMLLMLLSRFLMIDE--MKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSK 229

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GLS  T TY ++I     +     A A+F  +   G      +Y  L+ G+ +   
Sbjct: 230 IVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARR 289

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A  + S+M      P   TY+++I A    GR   A  + KEM   H +PN   Y+ 
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 411 ILA-----------------------------------GYRDRGEWQRTFQVLKEMKSSG 435
           ++                                    GY  +G      ++L  M+S+ 
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P+   YN +I  F +   +H AM+   +ML   ++P+ +T+N LI    K G    A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L   M E G  P   TY++ I+ L ++   E+ + L  +++ +G+  N V Y+TL+D Y
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + G+  D       L D+ ++A       G  P+++  NSLI+ + +++   EA  ++ 
Sbjct: 530 CKVGKVSDG----RFLLDKMLSA-------GCVPNSITYNSLIDGYCKEKNFKEARLLVD 578

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYL 650
            M +  ++P   TYT L+  L++ D+F   H +F   L
Sbjct: 579 IMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 131/593 (22%), Positives = 233/593 (39%), Gaps = 94/593 (15%)

Query: 78  QKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLC 137
           Q   + +T L+  L E+SN + A  + +           + E         +++L+   C
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILNG----------MLEKGLIPSVVTYNALIDGYC 390

Query: 138 SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP- 193
               S   A  ++S ++ +N C      Y+ LI    R + +++A  L  +   ++L P 
Sbjct: 391 KKGLSAS-ALEILSLMESNN-CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN 448

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +TYN LI    +  DL  A  L+S M + G   D   YS+ I +L +   ++ +  + L
Sbjct: 449 VVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEA--RSL 506

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           ++ ++   I+ +  + + +I G+ K G  S     L      G  P + TY ++I     
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 313 SG--------------RTIEAEA---------------------VFEELKESGLKPRTKA 337
                           R IE  A                     +F+++  +G  P    
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y A +  Y   G LKDAE ++ +M   G++PD   Y+L IDAY   G  + A  +LK M 
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 398 VSHAKPNSFIYSRILAGYRD-----------------------------RGEWQRTFQVL 428
               +P+ + YS ++    +                             R +++ T  + 
Sbjct: 687 EVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLF 746

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M   G  P+ + Y   I    K  CL  A   FD M  +G  P+   +N+L+ C  + 
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQL 806

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G Y  A    + M E  + P   +  +++  L ++   E  KR+  +        + + +
Sbjct: 807 GLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVW 866

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             L+D     G         +GLSD+  + F +M T G +      + LI  F
Sbjct: 867 KVLID-----GLLK------KGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 205/431 (47%), Gaps = 15/431 (3%)

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           + L+ +M   G   D + Y +V+  L +    D+ L   L  ++E  K+E    + N +I
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTDLAFNLLNKMEQGKLEPGVLIYNTII 58

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
            G  K      A+      +  G+ P   TY+++I+ L N GR  +A  +  ++ E  + 
Sbjct: 59  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    ++AL+  +VK G L +AE +  EM +  + P   TYS LI+ +    R + A+ +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            + M   H  P+   Y+ ++ G+      +   +V +EM   G+  +T  YN++I    +
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A   F  M+S+G+ P+ +T+NTL+D   K G+ ++A  +FE +Q     P   T
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 298

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YNIMI  + +  + ED   L  N+  +G+ P+VV Y T++  +           C +G  
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF-----------CRKGSK 347

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           ++A   F+ M+ DG  P++   N+LI A   D     +  +++ M+  G   D  T   +
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407

Query: 633 MKAL--IRVDK 641
              L   R+DK
Sbjct: 408 TNMLHDGRLDK 418



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 180/401 (44%), Gaps = 8/401 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P  + + ++ N        DLA+ +++ +++  L     L+Y+ +I  L + + + +A  
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-EPGVLIYNTIIDGLCKYKHMDDALN 72

Query: 185 L-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L     ++  R   +TY++LIS          A  L+S M +   + D   +S +I +  
Sbjct: 73  LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K+  +  +KLY E+    I+      + +I GF       +A +           P 
Sbjct: 133 KEGKLVEA--EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I       R  E   VF E+ + GL   T  YN L++G  + G    A+ +  
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   GV P+  TY+ L+D     G+ E A +V + ++ S  +P  + Y+ ++ G    G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +  + +   +   GV+PD   YN MI  F +      A A F  M  +G  P++  +N
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           TLI    + G  + + EL +EM+  G+    +T  ++ N+L
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 11/301 (3%)

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++  M   G  PD  TY ++++     G  + A  +L +ME    +P   IY+ I+ G  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                     + KEM++ G+ P+   Y+ +I     Y     A      M+   I PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ LID   K G+   AE+L++EM +R   P   TY+ +IN     +R ++ K++   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            ++   P+VVTY TL+  + +  R ++ +E            FR M   GL  + +  N 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGME-----------VFREMSQRGLVGNTVTYNI 231

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           LI    +      A  + + M  +G+ P+++TY TL+  L +  K  K    + +    K
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291

Query: 657 M 657
           M
Sbjct: 292 M 292



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 27/214 (12%)

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           MA  DRM+++G +PD +T+  +++   K G  D A  L  +M++    P    YN +I+ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA- 578
           L + +  +D   L   M  +G+ PNVVTY++L+      GR+ DA   L  + ++ +N  
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 579 -----------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                                  +  M    + PS +  +SLIN F    R  EA  + +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 616 YMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           +M      PDVVTY TL+K      RV++  +VF
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 201/445 (45%), Gaps = 64/445 (14%)

Query: 258 CDKIELDG-----QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           C K+EL+G       LN +I  F +      A   LG    +G  P T T+  +I  L  
Sbjct: 88  CKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCL 147

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             +  EA  +   + E+G +P    YN+++ G  K G    A  ++ +M+   V  D  T
Sbjct: 148 ESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFT 207

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           YS +ID+    G  ++A  + KEME    K +   Y+ ++ G    G+W    Q+LK+M 
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--------- 483
           S  + P+   +NV+ID F K   L  A   +  M+++GI P+TIT+N+L+D         
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327

Query: 484 -------------C-------------HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                        C             + K  R D   +LF ++ +RG    T TY+I++
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
               +  + E  + L   M + G+LP+V+TY  L+D    +G+ + A+E  E L    +N
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447

Query: 578 AFRVMRT------------------------DGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              VM T                         G+KP+ +    +I+   +    +EA  +
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
           L+ M+E+G +P+  TY TL++A +R
Sbjct: 508 LRKMEEDGNEPNDCTYNTLIRAHLR 532



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 196/423 (46%), Gaps = 14/423 (3%)

Query: 145 LAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
            AY+V+  + K      YE     ++ LI+ L    K+ EA +L  R      +   +TY
Sbjct: 118 FAYSVLGKVMK----LGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTY 173

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N++++   ++ D   AL+L+ KM +     D   YS +I SL R   ID+++   L+KE+
Sbjct: 174 NSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEM 231

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E   I+      N ++ G  KAG  +  ++ L       + P   T+  +I      G+ 
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  +++E+   G+ P T  YN+L+ GY     L +A  ++  M R+   PD  T++ L
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  Y    R +    + +++       N+  YS ++ G+   G+ +   ++ +EM S GV
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y +++D       L  A+  F+ +    +  D + +  +I+   K G+ + A  
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF  +  +G  P   TY +MI+ L ++    +   LL  M   G  PN  TY TL+  + 
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531

Query: 557 QSG 559
           + G
Sbjct: 532 RDG 534



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/466 (22%), Positives = 207/466 (44%), Gaps = 26/466 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N +I+   R      A +++ K+ + GY  D   ++ +I  L   +K+  +++  L  
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVV--LVA 159

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +  +  + +    N ++ G  K+GD S A+  L       +     TY+ +I +L   G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++F+E++  G+K     YN+L+ G  K G   D   ++ +M    ++P+  T++
Sbjct: 220 CIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFN 279

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID +   G+ + A  + KEM      PN+  Y+ ++ GY  +        +L  M  +
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              PD   +  +I  + K   +   M  F ++   G+  +T+T++ L+    + G+ + A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           EELF+EM   G  P   TY I+++ L +  + E    +  +++   +  ++V YT +++ 
Sbjct: 400 EELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEG 459

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
             + G+ +DA                          C +G   +A    R M  DG +P+
Sbjct: 460 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPN 519

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +   N+LI A   D     +  +++ MK  G   D  +   ++  L
Sbjct: 520 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 213/474 (44%), Gaps = 20/474 (4%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           F  L+N L   S    A  L +          ++ E+        ++S++  +C S  + 
Sbjct: 138 FNTLINGLCLESKVSEAVVLVA----------RMVENGCQPNVVTYNSIVNGICKSGDT- 186

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNA 198
            LA  ++  + + N+  +    YS +I +L R   +  A  L     ++  + + +TYN+
Sbjct: 187 SLALDLLRKMDERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+    +       + L+  M       + I ++++I    +  K+  +   +LYKE+  
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA--NELYKEMIT 303

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I  +    N ++ G+      S+A   L +      SP   T+ ++I       R  E
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
              +F ++ + GL   T  Y+ L++G+ + G L+ AE +  EM   GVLPD  TY +L+D
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLD 423

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
              + G+ E A  + ++++ S    +  +Y+ I+ G    G+ +  + +   +   GV+P
Sbjct: 424 GLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKP 483

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   Y VMI    K   L  A     +M  +G EP+  T+NTLI  H + G    + +L 
Sbjct: 484 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLI 543

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERW-EDVKRLLGNMRAQGLLPNVVTYTTL 551
           EEM+  G+    ++  ++I++L     W ++ +R  G  R +G    ++ + T+
Sbjct: 544 EEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGVKRFRGTQAYLMPFNTI 597



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 11/258 (4%)

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + +EM  S   P+   +SR  +G     ++       K+M+ +G+  + +  N+MI+ F 
Sbjct: 52  LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +      A +   +++  G EPDT T+NTLI+      +   A  L   M E G  P   
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN ++N + +         LL  M  + +  +V TY+T++D             C +G 
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSL-----------CRDGC 220

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            D A++ F+ M T G+K S +  NSL+    +  +  +   +L+ M    + P+V+T+  
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+   ++  K  +    Y
Sbjct: 281 LIDVFVKEGKLQEANELY 298


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 219/488 (44%), Gaps = 26/488 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ ++ +L + ++   A  LS++      R   +T N LI+       +  + +++ K+ 
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD----GQLLNDVIVGFA 276
           + GY  D I  + +++ L    ++  SL    + ++     ++D    G LLN    G  
Sbjct: 73  KLGYQPDTITLNTLMKGLCLKGEVKKSL--HFHDKVVAQGFQMDHVSYGTLLN----GLC 126

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K G+   A++ L M +     P    Y  +I  L       EA  ++ E+   G+ P   
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+ G+  +G L  A  ++ EM    + P  + Y++LI+A    G  + A+ +L  M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                KP    YS ++ GY   GE Q   Q+   M   GV P+ + YN+MI+   K   +
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM     ML + + PDT+T+N+LID   K GR   A  L  EM  RG      TY  +
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           ++ L + +  +    L   M+ +G+ P + TYT L+D   + GR  +A E          
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE---------- 416

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F+ +   G          +I+   ++    EA A+   M++NG  P+ VT+  ++++L
Sbjct: 417 -LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475

Query: 637 IRVDKFHK 644
              D+  K
Sbjct: 476 FEKDENDK 483



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 189/411 (45%), Gaps = 13/411 (3%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I ++ ++ SL +  +  +++   L K++E   I  +   LN +I  F   G  + +   
Sbjct: 10  IIEFNKILGSLAKMKQYLTAI--SLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T T   ++  L   G   ++    +++   G +    +Y  LL G  K
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  + A  ++  +E     P+   Y+ +ID          A  +  EM+     P++  
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G+   G+    F +L EM    + P  + YN++I+   K   +  A      M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            EGI+P  +T++TL+D +   G    A+++F  M + G  P   +YNIMIN L + +R +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   LL  M  + ++P+ VTY +L+D   +SGR   A+           N    M   G 
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL-----------NLMNEMHHRGQ 356

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               +   SL++A  ++Q   +A A+   MKE G++P + TYT L+  L +
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 407



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 2/353 (0%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   + YN +I    ++  + +A +L S+M   G   D I Y+ +I       ++  +  
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAF- 205

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L  E+    I     + N +I    K G+  +A   L +    G+ P   TY+ ++  
Sbjct: 206 -SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDG 264

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G    A+ +F  + + G+ P   +YN ++ G  K   + +A  ++ EM    ++PD
Sbjct: 265 YCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 324

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LID    +GR  SA  ++ EM       +   Y+ +L          +   +  
Sbjct: 325 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 384

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +MK  G++P  + Y  +ID   K   L +A   F  +L +G   D  T+  +I    K G
Sbjct: 385 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEG 444

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            +D A  +  +M++ G  P   T+ I+I  L E++  +  ++LL  M A+GLL
Sbjct: 445 MFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 34/383 (8%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P    +  ++ +L+   + + A ++ ++++  G++      N L+  +  +G +  +  
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RIVLKEMEVSHAKPNSFIYSRI 411
           V+ ++ + G  PD  T + L+      G  + +     ++V +  ++ H       Y  +
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVS-----YGTL 121

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           L G    GE +   ++L+ ++     P+   YN +ID   K   ++ A   +  M + GI
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD IT+ TLI      G+   A  L +EM  +   P    YNI+IN L ++   ++ K 
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-------------------LEGLS 572
           LL  M  +G+ P VVTY+TL+D Y   G   +A +                    + GL 
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 573 -----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                D+A+N  R M    + P  +  NSLI+   +  R   A  ++  M   G   DVV
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361

Query: 628 TYTTLMKALIRVDKFHKVFSSYL 650
           TYT+L+ AL +     K  + ++
Sbjct: 362 TYTSLLDALCKNQNLDKATALFM 384


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 206/466 (44%), Gaps = 17/466 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL--SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+I I  L  + +L EA  L    R    P  +TYN LI    +    ++A++ + +M  
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D   Y+ +I    + + +  +   +L K+        D      +I G    GD 
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEA--TELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+     AQ  G+ P    Y +++  L   G  + A  V  E+ E G  P  + YN +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  KMG + DA  V+++    G LPD  T++ LID Y    + +SA  +++ M     
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P++  Y+ +L G    G+     +  +EM   G  P+   YN++I+ F + N +  A  
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
              +M  EG+ PD +++NTLI    + G  + A  LF++++E+GY     T+N +I    
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            +      +++   M ++G   +  TY  L+D             C     D+A      
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLID-----------GSCKTANVDRAYMHLVE 633

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           M   G  PS      +IN+   + R  +A  ++  M + G+ P+VV
Sbjct: 634 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 167/365 (45%), Gaps = 12/365 (3%)

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  +AG   +A+R +   +   + P   TY  +I  L       EA      +   G 
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN ++ GY K+  +++A  ++ +    G +PD+ TY  LI+     G  E A  
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  E +    KP+  +Y+ ++ G   +G      QV+ EM   G  PD   YN++I+   
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A    +  + +G  PD  T+NTLID + K  + D A +L E M E G  P T 
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 469

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN ++N L +  +  +V      M  +G  PN +TY  L++ + +S + ++A + +  +
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM 529

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S +           GL P  ++ N+LI  F  +     A+ + Q ++E G      T+ T
Sbjct: 530 SQE-----------GLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNT 578

Query: 632 LMKAL 636
           L+ A 
Sbjct: 579 LIGAF 583



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 203/468 (43%), Gaps = 26/468 (5%)

Query: 188 RQRLTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFIN--YSLVIQSLTRT 241
           R RL+P T    Y A I A AR   L  A++   +M  D + C      Y+ ++ +L   
Sbjct: 44  RSRLSPATIHPLYVASIRAYARAGRLRDAVDAFERM--DLFACPPAAPAYNAIMDALVDA 101

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
              D +   K+Y  +    +  D       +  F        A+R L      G      
Sbjct: 102 AYHDQA--HKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AV 155

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  V+  L   G T +A  +F+++  + + P   A+N +L    K G + +A  ++ ++
Sbjct: 156 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 215

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G+  +  TY++ I     AGR   A  ++  M  ++A P+   Y+ ++ G   +   
Sbjct: 216 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMP 274

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q     L+ M + G  PD   YN +ID + K + +  A       + +G  PD +T+ +L
Sbjct: 275 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 334

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I+     G  +RA ELF E Q +G  P    YN ++  L  Q       +++  M  +G 
Sbjct: 335 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 394

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P++ TY  +++   + G   DA   +            +M+  G  P     N+LI+ +
Sbjct: 395 HPDIQTYNIVINGLCKMGNISDATVVMND---------AIMK--GYLPDVFTFNTLIDGY 443

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  +   A  +++ M E G+ PD +TY +++  L +  K ++V  ++
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 491


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 212/446 (47%), Gaps = 30/446 (6%)

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           V+ +L R+           ++ I   ++  +    N ++      G  + A+  L   QG
Sbjct: 173 VLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG 232

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            GLSP   TY  ++ A    G   EA A+   +K+ G+ P    YN L+  Y ++G++K 
Sbjct: 233 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQ 292

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME-VSHAKPNSFIYSRIL 412
           A  VV  M  +G  PD  TY++L      AG+ + A  +  EME +    P+   Y+ + 
Sbjct: 293 ATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLA 352

Query: 413 -AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
            A ++ R       ++L+EM+  GV+     +N++I    K   L  A+   ++M  +G+
Sbjct: 353 DACFKCRCS-SDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGL 411

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD IT+NTLI  H K G   +A  L +EM  RG    T T N ++  L +++R+E+ + 
Sbjct: 412 APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQG 471

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE------------CLEGLS 572
           LL +   +G +P+ V+Y T++  Y +          +D+ IE             ++GLS
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLS 531

Query: 573 -----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +A++    +   GL P +   N +I+A+ ++     AF     M EN  KPDVV
Sbjct: 532 RMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVV 591

Query: 628 TYTTLMKALI---RVDKFHKVFSSYL 650
           T  TLM  L    ++DK  K+F S++
Sbjct: 592 TCNTLMNGLCLNGKLDKALKLFESWV 617



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 258/620 (41%), Gaps = 93/620 (15%)

Query: 101 SALASSPSSLNRVEFKLAESYRAVPAPLWHS-------LLKNLCSSNSSIDLAYAVVSWL 153
           SALA SPS+  +      +++R++ A   H        L+   CS  +  D A + +S +
Sbjct: 175 SALARSPSTSPQASL---DAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD-ALSTLSTM 230

Query: 154 QKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDD 208
           Q   L     + Y+ L++A  R   L EA  L  R +      T  TYN L+SA AR   
Sbjct: 231 QGFGLSPD-AVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGW 289

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           +++A  ++  M  +G+  D   Y+++   L +  K+D +   K       D++E  G LL
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLK-------DEMERLGTLL 342

Query: 269 NDVIVGFAKAGDA-------SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
            DV+  +    DA       S A+R L   +  G+     T+  VI  L   G    A  
Sbjct: 343 PDVVT-YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALG 401

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV--------------- 366
              ++ + GL P    YN L+  + K G +  A  ++ EM R G+               
Sbjct: 402 CLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLC 461

Query: 367 --------------------LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
                               +PDE +Y  ++ AY      E A  +  EM      P+  
Sbjct: 462 KEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS 521

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G  +     L E+   G+ PD   YN++I  + K   L +A    ++M
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKM 581

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +    +PD +T NTL++     G+ D+A +LFE   E+G      TYN +I  + +    
Sbjct: 582 VENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDV 641

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           +       +M A+GL P+  TY  ++    ++GR ++A   L  L++    + +   +  
Sbjct: 642 DTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLS-QSFSSPL 700

Query: 587 LKPSNL-------------------------ALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           LKPS++                         A   L+N      +  EA A+L  M + G
Sbjct: 701 LKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKG 760

Query: 622 LKPDVVTYTTLMKALIRVDK 641
           +  D  TY TLM+ L++  K
Sbjct: 761 MSVDSSTYITLMEGLVKRQK 780


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 224/479 (46%), Gaps = 24/479 (5%)

Query: 175 RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           R+  L  A  L       P  ++Y  L+ A   +   ++A+ L+  MR  G   D + Y 
Sbjct: 95  RAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYG 154

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---DASKAMRFLG 289
            +I+ L    ++D ++  +L  E+    IE +  + + ++ G+ K+G   D  K   F+ 
Sbjct: 155 TLIRGLCDAAEVDKAV--ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKV--FVE 210

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           M++  G+ P    Y  +I +L   G+  +A  V + +   GL+P    YN L+    K G
Sbjct: 211 MSEK-GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEG 269

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH--AKPNSFI 407
            +K+A  V+ +M   GV PD  TY+ LI   ++    + A  +L+EM       KPN   
Sbjct: 270 SVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVT 329

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           ++ ++ G  D G  ++ FQV   M+ +G   +   YN++I    + + +  AM   D M 
Sbjct: 330 FNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMT 389

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           S G+EPD+ T++ LI    K  + DRAE+L   M++RG  P    Y  ++  + EQ   E
Sbjct: 390 SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
             + L   M     L +VV Y+T++    ++G    A E L+ + D+           GL
Sbjct: 450 RARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDE-----------GL 497

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            P  +  + +IN F +      A  VL+ M  +G  PDV  + +L++      + +KV 
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVL 556



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 212/482 (43%), Gaps = 48/482 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSW--LQKHNLCYSYELLYSILIHALGRSEKLYE---AF 183
           ++++L  LC      D A A++    L+ H  C    + Y++L+ AL  +++L +     
Sbjct: 80  YNTVLTALCRRGHH-DRAGALLRAMSLEPHPACRPNAVSYTVLMRALC-ADRLADQAVGL 137

Query: 184 LLSQRQ---RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           L S R    R   +TY  LI       +++KA+ LM +M + G   + + YS ++Q   +
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           + + +   + K++ E+    IE D  +   +I    K G A KA   + M    GL P  
Sbjct: 198 SGRWED--VGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  +I  +   G   EA  V +++ E G+ P    YN L+KG   +  + +A +++ E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 361 MERSG--VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           M R    V P+  T++ +I    + GR   A  V   ME +    N   Y+ ++ G    
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP----- 473
            + ++  +++ EM S G+EPD+  Y+++I  F K   +  A      M   GIEP     
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 474 -----------------------------DTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
                                        D + ++T+I    K G    A+EL + + + 
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P   TY+I+IN+  +    E    +L  M A G LP+V  + +L+  Y   G  +  
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 565 IE 566
           +E
Sbjct: 556 LE 557



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 157/355 (44%), Gaps = 19/355 (5%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELK---ESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +Y  V+TAL   G    A A+   +        +P   +Y  L++          A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M  +GV  D  TY  LI    +A   + A  ++ EM  S  +PN  +YS +L GY   
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G W+   +V  EM   G+EPD   Y  +ID+  K      A    D M+  G+EP+ +T+
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-R 537
           N LI+C  K G    A  + ++M E+G  P   TYN +I  L +    ++   LL  M R
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 538 AQGLL-PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            + ++ PNVVT+ +++      GR             QA     +M   G   + +  N 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRM-----------RQAFQVRAMMEETGCMVNLVTYNL 367

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
           LI       +  +A  ++  M   GL+PD  TY+ L+K   +   VD+   + S+
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 18/374 (4%)

Query: 269 NDVIVGFAKAGDASKA---MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           N V+    + G   +A   +R + +       P   +Y  ++ AL       +A  +   
Sbjct: 81  NTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRS 140

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++ +G++     Y  L++G      +  A  ++ EM  SG+ P+   YS L+  Y  +GR
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WE    V  EM     +P+  +Y+ ++      G+ ++   V+  M   G+EP+   YNV
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K   +  A+    +M  +G+ PD +T+NTLI         D A  L EEM  RG
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RG 319

Query: 506 ---YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P   T+N +I  L +  R     ++   M   G + N+VTY  L+    +  +  
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+E    L D+       M + GL+P +   + LI  F +  +   A  +L  M++ G+
Sbjct: 380 KAME----LMDE-------MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 623 KPDVVTYTTLMKAL 636
           +P++  Y  L+ A+
Sbjct: 429 EPELFHYIPLLVAM 442



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 12/381 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFL 184
           ++ SLL+  C S    D+    V   +K        ++Y+ LI +L   G+++K +    
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKG--IEPDVVMYTGLIDSLCKVGKAKKAHGVMD 244

Query: 185 LSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           +  R+ L P  +TYN LI+   +   +++A+ ++ KM + G   D + Y+ +I+ L+   
Sbjct: 245 MMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 243 KIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           ++D +  LL+++ +     K  +     N VI G    G   +A +   M +  G     
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNV--VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNL 362

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  +I  L    +  +A  + +E+   GL+P +  Y+ L+KG+ KM  +  AE ++S 
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+ P+   Y  L+ A    G  E AR +  EM+ ++   +   YS ++ G    G+
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGD 481

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +   ++LK +   G+ PD   Y+++I+ F K   +  A     +M + G  PD   +++
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 481 LIDCHFKCGRYDRAEELFEEM 501
           LI  +   G  ++  EL  EM
Sbjct: 542 LIQGYSTKGEINKVLELIREM 562



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 16/283 (5%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVS---HAKPNSFIYSRILAGYRDRGEWQRTF 425
           D  +Y+ ++ A    G  + A  +L+ M +      +PN+  Y+ ++          +  
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L+ M+S+GV  D   Y  +I        +  A+     M   GIEP+ + +++L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR++   ++F EM E+G  P    Y  +I+ L +  + +    ++  M  +GL PNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY  L++             C EG   +A+   + M   G+ P  +  N+LI    +  
Sbjct: 256 VTYNVLINCM-----------CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVL 304

Query: 606 RDAEAFAVLQYM--KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              EA  +L+ M   +N +KP+VVT+ ++++ L  + +  + F
Sbjct: 305 EMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAF 347



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 158/329 (48%), Gaps = 11/329 (3%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-F 183
           P  + +++L N      S+  A  V+  + +  +     + Y+ LI  L    ++ EA +
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV-VTYNTLIKGLSDVLEMDEAMW 311

Query: 184 LLSQRQR----LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           LL +  R    + P  +T+N++I        + +A  + + M + G   + + Y+L+I  
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L R +K+  ++  +L  E+    +E D    + +I GF K     +A   L   +  G+ 
Sbjct: 372 LLRVHKVRKAM--ELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P+   Y  ++ A+   G    A  +F E+ ++       AY+ ++ G  K G LK A+ +
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  +   G+ PD  TYS++I+ +A +G  E+A  VLK+M  S   P+  ++  ++ GY  
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           +GE  +  ++++EM +  +  D+   + +
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTL 577


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 116/510 (22%), Positives = 225/510 (44%), Gaps = 30/510 (5%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSK 218
            +Y++LI  L R +++ +A  +        L     TYN LI    +  +L+ A  +  +
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRER 271

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++     + I ++ ++  L +  K+  +  + L KE+E +    DG   + +  G  + 
Sbjct: 272 MKEKSVAPNIITFNSLLSGLCKMRKMKEA--RSLLKEMEVNGFMPDGYTYSILFDGLLRC 329

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D + AM     A   G+     T + ++  L   G+  +AE + ++  E+GL      Y
Sbjct: 330 DDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIY 389

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N  + GY ++G +  A   +  ME  G+ P+  T++ LID + +    + A   +K+M  
Sbjct: 390 NTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE 449

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ ++ GY     + R FQ+L++M+  GV+P+   Y  +I+   K   +  
Sbjct: 450 KGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILE 509

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M+  G+ P+   +N LID     G+   A   F+EM      P   TYN++I+
Sbjct: 510 AEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLID 569

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L ++ +  + +  L  + + G  P+V+TY +L+  Y  +G     +   E + +  +  
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629

Query: 579 -----------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                                  +  M    L P  +  N++I+ + E     +A+++ Q
Sbjct: 630 TVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQ 689

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            M + G+ PD +TY +L+    R  K   +
Sbjct: 690 GMLDQGIHPDKMTYNSLILGHFREGKLSNI 719



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 228/522 (43%), Gaps = 50/522 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +  +L  AF + +R +   + P  +T+N+L+S   +   +++A +L+ +M 
Sbjct: 249 YNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEME 308

Query: 221 QDGYHCDFINYSLVIQSLTR---------------------TNKIDSSLLQKLYKEIECD 259
            +G+  D   YS++   L R                      N   S LL  L K+ + +
Sbjct: 309 VNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVE 368

Query: 260 KIE------------LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           K E             D  + N  + G+ + GD +KA+  +   +  GL P + T+ ++I
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLI 428

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
               +     +AE   +++ E G+ P  + YN L+ GY K+        ++ +ME  GV 
Sbjct: 429 DKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK 488

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  +Y  LI+     G+   A IVL++M      PN+ +Y+ ++ G    G+ +   + 
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRF 548

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM  S + P    YNV+ID   K   L  A     ++ S G  PD IT+N+LI  +  
Sbjct: 549 FDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G   +   L+E M+  G  P   TY+ +I+    +E  E V++L   M    LLP+ V 
Sbjct: 609 AGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS-KEGIELVEKLYNEMLQMNLLPDRVV 667

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  ++  Y + G    A    +G+ DQ           G+ P  +  NSLI     + + 
Sbjct: 668 YNAMIHCYAEIGNTQKAYSLHQGMLDQ-----------GIHPDKMTYNSLILGHFREGKL 716

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +    ++  MK   L P   TY  L+K    +  F   +  Y
Sbjct: 717 SNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWY 758



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 147/642 (22%), Positives = 288/642 (44%), Gaps = 48/642 (7%)

Query: 32  AFSVSTITGITTATASGESSFSS-SSFTSKQNDTEEEEEDDDDVLS----LQKQRYDFTP 86
           A  +  ++ +T +T +  + F    SF++    T EE E   + LS      ++RY+   
Sbjct: 2   ANRIRLLSKVTISTRNNPNPFPVFPSFSTIP--TPEESEQTQNTLSNNSSKDQERYEQVN 59

Query: 87  LLNFLSENSNSESASALA----------SSPSSLNRVEFKLAESYRAVPAPLWHSL---L 133
            L  L + + +E+A +LA          SSPS L          + A   PL  +L   L
Sbjct: 60  KLQILLQQNCNEAAYSLAKSLILTKSTFSSPSDL-------FSCFSACSIPLRITLSDML 112

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE--KLYEAFLLSQRQ-- 189
            ++C  +  +  A  +  ++++     S   L  +    +   +  K+ + F+  +    
Sbjct: 113 LSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGF 172

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R     Y   I A  +  +L+  +  +  MR+ G   +   Y+++I  L R  +I  +  
Sbjct: 173 RTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA-- 230

Query: 250 QKLYKEIECDKIELDGQLL--NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +K++ E+ C+ I L G ++  N +I G+ K G+   A +     +   ++P   T+ +++
Sbjct: 231 EKMFDEM-CN-INLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLL 288

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           + L    +  EA ++ +E++ +G  P    Y+ L  G ++      A  +  +    G+ 
Sbjct: 289 SGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIR 348

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            + +T S+L++     G+ E A  +LK+   +    +  IY+  + GY   G+  +    
Sbjct: 349 INNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILT 408

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           ++ M+S G+ P++  +N +ID F     +  A     +M  +G+ P   T+NTLID + K
Sbjct: 409 IERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGK 468

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
              +DR  ++ E+M+E G  P   +Y  +IN L +  +  + + +L +M  +G+LPN   
Sbjct: 469 LCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQV 528

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+D     G+  DA+   +           +MR++ + P+ +  N LI+   +  + 
Sbjct: 529 YNMLIDGSCMVGKVKDALRFFD----------EMMRSE-ISPTLVTYNVLIDGLCKKGKL 577

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            EA   L  +  +G  PDV+TY +L+          K    Y
Sbjct: 578 TEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLY 619



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 182/437 (41%), Gaps = 41/437 (9%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           SIL++ L   G+ EK  E         L    + YN  ++   R  D+ KA+  + +M  
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   + I ++ +I       ++D +  ++  K++    +    +  N +I G+ K    
Sbjct: 415 FGLRPNSITFNSLIDKFCDMKEMDKA--EEWVKKMAEKGVTPSVETYNTLIDGYGKLCTF 472

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +  + L   + +G+ P   +Y ++I  L   G+ +EAE V  ++   G+ P  + YN L
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G   +G +KDA     EM RS + P   TY++LID     G+   A   L ++  S  
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP----------------------- 438
            P+   Y+ +++GY + G   +   + + MK+ G++P                       
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKL 652

Query: 439 -----------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
                      D   YN MI  + +      A +    ML +GI PD +T+N+LI  HF+
Sbjct: 653 YNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFR 712

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G+    ++L   M+ +   P   TY+I++    + + +         M     LPN   
Sbjct: 713 EGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASI 772

Query: 548 YTTLVDIYGQSGRFDDA 564
              L     Q GR  + 
Sbjct: 773 CNELTAGLEQEGRLQEV 789



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 152/348 (43%), Gaps = 3/348 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    +    ++   ++ +M + G   + ++Y  +I  L +  KI  +  + + +
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA--EIVLR 515

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++ C  +  + Q+ N +I G    G    A+RF        +SP   TY  +I  L   G
Sbjct: 516 DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG 575

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EAE    ++  SG  P    YN+L+ GY   G +     +   M+  G+ P   TY 
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI   +  G  E    +  EM   +  P+  +Y+ ++  Y + G  Q+ + + + M   
Sbjct: 636 PLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQ 694

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   YN +I    +   L +     + M ++ + P   T++ L+  H     +  A
Sbjct: 695 GIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGA 754

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              + EM E  + P  +  N +   L ++ R ++V+ +   M  +G++
Sbjct: 755 YVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 130/311 (41%), Gaps = 8/311 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  K+ EA ++ +      +      YN LI        ++ AL    +M 
Sbjct: 494 YGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +       + Y+++I  L +  K+  +  +    +I       D    N +I G+A AG+
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEA--EDFLTQITSSGHSPDVITYNSLISGYANAGN 611

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            SK +      + +G+ P   TY  +I+  S  G  +  E ++ E+ +  L P    YNA
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL-VEKLYNEMLQMNLLPDRVVYNA 670

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y ++G  + A  +   M   G+ PD+ TY+ LI  +   G+  + + ++  M+   
Sbjct: 671 MIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKE 730

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  Y  ++ G+ D  ++   +   +EM  +   P+    N +     +   L    
Sbjct: 731 LAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQ 790

Query: 461 AAFDRMLSEGI 471
                M  +GI
Sbjct: 791 VICSEMNVKGI 801



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 8/277 (2%)

Query: 165 LYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y++LI     +G+ +     F    R  ++P  +TYN LI    +   L +A + ++++
Sbjct: 528 VYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQI 587

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+  D I Y+ +I        +   L   LY+ ++   I+   +  + +I G +K G
Sbjct: 588 TSSGHSPDVITYNSLISGYANAGNVSKCL--GLYETMKNLGIKPTVRTYHPLISGCSKEG 645

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                  +  M Q + L P    Y A+I   +  G T +A ++ + + + G+ P    YN
Sbjct: 646 IELVEKLYNEMLQ-MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYN 704

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G+ + G L + + +V+ M+   + P   TY +L+  + +   +  A +  +EM  +
Sbjct: 705 SLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVEN 764

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +  PN+ I + + AG    G  Q    +  EM   G+
Sbjct: 765 NFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TY  VI+     GR  EA  VF+E+ 
Sbjct: 76  NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G +KP    YNAL+ GY   G L  A      M   GV     TY+LL+ A    GR 
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM      P+ F Y+ ++ G+   G  ++  ++ + M   GV      Y  +
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +      FD  +  GI PD + +N LI+ H   G  DRA E+  EM+++  
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ ++L+  M  +G+ P++VTY TL+  Y   G   DA+ 
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + ++ +N        G  P+ L  N+LI    ++ +  +A  +++ M ENG+ PD 
Sbjct: 376 ----IRNEMMN-------KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 424

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 425 STYISLIEGLTTEDE 439



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 5/391 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ-DG 223
           ++I++  L  + K   A  LL Q  R   +TYN +I+       ++ AL++M +MR+  G
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 103

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDAS 282
              +   Y  VI    +  ++D ++  K++ E +   +++ +  + N +I G+   G   
Sbjct: 104 IAPNQYTYGTVISGWCKVGRVDEAV--KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 161

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ +       G++   ATY  ++ AL   GR  EA  + EE+   GL P    YN L+
Sbjct: 162 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 221

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ K G +K A  +   M R GV     TY+ LI A +  G+ +    +  E      +
Sbjct: 222 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 281

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +Y+ ++  +   G   R F+++ EM+   + PD   YN ++        +  A   
Sbjct: 282 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 341

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M   GI+PD +T+NTLI  +   G    A  +  EM  +G+ P   TYN +I  L +
Sbjct: 342 IDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 401

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             + +D + ++  M   G+ P+  TY +L++
Sbjct: 402 NGQGDDAENMVKEMVENGITPDDSTYISLIE 432



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL   GR  + YE       + L P   TYN LI+   +  +++KAL +   M 
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y+ +I +L++  ++  +   KL+ E     I  D  L N +I   + +G+
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQET--DKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + +E+ + G++P    YN 
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  + +EM   G  P   TY+ LI      G+ + A  ++KEM  + 
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 420 ITPDDSTYISLIEG 433



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M       CTTT+NIM+  L    +      LL  M      PN VTY T++  + 
Sbjct: 28  LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 83

Query: 557 QSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
             GR   A++                         C  G  D+AV  F  M T G +KP 
Sbjct: 84  SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N+LI  + +  +   A      M E G+   V TY  L+ AL
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/554 (22%), Positives = 245/554 (44%), Gaps = 60/554 (10%)

Query: 129 WHSLLKNLCS---SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
           +++++K LC    S  ++DL + +V   +K   C    + Y+ +IH L R  ++ +A   
Sbjct: 193 YNTVVKTLCEDSRSQRALDLLHTMV---KKSGGCSPNVVTYNTVIHGLFREGEVSKACNL 249

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F    +Q + P  +TY ++I A  +   ++KA  ++ +M  +G+  + + Y+ +I   + 
Sbjct: 250 FHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSI 309

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           + +   +    +++E+    +  +    N  +    K G + +A  F       G  P  
Sbjct: 310 SGQWKET--AGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNL 367

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY+ ++   +  G  ++   +F  ++ +G+    + +N ++  Y K G + +   + ++
Sbjct: 368 VTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQ 427

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+  GV+PD  TY ++I A++  GR   A     +M     KP   +Y  ++ G+   G 
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487

Query: 421 WQRTFQVLKEMKSSGV------------------------------------EPDTHFYN 444
             +  +++ EM S G+                                     PD   +N
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID +G    +  A    D M+S GIEPD +++NTLID + + GR D    LF EM  +
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P T TY I+++ L    R    K++   M   G   ++ T   ++            
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGL--------- 658

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
             C     D+A+  F+ +    +K +   +N++I+A  + ++  EA  +   +   GL P
Sbjct: 659 --CRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVP 716

Query: 625 DVVTYTTLMKALIR 638
           +  TY  ++K L++
Sbjct: 717 NASTYGVMIKNLLK 730



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 216/485 (44%), Gaps = 28/485 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISA--------CARNDDLEKALNLMS 217
           Y+IL+    R+ +    F L  R   T L  + ++++          R+DD+   L  + 
Sbjct: 122 YNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLL--LH 179

Query: 218 KMRQDGYHCDFINYSLVIQSL---TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           +M + G   D I+Y+ V+++L   +R+ +    L   + K   C     +    N VI G
Sbjct: 180 RMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSP---NVVTYNTVIHG 236

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             + G+ SKA          G+ P   TY ++I AL  +    +AE V  ++  +G +P 
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN ++ GY   G  K+   +  EM   G++P+  T +  + +    G+ + A     
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M     KPN   YS +L GY   G +     +   M+ +G+  D   +N++ID +GK  
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +   M  F +M  +G+ PD  T+  +I    + GR   A + F +M   G  P    Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGL-LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            +I            K L+  M ++G+  PN+V + ++++             C EG   
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL-----------CKEGRVV 525

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A + F  +   G +P  +  NSLI+ +G   +  +AF VL  M   G++PDVV+Y TL+
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585

Query: 634 KALIR 638
               R
Sbjct: 586 DGYCR 590



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 206/483 (42%), Gaps = 63/483 (13%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TYN L+  C R         L  +  + G   D I  S++++ L    + D  +   
Sbjct: 118 TVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLL 177

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L++  E                                    +G+ P T +Y  V+  L 
Sbjct: 178 LHRMPE------------------------------------LGVEPDTISYNTVVKTLC 201

Query: 312 NSGRTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              R+  A  +   +  K  G  P    YN ++ G  + G +  A  +  EM + GV+PD
Sbjct: 202 EDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPD 261

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ +IDA   A   + A +VL++M  +  +PN   Y+ ++ GY   G+W+ T  + +
Sbjct: 262 VVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFR 321

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM S G+ P+    N  + +  K+     A   FD M ++G +P+ +T++ L+  +   G
Sbjct: 322 EMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEG 381

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +     LF  M+  G       +NI+I+  G++   ++   +   M+ QG++P+  TY 
Sbjct: 382 CFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYG 441

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
            ++  + + GR  DA++                        C+ G   +A      M + 
Sbjct: 442 IVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSR 501

Query: 586 GL-KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           G+ +P+ +  NS+IN+  ++ R  EA  +  ++   G +PDV+T+ +L+     V K  K
Sbjct: 502 GIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEK 561

Query: 645 VFS 647
            F 
Sbjct: 562 AFG 564



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 241/556 (43%), Gaps = 58/556 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLL 185
           + S++  LC + + +D A  V+  +  +      ++ Y+ +IH    S +  E    F  
Sbjct: 265 YTSIIDALCKARA-MDKAELVLRQMISNGF-QPNKVTYNCMIHGYSISGQWKETAGMFRE 322

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL-TRTN 242
              Q L P  +T N+ +S+  ++   ++A      M   G+  + + YS+++    T   
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D   +  L+  +E + I  D ++ N VI  + K G   + M      Q  G+ P   T
Sbjct: 383 FVD---MLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACT 439

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  VI A S  GR  +A   F ++   GLKP    Y++L++G+   G L  A+ +VSEM 
Sbjct: 440 YGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM 499

Query: 363 RSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             G+  P+   ++ +I++    GR   A  +   +     +P+   ++ ++ GY   G+ 
Sbjct: 500 SRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKI 559

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++ F VL  M S+G+EPD   YN +ID + +   +   +  F  MLS+G++P TIT+  +
Sbjct: 560 EKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTT----------------------------- 512
           +   F  GR   A+++  EM E G     +T                             
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNV 679

Query: 513 ------YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                  N MI+ + +  + E+ K L  ++ A GL+PN  TY  ++    +         
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLK--------- 730

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             EG  ++A N F +M   G  PS+  LN +I    E     +A   +  +    +  + 
Sbjct: 731 --EGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEA 788

Query: 627 VTYTTLMKALIRVDKF 642
            T + LM    R  K+
Sbjct: 789 STVSLLMALFSREGKY 804



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/300 (19%), Positives = 120/300 (40%), Gaps = 39/300 (13%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA----- 182
           ++HSL++  C   + +  A  +VS +    +     + ++ +I++L +  ++ EA     
Sbjct: 474 VYHSLIQGFCMHGNLVK-AKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           F++   +R   +T+N+LI        +EKA  ++  M   G   D ++Y+ +I    R  
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592

Query: 243 KIDSSLL---------------------------------QKLYKEIECDKIELDGQLLN 269
           +ID  L+                                 +K+  E+      +D     
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++ G  +     +A+        + +    A    +I A+    +  EA+ +F+ +  +
Sbjct: 653 IILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISAT 712

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P    Y  ++K  +K G +++A+ + S ME+SG  P     + +I      G    A
Sbjct: 713 GLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 15/192 (7%)

Query: 459 AMAAFDRMLSEGIEP-----DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           A+A F+R+  E   P        T+N L+DC  +  R      LF    + G        
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 514 NIMINLLGEQERWED-VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +I++  L   +R +D V  LL  M   G+ P+ ++Y T+V    +  R   A++ L  + 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTM- 216

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                   V ++ G  P+ +  N++I+    +   ++A  +   M + G+ PDVVTYT++
Sbjct: 217 --------VKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSI 268

Query: 633 MKALIRVDKFHK 644
           + AL +     K
Sbjct: 269 IDALCKARAMDK 280


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 6/400 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI    +  ++ EA  L +      L     TYN+L++A  +   +++A+ L   M 
Sbjct: 46  YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D + YS +I  L +T K+  +L    +K IE      +    N +I G  K  +
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIE-RGCSANTVAYNALINGLCKDEN 164

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A + L      G  P   TY  +++ L   G+  EA+  F+ +   G  P   AYN 
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G   +A  +  ++   G +PD  TY+ ++   A     + A  + K+M  S 
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS +L+G+    +     +VL+EM   G  PD   YN+++D   K N +  A 
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+  G  PD ++++ +++   K  +   A  LF+ M ER   P   T+NI+++ L
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
            +  + ++ K LL  M   G  P+ V Y TL++   + GR
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 175/374 (46%), Gaps = 12/374 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           V+  F K G      +        G+SP    Y  +I   +  GR  EA  ++EE+   G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESA 389
           L+P    YN+LL  + K   +K+A  +   M   G  PD  TYS +I      G+  E+ 
Sbjct: 74  LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++  +M       N+  Y+ ++ G       +R +++L+EM S G  PD   YN ++  
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +   +  A   FD M S G  PD + +N L+D  +K G+ D A +LF+++  +GY P 
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T TYN ++  L  +   ++ + +   M A G  PN  TY+ ++  + ++ + DDA + LE
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            +S             G  P  +  N L++   +     +A  +   M +NG  PD+V+Y
Sbjct: 314 EMSKI-----------GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 362

Query: 630 TTLMKALIRVDKFH 643
           + ++  L + +K H
Sbjct: 363 SVVLNGLCKTNKVH 376



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 14/413 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           + +V++S  +  K+      KL++++  + I  DG   N +I G+AK G   +A R    
Sbjct: 11  FRVVLKSFCKQGKLRDGY--KLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
              VGL P   TY +++ A     +  EA  +F+ + E G +P    Y+ ++ G  K G 
Sbjct: 69  MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128

Query: 351 LKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
           + +A E +  +M   G   +   Y+ LI+        E A  +L+EM      P++  Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            IL+G    G+     Q    M S G  PD   YN ++D   K      AM  F  ++++
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  PDT+T+N+++    +    D AEE+F++M   G  P   TY+I+++     ++ +D 
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
            ++L  M   G +P+VVTY  L+D             C   L D+A   F  M  +G  P
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGL-----------CKTNLVDKAHELFSTMVDNGCAP 357

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             ++ + ++N   +  +  +A  +   M E  L PDVVT+  LM  L +  K 
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 197/443 (44%), Gaps = 14/443 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++ +  +   L     L  +M  +G   D I Y+++I    +  ++D +   +LY+
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA--NRLYE 67

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +E      N ++  F K     +AM         G  P   TY+ +I+ L  +G
Sbjct: 68  EMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTG 127

Query: 315 RTIEA-EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           +  EA E +F ++ E G    T AYNAL+ G  K   ++ A  ++ EM   G +PD  TY
Sbjct: 128 KVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++      G+   A+     M      P+   Y+ +L      G+     ++ K++ +
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  PDT  YN ++    + + +  A   F +M++ G  P+  T++ ++  H +  + D 
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++ EEM + G  P   TYNI+++ L +    +    L   M   G  P++V+Y+ +++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++ +  DA              F  M    L P  +  N L++   +  +  EA  +
Sbjct: 368 GLCKTNKVHDARV-----------LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
           L  M  +G  PD V Y TLM  L
Sbjct: 417 LDQMTCSGCAPDYVAYNTLMNGL 439



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 177/356 (49%), Gaps = 15/356 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP   T+  V+ +    G+  +   +FE++ ++G+ P    YN L+ GY K G + +A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  EM   G+ P  +TY+ L++A+    + + A  + K M     +P+   YS I++G  
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 417 DRGEWQRTFQVL-KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
             G+     ++L  +M   G   +T  YN +I+   K   +  A    + M S+G  PD 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           IT+NT++    + G+   A++ F+ M  RGY P    YN +++ L ++ + ++  +L  +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           + A+G +P+ VTY +++    +    D+A E            F+ M   G  P+    +
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEE-----------MFKKMVASGCAPNGATYS 293

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
            +++     ++  +A  VL+ M + G  PDVVTY  L+  L +   VDK H++FS+
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 349



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 13/224 (5%)

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+ + + V++ +F K   L      F++ML  GI PD I +N LID + K GR D A  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +EEM   G  P   TYN ++N   ++ + ++   L   M  +G  P+VVTY+T++    +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +G+  +A+E L          F  M   G   + +A N+LIN   +D+    A+ +L+ M
Sbjct: 126 TGKVTEALEML----------FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
              G  PD +TY T++  L R+    KV  +  FF+      YS
Sbjct: 176 ASKGYVPDNITYNTILSGLCRM---GKVSEAKQFFDSMPSRGYS 216



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 157/333 (47%), Gaps = 26/333 (7%)

Query: 128 LWHSLLKNLCSSNSSIDLAY-AVVSWLQK-HNLCYSYELL--------------YSILIH 171
           L+H +++  CS+N+   +AY A+++ L K  N+  +Y+LL              Y+ ++ 
Sbjct: 136 LFHKMIERGCSANT---VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192

Query: 172 ALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            L R  K+ EA  F  S   R  +P  + YN L+ A  +    ++A+ L   +   GY  
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+ ++  L R + +D +  ++++K++       +G   + V+ G  +A     A +
Sbjct: 253 DTVTYNSILLGLARKSNMDEA--EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L     +G  P   TY  ++  L  +    +A  +F  + ++G  P   +Y+ +L G  
Sbjct: 311 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 370

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K   + DA  +   M    ++PD  T+++L+D    AG+ + A+ +L +M  S   P+  
Sbjct: 371 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            Y+ ++ G R +G   +  ++ + MK  G   D
Sbjct: 431 AYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 202/461 (43%), Gaps = 55/461 (11%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY +LI    +   LE+AL  + KM   G+H D   Y+ VI +L   N++         
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRL--------- 62

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                                        +A +FL       L+P   TY  +I  L   
Sbjct: 63  ----------------------------HEARKFLEEMANRNLTPNVVTYTVLIDGLCKG 94

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA A+  ++++  + P    YN+L+ G  K     +A  ++ EM  SG +PD  TY
Sbjct: 95  GRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-K 432
           + LI  +  + + + A  V +++     +P+   YS ++ G    G  +    +   M K
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S    P+T  YN +I  F +   +  AM   +RM   G  PD +T+ TL++   K  R D
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +L  +M  +G  P   T+  +++ L  + R  D   +LG MR +   P V TY T++
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D Y ++ + ++A              F +   D   P+ ++ N +I    +  R +EA  
Sbjct: 334 DGYCRANQLEEA------------RKFMLEEMD-CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           +++  +     PDVV YTT++  L R   VD+  +V+   L
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 210/465 (45%), Gaps = 29/465 (6%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +IHAL    +L+EA  FL     R LTP  +TY  LI    +   +++A+ L+SKMR
Sbjct: 49  YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +       + Y+ +I  L +  +  +S    L +E+       D      +I GF K+  
Sbjct: 109 KKCVP-TAVTYNSLISGLCKAER--ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYN 339
           +  A+R        G  P   TY+ +I  L   GR  EA  +F  + +SG   P T  YN
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G+ +MG + +A  ++  M  +G  PD  TY+ L++ +    R + A  +L +M   
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   ++ ++ G            +L EM+     P  + YN ++D + + N L  A
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345

Query: 460 MAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                 ML E    P+ +++N +I    K  R   A EL EE + R   P    Y  +I+
Sbjct: 346 RKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402

Query: 519 LLGEQERWEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            L  +++ ++  R+   M  + G LPN +TY+TLV     +G  D A   +E        
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE-------- 454

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                   G  P+    N LI+AF +  RD +A  +L  M + G 
Sbjct: 455 -------KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 189/422 (44%), Gaps = 22/422 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +  L+  LC     +D A A++S ++K   C    + Y+ LI  L ++E+  EA+ L + 
Sbjct: 84  YTVLIDGLCKG-GRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEAYDLLEE 140

Query: 189 QRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +       TY  LI+   ++   + AL +  ++   G+  D + YS +I  L +  +
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR 200

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +  L  ++ K   C     +    N +I GF + G   +AM  L      G SP   
Sbjct: 201 LKEAIDLFGRMIKSGSCMP---NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++       R  +A  +  ++   GL P    + +L+ G  +   L DA  ++ EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESAR-IVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            R    P  +TY+ ++D Y  A + E AR  +L+EM+     PN   ++ ++ G      
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNR 374

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWN 479
                ++++E +     PD   Y  +ID   +   +  A   + +ML E G  P++IT++
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TL+      G  DRA    E    +G  P   TYN++I+   +  R ED + LL +M  +
Sbjct: 435 TLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490

Query: 540 GL 541
           G 
Sbjct: 491 GF 492


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 248/529 (46%), Gaps = 35/529 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           + S++  LC  +  +D A  +V  ++   +    +  +S LI     + K+ EA      
Sbjct: 84  YTSVVDGLCR-DGKMDRACEMVREMKLKGV-EPDKFTFSALITGWCNARKVDEALKLYKE 141

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM--RQDG-YHCDFINYSLVIQSLTR 240
           +L+   RL  ++ +ALI+   R   + +A  L  +M  R+DG +  D + Y+ +I    +
Sbjct: 142 ILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCK 201

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +  ++ ++  K+   +E  K   +    + ++ G  KAGD  +A+         G  P  
Sbjct: 202 SGNLEKAM--KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 259

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  +I  L  + +   A  + +E+  +     T +YNALL GY ++G +++A+ +  E
Sbjct: 260 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE 319

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRG 419
           M     LPD  TY+ L+  + NA R E AR +L+ M+ +    P+   YS ++AGY    
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 379

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
            +    + ++EM +  V P+   Y+ +ID   K   ++HAM     +L    +PD +T+ 
Sbjct: 380 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM----EVLKNVDKPDVVTYT 435

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +I+      R + A  L EEM  +   P   T+N +I  L      ++  +LL  M A 
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS---NL---- 592
           GL P +VTYTTL++ + ++GR + A E            F VMR    K S   NL    
Sbjct: 496 GLEPGMVTYTTLLEGFSRTGRMEIAYE-----------LFEVMRRKAKKSSSAANLVPEQ 544

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A ++LI    + +   +A AV++ ++    +P       ++  L+R  +
Sbjct: 545 AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 593



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 245/538 (45%), Gaps = 31/538 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           ++ ++  LC +  +   AY V+  ++         + YS +I+   +  ++  A  + + 
Sbjct: 12  YNVVVNGLCKARLT-SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 188 ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              R  + P  +TY +++    R+  +++A  ++ +M+  G   D   +S +I       
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA---GDASKAMRFLGMAQGVGLSPK 299
           K+D +L  KLYKEI      LD    + +I G  +    G+A +  + + M +     P 
Sbjct: 131 KVDEAL--KLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPD 188

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A+I     SG   +A  +   ++     P    Y++LL G  K G L  A  +  
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 248

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G +P+  TY+ LI     A + ++AR+++ EM  +    ++  Y+ +L GY   G
Sbjct: 249 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLG 308

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTITW 478
             +   Q+ KEM +    PD   Y  ++  F   + L  A    + M  + GI+PD +T+
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 368

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + ++  + +  R+  A E  +EM  R   P   TY+ +I+ L +  R      +L N+  
Sbjct: 369 SIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
               P+VVTYT +++    + R ++A+  LE + ++ V           +PS    NS+I
Sbjct: 429 ----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV-----------EPSVGTFNSVI 473

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
            A        EA+ +L  M  +GL+P +VTYTTL++   R  +      +Y  F + +
Sbjct: 474 GALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME---IAYELFEVMR 528



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 23/459 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKL 252
           TYN +++   +     KA  ++ +MR DG     D + YS VI    +  ++D +  + L
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGEMDRAC-EIL 68

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            + +  D +  D      V+ G  + G   +A   +   +  G+ P   T++A+IT   N
Sbjct: 69  REMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCN 128

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER---SGVLPD 369
           + +  EA  +++E+  S  +    + +AL+ G  +   + +A  +  EME        PD
Sbjct: 129 ARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPD 188

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LID +  +G  E A  +L  ME     PN   YS +L G    G+  +   + +
Sbjct: 189 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 248

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M S G  P+   Y  +I      + +  A    D M +     DT+++N L+D + + G
Sbjct: 249 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLG 308

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVTY 548
           R + A++LF+EM  +   P   TY  ++       R E+ + LL NM+ A G+ P+VVTY
Sbjct: 309 RIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 368

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           + +V  Y ++ RF +A E ++ +  + V            P+ +  +SLI+   +  R  
Sbjct: 369 SIVVAGYSRAKRFVEAAEFIQEMIARNV-----------APNAVTYSSLIDGLCKAGRVN 417

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            A  VL+    N  KPDVVTYT +++ L   D+  +  +
Sbjct: 418 HAMEVLK----NVDKPDVVTYTIVIEGLCGTDRTEEALT 452



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 174/424 (41%), Gaps = 54/424 (12%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +S   EK  +   + + ++  P  +TY++L+    +  DL++AL+L  +M 
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I  L   +K+D++ L  L  E+       D    N ++ G+ + G 
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARL--LMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYN 339
             +A +           P   TY  ++    N+ R  EA  + E +K  +G+ P    Y+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ GY +     +A   + EM    V P+  TYS LID    AGR   A  VLK ++  
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-- 427

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+   Y+ ++ G       +    +L+EM +  VEP    +N +I    +   +  A
Sbjct: 428 --KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY---------------------------- 491
                 M + G+EP  +T+ TL++   + GR                             
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA 545

Query: 492 --------------DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
                         D+A  + EE++ R   P       +++ L    R E+  +L+ ++ 
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605

Query: 538 AQGL 541
             GL
Sbjct: 606 KVGL 609



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 19/296 (6%)

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEW 421
           R  V P+E TY+++++    A     A  VLKEM +     P+   YS ++ G+  +GE 
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 422 QRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            R  ++L+EM +  G+ PD   Y  ++D   +   +  A      M  +G+EPD  T++ 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG--NMRA 538
           LI       + D A +L++E+          + + +I  L  + R  +   L     MR 
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 539 QGLL-PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            G   P+VVTYT L+D + +SG  + A++ L            VM      P+ +  +SL
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLG-----------VMEGRKCVPNVVTYSSL 230

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
           ++   +     +A  + + M   G  P+VVTYTTL+  L      HKV ++ L  +
Sbjct: 231 LHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA---HKVDAARLLMD 283



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 174/426 (40%), Gaps = 58/426 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + +L+   C S + ++ A  ++  ++    C    + YS L+H L ++  L +A  L +R
Sbjct: 192 YTALIDGFCKSGN-LEKAMKMLGVMEGRK-CVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +   P  +TY  LI        ++ A  LM +M       D ++Y+ ++    R  +
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL--GMAQGVGLSPKTA 301
           I+ +  ++L+KE+       D      ++ GF  A    +A RFL   M    G+ P   
Sbjct: 310 IEEA--KQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVV 366

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY+ V+   S + R +EA    +E+    + P    Y++L+ G  K G +  A  V+  +
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           ++    PD  TY+++I+      R E A  +L+EM     +P+   ++ ++      G+ 
Sbjct: 427 DK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN--------------------------- 454
              +++L  M + G+EP    Y  +++ F +                             
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP 542

Query: 455 -----------C----LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
                      C    +  AMA  + + S   EP       ++D   + GR + A +L  
Sbjct: 543 EQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLIN 602

Query: 500 EMQERG 505
            + + G
Sbjct: 603 SISKVG 608



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 29/209 (13%)

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMINLLGEQER 525
           + E + P+  T+N +++   K     +A E+ +EM++ +   P   TY+ +IN   +Q  
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 526 WEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIEC-----LEGLS------- 572
            +    +L  M  + G+ P+VVTYT++VD   + G+ D A E      L+G+        
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 573 ------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ--YMK 618
                       D+A+  ++ + T   +   ++ ++LI     ++R  EA+ + Q   M+
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 619 ENGL-KPDVVTYTTLMKALIRVDKFHKVF 646
           E+G  KPDVVTYT L+    +     K  
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAM 209



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 16/216 (7%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A  + SL+  LC +   ++ A  V+  + K ++     + Y+I+I  L  +++  EA  L
Sbjct: 400 AVTYSSLIDGLCKAGR-VNHAMEVLKNVDKPDV-----VTYTIVIEGLCGTDRTEEALTL 453

Query: 186 SQR---QRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            +    +R+ P   T+N++I A  R  D+++A  L+  M   G     + Y+ +++  +R
Sbjct: 454 LEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 513

Query: 241 TNKIDSS-----LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           T +++ +     ++++  K+       +  Q  + +I G  KA +  KAM  +   +   
Sbjct: 514 TGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRE 573

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
             P      A++  L  +GRT EA  +   + + GL
Sbjct: 574 CEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 202/461 (43%), Gaps = 55/461 (11%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY +LI    +   LE+AL  + KM   G+H D   Y+ VI +L   N++         
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRL--------- 62

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                                        +A +FL       L+P   TY  +I  L   
Sbjct: 63  ----------------------------HEARKFLEEMANRNLTPNVVTYTVLIDGLCKG 94

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA A+  ++++  + P    YN+L+ G  K     +A  ++ EM  SG +PD  TY
Sbjct: 95  GRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-K 432
           + LI  +  + + + A  V +++     +P+   YS ++ G    G  +    +   M K
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S    P+T  YN +I  F +   +  AM   +RM   G  PD +T+ TL++   K  R D
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +L  +M  +G  P   T+  +++ L  + R  D   +LG MR +   P V TY T++
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D Y ++ + ++A              F +   D   P+ ++ N +I    +  R +EA  
Sbjct: 334 DGYCRANQLEEA------------RKFMLEEMD-CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           +++  +     PDVV YTT++  L R   VD+  +V+   L
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/465 (27%), Positives = 210/465 (45%), Gaps = 29/465 (6%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +IHAL    +L+EA  FL     R LTP  +TY  LI    +   +++A+ L+SKMR
Sbjct: 49  YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +       + Y+ +I  L +  +  +S    L +E+       D      +I GF K+  
Sbjct: 109 KKCVP-TAVTYNSLISGLCKAER--ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYN 339
           +  A+R        G  P   TY+ +I  L   GR  EA  +F  + +SG   P T  YN
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G+ +MG + +A  ++  M  +G  PD  TY+ L++ +    R + A  +L +M   
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   ++ ++ G            +L EM+     P  + YN ++D + + N L  A
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345

Query: 460 MAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                 ML E    P+ +++N +I    K  R   A EL EE + R   P    Y  +I+
Sbjct: 346 RKF---MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402

Query: 519 LLGEQERWEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            L  +++ ++  R+   M  + G LPN +TY+TL+     +G  D A   +E        
Sbjct: 403 GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE-------- 454

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                   G  P+    N LI+AF +  RD +A  +L  M + G 
Sbjct: 455 -------KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 189/422 (44%), Gaps = 22/422 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +  L+  LC     +D A A++S ++K   C    + Y+ LI  L ++E+  EA+ L + 
Sbjct: 84  YTVLIDGLCKG-GRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKAERASEAYDLLEE 140

Query: 189 QRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +       TY  LI+   ++   + AL +  ++   G+  D + YS +I  L +  +
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGR 200

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +  L  ++ K   C     +    N +I GF + G   +AM  L      G SP   
Sbjct: 201 LKEAIDLFGRMIKSGSCMP---NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++       R  +A  +  ++   GL P    + +L+ G  +   L DA  ++ EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESAR-IVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
            R    P  +TY+ ++D Y  A + E AR  +L+EM+     PN   ++ ++ G      
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNR 374

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWN 479
                ++++E +     PD   Y  +ID   +   +  A   + +ML E G  P++IT++
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLI      G  DRA    E    +G  P   TYN++I+   +  R ED + LL +M  +
Sbjct: 435 TLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490

Query: 540 GL 541
           G 
Sbjct: 491 GF 492


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 23/503 (4%)

Query: 144 DLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           DL  A+V  L K+ L    +SY L+Y  +    G  +K +  FL    Q + P  L  N+
Sbjct: 173 DLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD--GEVDKAHCLFLEMMEQGVLPKILICNS 230

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +  +++KA +++ KM   G   D   YSL+I  L ++  +D +  +++ +++  
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA--ERVLEQMVE 288

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G++ +G  ++++R        G+ P      + I AL   GRT E
Sbjct: 289 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 348

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKM--GYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           A+ +F+ +   G KP   +Y+ +L GY       L D   + + M   G+ P++H +++L
Sbjct: 349 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 408

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+AYA  G  + A ++ ++M+     P++  ++ +++     G           M   GV
Sbjct: 409 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 468

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDRAE 495
            P    Y  +I     +  L  A      M+++ I P  + + +++I+   K GR    +
Sbjct: 469 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 528

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++ + M + G  P   T+N ++         E+   LL  M + G+ PN   Y TLVD Y
Sbjct: 529 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 588

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++GR DDA+             FR M   G+KP+++  + +++   + +R   A  +  
Sbjct: 589 CKNGRIDDAL-----------TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 637

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M E+G    + TY  ++  L R
Sbjct: 638 EMIESGTTVSIHTYGVVLGGLCR 660



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 217/506 (42%), Gaps = 59/506 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R    +  L ++ ++ ++G   D  +YSL I    +  ++D +    L+ 
Sbjct: 158 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKA--HCLFL 214

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +     + N +I    K  +  KA   +      G++P   TY+ +I  L  S 
Sbjct: 215 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 274

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +AE V E++ E+G +P +  YN+L+ GY   G   ++  V  +M   GV+P     +
Sbjct: 275 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 334

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE--WQRTFQVLKEMK 432
             I A    GR   A+ +   M +   KP+   YS +L GY    +        +   M 
Sbjct: 335 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 394

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ P+ H +N++I+ + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR D
Sbjct: 395 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 454

Query: 493 RAEELFEEMQERGYFPCTTTYNIM------------------------------------ 516
            A   F  M + G  P    Y  +                                    
Sbjct: 455 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 514

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN L ++ R  + K ++  M   G  PNVVT+ +L++ Y           CL G  ++A 
Sbjct: 515 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY-----------CLVGNMEEAF 563

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M + G++P+     +L++ + ++ R  +A  V + M   G+KP  V Y+ ++  L
Sbjct: 564 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 623

Query: 637 IRVDK-------FHKVFSSYLFFNIY 655
            +  +       FH++  S    +I+
Sbjct: 624 FQARRTTAAKKMFHEMIESGTTVSIH 649



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 10/383 (2%)

Query: 166 YSILIHALGRS-----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           YS ++H    +       ++  F L   + + P    +N LI+A AR   ++KA+ +   
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   D + ++ VI SL R  ++D +L  K    ++   +     +   +I G    
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDAL-HKFNHMVDIG-VPPSEAVYGCLIQGCCNH 485

Query: 279 GDASKAMRFLGMAQGVGLSPKTATY-AAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           G+  KA   +       + P    Y +++I  L   GR  E + + + + ++G +P    
Sbjct: 486 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 545

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N+L++GY  +G +++A  ++  M   G+ P+ + Y  L+D Y   GR + A  V ++M 
Sbjct: 546 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 605

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP S +YS IL G           ++  EM  SG     H Y V++    + NC  
Sbjct: 606 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 665

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    +++ +  ++ D IT+N +I   FK GR   A+ELF+ +   G  P   TY++MI
Sbjct: 666 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 725

Query: 518 NLLGEQERWEDVKRLLGNMRAQG 540
             L ++E +E+   L  ++   G
Sbjct: 726 TNLIKEESYEEADNLFISVEKSG 748



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 5/379 (1%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYK 254
           N+ I A  ++    +A  +   M   G   D I+YS ++         DS L  +  ++ 
Sbjct: 334 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT--DSCLADVHNIFN 391

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    I  +  + N +I  +A+ G   KAM      Q  G+ P T T+A VI++L   G
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY- 373
           R  +A   F  + + G+ P    Y  L++G    G L  A+ ++SEM    + P    Y 
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 511

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+     GR    + ++  M  +  +PN   ++ ++ GY   G  +  F +L  M S
Sbjct: 512 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 571

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+EP+ + Y  ++D + K   +  A+  F  ML +G++P ++ ++ ++   F+  R   
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 631

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++F EM E G      TY +++  L      ++   LL  + A  +  +++T+  ++ 
Sbjct: 632 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 691

Query: 554 IYGQSGRFDDAIECLEGLS 572
              + GR  +A E  + +S
Sbjct: 692 AMFKVGRRQEAKELFDAIS 710



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  HTY++LID Y    R +    ++  +  +   P+ F YS ++ G+   GE  +   +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM   GV P     N +I    K   +  A +   +M+  GI PD  T++ +ID   K
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               D+AE + E+M E G  P + TYN +I+       W +  R+   M + G++P V  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 548 YTTLVDIYGQSGRFDDAIEC------LEGLSDQAV---------------------NAFR 580
             + +    + GR ++A +C      L+G     +                     N F 
Sbjct: 333 CNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV- 639
           +M T G+ P+    N LINA+       +A  + + M+  G+ PD VT+ T++ +L R+ 
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451

Query: 640 ---DKFHK 644
              D  HK
Sbjct: 452 RLDDALHK 459


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 213/487 (43%), Gaps = 66/487 (13%)

Query: 165 LYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +++ LIH L   G  ++  + F   +  R+ P   TYN +IS   ++ +LEKA  L+ +M
Sbjct: 99  IFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEM 158

Query: 220 RQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + G     D + Y+ +I +                                    G  K
Sbjct: 159 IRRGGKSAPDIVTYNTLINA------------------------------------GICK 182

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            GD  +A+  L   +  G +P   TY ++I AL  +GR +EA    E LK     P    
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAA---EILKTMSCSPDLVT 239

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N LL G+ K G L  A  V+ EM R  +LPD  TY++L++     G+ + A  +L+E+ 
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK---------SSGVEPDTHFYNVMID 448
                P+   Y+ ++ G    GE +   +++KEM          S  + P    YN+++ 
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A++    +++ G  PD +T+NTLID   K  R   A +L +EM   G FP
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T   ++  L    R +D   L+  M  +   PNVV YT+L+D   +S R DDA   L
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           +            MR  G+   + A   LI +     R AEA A+   M   G  PD  T
Sbjct: 480 DA-----------MRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528

Query: 629 YTTLMKA 635
             TL +A
Sbjct: 529 SKTLEEA 535



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 214/460 (46%), Gaps = 28/460 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+    ++    +   +   +   G   + + + ++I+   +  +   +L  +  +
Sbjct: 29  SYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRAL--EFLR 86

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++   +  D  + N +I G  K G+  +A++     +   ++P   TY  VI+ L  SG
Sbjct: 87  ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSG 146

Query: 315 RTIEAEAVFEELKESGLK--PRTKAYNALLK-GYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              +A  + EE+   G K  P    YN L+  G  K G +++A  ++  M+ +G  PD  
Sbjct: 147 NLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVI 206

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ +I A   AGR   A  +LK M  S   P+   ++ +L G+   G   R  +VL+EM
Sbjct: 207 TYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEM 263

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
               + PD   Y ++++   +   +  A    + ++ +G  PD I + +L+D   K G  
Sbjct: 264 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 323

Query: 492 DRAEELFEEMQER---------GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           + A +L +EM  R            P   TYNI++  L +         L+ ++ A+G +
Sbjct: 324 EEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 383

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+VVTY TL+D   ++ R  +A +    L+D+       M + G  P+++ L S++    
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACD----LADE-------MASLGCFPNDVTLGSVVFGLC 432

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              R  +A++++  M      P+VV YT+L+  L + D+ 
Sbjct: 433 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 37/378 (9%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  ++  L  SG       V+++L  SG  P    +  L++G  K G    A   +  +
Sbjct: 29  SYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRAL 88

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +   V PD + ++ LI      G  + A  + + ME S   P+ F Y+ +++G    G  
Sbjct: 89  DEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNL 148

Query: 422 QRTFQVLKEMKSSGVE--PDTHFYNVMIDT--------------------------FGKY 453
           ++  ++L+EM   G +  PD   YN +I+                              Y
Sbjct: 149 EKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITY 208

Query: 454 NCLHHAMAAFDRMLSEG-------IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           N + HA+    R++            PD +T+NTL+D   K G   RA E+ EEM     
Sbjct: 209 NSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 268

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY I++N L    + +    LL  +  QG +P+V+ YT+LVD   +SG  ++A +
Sbjct: 269 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            ++ +S + + A   M +  + P     N ++    +D   ++A +++  +   G  PDV
Sbjct: 329 LVKEMSAREILA--EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV 386

Query: 627 VTYTTLMKALIRVDKFHK 644
           VTY TL+  L + ++  +
Sbjct: 387 VTYNTLIDGLCKANRVRE 404



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 19/298 (6%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E+ G   D H+Y+ L+D    +G       V K++  S   PN   +  ++ G    G+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            R  + L+ +    V PD + +N +I    K      A+  F+ M S  + PD  T+NT+
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 482 IDCHFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINL-LGEQERWEDVKRLLGNMRA 538
           I    K G  ++A EL EEM  RG    P   TYN +IN  + +    E+   +L  M+ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G  P+V+TY +++     +GR               V A  +++T    P  +  N+L+
Sbjct: 199 AGPAPDVITYNSIIHALCVAGR--------------VVEAAEILKTMSCSPDLVTFNTLL 244

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           + F +      A  VL+ M    + PDV+TYT L+  L RV +    F  YL   I +
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF--YLLEEIVR 300



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 20/325 (6%)

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           ++ G K    +YN LL   VK G+      V  ++  SG  P+  T+ +LI     AG+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A   L+ ++     P+ +I++ ++ G    G   +  ++ + M+SS V PD   YN +
Sbjct: 79  TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITWNTLIDCHF-KCGRYDRAEELFEEMQE 503
           I    K   L  A    + M+  G +  PD +T+NTLI+    K G  + A E+ + M+ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P   TYN +I+ L    R  +   +L  M      P++VT+ TL+D + ++G    
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPR 255

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E LE            M  + + P  +    L+N      +   AF +L+ +   G  
Sbjct: 256 ALEVLEE-----------MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 624 PDVVTYTTLMKALIR---VDKFHKV 645
           PDV+ YT+L+  L +   +++ HK+
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKL 329


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 245/534 (45%), Gaps = 21/534 (3%)

Query: 115 FKLAESYRAVPAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           F+  +  + VP   +++ L+  LC      D A  +   +   NL     + ++ LI   
Sbjct: 89  FETMKRRKVVPNVFVYNVLIGGLCKEKRIRD-AEKLFGEMSVRNL-VPNRVTFNTLIDGY 146

Query: 174 GRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            ++ ++  A  L +R   +++ P  +T+N+L+S   +   +E+A  ++++++ +G+  D 
Sbjct: 147 CKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDG 206

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
             YS++   L +++    + L  LY+E     +++D    + ++ G  K G   KA   L
Sbjct: 207 FTYSIIFDGLLKSDDGAGAALD-LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 GL P    Y  ++      G    A    E+++  GL+P   A+N+++  + +M
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
             +  AE  V +M   G+ P   TY++LID Y     +     +L+EME +  KPN   Y
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISY 385

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
             ++      G+      VL++M   GV P+ + YN++ID       L  A+  FD M  
Sbjct: 386 GSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSK 445

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            GI    +T+N+LI    K G+   AEE+F  +   G+ P   TYN +I+        + 
Sbjct: 446 NGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQK 505

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L   M+  GL P + T+  L+     SG   + I+  E L       F  M    L 
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLI-----SGCSKEGIKLKETL-------FNEMLQMNLS 553

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           P  +  N++I+ + E     +AF++ + M + G++PD  TY +L+   ++  K 
Sbjct: 554 PDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKL 607



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 207/461 (44%), Gaps = 14/461 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   L Y   + A  +  DL+ A+ L   M++     +   Y+++I  L +  +I  +  
Sbjct: 63  RPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA-- 120

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           +KL+ E+    +  +    N +I G+ KAG+   A+      +   + P   T+ ++++ 
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF-VVSEMERSGVLP 368
           L  + R  EA  +  E+K +G  P    Y+ +  G +K      A   +  E    GV  
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D +T S+L++     G+ E A  VLK +      P   IY+ I+ GY   G+  R    +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M+S G+ P+   +N +ID F +   +  A     +M+ +GI P   T+N LID + + 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
             + R  ++ EEM+E G  P   +Y  +IN L +  +  + + +L +M  +G+LPN   Y
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L+D             C  G   +A+  F  M  +G+  + +  NSLI    +  +  
Sbjct: 421 NMLIDG-----------SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           EA  +   +   G  PDV+TY +L+          K    Y
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELY 510



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 198/450 (44%), Gaps = 16/450 (3%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+S C+ +    +   L   MRQ+G    F    ++++SL  + K D+ L   L+KE+  
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVL--DLFKEMVG 59

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                D  +    ++   K GD   AM      +   + P    Y  +I  L    R  +
Sbjct: 60  LGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD 119

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           AE +F E+    L P    +N L+ GY K G +  A  +   M++  V P   T++ L+ 
Sbjct: 120 AEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLS 179

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY--RDRGEWQRTFQVLKEMKSSGV 436
               A R E AR +L E++ +   P+ F YS I  G    D G       + +E    GV
Sbjct: 180 GLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA-ALDLYREAIGKGV 238

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           + D +  +++++   K   +  A      ++  G+ P  + +NT+++ + + G  DRA  
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             E+M+ RG  P    +N +I+   E +  +  +  +  M  +G+ P+V TY  L+D YG
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG 358

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           +   F    + LE            M  +G KP+ ++  SLIN   +D +  EA  VL+ 
Sbjct: 359 RLCVFSRCFQILEE-----------MEENGEKPNVISYGSLINCLCKDGKILEAEMVLRD 407

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           M   G+ P+   Y  L+     V K  +  
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREAL 437



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 163/371 (43%), Gaps = 18/371 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P       ++ +L  S +      +F+E+   G +P    Y   +   VK+G LK A
Sbjct: 26  GRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLA 85

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M+R  V+P+   Y++LI       R   A  +  EM V +  PN   ++ ++ G
Sbjct: 86  MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y   GE      + + MK   VEP    +N ++    K   +  A    + +   G  PD
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205

Query: 475 TITWNTLIDCHFKCGR-YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
             T++ + D   K       A +L+ E   +G      T +I++N L ++ + E  + +L
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            ++   GL+P  V Y T+V+ Y Q G  D AI  +E            M + GL+P+ +A
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQ-----------MESRGLRPNCIA 314

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            NS+I+ F E Q   +A   ++ M   G+ P V TY  L+    R+  F + F       
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQ------ 368

Query: 654 IYKMLSYSGEK 664
           I + +  +GEK
Sbjct: 369 ILEEMEENGEK 379



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 4/360 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R     +   ++ +M ++G   + I+Y  +I  L +  KI  +  + + +
Sbjct: 349 TYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA--EMVLR 406

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +  +  + N +I G    G   +A+RF       G+     TY ++I  L   G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EAE +F  +  +G  P    YN+L+ GY   G  +    +   M++ G+ P  +T+ 
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI   +  G  +    +  EM   +  P+  +Y+ ++  Y++ G  Q+ F + KEM   
Sbjct: 527 PLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV PD   YN +I    K   L       D M ++G+ P+  T++ LI  H     ++ A
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGA 645

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
              + EM E G+ P     N +   L +  R ++ + +   M A G + N+ T   L D+
Sbjct: 646 YVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG-MDNLDTNEDLSDV 704



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 144/312 (46%), Gaps = 8/312 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTPLT--YNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ L +  K+ EA ++ +    + + P    YN LI        L +AL    +M 
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMS 444

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G     + Y+ +I+ L +  K+  +  ++++  I       D    N +I G++ AG+
Sbjct: 445 KNGIGATIVTYNSLIKGLCKMGKLKEA--EEMFFLITSTGHCPDVITYNSLISGYSNAGN 502

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + K +      + +GL P   T+  +I+  S  G  ++ E +F E+ +  L P    YNA
Sbjct: 503 SQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNA 561

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y + G+++ A  +  EM   GV PD  TY+ LI  +   G+    + ++ +M+   
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKG 621

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P +  YS ++ G+ D  ++   +   +EM  +G  P+    N +     K   L  A 
Sbjct: 622 LIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQ 681

Query: 461 AAFDRMLSEGIE 472
           +    M++ G++
Sbjct: 682 SICSEMIANGMD 693



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 8/278 (2%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y++LI       KL EA              T +TYN+LI    +   L++A  +   +
Sbjct: 419 IYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+  D I Y+ +I   +  N  +S    +LY+ ++   ++      + +I G +K G
Sbjct: 479 TSTGHCPDVITYNSLISGYS--NAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              K   F  M Q + LSP    Y A+I     +G   +A ++ +E+ + G++P  K YN
Sbjct: 537 IKLKETLFNEMLQ-MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYN 595

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+ G++K G L + + +V +M+  G++P+  TYSLLI  + +   +  A +  +EM  +
Sbjct: 596 SLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLEN 655

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
              PN  I + +  G R  G  Q    +  EM ++G++
Sbjct: 656 GFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 242/528 (45%), Gaps = 74/528 (14%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMS 217
           +++YSI++  L +++K+++A  L  + R +      +TYN L++   ++  L+ A  L+ 
Sbjct: 233 QIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQ 292

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGF 275
            + +DG+    I Y  +I  L R  + + + +  QK+ +E     I+ D  L   +I G 
Sbjct: 293 LLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE----NIKPDVMLYTIMIRGL 348

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
           ++ G  ++A+  LG     GL P T  Y A+I    + G   EAE++  E+ +    P  
Sbjct: 349 SQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNN 408

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             Y+ L+ G  K G +  A+ +  EME+ G LP   T++ LI+    A R E AR++  +
Sbjct: 409 HTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468

Query: 396 MEVSHAKPNSFI--------------YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           ME+   KP+ F+                 ++    + G   + +++L ++  SGV PD  
Sbjct: 469 MEIVR-KPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIR 527

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN++I+ F K+  ++ A   F  M  +G  PD++T+ TLID  ++ GR + A E+FE+M
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587

Query: 502 QERGYFPCTTTY-----------NIMINL------LGEQERWEDVK-RLLGNMRAQGLLP 543
            ++G  P ++TY           NI + L      L +   WED K R++        L 
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQ 647

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
             +     +DI  +S  FD                        L P  + L  L+ A   
Sbjct: 648 TAIRRLLEMDI--KSKNFD------------------------LAPYTIFLIGLVQA--- 678

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLF 651
            +RD EAFA+   +K+  +     +   L+  L  V+        +LF
Sbjct: 679 -KRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLF 725



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 203/485 (41%), Gaps = 48/485 (9%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +S+LI A    G  EK  E+F L +     P    +N ++    R +    AL + ++M 
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQML 190

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +   + D + Y ++I  L +T K                          D +V F +  D
Sbjct: 191 KCNLNPDVVTYGILIHGLCKTCKT------------------------QDALVLFDEMTD 226

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                         G+ P    Y+ V++ L  + +  +A+ +F +++ SG       YN 
Sbjct: 227 R-------------GILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G+ K GYL DA  ++  + + G +     Y  LI+    A R+E A +  ++M   +
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  +Y+ ++ G    G       +L EM   G+ PDT  YN +I  F     L  A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           +    +      P+  T++ LI    K G  ++A+ +F+EM++ G  P   T+N +IN L
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 521 GEQERWEDVKRLLGNM---RAQGLLPNVVTYTTLV-DIYGQSGRFDDAIECLEGLSDQAV 576
            +  R E+ + L   M   R   L   +   T  V DI       +    C  G+  +A 
Sbjct: 454 CKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERL--CESGMILKAY 511

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                +   G+ P     N LIN F +      AF + + M+  G  PD VTY TL+  L
Sbjct: 512 KLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571

Query: 637 IRVDK 641
            R  +
Sbjct: 572 YRAGR 576



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 187/454 (41%), Gaps = 39/454 (8%)

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           L+I  L + N  +  L  K+ +E++   I++  +  + +I  +++AG   KA+   G+ +
Sbjct: 98  LIIGKLIKENAFE--LYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMR 155

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
                P    +  ++  L      + A AV+ ++ +  L P    Y  L+ G  K    +
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQ 215

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  +  EM   G+LP++  YS+++     A +   A+ +  +M  S    +   Y+ +L
Sbjct: 216 DALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLL 275

Query: 413 AGYRDRGEWQRTFQVLKEMKSSG-----------------------------------VE 437
            G+   G     F +L+ +   G                                   ++
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y +MI    +   +  A+     M   G+ PDTI +N LI      G  D AE L
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             E+ +   FP   TY+I+I  + +       + +   M   G LP+VVT+ +L++   +
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGL-KPSNLA-LNSLINAFGEDQRDAEAFAVLQ 615
           + R ++A      +      +  +  + G  K  ++A L  ++    E     +A+ +L 
Sbjct: 456 ANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLM 515

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            + ++G+ PD+ TY  L+    +    +  F  +
Sbjct: 516 QLVDSGVLPDIRTYNILINGFCKFGNINGAFKLF 549



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/230 (19%), Positives = 93/230 (40%), Gaps = 24/230 (10%)

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +++I    K N           + +  I+  +  ++ LI+ + + G  ++A E F  M++
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P    +N++++ L  +E +     +   M    L P+VVTY  L+    ++ +  D
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 564 AIECLEGLSDQAV------------------------NAFRVMRTDGLKPSNLALNSLIN 599
           A+   + ++D+ +                          F  MR  G     +  N L+N
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            F +     +AF +LQ + ++G    V+ Y  L+  L R  ++ +    Y
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 217/465 (46%), Gaps = 43/465 (9%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           Q   +TP  +T+N +I+      +++ A ++++K+ + GYH D I  + +I+ L    K+
Sbjct: 75  QLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKV 134

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPK 299
             +L          D +   G  LN+V     I G  K G+   A++ L    G  ++  
Sbjct: 135 HEALHFH-------DHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTN 187

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
              Y+ +I +L       EA  ++ ++    + P    ++AL+ G+  +G  K+A  +  
Sbjct: 188 VVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFH 247

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM  + + PD  T+++L+DA    G  +  + VL  M                   ++  
Sbjct: 248 EMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVM------------------MKEVN 289

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +  +   V   +    V PD H Y ++I    K   +  A++ F+ M  +GI PD +T++
Sbjct: 290 QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYS 349

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LID   K  R   A EL ++M  RG      TY   ++ L +  + +    L+  ++ Q
Sbjct: 350 SLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQ 409

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G+ PN+ TY  L+D   + GRF++A         Q +  F+ +   G K +    N +IN
Sbjct: 410 GIQPNINTYNILIDGLCKEGRFENA---------QVI--FQDLLIKGYKVTVWTYNIMIN 458

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               +    EA  +L+ M++NG  PDVVTY T+++AL + D+ HK
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHK 503



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 190/422 (45%), Gaps = 25/422 (5%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
           +D A++V++ + K    +   +  + LI  L  + K++EA      ++++  RL  ++Y 
Sbjct: 99  MDFAFSVLAKILKMGY-HPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYG 157

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI+   +  +   AL ++ K+     + + + YS +I SL +   +  +   +LY ++ 
Sbjct: 158 ILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEA--YELYSQMI 215

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
             K+  D    + +I GF   G   +A           ++P   T+  ++ AL   G T 
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTK 275

Query: 318 E-----------------AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           E                 A+ VF  + +  + P   +Y  ++K   K+  + +A  + +E
Sbjct: 276 ETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNE 335

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+ PD+ TYS LID    + R   A  +L +M       +   Y+  L       +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             +   ++K++K  G++P+ + YN++ID   K     +A   F  +L +G +    T+N 
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I+     G +D A  L E+M++ G  P   TY  +I  L + +     ++LL  M A+G
Sbjct: 456 MINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515

Query: 541 LL 542
           LL
Sbjct: 516 LL 517



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 151/391 (38%), Gaps = 81/391 (20%)

Query: 297 SPKTATYAAVITAL--SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           SP    +  ++ +L  SN+     A +++  L+ + + P    +N ++  Y  +G +  A
Sbjct: 43  SPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFA 102

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             V++++ + G  PD  T + LI      G+   A      +     + N   Y  ++ G
Sbjct: 103 FSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILING 162

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               GE +   QVL+++    V  +   Y+ +ID+  K   +  A   + +M+ + + PD
Sbjct: 163 LCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPD 222

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T++ LI      G++  A  LF EM                              +L 
Sbjct: 223 VVTFSALIYGFCMVGQFKEAFGLFHEM------------------------------VLT 252

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------------------- 566
           N+      P+V T+  LVD   + G   +                               
Sbjct: 253 NIN-----PDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVT 307

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C   + D+A++ F  MR  G+ P  +  +SLI+   + +R + A+ +
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR---VDK 641
           L  M   G   DV+TYT+ + AL +   VDK
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDK 398



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/286 (19%), Positives = 115/286 (40%), Gaps = 28/286 (9%)

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
           +N   +  A  +   ++++   P+   ++ ++  Y   GE    F VL ++   G  PDT
Sbjct: 59  SNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDT 118

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
                +I        +H A+   D +++ G   + +++  LI+   K G    A ++  +
Sbjct: 119 ITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRK 178

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           +  +        Y+ +I+ L +++   +   L   M  + + P+VVT++ L  IYG    
Sbjct: 179 IDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSAL--IYGF--- 233

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK-- 618
                 C+ G   +A   F  M    + P     N L++A  ++    E   VL  M   
Sbjct: 234 ------CMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKE 287

Query: 619 ---------------ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                          +  + PDV +YT ++K L ++    +  S +
Sbjct: 288 VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLF 333


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 218/486 (44%), Gaps = 21/486 (4%)

Query: 165 LYSILIHALGRSEKLYEAFL-----LSQRQRLTPLT--YNALISACARNDDLEKALNLMS 217
           ++ I + + G+ E LY+  +     +    R+ P T  YN L++     + L+   +  S
Sbjct: 134 IFLIFVESYGKFE-LYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHS 192

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M +     D   ++++I++L + +++  ++L  + +E+    +  D      ++ G+ +
Sbjct: 193 SMVRRRIRHDVSTFNILIKALCKAHQVRPAIL--MMEEMPSYGLSPDETTFTTIMQGYIE 250

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+   A+R        G      T   +I      GR  +A +  +E    G +P    
Sbjct: 251 GGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFT 310

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G  K+G+ K A  VV  M   G+ PD +TY+ LI      G  E A  +L +M 
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN+  Y+ I++            ++ + + S G+ PD   +N +I      +   
Sbjct: 371 SRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHK 430

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AM  F+ M  +G  PD  T+N LID      + + A  L +EM+  G       YN +I
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +   + +R E+ + +   M  QG+  + VTY TL+D   +S R +DA +    L DQ   
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ----LMDQ--- 543

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M  +GL+P     NSL+  F +     +A  ++Q M  +G  PD+VTY TL+  L 
Sbjct: 544 ----MIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 638 RVDKFH 643
           +  +  
Sbjct: 600 KAGRVQ 605



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/502 (24%), Positives = 226/502 (45%), Gaps = 33/502 (6%)

Query: 165 LYSILIHALGRSEKLY-----EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y++L++ L  + KL       + ++ +R R    T+N LI A  +   +  A+ +M +M
Sbjct: 170 FYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEM 229

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
              G   D   ++ ++Q       +D +L +++   E  C   ++    +N +I GF K 
Sbjct: 230 PSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVT---VNVLINGFCKQ 286

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A+ F+  A   G  P   TY  ++  L   G    A  V + +   GL P    Y
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTY 346

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+L+ G  K+G +++A  ++ +M      P+  TY+ +I +     R + A  + + +  
Sbjct: 347 NSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTS 406

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   ++ ++ G       +    + +EMK  G  PD   YN++ID+      L  
Sbjct: 407 KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+     M   G   + + +NTLID   K  R + AEE+F+EM+ +G    + TYN +I+
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN- 577
            L + +R ED  +L+  M  +GL P+  TY +L+  + ++G    A + ++ ++    N 
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586

Query: 578 --------------------AFRVMRTDGLKPSNL---ALNSLINAFGEDQRDAEAFAVL 614
                               A R++R+  +K   L   A N +I A  +  R  EA  + 
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
           + M +    PD +TY  + + L
Sbjct: 647 REMLDKSEPPDAITYKIVYRGL 668



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 167/355 (47%), Gaps = 16/355 (4%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P T  Y  ++  L ++ +    E+    +    ++     +N L+K   K   ++ A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA-G 414
            ++ EM   G+ PDE T++ ++  Y   G  + A + +KE  V +  P + +   +L  G
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGA-LRIKEQMVEYGCPCTDVTVNVLING 282

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  +G   +    ++E  S G  PD   YN +++   K     HAM   D ML  G++PD
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N+LI    K G  + A ++ ++M  R   P   TYN +I+ L ++ R ++   +  
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            + ++G+LP+V T+ +L+              CL      A++ F  M+  G +P     
Sbjct: 403 LLTSKGILPDVCTFNSLIQGL-----------CLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           N LI++    ++  EA  +L+ M+ NG   +VV Y TL+       R+++  ++F
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIF 506



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 25/267 (9%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+S +Y  IL      G ++   +VL+EMK SG E D   + + ++++GK+      +  
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 463 FDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
              M  E  I+PDT  +N L++      +    E     M  R      +T+NI+I  L 
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------- 566
           +  +      ++  M + GL P+  T+TT++  Y + G  D A+                
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 567 ---------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C +G  DQA++  +   ++G +P     N+L+N   +      A  V+  M
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
              GL PD+ TY +L+  L ++ +  +
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEE 361



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 134/299 (44%), Gaps = 9/299 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKH----NLCYSYELLYSILIHALGRSE-KLY 180
           A  +++++ +LC  N  +D A  +   L       ++C    L+  + + +  +S   L+
Sbjct: 378 AVTYNAIISSLCKENR-VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           E  +  +  R    TYN LI +   +  LE+ALNL+ +M  +G   + + Y+ +I    +
Sbjct: 437 EE-MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I+ +  ++++ E+E   +  D    N +I G  K+     A + +      GL P  
Sbjct: 496 NKRIEEA--EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY +++T    +G   +A  + + +  SG  P    Y  L+ G  K G ++ A  ++  
Sbjct: 554 FTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRS 613

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           ++  G++   H Y+ +I A     R   A  + +EM      P++  Y  +  G  + G
Sbjct: 614 IQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 10/223 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++++L+   C  N  I+ A  +   ++   +     + Y+ LI  L +S+++ +A  L  
Sbjct: 485 IYNTLIDGFCK-NKRIEEAEEIFDEMELQGVSRD-SVTYNTLIDGLCKSKRVEDAAQLMD 542

Query: 188 RQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           +      R    TYN+L++   +  D++KA +++  M   G + D + Y+ +I  L +  
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++  +   +L + I+   + L     N VI    K     +AMR           P   T
Sbjct: 603 RVQVA--SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660

Query: 303 YAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKG 344
           Y  V   L N G  I EA     E+ E G  P   ++  L +G
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 15/160 (9%)

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ++  + P ++ Y  ++  LG+   +E ++R+L  M+  G   +   +   V+ YG+   +
Sbjct: 89  KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D+ +  ++ + D+    +R+      KP     N L+N   +  +     +    M    
Sbjct: 149 DEVVGIVKVMEDE----YRI------KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYS 661
           ++ DV T+  L+KAL    K H+V  + L     +M SY 
Sbjct: 199 IRHDVSTFNILIKALC---KAHQVRPAILMME--EMPSYG 233


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 220/501 (43%), Gaps = 72/501 (14%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +L +  +     YNA+IS   + + +E A  ++ +M++ G+  D + ++++I +     K
Sbjct: 35  ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94

Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           ID +L   ++L K+  C                                       P   
Sbjct: 95  IDLALKVFEELLKDNNC--------------------------------------KPTLI 116

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I A    G   EA  + +E+   GL+P T  YN + +G  K G +  A   V  +
Sbjct: 117 TYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL 176

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G  PD  TY++L+ A  N G+W+     + E+     +PN   YS +++     G+ 
Sbjct: 177 NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKI 236

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           + +  ++K MK  G+ PD + Y+ +I  F +   L  A+   D M+ +G  PD + +NT+
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTI 296

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +    K G  D A E+F ++ E G  P  ++YN M++ L           ++  M ++G+
Sbjct: 297 MAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+V+TY +L+              C +G+ D+A+     M +   +P+ ++  +++   
Sbjct: 357 DPDVITYNSLISCL-----------CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---------------------IRVD 640
            +  R  +A  VL  M ENG +P+  TYT L++ +                     I  D
Sbjct: 406 CKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISED 465

Query: 641 KFHKVFSSYLFFNIYKMLSYS 661
            F ++  ++   ++YK   YS
Sbjct: 466 SFKRLNKTFPLLDVYKGFIYS 486



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 198/445 (44%), Gaps = 11/445 (2%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL--CYSYELLYSILIHALGRSEKLYEAFLL 185
           L   L+K   +S + ID A  V+  L+KH     ++Y  + S    A  R E        
Sbjct: 12  LCTKLIKGFFNSRN-IDKATRVMGILEKHGKPDVFAYNAVISGFCKA-NRIESAKTVLDR 69

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD--FINYSLVIQSLTRT 241
            +R+  +P  +T+N +I        ++ AL +  ++ +D  +C    I Y+++I++    
Sbjct: 70  MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDN-NCKPTLITYTILIEAYILE 128

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             ID +L  KL  E+    +E D    N +  G  K G   +A  F+      G  P   
Sbjct: 129 GGIDEAL--KLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++ AL N G+  E E    E+   G +P    Y+ L+    + G ++++  +V  M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  G+ PD + Y  LI A+   G+ + A   L  M      P+   Y+ I+A     G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++  ++   G  P+   YN M+         + A+    +MLS+GI+PD IT+N+L
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I C  + G  D A  L  +M    + P   +Y  ++  L +  R +D   +L  M   G 
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC 426

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE 566
            PN  TYT L++  G SG    A+E
Sbjct: 427 QPNETTYTLLIEGIGFSGSRTQAME 451



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 13/308 (4%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P       L+KG+     +  A  V+  +E+ G  PD   Y+ +I  +  A R ESA+ 
Sbjct: 7   QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKT 65

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTF 450
           VL  M+     P+   ++ ++  +  +G+     +V +E+ K +  +P    Y ++I+ +
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                +  A+   D MLS G+EPDT T+N +     K G+ DRA E    +  RG  P  
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYNI++  L  Q +W++ ++ +  + ++G  PNVVTY+ L+              C +G
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSL-----------CRDG 234

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             +++VN  +VM+  GL P     + LI AF  + +   A   L  M  +G  PD+V Y 
Sbjct: 235 KIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYN 294

Query: 631 TLMKALIR 638
           T+M AL +
Sbjct: 295 TIMAALCK 302



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 19/379 (5%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D  L   +I GF  + +  KA R +G+ +  G  P    Y AVI+    + R   A+ V 
Sbjct: 9   DVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVL 67

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER-SGVLPDEHTYSLLIDAYAN 382
           + +K  G  P    +N ++  +   G +  A  V  E+ + +   P   TY++LI+AY  
Sbjct: 68  DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G  + A  +L EM     +P++F Y+ I  G    G+  R F+ ++ + S G +PD   
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187

Query: 443 YNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           YN+++      GK++     M+    + S G EP+ +T++ LI    + G+ + +  L +
Sbjct: 188 YNILLRALLNQGKWDEGEKWMS---EIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M+E+G  P    Y+ +I     + + +     L  M   G LP++V Y T++       
Sbjct: 245 VMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM------- 297

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
               A  C  G  D AV  F  +   G  P+  + N++++A         A  ++  M  
Sbjct: 298 ----AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 620 NGLKPDVVTYTTLMKALIR 638
            G+ PDV+TY +L+  L R
Sbjct: 354 KGIDPDVITYNSLISCLCR 372



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 179/427 (41%), Gaps = 47/427 (11%)

Query: 100 ASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC 159
           A+ + S+ + L+R++ K        P  + H+++         IDLA  V   L K N C
Sbjct: 57  ANRIESAKTVLDRMKRKGFS-----PDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNC 111

Query: 160 YSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALN 214
               + Y+ILI A      + EA      +LS+       TYN +     +   +++A  
Sbjct: 112 KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE 171

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
            +  +   G   D I Y++++++L    K D    +K   EI                  
Sbjct: 172 FVRTLNSRGCKPDVITYNILLRALLNQGKWDEG--EKWMSEI------------------ 211

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F++                 G  P   TY+ +I++L   G+  E+  + + +KE GL P 
Sbjct: 212 FSR-----------------GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPD 254

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              Y+ L+  + + G L  A   +  M   G LPD   Y+ ++ A    G  + A  +  
Sbjct: 255 AYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFG 314

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +++     PN   Y+ +L+     G+  R   ++ +M S G++PD   YN +I    +  
Sbjct: 315 KLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDG 374

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A+     MLS   +P+ +++ T++    K  R D A E+   M E G  P  TTY 
Sbjct: 375 MVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYT 434

Query: 515 IMINLLG 521
           ++I  +G
Sbjct: 435 LLIEGIG 441



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 13/250 (5%)

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M     +P+  + ++++ G+ +     +  +V+  ++  G +PD   YN +I  F K N 
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYN 514
           +  A    DRM  +G  PD +T N +I      G+ D A ++FEE+ ++    P   TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+I     +   ++  +LL  M ++GL P+  TY  +               C EG  D+
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL-----------CKEGKVDR 168

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A    R + + G KP  +  N L+ A     +  E    +  +   G +P+VVTY+ L+ 
Sbjct: 169 AFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILIS 228

Query: 635 ALIRVDKFHK 644
           +L R  K  +
Sbjct: 229 SLCRDGKIEE 238


>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
          Length = 665

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 232/495 (46%), Gaps = 43/495 (8%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKM 219
           +Y+ LIHA  R+ +   A  + +   R  + P   TYN +I+AC    + +KAL L  KM
Sbjct: 48  IYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKM 107

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            ++G   D + +++V+ +L    +   ++    ++ ++   +  D   LN +I    K G
Sbjct: 108 TENGVGPDLVTHNIVLSALKNGAQYSKAI--SYFEIMKGANVTSDTFTLNIIIHCLVKIG 165

Query: 280 DASKAMRFLG--MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
              +A+        +     P   TY +++ +    G+    +A+F+ +   G+KP   A
Sbjct: 166 QCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVA 225

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN+LL  Y   G  ++A  + + ++++G+ PD  +Y+ L++AY  + + E AR V  +M+
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +  KPN   Y+ ++  Y   G  +    +L EM+  G++PD    + ++   G+   + 
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQIT 345

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                 +   S GI+ +T+ +N+ I  +   G Y++A EL+  M+E    P   TYNI+I
Sbjct: 346 RIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILI 405

Query: 518 ---NLLG--------------------EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
              + LG                    ++ +  + +    +M+  G  P+V+TYTTL+  
Sbjct: 406 SGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQA 465

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y   G +            +A + F+ M  +G+ P  +  +SL+ AF +         ++
Sbjct: 466 YNAGGGW-----------KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLM 514

Query: 615 QYMKENGLKPDVVTY 629
           ++MK+  +  +  +Y
Sbjct: 515 EFMKKKSIPLNQKSY 529



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 171/345 (49%), Gaps = 13/345 (3%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I   +   +  +A  +F E++E   KP    YN+L+  + + G  + A  ++ +M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R+ + P   TY+ +I+A   AG W+ A  + K+M  +   P+   ++ +L+  ++  ++ 
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITWNT 480
           +     + MK + V  DT   N++I    K      A+  F+ M     +  PD +T+ +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++  +   G+ +  + +F+ M   G  P    YN ++     +    +   +   ++  G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L P++V+YT+L++ YG+S + + A E            F  M+ +  KP+ ++ N+LI+A
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKARE-----------VFNKMKKNSCKPNKVSYNALIDA 302

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +G      EA  +L  M+++G++PDVV+ +TL+ A  R  +  ++
Sbjct: 303 YGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRI 347



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 13/304 (4%)

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
           R   Y  +++ Y +   +  A  +  EM+     PD   Y+ LI A++ AG+W  A  ++
Sbjct: 10  RNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIM 69

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           ++M  +   P    Y+ ++      G W++  ++ K+M  +GV PD   +N+++      
Sbjct: 70  EDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNG 129

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER--GYFPCTT 511
                A++ F+ M    +  DT T N +I C  K G+   A ELF  M+ER     P   
Sbjct: 130 AQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY  +++      + E+ K +   M A+G+ PN+V Y +L+  Y              G+
Sbjct: 190 TYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYAS-----------RGM 238

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +A+  F +++ +GL+P  ++  SL+NA+G   +  +A  V   MK+N  KP+ V+Y  
Sbjct: 239 HREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNA 298

Query: 632 LMKA 635
           L+ A
Sbjct: 299 LIDA 302



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/480 (22%), Positives = 209/480 (43%), Gaps = 46/480 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
            T N +I    +     +A+ L + MR+    C  D + Y+ ++ S     ++++   + 
Sbjct: 152 FTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC--KA 209

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           ++  +  + ++ +    N ++  +A  G   +A+    + +  GL P   +Y +++ A  
Sbjct: 210 IFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYG 269

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            S +  +A  VF ++K++  KP   +YNAL+  Y   G LK+A  ++ EME+ G+ PD  
Sbjct: 270 RSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           + S L+ A     +      +L+         N+  Y+  +  Y   G++++  ++   M
Sbjct: 330 SISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM 389

Query: 432 KSSGVEPDTHFYNVMID---TFGKY--------------------NCLHHAMAAFDRMLS 468
           + S V+PD   YN++I      GKY                      L  A + F  M  
Sbjct: 390 RESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKK 449

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP----CTTTYNIMINLLGEQE 524
            G  PD +T+ TLI  +   G + RA +LF+EM+  G  P    C++      N  GE E
Sbjct: 450 SGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLME-AFNKGGEPE 508

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R   V +L+  M+ + +  N  +Y  ++        +  A E +E L D ++++  V   
Sbjct: 509 R---VLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYL-DSSLSSISVG-- 562

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                    LN ++N  G+  +      +   M  +     + TY  +++ L+ V K+ K
Sbjct: 563 --------TLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRK 614



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/452 (20%), Positives = 199/452 (44%), Gaps = 30/452 (6%)

Query: 154 QKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDD 208
           ++   C    + Y+ ++H+    G+ E     F L   + + P  + YN+L+ A A    
Sbjct: 179 ERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGM 238

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
             +AL + + ++++G   D ++Y+ ++ +  R+ + + +  ++++ +++ +  + +    
Sbjct: 239 HREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKA--REVFNKMKKNSCKPNKVSY 296

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  +  AG   +A+  L   +  G+ P   + + ++ A     +    E + E  + 
Sbjct: 297 NALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARS 356

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-E 387
            G+   T AYN+ +K Y+  G  + A  + + M  S V PD  TY++LI   +  G++ E
Sbjct: 357 RGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTE 416

Query: 388 SARIV----------LKEMEVSHAK------------PNSFIYSRILAGYRDRGEWQRTF 425
           S R             KE ++S A+            P+   Y+ ++  Y   G W+R +
Sbjct: 417 SLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAW 476

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            + KEM+ +G+ PD    + +++ F K       +   + M  + I  +  ++  +I   
Sbjct: 477 DLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASC 536

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                +  A E+ E +          T N ++N LG+  + E++ +L   M        +
Sbjct: 537 TMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGL 596

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            TY  ++      G++   IE L+ + D  V+
Sbjct: 597 STYAVVLRNLLVVGKWRKYIEVLQWMEDSGVH 628



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 30/371 (8%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++A GRS   EK  E F   ++    P  ++YNALI A      L++A+ L+ +M 
Sbjct: 261 YTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEME 320

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   D ++ S ++ +  R  +I  + ++ + +      I+L+    N  I  +   GD
Sbjct: 321 KDGIQPDVVSISTLLAACGRCRQI--TRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSN-----------------------SGRTI 317
             KA+      +   + P   TY  +I+  S                         G+  
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLS 438

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EAE+ F  +K+SG  P    Y  L++ Y   G  K A  +  EME +G+ PD    S L+
Sbjct: 439 EAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLM 498

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A+   G  E    +++ M+      N   Y  I+A      +W+   ++++ + SS   
Sbjct: 499 EAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSS 558

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                 N +++  GK     + M  F +M++        T+  ++      G++ +  E+
Sbjct: 559 ISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEV 618

Query: 498 FEEMQERGYFP 508
            + M++ G  P
Sbjct: 619 LQWMEDSGVHP 629



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 55/321 (17%)

Query: 167 SILIHALGRSEKL--YEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S L+ A GR  ++   E  L + R R   L  + YN+ I +     D EKAL L + MR+
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D + Y+++I   ++  K   SL  + +++            + D  V   K G  
Sbjct: 392 SNVKPDAVTYNILISGSSKLGKYTESL--RFFED------------MVDSKVSSTKEGKL 437

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           S+A       +  G  P   TY  +I A +  G    A  +F+E++ +G+ P     ++L
Sbjct: 438 SEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSL 497

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK------- 394
           ++ + K G  +    ++  M++  +  ++ +Y  +I +      W++A  +++       
Sbjct: 498 MEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLS 557

Query: 395 ----------------------------EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
                                       +M  S +      Y+ +L      G+W++  +
Sbjct: 558 SISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIE 617

Query: 427 VLKEMKSSGVEPDTH-FYNVM 446
           VL+ M+ SGV P  + F NV+
Sbjct: 618 VLQWMEDSGVHPTLYMFQNVL 638



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y +MI L     + +  + L   M+     P+   Y +L+  + ++G++  AI  +E + 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
             A+            P+    N++INA G      +A  + + M ENG+ PD+VT+  +
Sbjct: 74  RAAI-----------PPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIV 122

Query: 633 MKALIRVDKFHKVFSSYLFFNIYK 656
           + AL    ++ K  S   +F I K
Sbjct: 123 LSALKNGAQYSKAIS---YFEIMK 143


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 15/409 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-M 290
           S +++ L +   ++ +L   ++ +++  K        N +I+   + G   K       M
Sbjct: 157 SEIVRILGKAKMVNRAL--SVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEM 214

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
              V   P T TY+A+I+A +   R   A  +F+E+KE+GL+P  K Y  L+  Y K+G 
Sbjct: 215 CSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGK 274

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A  +V EM     L    TY+ LI     +GR E A +  K M     KP+  + + 
Sbjct: 275 VEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNN 334

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT-FGKYNCLHHAMAAFDRMLSE 469
           ++         +   ++  EMK     P+   YN +I + F     L  A + F+RM  +
Sbjct: 335 LINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKD 394

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P + T++ LID + K  R ++A  L EEM E+G+ PC   Y  +IN LG  +R++  
Sbjct: 395 GIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVA 454

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             L   ++      +   Y  ++  +G+ GR ++AI           N F  M+  G  P
Sbjct: 455 NELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAI-----------NLFNEMKKLGCTP 503

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              A N+L+      +R  EAF++ + M+ENG  PD+ ++  ++  L R
Sbjct: 504 DVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLAR 552



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 15/385 (3%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL- 326
           L++++    KA   ++A+      +G    P  +TY ++I  L   G   +   ++ E+ 
Sbjct: 156 LSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMC 215

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            E    P T  Y+AL+  + K+     A  +  EM+ +G+ P    Y+ L+  Y   G+ 
Sbjct: 216 SEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKV 275

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           E A  ++KEM         F Y+ ++ G    G  +  +   K M   G +PD    N +
Sbjct: 276 EEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNL 335

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC-GRYDRAEELFEEMQERG 505
           I+  G+ N L  A+  FD M      P+ +T+NT+I   F+       A   FE M++ G
Sbjct: 336 INILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDG 395

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P + TY+I+I+   +  R E    LL  M  +G  P    Y +L++  G + R+D A 
Sbjct: 396 IVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVAN 455

Query: 566 ECLEGLSDQ-AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           E  + L +    ++ RV               +I  FG+  R  EA  +   MK+ G  P
Sbjct: 456 ELFQELKENCGCSSARVYAV------------MIKHFGKCGRLNEAINLFNEMKKLGCTP 503

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           DV  Y  LM  ++R ++  + FS +
Sbjct: 504 DVYAYNALMTGMVRAERMDEAFSLF 528



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 178/384 (46%), Gaps = 5/384 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+ALISA A+ +  + A+ L  +M+++G       Y+ ++    +  K++ +L   L 
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEAL--GLV 282

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSN 312
           KE+   +  L      ++I G  K+G    A M +  M +  G  P       +I  L  
Sbjct: 283 KEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLINILGR 341

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKG-YVKMGYLKDAEFVVSEMERSGVLPDEH 371
           S    +A  +F+E+K     P    YN ++K  +     L +A      M++ G++P   
Sbjct: 342 SNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSF 401

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TYS+LID Y    R E A ++L+EM+     P    Y  ++        +    ++ +E+
Sbjct: 402 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQEL 461

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K +        Y VMI  FGK   L+ A+  F+ M   G  PD   +N L+    +  R 
Sbjct: 462 KENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERM 521

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A  LF  M+E G  P   ++NI++N L      +    +   M+   + P+VV++ T+
Sbjct: 522 DEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTI 581

Query: 552 VDIYGQSGRFDDAIECLEGLSDQA 575
           +    ++G F++A + ++ +S + 
Sbjct: 582 LGCLSRAGLFEEAAKLMQEMSSKG 605



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/482 (22%), Positives = 215/482 (44%), Gaps = 22/482 (4%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S ++  LG+++ +  A      +  ++ R T  TYN++I    +    EK   L ++M  
Sbjct: 157 SEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCS 216

Query: 222 DGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +  HC  D + YS +I +  + N+ DS++  +L+ E++ + ++   ++   ++  + K G
Sbjct: 217 E-VHCFPDTVTYSALISAFAKLNRDDSAI--RLFDEMKENGLQPTAKIYTTLMGIYFKVG 273

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+  +   +         TY  +I  L  SGR  +A   ++ + + G KP     N
Sbjct: 274 KVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMN 333

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA-GRWESARIVLKEMEV 398
            L+    +  +L+DA  +  EM+     P+  TY+ +I +   A      A    + M+ 
Sbjct: 334 NLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKK 393

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+SF YS ++ GY      ++   +L+EM   G  P    Y  +I+T G       
Sbjct: 394 DGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDV 453

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  +           +  +I    KCGR + A  LF EM++ G  P    YN ++ 
Sbjct: 454 ANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMT 513

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            +   ER ++   L   M   G  P++ ++  +++   ++G    A+E            
Sbjct: 514 GMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALE-----------M 562

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M+   +KP  ++ N+++          EA  ++Q M   G + D++TY+++++A+ +
Sbjct: 563 FTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGK 622

Query: 639 VD 640
           VD
Sbjct: 623 VD 624



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 188/405 (46%), Gaps = 8/405 (1%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A   L R +     F   +   L P    Y  L+    +   +E+AL
Sbjct: 220 CFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEAL 279

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+ +MR          Y+ +I+ L ++ +++ + +   YK +  D  + D  L+N++I 
Sbjct: 280 GLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMT--YKNMLKDGCKPDVVLMNNLIN 337

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI-EAEAVFEELKESGLK 332
              ++     A++     + +  +P   TY  +I +L  +   + EA + FE +K+ G+ 
Sbjct: 338 ILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIV 397

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P +  Y+ L+ GY K   ++ A  ++ EM+  G  P    Y  LI+    A R++ A  +
Sbjct: 398 PSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANEL 457

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +E++ +    ++ +Y+ ++  +   G       +  EMK  G  PD + YN ++    +
Sbjct: 458 FQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVR 517

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A + F  M   G  PD  + N +++   + G    A E+F +M+     P   +
Sbjct: 518 AERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVS 577

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +N ++  L     +E+  +L+  M ++G   +++TY+++++  G+
Sbjct: 578 FNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGK 622



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 10/170 (5%)

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           E D+ T+  LI C  +   +    +  ++M +          + ++ +LG+ +       
Sbjct: 115 EHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALS 174

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           +   ++ +   P   TY +++ +  Q G  +   E    +  + V+ F         P  
Sbjct: 175 VFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSE-VHCF---------PDT 224

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +  ++LI+AF +  RD  A  +   MKENGL+P    YTTLM    +V K
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGK 274


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 23/503 (4%)

Query: 144 DLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           DL  A+V  L K+ L    +SY L+Y  +    G  +K +  FL    Q + P  L  N+
Sbjct: 117 DLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD--GEVDKAHCLFLEMMEQGVLPKILICNS 174

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +  +++KA +++ KM   G   D   YSL+I  L ++  +D +  +++ +++  
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA--ERVLEQMVE 232

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G++ +G  ++++R        G+ P      + I AL   GRT E
Sbjct: 233 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 292

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKM--GYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           A+ +F+ +   G KP   +Y+ +L GY       L D   + + M   G+ P++H +++L
Sbjct: 293 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 352

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+AYA  G  + A ++ ++M+     P++  ++ +++     G           M   GV
Sbjct: 353 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 412

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDRAE 495
            P    Y  +I     +  L  A      M+++ I P  + + +++I+   K GR    +
Sbjct: 413 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 472

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++ + M + G  P   T+N ++         E+   LL  M + G+ PN   Y TLVD Y
Sbjct: 473 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 532

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++GR DDA+             FR M   G+KP+++  + +++   + +R   A  +  
Sbjct: 533 CKNGRIDDAL-----------TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 581

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M E+G    + TY  ++  L R
Sbjct: 582 EMIESGTTVSIHTYGVVLGGLCR 604



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 217/506 (42%), Gaps = 59/506 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R    +  L ++ ++ ++G   D  +YSL I    +  ++D +    L+ 
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKA--HCLFL 158

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +     + N +I    K  +  KA   +      G++P   TY+ +I  L  S 
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +AE V E++ E+G +P +  YN+L+ GY   G   ++  V  +M   GV+P     +
Sbjct: 219 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 278

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE--WQRTFQVLKEMK 432
             I A    GR   A+ +   M +   KP+   YS +L GY    +        +   M 
Sbjct: 279 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ P+ H +N++I+ + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR D
Sbjct: 339 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398

Query: 493 RAEELFEEMQERGYFPCTTTYNIM------------------------------------ 516
            A   F  M + G  P    Y  +                                    
Sbjct: 399 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 458

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN L ++ R  + K ++  M   G  PNVVT+ +L++ Y           CL G  ++A 
Sbjct: 459 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY-----------CLVGNMEEAF 507

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M + G++P+     +L++ + ++ R  +A  V + M   G+KP  V Y+ ++  L
Sbjct: 508 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 567

Query: 637 IRVDK-------FHKVFSSYLFFNIY 655
            +  +       FH++  S    +I+
Sbjct: 568 FQARRTTAAKKMFHEMIESGTTVSIH 593



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 166/347 (47%), Gaps = 3/347 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +N LI+A AR   ++KA+ +   M+  G   D + ++ VI SL R  ++D +L  K   
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL-HKFNH 406

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY-AAVITALSNS 313
            ++   +     +   +I G    G+  KA   +       + P    Y +++I  L   
Sbjct: 407 MVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKE 465

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  E + + + + ++G +P    +N+L++GY  +G +++A  ++  M   G+ P+ + Y
Sbjct: 466 GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 525

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             L+D Y   GR + A  V ++M     KP S +YS IL G           ++  EM  
Sbjct: 526 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIE 585

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG     H Y V++    + NC   A    +++ +  ++ D IT+N +I   FK GR   
Sbjct: 586 SGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQE 645

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           A+ELF+ +   G  P   TY++MI  L ++E +E+   L  ++   G
Sbjct: 646 AKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 5/379 (1%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYK 254
           N+ I A  ++    +A  +   M   G   D I+YS ++         DS L  +  ++ 
Sbjct: 278 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT--DSCLADVHNIFN 335

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    I  +  + N +I  +A+ G   KAM      Q  G+ P T T+A VI++L   G
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY- 373
           R  +A   F  + + G+ P    Y  L++G    G L  A+ ++SEM    + P    Y 
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 455

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+     GR    + ++  M  +  +PN   ++ ++ GY   G  +  F +L  M S
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+EP+ + Y  ++D + K   +  A+  F  ML +G++P ++ ++ ++   F+  R   
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 575

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++F EM E G      TY +++  L      ++   LL  + A  +  +++T+  ++ 
Sbjct: 576 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635

Query: 554 IYGQSGRFDDAIECLEGLS 572
              + GR  +A E  + +S
Sbjct: 636 AMFKVGRRQEAKELFDAIS 654



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  HTY++LID Y    R +    ++  +  +   P+ F YS ++ G+   GE  +   +
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM   GV P     N +I    K   +  A +   +M+  GI PD  T++ +ID   K
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               D+AE + E+M E G  P + TYN +I+       W +  R+   M + G++P V  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 548 YTTLVDIYGQSGRFDDAIEC------LEGLSDQAV---------------------NAFR 580
             + +    + GR ++A +C      L+G     +                     N F 
Sbjct: 277 CNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV- 639
           +M T G+ P+    N LINA+       +A  + + M+  G+ PD VT+ T++ +L R+ 
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 640 ---DKFHK 644
              D  HK
Sbjct: 396 RLDDALHK 403


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 230/493 (46%), Gaps = 28/493 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           ++ L+  L + +   + F L  + RL+ +     T N L++     + + + L +M+ + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID-SSLLQKLYKEIECDKIELD-GQLLNDVIVGFAKA 278
           + GY  D + Y+ +I+ L   ++I  ++LL    +++ C    +  G L+     G  + 
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK----GLCRT 214

Query: 279 GDASKAMRFL------GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           G+ S A++            G+   P   +Y+ +I AL    R  EA  +FEE+K  G+ 
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   +Y +L+ G+   G  ++A+ + +EM   GV P+  T+++LID     G+   A+ +
Sbjct: 275 PTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 334

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L+ M      PN   Y+ ++ G+   G+     ++   M S G EPD   Y V+I+ + K
Sbjct: 335 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 394

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            + +  AM  ++ ML  G  PD  T+  L+   F+ G+   A++LF  M+  G       
Sbjct: 395 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 454

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y I +N L +     +   L   +++  +  ++  +  L+D   ++G+ + A E  E L 
Sbjct: 455 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 514

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +            L+P  +  N +I+ F    +  +A  + Q M++NG  PD +TY TL
Sbjct: 515 QEE-----------LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 563

Query: 633 MKALIRVDKFHKV 645
           ++      K  KV
Sbjct: 564 IRGFFESKKLEKV 576



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 213/458 (46%), Gaps = 17/458 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-Q 189
           LL  LC+ N  +    AV++ + +    Y  +++ Y+ LI  L    ++ +A LL  R Q
Sbjct: 137 LLNCLCNVNR-VGEGLAVMAGILRRG--YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 190 RL--TP--LTYNALISACARNDDLEKALNLMSKMRQDG--YHCDF----INYSLVIQSLT 239
           +L  TP  +TY  L+    R  ++  AL L  +M  D   Y  +F    I+YS++I +L 
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  + D +  + L++E++   +         +I GF   G   +A R        G+ P 
Sbjct: 254 KDRREDEA--RDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  +I  L   G+ IEA+ + E + + G+ P    YN+L++G+  +G L  A  +  
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  PD   Y++LI+ Y    + E A  +   M     +P+   Y  +L G    G
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     ++   MK  G+  D + Y + ++   K  CL  AM  F+++ S  I+ D   +N
Sbjct: 432 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFN 491

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID   K G+ + A ELFE++ +    P   TYNIMI+      +      L   M   
Sbjct: 492 CLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKN 551

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           G  P+ +TY TL+  + +S + +  +E L  +  + V+
Sbjct: 552 GCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 183/396 (46%), Gaps = 22/396 (5%)

Query: 276 AKAGD--ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            K G+  A++A +F  +      +P  +++  +++ L+      +   ++ +++ SG+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
                N LL     +  + +   V++ + R G +PD  TY+ LI       R   A ++ 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS----GV--EPDTHFYNVMI 447
             M+     PN+  Y  ++ G    G      ++ +EM +     G+  +P    Y+++I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K      A   F+ M  +G+ P  I++ +LI      G+++ A+ LF EM  +G  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   T+N++I++L ++ +  + K LL  M  +G++PN++TY +L++ +           C
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF-----------C 358

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L G  + A   F  M + G +P  +    LIN + +  +  EA  +   M + G +PDV 
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418

Query: 628 TYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGE 663
           TY  L+  L +     KV  +   F + K+    G+
Sbjct: 419 TYGALLTGLFQGG---KVGDAKKLFGVMKVYGIPGD 451



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 7/282 (2%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +++LI  L +  K+ EA   L    QR + P  LTYN+LI       DL  A  L   M 
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+++I    +T+K++ ++  KLY  +       D +    ++ G  + G 
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAM--KLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A +  G+ +  G+      Y   +  L  +G   EA  +F +LK   +K   + +N 
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G L+ A  +  ++ +  + PD  TY+++I  +   G+   A I+ ++ME + 
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             P+   Y+ ++ G+ +  + ++  ++L  M    V  D + 
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNI 594


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 23/503 (4%)

Query: 144 DLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           DL  A+V  L K+ L    +SY L+Y  +    G  +K +  FL    Q + P  L  N+
Sbjct: 193 DLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD--GEVDKAHCLFLEMMEQGVLPKILICNS 250

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +  +++KA +++ KM   G   D   YSL+I  L ++  +D +  +++ +++  
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA--ERVLEQMVE 308

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G++ +G  ++++R        G+ P      + I AL   GRT E
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKM--GYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           A+ +F+ +   G KP   +Y+ +L GY       L D   + + M   G+ P++H +++L
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 428

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+AYA  G  + A ++ ++M+     P++  ++ +++     G           M   GV
Sbjct: 429 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 488

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDRAE 495
            P    Y  +I     +  L  A      M+++ I P  + + +++I+   K GR    +
Sbjct: 489 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 548

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++ + M + G  P   T+N ++         E+   LL  M + G+ PN   Y TLVD Y
Sbjct: 549 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 608

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++GR DDA+             FR M   G+KP+++  + +++   + +R   A  +  
Sbjct: 609 CKNGRIDDAL-----------TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 657

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M E+G    + TY  ++  L R
Sbjct: 658 EMIESGTTVSIHTYGVVLGGLCR 680



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 217/506 (42%), Gaps = 59/506 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R    +  L ++ ++ ++G   D  +YSL I    +  ++D +    L+ 
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKA--HCLFL 234

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +     + N +I    K  +  KA   +      G++P   TY+ +I  L  S 
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +AE V E++ E+G +P +  YN+L+ GY   G   ++  V  +M   GV+P     +
Sbjct: 295 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE--WQRTFQVLKEMK 432
             I A    GR   A+ +   M +   KP+   YS +L GY    +        +   M 
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 414

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ P+ H +N++I+ + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR D
Sbjct: 415 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 474

Query: 493 RAEELFEEMQERGYFPCTTTYNIM------------------------------------ 516
            A   F  M + G  P    Y  +                                    
Sbjct: 475 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 534

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN L ++ R  + K ++  M   G  PNVVT+ +L++ Y           CL G  ++A 
Sbjct: 535 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY-----------CLVGNMEEAF 583

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M + G++P+     +L++ + ++ R  +A  V + M   G+KP  V Y+ ++  L
Sbjct: 584 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 643

Query: 637 IRVDK-------FHKVFSSYLFFNIY 655
            +  +       FH++  S    +I+
Sbjct: 644 FQARRTTAAKKMFHEMIESGTTVSIH 669



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 10/383 (2%)

Query: 166 YSILIHALGRS-----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           YS ++H    +       ++  F L   + + P    +N LI+A AR   ++KA+ +   
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   D + ++ VI SL R  ++D +L  K    ++   +     +   +I G    
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDAL-HKFNHMVDIG-VPPSEAVYGCLIQGCCNH 505

Query: 279 GDASKAMRFLGMAQGVGLSPKTATY-AAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           G+  KA   +       + P    Y +++I  L   GR  E + + + + ++G +P    
Sbjct: 506 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 565

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N+L++GY  +G +++A  ++  M   G+ P+ + Y  L+D Y   GR + A  V ++M 
Sbjct: 566 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 625

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP S +YS IL G           ++  EM  SG     H Y V++    + NC  
Sbjct: 626 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 685

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    +++ +  ++ D IT+N +I   FK GR   A+ELF+ +   G  P   TY++MI
Sbjct: 686 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 745

Query: 518 NLLGEQERWEDVKRLLGNMRAQG 540
             L ++E +E+   L  ++   G
Sbjct: 746 TNLIKEESYEEADNLFISVEKSG 768



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 208/487 (42%), Gaps = 33/487 (6%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYK 254
           N+ I A  ++    +A  +   M   G   D I+YS ++         DS L  +  ++ 
Sbjct: 354 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT--DSCLADVHNIFN 411

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    I  +  + N +I  +A+ G   KAM      Q  G+ P T T+A VI++L   G
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY- 373
           R  +A   F  + + G+ P    Y  L++G    G L  A+ ++SEM    + P    Y 
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 531

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+     GR    + ++  M  +  +PN   ++ ++ GY   G  +  F +L  M S
Sbjct: 532 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 591

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+EP+ + Y  ++D + K   +  A+  F  ML +G++P ++ ++ ++   F+  R   
Sbjct: 592 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 651

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++F EM E G      TY +++  L      ++   LL  + A  +  +++T+  ++ 
Sbjct: 652 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 711

Query: 554 IYGQSGRFDDAIECLEGLS------------------------DQAVNAFRVMRTDGLKP 589
              + GR  +A E  + +S                        ++A N F  +   G   
Sbjct: 712 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 771

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK----V 645
            +  LN ++         A+A   L  + EN L  +  T + L     R  K+ +    +
Sbjct: 772 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831

Query: 646 FSSYLFF 652
            + Y FF
Sbjct: 832 PAKYQFF 838



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  HTY++LID Y    R +    ++  +  +   P+ F YS ++ G+   GE  +   +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM   GV P     N +I    K   +  A +   +M+  GI PD  T++ +ID   K
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               D+AE + E+M E G  P + TYN +I+       W +  R+   M + G++P V  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 548 YTTLVDIYGQSGRFDDAIEC------LEGLSDQAV---------------------NAFR 580
             + +    + GR ++A +C      L+G     +                     N F 
Sbjct: 353 CNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 411

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV- 639
           +M T G+ P+    N LINA+       +A  + + M+  G+ PD VT+ T++ +L R+ 
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471

Query: 640 ---DKFHK 644
              D  HK
Sbjct: 472 RLDDALHK 479


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 13/446 (2%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N ++    +   + +A NL+ +M   G   D ++Y +V+    R  ++D  L  KL  E+
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVL--KLVDEL 303

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   ++ D  + N++I+   K G+  +A + L   +  G+ P    Y  VI+     G  
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A  +F+E++   + P    Y +++ G  K G + +A  + +EM   G+ PDE TY+ L
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ID Y  AG  + A  V  +M      PN   Y+ +  G    GE     ++L EM   G+
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+ + YN +++   K   +   +   + M   G  PDTIT+ TL+D + K G   +A E
Sbjct: 484 QPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L   M  +   P   T+N+++N        ED +RL+  M  +G++PN  T+ +L+  Y 
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY- 602

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C++         ++ M   G+ P +   N LI    + +   EA+ + + 
Sbjct: 603 ----------CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 652

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M E G      TY  L++   +  KF
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKF 678



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 201/425 (47%), Gaps = 8/425 (1%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMS 217
           E +Y+ +I  L ++ ++ EA  L +  R   + P  + Y  +IS   +  ++  A  L  
Sbjct: 312 EYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFD 371

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +MR+     D + Y+ VI  + ++ K+  +  ++++ E+    +E D      +I G+ K
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEA--REMFNEMLVKGLEPDEVTYTALIDGYCK 429

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG+  +A          GL+P   TY A+   L  +G    A  +  E+   GL+P    
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  K+G ++    ++ EM+ +G  PD  TY+ L+DAY   G    A  +L+ M 
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P    ++ ++ G+   G  +   ++++ M   G+ P+   +N ++  +   N + 
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                +  M   G+ PD+ T+N LI  H K      A  L +EM E+GY     TY+ +I
Sbjct: 610 ATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALI 669

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-CLEGLSDQAV 576
               +++++ + ++L   MR  GL+     Y   VD+  + G ++  +E C E +++ + 
Sbjct: 670 RGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSG 729

Query: 577 NAFRV 581
             F V
Sbjct: 730 TIFVV 734



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 156/326 (47%), Gaps = 11/326 (3%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VFEE  E G+   T + N +L    ++G +++A  ++ +M   G  PD  +Y +++ 
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            Y   G  +    ++ E++    KP+ +IY+ I+      GE     Q+L+ M+  GV P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   Y  +I  F K   +  A   FD M  + I PD +T+ ++I    K G+   A E+F
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM  +G  P   TY  +I+   +    ++   +   M  +GL PNVVTYT L D   ++
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G  D A E L  +S +           GL+P+    N+++N   +     +   +++ M 
Sbjct: 466 GEIDVANELLHEMSRK-----------GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHK 644
             G  PD +TYTTLM A  ++ +  K
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAK 540



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 164/365 (44%), Gaps = 24/365 (6%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +G+   T +   V+  L   G+  EA  +  ++ + G  P   +Y  ++ GY ++G L  
Sbjct: 236 LGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDK 295

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              +V E++  G+ PDE+ Y+ +I      G    A  +L+ M      P++ +Y+ +++
Sbjct: 296 VLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVIS 355

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+   G      ++  EM+   + PD   Y  +I    K   +  A   F+ ML +G+EP
Sbjct: 356 GFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEP 415

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+  LID + K G    A  +  +M ++G  P   TY  + + L +    +    LL
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------ 569
             M  +GL PNV TY T+V+   + G  +  ++ +E                        
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKM 535

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G   +A    R+M    L+P+ +  N L+N F       +   ++++M E G+ P+  T+
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF 595

Query: 630 TTLMK 634
            +LMK
Sbjct: 596 NSLMK 600



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 11/224 (4%)

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           +V +E    GV  +T   N+++    +   +  A     +M   G  PD +++  ++  +
Sbjct: 228 KVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGY 287

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G  D+  +L +E++ +G  P    YN +I LL +     + ++LL  MR  G+ P+ 
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           V YTT++  +           C  G    A   F  MR   + P  +   S+I+   +  
Sbjct: 348 VVYTTVISGF-----------CKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSG 396

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  EA  +   M   GL+PD VTYT L+    +  +  + FS +
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVH 440


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 220/469 (46%), Gaps = 34/469 (7%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +IL++ L    +L E F     +L +      +TYN LI        + +A  L  +M++
Sbjct: 108 NILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK 167

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD--KIELDGQ----LLNDVIVGF 275
            G   D + Y  +I+ L  T  I+ +L  KL++E+  D  + E++ +      N ++ G 
Sbjct: 168 LGCTPDVVTYGTLIKGLCGTGNINIAL--KLHQEMLNDISRYEINCKPNVITYNIIVDGL 225

Query: 276 AKAGDASKA------MRFLGMAQG----VGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
            K G   +A      M+  GM        GL P   T+  +I  L   G+ IEA+ +   
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 285

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + ESG+ P    YN+L++G+  +G L  A  +   M   G  PD  +Y++LI+ Y+   +
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A  +  EM +   +PN   Y  +L G    G+     ++   MK+ G+  +++ Y +
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
            +D   K +CL  AM  F  + S   + +    N LID   K G+ + A ELFE++   G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TY IMI+    + + +    L+  M A G  P+++TY TL+  + +S + ++ +
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + L  ++ + V+           P  +  + +++   +D++  E   +L
Sbjct: 526 QLLHRMAQKDVS-----------PDAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 221/487 (45%), Gaps = 43/487 (8%)

Query: 183 FLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F L  R   TP   ++N L+S  A+     +  +L ++MR  G   D    ++++  L  
Sbjct: 57  FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCN 116

Query: 241 TNKID------SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
            N++       + +L++ Y          +    N +I G       S+A R     Q +
Sbjct: 117 VNRLREGFAAFAGILRRGYSP--------NIVTYNTLIKGLCMEHRISEATRLFLRMQKL 168

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEEL------KESGLKPRTKAYNALLKGYVKM 348
           G +P   TY  +I  L  +G    A  + +E+       E   KP    YN ++ G  K+
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKV 228

Query: 349 GYLKDAEFVVSEMERSGVLPDEH----------TYSLLIDAYANAGRWESARIVLKEMEV 398
           G   +A+ +  EM+  G++P+E           T+++LID     G+   A+ +L  M  
Sbjct: 229 GREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 288

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+   Y+ ++ G+   G+     ++   M S G EPD   YNV+I+ + K   +  
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 348

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  ++ ML  G  P+ IT+++L+   F  G+ D A++LF  M+  G    + TY I ++
Sbjct: 349 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 408

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L + +   +  +L   +++      +     L+D   ++G+ + A E  E LS++    
Sbjct: 409 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNE---- 464

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  G +P+ +    +I+ F  + +  +A  ++Q M+ NG  PD++TY TLM+    
Sbjct: 465 -------GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYE 517

Query: 639 VDKFHKV 645
            +K  +V
Sbjct: 518 SNKLEEV 524



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 106/229 (46%), Gaps = 7/229 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI+   ++ K+ EA      +L   +R   +TY++L+        ++ A  L S M+
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y + +  L + + +  ++  KL+ E++    +L+ + LN +I G  KAG 
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAM--KLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          G  P   TY  +I      G+  +A  + ++++ +G  P    YN 
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           L++G+ +   L++   ++  M +  V PD  T S+++D  +   +++  
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQEC 559



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 17/190 (8%)

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           HA+  F  M+     P   ++N L+    K   Y +   L+ +M+  G      T NI++
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L    R  +       +  +G  PN+VTY TL+              C+E    +A  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL-----------CMEHRISEATR 160

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM------KENGLKPDVVTYTT 631
            F  M+  G  P  +   +LI           A  + Q M       E   KP+V+TY  
Sbjct: 161 LFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNI 220

Query: 632 LMKALIRVDK 641
           ++  L +V +
Sbjct: 221 IVDGLCKVGR 230


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 206/479 (43%), Gaps = 50/479 (10%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N LI    +    +  +++ SKM        F + S +I+S   T K   S    +   I
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQK--PSFAFGVLGLI 120

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                 L+    N ++ GF ++GD+ KAM    M +   L P   +Y  VI  L    R 
Sbjct: 121 MKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRL 180

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +EA+ +F+E+K    KP +  ++AL+ G+ K G +++   ++ EME+ G+  D   YS L
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  + + G  E  + +  EM   +  PN   YS ++     + +W+   Q+L  M    V
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y V+ D   K      A+   D M+  G EP+ +T+N +I+   K GR D A  
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALG 360

Query: 497 LFEEMQERGYFPCTTTY-------------------------------------NIMINL 519
           + E M ++G  P   TY                                     N++I  
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQE 420

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +Q R    KR+   M  +G   N+VTY  L+D Y  +G+   A+E    L   AV++ 
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALE----LWKDAVDS- 475

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                 G+ P+      LIN   + Q  + A  +    + +G +P V  Y TLM +L R
Sbjct: 476 ------GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 223/512 (43%), Gaps = 21/512 (4%)

Query: 145 LAYAVVSWLQK---HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNAL 199
            A+ V+  + K   H   Y++ LL      + G S K  + F + +R  L P  ++YN +
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQS-GDSHKAMDLFCMMKRNCLIPDCVSYNTV 170

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I+   +   L +A  L  +M+      + + +S +I    +   ++      L +E+E  
Sbjct: 171 INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF--GLLEEMEKM 228

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +E D  + + +I GF   GD  +            ++P   TY+ ++ AL    +  EA
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             + + +    ++P   AY  L  G  K G   DA  V+  M + G  P+  TY+ +I+ 
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIING 348

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS--GVE 437
               GR + A  +L+ M     KP+   YS ++ G    G+      +L  + S    ++
Sbjct: 349 LCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIK 408

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   +N++I    K   L HA   +  M+  G   + +T+N LID +   G+  +A EL
Sbjct: 409 PDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +++  + G  P   TY ++IN L + +     K L    RA G  P V  Y TL+     
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM----- 523

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                 A  C E   +QA N F+ MR     P  ++ N +I+   +      A  +L  M
Sbjct: 524 ------ASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEM 577

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
               L PD +T++ L+   +++ +  +  S Y
Sbjct: 578 LNMNLVPDNITFSILINRFLKLGQLDEAASLY 609



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 160/349 (45%), Gaps = 46/349 (13%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           V + P   + +A+I +  N+ +   A  V   + + G       +N LLKG+ + G    
Sbjct: 88  VSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHK 147

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +   M+R+ ++PD  +Y+ +I+      R   A+                       
Sbjct: 148 AMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAK----------------------- 184

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                       ++ KEMK    +P++  ++ +ID F K   +       + M   G+E 
Sbjct: 185 ------------ELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D   ++ LI      G  +R +ELF EM  +   P   TY+ ++N L ++++W++  ++L
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M    + P+VV YT L D   ++GR  DAI+ L+           +M   G +P+N+ 
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD-----------LMVKRGEEPNNVT 341

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            N++IN   ++ R  +A  +L+ M + G KPDVVTY+TL+K L  V K 
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 220/529 (41%), Gaps = 89/529 (16%)

Query: 129 WHSLLKNLCSSNSS---IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++ LLK  C S  S   +DL       + K N      + Y+ +I+ L + ++L EA  L
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLF-----CMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKEL 186

Query: 186 SQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
            +  +     P  +T++ALI    +N D+E+   L+ +M + G   D   YS +I     
Sbjct: 187 FKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCS 246

Query: 241 TNKID---------------------SSLLQKLYKEIECDKIELDGQLLN---------D 270
              I+                     S L+  L K+    K +   Q+L+         D
Sbjct: 247 KGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKK---QKWKEAAQMLDTMTGCKVRPD 303

Query: 271 VIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           V+       G +K G AS A++ L +    G  P   TY A+I  L   GR  +A  + E
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDA----------EF-----------VVSE--- 360
            + + G KP    Y+ L+KG   +G + +A          EF           V+ E   
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCK 423

Query: 361 -------------MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
                        M   G   +  TY++LID Y +AG+   A  + K+   S   PN+  
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G            +  + ++SG  P    YN ++ +  + + +  A   F  M 
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR 543

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           +   +PD +++N +ID   K G  + A+EL  EM      P   T++I+IN   +  + +
Sbjct: 544 NANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLD 603

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +   L   M + G +P+ V + +L+  Y   G+ +  +  L+ ++D+ V
Sbjct: 604 EAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 175/376 (46%), Gaps = 11/376 (2%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++L   L ++ +  +A      ++ + +    +TYNA+I+   +   ++ AL ++  M 
Sbjct: 307 YTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMA 366

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLY-KEIECDKIELDGQLLNDVIVGFAK 277
           + G   D + YS +++ L    KID +  LL  L  KE     I+ D    N VI    K
Sbjct: 367 KKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH---IKPDVFAFNLVIQELCK 423

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                 A R        G      TY  +I    ++G+  +A  ++++  +SG+ P    
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  L+ G  KM  L  A+ + ++   SG  P    Y+ L+ +       E AR + +EM 
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR 543

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            ++  P+   ++ I+ G    G+ +   ++L EM +  + PD   ++++I+ F K   L 
Sbjct: 544 NANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLD 603

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A + ++RM+S G  PD + +++L+  +   G+ ++   + ++M ++     +   + ++
Sbjct: 604 EAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663

Query: 518 NLLGEQERWEDVKRLL 533
             L    +  D++++L
Sbjct: 664 ACLCNMSKDVDIEKIL 679


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 241/513 (46%), Gaps = 60/513 (11%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           ++S++  LC + + +D A  V+  +  +++    E+ Y+ +IH    LGR ++  + F  
Sbjct: 310 YNSIVHALCKARA-MDKAELVLRQMFDNSI-QPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R+ L P  +T+N+L+ +  ++   ++A  +   +   G+  D I+YS+++       +
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427

Query: 244 -IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D   +  L+  +  + I  D    N +I   AK G   +A+      +G G+SP   T
Sbjct: 428 FVD---MNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           YA VI AL   GR  +A     ++   GLKP T  Y++L++G+   G L  A+ +VSEM 
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544

Query: 363 RSGV-LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             G+  P+   +S +I +  N GR  +A+ V   +     +P+ F ++ ++ GY   G+ 
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            + F VL  M S+G EPD   Y+ +I+ + K   +   +  F  ML + ++P T+T++ +
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLV 664

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTY---------------------------- 513
           +D  F+ GR   A+++F EM E G     +TY                            
Sbjct: 665 LDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNL 724

Query: 514 -------NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                  N MI+ L + +R E+   L  ++ A GL+PN  TY  ++            I 
Sbjct: 725 KFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI------------IN 772

Query: 567 CL-EGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            L EG  ++A   F  M   G  PS+  LN +I
Sbjct: 773 LLKEGSVEEADIMFSSMEKTGCAPSSRLLNDII 805



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 204/477 (42%), Gaps = 34/477 (7%)

Query: 190 RLTPLT---YNALISAC--ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           R+ PLT   Y  L+  C  AR  DL  A    +++ + G   D I  +  ++ L    + 
Sbjct: 159 RVVPLTVHTYGILMDCCCRARRPDLGPA--FFARLLRAGLRTDGIVTNTFLKCLCYAKRT 216

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATY 303
           D +L   L++  E   +  D    N VI        + +A+   L M +G G SP   +Y
Sbjct: 217 DEALSMLLHRMSELGCVP-DAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L   G   +A  +F E+ + G+ P    YN+++    K   +  AE V+ +M  
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFD 335

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           + + PDE TY+ +I  Y+  GRW+ A  + KEM      P+   ++ ++         + 
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++   + + G +PD   Y++++  +            F  M   GI  D+  +N LI+
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            H K G  D A  +F EM+ +G  P   TY  +I  L    R  D    L  M + GL P
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----------------NAFRVMRTD-- 585
           N V Y +L+  +   G    A E +  + DQ +                N  RVM     
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 586 -------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                  G +P     NSLI+ +    +  +AF VL  M   G +PDVVTY+TL+  
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 253/543 (46%), Gaps = 36/543 (6%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFL-L 185
           ++ LK LC +  + D A +++        C      Y+ +I +L    RS++  +  L +
Sbjct: 204 NTFLKCLCYAKRT-DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRM 262

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++    +P  ++Y  +I       ++ KA NL ++M Q G   + + Y+ ++ +L +   
Sbjct: 263 TKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARA 322

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D + L  + +++  + I+ D      +I G++  G   +A +        GL P   T+
Sbjct: 323 MDKAEL--VLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTF 380

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++ +L    R+ EA  +F  +   G KP   +Y+ LL GY   G   D   +   M  
Sbjct: 381 NSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +G++ D H +++LI+A+A  G  + A ++  EM      PN   Y+ ++A     G    
Sbjct: 441 NGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD 500

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             + L +M S G++P+T  Y+ +I  F  +  L  A      M+ +GI    IT+ + I 
Sbjct: 501 AMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSI- 559

Query: 484 CHFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRA 538
            H  C  GR   A+++F  +   G  P   T+N +I+   L+G+ ++   V   L  M +
Sbjct: 560 IHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGV---LDAMVS 616

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G  P+VVTY+TL++ Y +SGR DD +             FR M    +KP+ +  + ++
Sbjct: 617 AGTEPDVVTYSTLINGYFKSGRIDDGLI-----------LFREMLCKRVKPTTVTYSLVL 665

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-------VDKFHKVFSSYLF 651
           +      R + A  +   M E+G    + TYT +++ L R       +  FHK+ +  L 
Sbjct: 666 DGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLK 725

Query: 652 FNI 654
           F I
Sbjct: 726 FEI 728



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 208/446 (46%), Gaps = 18/446 (4%)

Query: 129 WHSLLKNLCS---SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++SL+ +LC    S  + ++ +++ +   K ++     + YSIL+H      +  +   L
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI-----ISYSILLHGYATEGRFVDMNNL 434

Query: 186 SQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
                   +      +N LI+A A+   +++AL + ++MR  G   + + Y+ VI +L R
Sbjct: 435 FHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCR 494

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG--MAQGVGLSP 298
             ++  ++ +KL + I    ++ +  + + +I GF   GD  KA   +   M QG+   P
Sbjct: 495 MGRLADAM-EKLSQMISIG-LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP-RP 551

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               ++++I +L N GR + A+ VF  +   G +P    +N+L+ GY  +G +  A  V+
Sbjct: 552 NITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVL 611

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M  +G  PD  TYS LI+ Y  +GR +   I+ +EM     KP +  YS +L G    
Sbjct: 612 DAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRA 671

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G      ++  EM  SG       Y +++    + NC   A+  F ++ +  ++ +    
Sbjct: 672 GRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAIL 731

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NT+I   +K  R + A +LF  +   G  P  +TY +MI  L ++   E+   +  +M  
Sbjct: 732 NTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEK 791

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDA 564
            G  P+      ++ +  Q G    A
Sbjct: 792 TGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 149/334 (44%), Gaps = 11/334 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF- 183
           ++HSL++  C+    I  A  +VS +    +       +S +IH+L   GR     + F 
Sbjct: 519 VYHSLIQGFCTHGDLIK-AKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            ++    R    T+N+LI        ++KA  ++  M   G   D + YS +I    ++ 
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +ID  L+  L++E+ C +++      + V+ G  +AG  S A +        G +   +T
Sbjct: 638 RIDDGLI--LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  +  T EA  +F +L    LK      N ++    K+   ++A  + + + 
Sbjct: 696 YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            SG++P+  TY ++I      G  E A I+   ME +   P+S + + I+     +GE  
Sbjct: 756 ASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIV 815

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKY 453
           +    + ++  + +  +    +++I  F   G+Y
Sbjct: 816 KAGYYMSKVDGTIISLEASTTSLLISLFASKGRY 849



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 426 QVLKEMKSSGVEPDT-HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++ +E     V P T H Y +++D   +        A F R+L  G+  D I  NT + C
Sbjct: 150 RICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKC 209

Query: 485 HFKCGRYDRA-EELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQGLL 542
                R D A   L   M E G  P   +YN +I +L G     E +  LL   +  G  
Sbjct: 210 LCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCS 269

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+VV+YT ++      G F      +EG   +A N F  M   G+ P+ +  NS+++A  
Sbjct: 270 PDVVSYTMVI-----HGLF------MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALC 318

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           + +   +A  VL+ M +N ++PD VTYT ++
Sbjct: 319 KARAMDKAELVLRQMFDNSIQPDEVTYTAMI 349


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 194/448 (43%), Gaps = 33/448 (7%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLG 289
           YS++I  L R  ++  S     +  I      ++  ++N ++ G        +AM   L 
Sbjct: 101 YSILIGCLCRMGRLKHSF--ATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQ 158

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES---GLKPRTKAYNALLKGYV 346
               +G +P T +Y+ ++    N  R  EA  +   +         P    Y  ++ G  
Sbjct: 159 RMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLC 218

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K      AE V  +M  +GV P+  TY+ LI  Y + G+W+    +L++M     KP+ +
Sbjct: 219 KAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCY 278

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y  +L       E      ++ E   +G+ PD H +N+    + K   +  AM  F++M
Sbjct: 279 TYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM 335

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G+ P+ + +  LID   K GR D AE  F +M   G  P    +N ++  L   ++W
Sbjct: 336 RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKW 395

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLV----------------DIYGQSGRFDDAIE---- 566
           E  + L+  M  QG+ PN V + TL+                D+    G   DA      
Sbjct: 396 ERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPL 455

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               CL G +D+A   F  M + GL P+ +  N+L++ +    R  +A+ + + M   G+
Sbjct: 456 ISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGV 515

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            P VVTY T++  L +  +F +    YL
Sbjct: 516 TPGVVTYNTILHGLFQTKRFSEAKELYL 543



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 220/485 (45%), Gaps = 25/485 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAF-LLSQRQ---RLTP--LTYNALISACARNDDLEKALNLM 216
           +++ + L+  L   +++ EA  +L QR      TP  ++Y+ L+      +  E+AL L+
Sbjct: 133 DIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELL 192

Query: 217 SKMRQD-GYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
             M  D G  C  + + Y+ VI  L +    D +  + +++++  + ++ +    N +I 
Sbjct: 193 RMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRA--EGVFQQMIDNGVKPNNDTYNCLIH 250

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G+   G   + ++ L      GL P   TY +++  L       E  +  + + E+GL P
Sbjct: 251 GYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALS---EMHSFLDLMVENGLSP 307

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N     Y K G +  A  + ++M + G+ P+   Y  LIDA    GR + A +  
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M      PN  +++ ++ G     +W+R  +++ EM   G+ P+  F+N +I      
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +       D M   G+ PD  ++  LI  +   GR D AE++F+ M   G  P   TY
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTY 487

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +++      R +D   L   M  +G+ P VVTY T++    Q+ RF +A E       
Sbjct: 488 NTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE------- 540

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                +  M   G K      N ++N   +     EAF + Q +   GL+ +++T+T ++
Sbjct: 541 ----LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596

Query: 634 KALIR 638
            AL++
Sbjct: 597 GALLK 601



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 205/444 (46%), Gaps = 20/444 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI         ++ + ++ KM   G   D   Y  ++  L   +++ S L   L  
Sbjct: 244 TYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFL--DLMV 301

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E   + +  D  + N     +AK G   KAM      +  GLSP    Y A+I AL   G
Sbjct: 302 E---NGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 358

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +AE  F ++   G+ P    +N+L+ G   +   + AE +V EM   G+ P+   ++
Sbjct: 359 RVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFN 418

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    N GR    R ++  ME    +P++F Y+ +++GY   G      +V   M S 
Sbjct: 419 TLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI 478

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P    YN ++  +   + +  A   F  ML +G+ P  +T+NT++   F+  R+  A
Sbjct: 479 GLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 538

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +EL+  M   G      TYNI++N L +    ++  ++  ++ ++GL  N++T+T ++  
Sbjct: 539 KELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGA 598

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             + GR +DA++            F  +  +GL P+ +    +     E+    E  ++ 
Sbjct: 599 LLKGGRKEDAMD-----------LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLF 647

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
             M++NG  P+    + ++ AL+R
Sbjct: 648 SAMEKNGTAPN----SQMLNALVR 667



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/395 (20%), Positives = 166/395 (42%), Gaps = 8/395 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           ID A  + + +++H L  +  + Y  LI AL   GR +     F     + +TP  + +N
Sbjct: 325 IDKAMDIFNKMRQHGLSPNV-VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           +L+      D  E+A  L+ +M   G   + + ++ +I +L    ++     ++L   +E
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG--RRLIDLME 441

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D      +I G+  AG   +A +       +GLSP   TY  ++    ++ R  
Sbjct: 442 HVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 501

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F E+   G+ P    YN +L G  +     +A+ +   M  SG   D +TY++++
Sbjct: 502 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 561

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +    +   + A  + + +     + N   ++ ++      G  +    +   + ++G+ 
Sbjct: 562 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 621

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y ++ +   +   L    + F  M   G  P++   N L+      G   RA   
Sbjct: 622 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 681

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
             ++ ER +    +T +++I++    E     K L
Sbjct: 682 LSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 233/530 (43%), Gaps = 54/530 (10%)

Query: 167 SILIHALGRSEKLYEA----FLLSQRQRLTPL----TYNALISACARNDD---------- 208
           S +IH L RS +L +A      + +R  ++ L    + ++  S C  ND           
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176

Query: 209 ----LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
               L +A    + +R  G+       + +I SL R   ++  L   +Y+EI    + ++
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE--LAWGVYQEISRSGVGIN 234

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
              LN ++    K G   K   FL   Q  G+ P   TY  +I+A S+ G   EA  +  
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANA 383
            +   G  P    YN ++ G  K G  + A+ V +EM RSG+ PD  TY SLL++A    
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
              E+ + V  +M      P+   +S +++ +   G   +       +K +G+ PD   Y
Sbjct: 355 DVVETEK-VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR--YDRAEELFEEM 501
            ++I  + +   +  AM   + ML +G   D +T+NT++  H  C R     A++LF EM
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL--HGLCKRKMLGEADKLFNEM 471

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ER  FP + T  I+I+   +    ++   L   M+ + +  +VVTY TL+D +G+ G  
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531

Query: 562 DDAIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSL 597
           D A E    +  + +                      AFRV   M +  +KP+ +  NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  +      ++  + L+ M   G  PD ++Y TL+   +R +   K F 
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/478 (23%), Positives = 209/478 (43%), Gaps = 28/478 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N +++A  ++  +EK    +S++++ G + D + Y+ +I + +    ++ +   +L  
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF--ELMN 294

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +            N VI G  K G   +A          GLSP + TY +++      G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +E E VF +++   + P    +++++  + + G L  A    + ++ +G++PD   Y+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI  Y   G    A  +  EM       +   Y+ IL G   R       ++  EM   
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + PD++   ++ID   K   L +AM  F +M  + I  D +T+NTL+D   K G  D A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +E++ +M  +   P   +Y+I++N L  +    +  R+   M ++ + P V+   +++  
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594

Query: 555 YGQSGRFDDAIECLEGLSDQAV---------------------NAFRVMRT-----DGLK 588
           Y +SG   D    LE +  +                        AF +++       GL 
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P     NS+++ F    +  EA  VL+ M E G+ PD  TYT ++   +  D   + F
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/523 (22%), Positives = 219/523 (41%), Gaps = 52/523 (9%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
           ++LA+ V   + +  +  +   L +I+++AL   G+ EK+       Q + + P  +TYN
Sbjct: 216 VELAWGVYQEISRSGVGINVYTL-NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS----------- 246
            LISA +    +E+A  LM+ M   G+      Y+ VI  L +  K +            
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334

Query: 247 ----------SLL------------QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
                     SLL            +K++ ++    +  D    + ++  F ++G+  KA
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           + +    +  GL P    Y  +I      G    A  +  E+ + G       YN +L G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
             K   L +A+ + +EM    + PD +T ++LID +   G  ++A  + ++M+    + +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ +L G+   G+     ++  +M S  + P    Y+++++       L  A   +D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M+S+ I+P  +  N++I  + + G     E   E+M   G+ P   +YN +I     +E
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634

Query: 525 RWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
                  L+  M  +  GL+P+V TY +++  +           C +    +A    R M
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF-----------CRQNQMKEAEVVLRKM 683

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
              G+ P       +IN F       EAF +   M + G  PD
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 10/367 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F    S   VP  +  S + +L + + ++D A    + +++  L     ++Y+ILI    
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-NVIYTILIQGYC 421

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R   +  A      +L Q   +  +TYN ++    +   L +A  L ++M +     D  
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
             +++I    +   + +++  +L+++++  +I LD    N ++ GF K GD   A     
Sbjct: 482 TLTILIDGHCKLGNLQNAM--ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                 + P   +Y+ ++ AL + G   EA  V++E+    +KP     N+++KGY + G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK--PNSFI 407
              D E  + +M   G +PD  +Y+ LI  +        A  ++K+ME       P+ F 
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ IL G+  + + +    VL++M   GV PD   Y  MI+ F   + L  A    D ML
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719

Query: 468 SEGIEPD 474
             G  PD
Sbjct: 720 QRGFSPD 726


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 229/478 (47%), Gaps = 21/478 (4%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E+ Y+ILIH+L +   + +A  +  R R     +T   YN+LI+   ++D+  +A  L++
Sbjct: 370 EVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLN 429

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G      +YS +I  L R   + S++  +L++E+  + +  +      +I GF K
Sbjct: 430 EMVEKGLAPSAASYSPLIAGLCRKGDLASAM--ELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+  +A R         + P   T+  +I      G   +A  +++++ + GL P    
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547

Query: 338 YNALLKGY-VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           Y +L+    + +G +K  EF V ++E + V+ +  + + L+  +   GR      +  EM
Sbjct: 548 YRSLISVLCLTLGAMKAKEF-VDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                K +   ++ I+       + ++   + +EMK  GV+PD  F+  MID   K   +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  +D+M+++G  P+ +T+  LI+   K G    A+ L EEM    + P + TYN  
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCF 726

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           ++ L  +   E  K L   +  +G L N VT+ TL+  + ++G+   AI+ ++  ++   
Sbjct: 727 LDFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTES-- 783

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                    G  P  ++ +++IN   +     +AF +   M   GLKPD+V Y  L++
Sbjct: 784 ---------GFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 208/475 (43%), Gaps = 34/475 (7%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           + + YN L+    RN+ + +A+ + + M + G   D + Y  ++    RT +++ +L   
Sbjct: 229 SAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMAL--- 285

Query: 252 LYKEIECDKIEL----DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
              E+  D + L         + ++ G  K G   KA R       +G+ P      A+I
Sbjct: 286 ---EMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALI 342

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L    R  EAE +F  +   GL+P    Y  L+    K G + DA  +   M   G+ 
Sbjct: 343 DKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIR 402

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
              + Y+ LI+ Y     +  AR +L EM      P++  YS ++AG   +G+     ++
Sbjct: 403 VTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMEL 462

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            +EM  +GV  + + +  +I  F K   +  A   FD+M+   + P+ +T+N +I+ + +
Sbjct: 463 HREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCR 522

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G   +A +L+++M +RG  P   TY  +I++L         K  + ++    ++ N  +
Sbjct: 523 VGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFS 582

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVN------------------------AFRVMR 583
            TTL+  + + GR  +     + +  + V                          FR M+
Sbjct: 583 LTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMK 642

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             G+KP N+    +I+   +++   +A      M  +G  P+VVTYT L+  L +
Sbjct: 643 EKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCK 697



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 149/348 (42%), Gaps = 11/348 (3%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y A I A         A  +   ++  G+K     YN L+ G  +   + +A  V + M
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G++ DE TY  L+  +      E A  +  +M   H  P+    S ++ G R RG  
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            + F++   +   G+ P+    N +ID   K      A   F  M + G+EP+ +T+  L
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    K G  D A  +F+ M+E+G       YN +IN   + + +   + LL  M  +GL
Sbjct: 377 IHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGL 436

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+  +Y+ L+           A  C +G    A+   R M  +G+  +     +LI+ F
Sbjct: 437 APSAASYSPLI-----------AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGF 485

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +D    EA  +   M ++ + P+ VT+  +++   RV    K F  Y
Sbjct: 486 CKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 137/324 (42%), Gaps = 11/324 (3%)

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +A  V      SG+  +    + +L   +K+     A  +  EM +     DE+ Y+
Sbjct: 140 RARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYT 199

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             I AY      + AR +L  ME    K ++  Y+ ++ G           +V   M   
Sbjct: 200 AGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER 259

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D   Y  ++  F +   L  A+   D MLS    P   + + ++D   K G  D+A
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L   + E G  P     N +I+ L +  R+ + +RL   M  +GL PN VTY  L+  
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHS 379

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             + G  DDA+ C+          F  MR  G++ +    NSLIN + +     +A  +L
Sbjct: 380 LCKRGMMDDAL-CM----------FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
             M E GL P   +Y+ L+  L R
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCR 452



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 43/280 (15%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++++++A   L   EK+   F   + + + P  + +  +I   ++ +++ +ALN   KM 
Sbjct: 618 FTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DG   + + Y+++I  L ++  + S+       +I C+          +++VG      
Sbjct: 678 ADGCSPNVVTYTVLINHLCKSGYLSSA-------QILCE----------EMLVG------ 714

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                RFL         P + TY   +  L+N G   +A+ +   + E G    T  +N 
Sbjct: 715 -----RFL---------PNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNT 759

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+KG+ K G ++ A  ++     SG  PD  +YS +I+     G    A  +  EM    
Sbjct: 760 LIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
            KP+   Y+ ++      GE+ +   +  +M +     DT
Sbjct: 820 LKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDT 859


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 245/524 (46%), Gaps = 24/524 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           ++ +L++LC+    +D A  +   L++  +     + YS L+  L + ++L  A  LL +
Sbjct: 161 YNIVLRSLCA-RGDLDRAVTLFDSLRRRQVAPDC-ITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 188 RQR--LTP--LTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTN 242
             R  + P  + YNAL+  C +  + EK + +  K+ +D G   +   Y++++  L +  
Sbjct: 219 MPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +     + ++++ +  + ++ D      +I G  ++GD   A R        GL    A 
Sbjct: 279 RFKE--VGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y +++     +GR  EA   ++    +GL+   + YN ++KG    G + +A  +   +E
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLE 395

Query: 363 RS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +    +PD  T+  LI      G    A  + +E  VS  + + F YS ++ G  + G  
Sbjct: 396 KDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRL 455

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +V ++M   G +P++H YN +I  F +      A+  + +M   G  P  IT+NTL
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTL 515

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K  +Y  A  +  EM E G+ P  TTY  +I  L   ++ +D   +   +  +GL
Sbjct: 516 IDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGL 575

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL-NSLINA 600
             +V+ +  L  I+G          C  G  D+A++ F  M+     P NL   N+L++ 
Sbjct: 576 KVDVMMHNIL--IHGL---------CSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             E     +A  +   + E+GL+PD+++Y T +K L   D+ H+
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 211/481 (43%), Gaps = 61/481 (12%)

Query: 189 QRLTP--LTYNALI-SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           +R+ P   TYN ++ S CAR D L++A+ L   +R+     D I YS ++  L + +++D
Sbjct: 152 RRIAPNLQTYNIVLRSLCARGD-LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLD 210

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYA 304
            +L   L  E+    ++ D    N ++ G  KAG+  K MR    + +  G  P  ATY 
Sbjct: 211 HAL--DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            ++  L   GR  E   V+E +  + L+P    Y  L+ G  + G +  A  V SE+ ++
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G++ D   Y+ L+  +  AGR + A                F  S   AG R+     RT
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAW--------------KFWDSAGFAGLRN----LRT 370

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLID 483
                             YN+MI        +  A+  +D +  +    PDT+T+ TLI 
Sbjct: 371 ------------------YNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              + G  ++A  +FEE +  G      +Y+ MIN L    R  D  ++   M   G  P
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKP 472

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N   Y  L+  + Q  R  DA+     ++D           +G  P+ +  N+LI+   +
Sbjct: 473 NSHIYNALISGFCQVYRTSDAVRIYSKMAD-----------NGCSPTVITYNTLIDGLCK 521

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGE 663
            ++  EA +V + M ENG  PD+ TY +L++ L    K     S      I+K + Y G 
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALS------IWKQILYKGL 575

Query: 664 K 664
           K
Sbjct: 576 K 576



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 12/397 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSK 218
           + Y ILIH L RS  +  A  +      T L      YN+L+    +   +++A      
Sbjct: 300 ITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDS 359

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
               G   +   Y+++I+ L  +  +D +  L   L K++ C     D      +I G  
Sbjct: 360 AGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIP---DTVTFGTLIHGLC 415

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G A+KA      A+  G      +Y+++I  L N GR ++A  V+E++ + G KP + 
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YNAL+ G+ ++    DA  + S+M  +G  P   TY+ LID    A +++ A  V +EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +   P+   Y  ++ G     +      + K++   G++ D   +N++I        +
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 457 HHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
             A+  F  M   +   P+ +T+NTL+D  ++ G  D+A  L+  + E G  P   +YN 
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            I  L   +R  +  +LL  + ++G++P V+T+  LV
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 169/385 (43%), Gaps = 12/385 (3%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           RV  ++ ++   + A +++SL+K  C +     +  A   W             Y+I+I 
Sbjct: 320 RVYSEIIKTGLVIDAAMYNSLVKGFCQAGR---VQEAWKFWDSAGFAGLRNLRTYNIMIK 376

Query: 172 ALGRSEKLYEAF----LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
            L  S  + EA     LL +     P  +T+  LI    +N    KA  +  + R  G  
Sbjct: 377 GLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQ 436

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            D  +YS +I  L    ++  ++  K+Y++++ D  + +  + N +I GF +    S A+
Sbjct: 437 LDVFSYSSMINGLCNVGRLVDAV--KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAV 494

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           R        G SP   TY  +I  L  + +  EA +V  E+ E+G  P    Y +L++G 
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPN 404
                + DA  +  ++   G+  D   +++LI    +AG+ + A  V  +M E  +  PN
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ ++ G  + G   +   +   +   G+EPD   YN  I      + +H  +   D
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCG 489
            +LS GI P  ITWN L+    K G
Sbjct: 675 EVLSRGIIPTVITWNILVRAVIKYG 699



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 159/379 (41%), Gaps = 33/379 (8%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKES----GLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           +A +  LS   R I  +A  +  +      G  P  +++NALL  +V+     DA+   +
Sbjct: 84  SAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFA 143

Query: 360 EMERSG----VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +        + P+  TY++++ +    G  + A  +   +      P+   YS ++ G 
Sbjct: 144 SLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGL 203

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPD 474
             +        +L EM  SGV+PD   YN ++    K       M  +D+++ + G  P+
Sbjct: 204 AKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N ++D   K GR+    E++E M      P   TY I+I+ L      +   R+  
Sbjct: 264 LATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYS 323

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----------------------GL 571
            +   GL+ +   Y +LV  + Q+GR  +A +  +                       G+
Sbjct: 324 EIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGM 383

Query: 572 SDQAVNAFRVMRTD-GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            D+A+  + ++  D    P  +   +LI+   ++    +AF + +  + +G + DV +Y+
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYS 443

Query: 631 TLMKALIRVDKFHKVFSSY 649
           +++  L  V +       Y
Sbjct: 444 SMINGLCNVGRLVDAVKVY 462


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 232/503 (46%), Gaps = 23/503 (4%)

Query: 144 DLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           DL  A+V  L K+ L    +SY L+Y  +    G  +K +  FL    Q + P  L  N+
Sbjct: 31  DLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD--GEVDKAHCLFLEMMEQGVLPKILICNS 88

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +  +++KA +++ KM   G   D   YSL+I  L ++  +D +  +++ +++  
Sbjct: 89  IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA--ERVLEQMVE 146

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G++ +G  ++++R        G+ P      + I AL   GRT E
Sbjct: 147 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 206

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKM--GYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           A+ +F+ +   G KP   +Y+ +L GY       L D   + + M   G+ P++H +++L
Sbjct: 207 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 266

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+AYA  G  + A ++ ++M+     P++  ++ +++     G           M   GV
Sbjct: 267 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 326

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDRAE 495
            P    Y  +I     +  L  A      M+++ I P  + + +++I+   K GR    +
Sbjct: 327 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 386

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++ + M + G  P   T+N ++         E+   LL  M + G+ PN   Y TLVD Y
Sbjct: 387 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 446

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++GR DDA+             FR M   G+KP+++  + +++   + +R   A  +  
Sbjct: 447 CKNGRIDDAL-----------TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFH 495

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M E+G    + TY  ++  L R
Sbjct: 496 EMIESGTTVSIHTYGVVLGGLCR 518



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 214/488 (43%), Gaps = 37/488 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R    +  L ++ ++ ++G   D  +YSL I    +  ++D +    L+ 
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKA--HCLFL 72

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +     + N +I    K  +  KA   +      G++P   TY+ +I  L  S 
Sbjct: 73  EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +AE V E++ E+G +P +  YN+L+ GY   G   ++  V  +M   GV+P     +
Sbjct: 133 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 192

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE--WQRTFQVLKEMK 432
             I A    GR   A+ +   M +   KP+   YS +L GY    +        +   M 
Sbjct: 193 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ P+ H +N++I+ + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR D
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT-- 550
            A   F  M + G  P    Y  +I            K L+  M  + + P  V Y +  
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372

Query: 551 ---------------LVDIYGQSGR------FDDAIE--CLEGLSDQAVNAFRVMRTDGL 587
                          ++D+  Q+G+      F+  +E  CL G  ++A      M + G+
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK------ 641
           +P+     +L++ + ++ R  +A  V + M   G+KP  V Y+ ++  L +  +      
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492

Query: 642 -FHKVFSS 648
            FH++  S
Sbjct: 493 MFHEMIES 500



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 10/383 (2%)

Query: 166 YSILIHALGRS-----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           YS ++H    +       ++  F L   + + P    +N LI+A AR   ++KA+ +   
Sbjct: 226 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 285

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   D + ++ VI SL R  ++D +L  K    ++   +     +   +I G    
Sbjct: 286 MQNKGMIPDTVTFATVISSLCRIGRLDDAL-HKFNHMVDIG-VPPSEAVYGCLIQGCCNH 343

Query: 279 GDASKAMRFLGMAQGVGLSPKTATY-AAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           G+  KA   +       + P    Y +++I  L   GR  E + + + + ++G +P    
Sbjct: 344 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVT 403

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N+L++GY  +G +++A  ++  M   G+ P+ + Y  L+D Y   GR + A  V ++M 
Sbjct: 404 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 463

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP S +YS IL G           ++  EM  SG     H Y V++    + NC  
Sbjct: 464 HKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTD 523

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A    +++ +  ++ D IT+N +I   FK GR   A+ELF+ +   G  P   TY++MI
Sbjct: 524 EANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 583

Query: 518 NLLGEQERWEDVKRLLGNMRAQG 540
             L ++E +E+   L  ++   G
Sbjct: 584 TNLIKEESYEEADNLFISVEKSG 606



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  HTY++LID Y    R +    ++  +  +   P+ F YS ++ G+   GE  +   +
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM   GV P     N +I    K   +  A +   +M+  GI PD  T++ +ID   K
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               D+AE + E+M E G  P + TYN +I+       W +  R+   M + G++P V  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 548 YTTLVDIYGQSGRFDDAIEC------LEGLSDQAV---------------------NAFR 580
             + +    + GR ++A +C      L+G     +                     N F 
Sbjct: 191 CNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 249

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV- 639
           +M T G+ P+    N LINA+       +A  + + M+  G+ PD VT+ T++ +L R+ 
Sbjct: 250 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309

Query: 640 ---DKFHK 644
              D  HK
Sbjct: 310 RLDDALHK 317


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 211/487 (43%), Gaps = 26/487 (5%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNL 215
           HN  +S  L ++ L  AL    ++     L ++   + + +N L+++ A+       L+L
Sbjct: 13  HNTFHSKPLHFNTLDEALSTFNRM-----LHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL 67

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIV 273
             +M   G   D    ++VI SL   N++D   S L K+ K       + D      +I 
Sbjct: 68  SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH----QPDATTFTTLIR 123

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G    G   +A+       G G  P   TY  +I  L    +  EA  +F E+   G+ P
Sbjct: 124 GLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISP 183

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN+L+ G  K+   K    +++EM  S ++PD  T + ++DA    G    A  V+
Sbjct: 184 NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVV 243

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M     +PN   Y+ ++ G+  R E     +V   M       +   YN +I+ + K 
Sbjct: 244 DMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKI 303

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTT 511
             +  AM  F+ M  + + P+T+T+NTLI   CH   GR   A  LF EM  RG  P   
Sbjct: 304 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV--GRLQDAISLFHEMVARGQIPDLV 361

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY  + + L +    +    LL  +      P++  YTT++D   ++G  +DA +    L
Sbjct: 362 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S +           GL+P+    N +I+   +    AEA  +   M +NG  P+  TY  
Sbjct: 422 SSK-----------GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 470

Query: 632 LMKALIR 638
           + +  +R
Sbjct: 471 ITRGFLR 477



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 144/602 (23%), Positives = 245/602 (40%), Gaps = 99/602 (16%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           +++L+   C  N  +D+A  V   +  H  C +  + Y+ LI+   + + + +A  L + 
Sbjct: 258 YNALMDGHCLRNE-VDVAVKVFDTMV-HKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             RQ LTP  +TYN LI        L+ A++L  +M   G   D + Y  +   L +   
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D ++   L K IE    + D Q+   ++ G  +AG+   A          GL P   TY
Sbjct: 376 LDKAM--ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 433

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G   EA  +F E+ ++G  P    YN + +G+++         ++ EM  
Sbjct: 434 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 493

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVL------------------------------ 393
            G   D  T +LL+   ++ G  +S + +L                              
Sbjct: 494 RGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLH 553

Query: 394 ----------------KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
                             M   H  P++  ++++L        +     +  +M S G+ 
Sbjct: 554 SRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP 613

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD +  N++I++F     L +A +   ++L  G +PD +T+ TL++   K          
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------- 663

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
              M  +G  P   TYN +I+ L     W+ V  LL  M    ++PNVV ++T+VD   +
Sbjct: 664 ---MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 558 SGRF---DDAIE---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            G      D ++                     CL    D+AV  F  M   G  P+  +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVF 646
            N LIN + + QR  +A  +L+ M   GL  D VTY TL+  L  V +       FH++ 
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 647 SS 648
           +S
Sbjct: 841 AS 842



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 221/560 (39%), Gaps = 99/560 (17%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L    K+ EA  L  +   +   P  +TY  LI+   ++  + +A N+ S+M 
Sbjct: 118 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI 177

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ +I  L +    +   +  L  E+   KI  D   LN V+    K G 
Sbjct: 178 TKGISPNIVTYNSLIHGLCKL--CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 235

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
            ++A   + M    G+ P   TY A++                                 
Sbjct: 236 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 295

Query: 310 LSNSGRTIE----AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           L N    I+    A  +FEE+    L P T  YN L+ G   +G L+DA  +  EM   G
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            +PD  TY  L D        + A  +LK +E S+  P+  IY+ IL G    GE +   
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +   + S G++P+   YN+MI    K   L  A   F  M   G  P+  T+N +    
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF 475

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL-----------G 534
            +     R  EL EEM  RG+    +T  +++ +L +    + VK++L            
Sbjct: 476 LRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGT 535

Query: 535 NMRAQGLL-----------------------------------PNVVTYTTLVDIYGQSG 559
            MR+   L                                   P+ V +T L+    +  
Sbjct: 536 QMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMK 595

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            +   +     LS Q       M + G+ P    LN LIN+F   +R   AF+VL  + +
Sbjct: 596 HYSTVLS----LSTQ-------MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK 644

Query: 620 NGLKPDVVTYTTLMKALIRV 639
            G +PDVVTY TLM  L ++
Sbjct: 645 LGFQPDVVTYGTLMNGLCKM 664



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 217/534 (40%), Gaps = 78/534 (14%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+IH L +   L EA   F    +   +P   TYN +     RN++  + + L+ +M 
Sbjct: 433 YNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 492

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE------------------ 262
             G+  D    +L++  L+  + +D S+ Q L K     +                    
Sbjct: 493 ARGFSVDVSTTTLLVGMLSD-DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNS 551

Query: 263 ----------LDGQL-----------------LNDVIVGFAKAGDASKAMRFLGMAQGVG 295
                     LD  L                    ++   AK    S  +         G
Sbjct: 552 LHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG 611

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   T   +I +  +  R   A +V  +L + G +P    Y  L+ G  KM       
Sbjct: 612 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKM------- 664

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
                    G+ PD  TY+ LI A  N   W+    +L EM  S   PN  ++S ++   
Sbjct: 665 ------ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G       V+  M   GVEPD   Y  ++D     + +  A+  FD M+ +G  P+ 
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 778

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
            ++N LI+ + +  R D+A  L E+M  +G    T TYN +I+ L    R +    L   
Sbjct: 779 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 838

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M A G +P++VTY  L+D   ++    +A+  L+ +    ++A        +   N+A++
Sbjct: 839 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDA-------DILVYNIAID 891

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +  A GE +   + F+ L      GL+PDV TY  ++  L +   +D+ +K+F
Sbjct: 892 GMCRA-GELEAARDLFSNLS---SKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 173/424 (40%), Gaps = 8/424 (1%)

Query: 160 YSYELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           Y+  ++ + L H L R +  + A   +L    +    T+  LI        + +AL+L  
Sbjct: 81  YTLAIVINSLCH-LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 139

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM  +G+  + + Y  +I  L +  ++  +    ++ E+    I  +    N +I G  K
Sbjct: 140 KMIGEGFQPNVVTYGTLINGLCKDRQVTEAF--NIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             +       +       + P   T   V+ AL   G   EA  V + +   G++P    
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YNAL+ G+     +  A  V   M     + +  +Y+ LI+ Y      + A  + +EM 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN+  Y+ ++ G    G  Q    +  EM + G  PD   Y  + D   K   L 
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AMA    +     +PD   + T++D   + G  + A +LF  +  +G  P   TYNIMI
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + L +Q    +  +L   M   G  PN  TY  +   +    R ++A+  +E L +    
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGF---LRNNEALRTIELLEEMLAR 494

Query: 578 AFRV 581
            F V
Sbjct: 495 GFSV 498



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 13/333 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA + F  +      P T  +N LL    K  +      +  +M+  G+ PD +T +++I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 378 DAYANAGRWESARIVL-KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ++  +  R + A   L K +++ H +P++  ++ ++ G    G+      +  +M   G 
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGH-QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+   Y  +I+   K   +  A   F  M+++GI P+ +T+N+LI    K   +     
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L  EM +    P   T N +++ L ++    +   ++  M  +G+ PNVVTY  L+D + 
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH- 265

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     CL    D AV  F  M       + ++ N+LIN + + Q   +A  + + 
Sbjct: 266 ----------CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           M    L P+ VTY TL+  L  V +     S +
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 348



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 147/350 (42%), Gaps = 15/350 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N LI++      L  A ++++K+ + G+  D + Y               +L+  L K
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYG--------------TLMNGLCK 663

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I    I  D    N +I       +       L       + P    ++ V+ AL   G
Sbjct: 664 MIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  V + + + G++P    Y AL+ G+     + +A  V   M   G +P+  +Y+
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI+ Y    R + A  +L++M +     ++  Y+ ++ G    G  Q    +  EM +S
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD   Y +++D   K + L  AM     +    ++ D + +N  ID   + G  + A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            +LF  +  +G  P   TYNIMI+ L ++   ++  +L   M    +  N
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 4/301 (1%)

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           +N + KM   G   D   Y+ +I +L   N  +   +  L  E+   KI  +  + + V+
Sbjct: 658 MNGLCKMITKGISPDIFTYNSLIHALC--NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 715

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
               K G  + A   + M    G+ P   TY A++          EA  VF+ +   G  
Sbjct: 716 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 775

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  ++YN L+ GY ++  +  A  ++ +M   G++ D  TY+ LI    + GR + A  +
Sbjct: 776 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 835

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGE-WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
             EM  S   P+   Y RIL  Y  +         +LK ++ S ++ D   YN+ ID   
Sbjct: 836 FHEMVASGQIPDLVTY-RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 894

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +   L  A   F  + S+G++PD  T+N +I    K G  D A +LF +M E   +  +T
Sbjct: 895 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNST 954

Query: 512 T 512
           +
Sbjct: 955 S 955



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 11/193 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A++ F+RML +   P T+ +N L+    K   +     L  +M   G  P   T
Sbjct: 23  FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 82

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             I+IN L    R +     L  +   G  P+  T+TTL  I G          C+EG  
Sbjct: 83  LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL--IRGL---------CVEGKI 131

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F  M  +G +P+ +   +LIN   +D++  EAF +   M   G+ P++VTY +L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 633 MKALIRVDKFHKV 645
           +  L ++ ++  V
Sbjct: 192 IHGLCKLCEWKHV 204



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 10/227 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY AL+       ++++A+ +   M   G   +  +Y+++I    +  ++D ++   L 
Sbjct: 744 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM--GLL 801

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++    +  D    N +I G    G    A+         G  P   TY  ++  L  +
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 861

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  + + ++ S L      YN  + G  + G L+ A  + S +   G+ PD  TY
Sbjct: 862 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 921

Query: 374 SLLIDAYANAGRWESARIVLKEME--------VSHAKPNSFIYSRIL 412
           +++I      G  + A  + ++M+         S     S IY +I+
Sbjct: 922 NIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIM 968


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 232/483 (48%), Gaps = 29/483 (6%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G+   +     L    + + + P   +Y   I    +    ++A +++ KM 
Sbjct: 209 YSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME 268

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + ++++IQ L    ++  +  + ++ +++    + D      ++     +GD
Sbjct: 269 DSGCKPDVVTHTVIIQVLCDAGRLSDA--KAVFWKMKASDQKPDRVTYITLLDKCGDSGD 326

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   +         G +    +Y AV+ AL   GR  EA AVF+E+KE G+ P   +YN+
Sbjct: 327 SQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNS 386

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K      A  + + M   G  P+ +T+ L I+ Y  +G+   A    + M+   
Sbjct: 387 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 446

Query: 401 AKP-----NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
             P     N+ +YS  LAG    G  +R F    E+K+ GV PDT  Y +MI    K + 
Sbjct: 447 IVPDVAAANAVLYS--LAGSGRLGMAKRVFY---ELKAMGVSPDTITYTMMIKCCSKASK 501

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
              AM  F  M+  G  PD +  N+LID  +K G+ + A +LF +++E    P   TYN 
Sbjct: 502 ADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNT 561

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +++ LG + + ++V +LL  M      PN++TY T++D   ++G  + AI+ L  ++++ 
Sbjct: 562 LLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEK- 620

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                     G  P   + N+++    +++R  EAF +   MK+  L PD  T  T++ +
Sbjct: 621 ----------GCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPS 669

Query: 636 LIR 638
            ++
Sbjct: 670 FVK 672



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 212/480 (44%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+ A GR   + + F L Q+Q  +    T+  +         L  A   +  MR+ G   
Sbjct: 110 LMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSL 169

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ +I  L ++   D+  ++ +YK +  D I    +  + ++V F K  D    + 
Sbjct: 170 NAYTYNGLIYFLVKSG-FDAEAME-VYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLW 227

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  ++++SG KP    +  +++   
Sbjct: 228 LLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLC 287

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L DA+ V  +M+ S   PD  TY  L+D   ++G  +S   V   M       N  
Sbjct: 288 DAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIV 347

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G       V  EMK  G+ P+ + YN +I  F K +    A+  F+ M
Sbjct: 348 SYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            + G  P+  T    I+ + K G+  +A + +E M+ +G  P     N ++  L    R 
Sbjct: 408 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRL 467

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++ +           +D+A+N F  M   G
Sbjct: 468 GMAKRVFYELKAMGVSPDTITYTMMIKCCSKASK-----------ADEAMNFFSDMVESG 516

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LALNSLI+   +  +  EA+ +   +KE  ++P   TY TL+  L R  K  +V 
Sbjct: 517 CVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 576



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 217/506 (42%), Gaps = 84/506 (16%)

Query: 166  YSILIHALGRSEKLYEAF-LLSQRQR-LTP---LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LGR  K+ E   LL +  R + P   +TYN ++   ++N ++  A++++  M 
Sbjct: 559  YNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMT 618

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSL-------------------------------- 248
            + G   D  +Y+ V+  L +  +++ +                                 
Sbjct: 619  EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKE 678

Query: 249  -LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
             L  + + I      +D    + ++ G  K     K++ F       G+         +I
Sbjct: 679  ALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLI 738

Query: 308  TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
              L    + +EA  +F + K  G+  +T +YN+L++G V    +  AE + +EM+R G  
Sbjct: 739  RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798

Query: 368  PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            PDE TY+L++DA              K M V                       +   +V
Sbjct: 799  PDEFTYNLILDAMG------------KSMRV-----------------------EEMLKV 823

Query: 428  LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             KEM   G E     YN +I    K   L  A+  +  ++SEG  P   T+  L+D   K
Sbjct: 824  QKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLK 883

Query: 488  CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             G+   AE LF EM E G  P  T YNI++N        E+V +L   M  QG+ P++ +
Sbjct: 884  SGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKS 943

Query: 548  YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
            YT L+D    +GR +D + C           FR +   GL+P  +  N LI+  G+ +R 
Sbjct: 944  YTILIDTLCTAGRLNDGL-CY----------FRQLHELGLEPDLIVYNLLIDGLGKSERI 992

Query: 608  AEAFAVLQYMKENGLKPDVVTYTTLM 633
             EA ++   MK+ G+ P++ TY +L+
Sbjct: 993  EEAVSLFNEMKKKGIIPNLYTYNSLI 1018



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 210/465 (45%), Gaps = 47/465 (10%)

Query: 140  NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNA 198
            N +ID+ Y++       +L       Y+ +++ L + E+L EAF +  Q +++    Y  
Sbjct: 608  NCAIDMLYSMTEKGCAPDLSS-----YNTVMYGLIKEERLEEAFRMFCQMKKILAPDYAT 662

Query: 199  L---ISACARNDDLEKALNLMSK-MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            L   + +  +N  +++AL+ + + + + G + D  ++  +++ + +   ++ S+  +  +
Sbjct: 663  LCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSI--EFAE 720

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
             I    I L+   L  +I    K   A +A +     +G+G+S KT +Y ++I  L +  
Sbjct: 721  NIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDEN 780

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALL---------------------KGY-------- 345
                AE +F E+K  G  P    YN +L                     KGY        
Sbjct: 781  LIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYN 840

Query: 346  ------VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
                  VK   L+ A  +   +   G  P   TY  L+D    +G+   A  +  EM   
Sbjct: 841  TIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEY 900

Query: 400  HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              +PN  IY+ +L G+R  G  +   Q+ ++M   G+ PD   Y ++IDT      L+  
Sbjct: 901  GCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDG 960

Query: 460  MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +  F ++   G+EPD I +N LID   K  R + A  LF EM+++G  P   TYN +I  
Sbjct: 961  LCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH 1020

Query: 520  LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            LG+  +  +  ++   +  +G  P+V TY  L+  Y  SG  D+A
Sbjct: 1021 LGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNA 1065



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 175/388 (45%), Gaps = 42/388 (10%)

Query: 169  LIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
            LI  L + +K  EA  L  + +     L   +YN+LI      + ++ A +L ++M++ G
Sbjct: 737  LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 796

Query: 224  YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
               D   Y+L++ ++ ++ +++  L  K+ KE+     E      N +I G  K+    +
Sbjct: 797  CGPDEFTYNLILDAMGKSMRVEEML--KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQ 854

Query: 284  AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
            A+         G SP   TY  ++  L  SG+ ++AE +F E+ E G +P    YN LL 
Sbjct: 855  AIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLN 914

Query: 344  GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
            G+   G  ++   +  +M   G+ PD  +Y++LID    AGR                  
Sbjct: 915  GHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLN---------------- 958

Query: 404  NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
            +   Y                F+ L E+   G+EPD   YN++ID  GK   +  A++ F
Sbjct: 959  DGLCY----------------FRQLHEL---GLEPDLIVYNLLIDGLGKSERIEEAVSLF 999

Query: 464  DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            + M  +GI P+  T+N+LI    K G+   A +++EE+  +G+ P   TYN +I      
Sbjct: 1000 NEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVS 1059

Query: 524  ERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
               ++     G M   G  PN  TY  L
Sbjct: 1060 GSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 141/319 (44%), Gaps = 11/319 (3%)

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
           T++ N +L+     G + D   V   M++  V  +  T++ +       G   SA + L 
Sbjct: 101 TESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALP 160

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M  +    N++ Y+ ++      G      +V K M   G+ P    Y+V++  FGK  
Sbjct: 161 VMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR 220

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +   +   + M + G++P+  ++   I    +  R+D A  +  +M++ G  P   T+ 
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++I +L +  R  D K +   M+A    P+ VTY TL+D  G SG            S  
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGD-----------SQS 329

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            V  +  M  DG   + ++  ++++A  +  R  EA AV   MKE G+ P+  +Y +L+ 
Sbjct: 330 VVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLIS 389

Query: 635 ALIRVDKFHKVFSSYLFFN 653
             ++ D F +    +   N
Sbjct: 390 GFLKADMFDRALELFNHMN 408


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 220/495 (44%), Gaps = 79/495 (15%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNA+IS   + + +E A  ++++M+  G+  D + Y+++I SL    K+  +L       
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV----- 204

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                  LD  LL++ +                         P   TY  +I A    G 
Sbjct: 205 -------LDQLLLDNCM-------------------------PTVITYTILIEATIVEGG 232

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + EE+   GL P    YNA+++G  K G ++ A  +++ +   G  PD  +Y++
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+ A+ N G+W+    ++ EM     +PN   YS +++     G       VLK M    
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PDT+ Y+ +I    K   L  A+   D M+S G  PD + +NT++    K G  ++A 
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWE--DVKRLLG---NMRAQGLLPNVVTYTT 550
           E+F +++  G  P  ++YN MI+ L     W   D  R LG    M ++G+ P+ +TY +
Sbjct: 413 EIFNKLRGMGCPPNVSSYNTMISAL-----WSCGDRSRALGMVPAMISKGIDPDEITYNS 467

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+              C +GL ++A+     M   G +P+ ++ N ++    + +R  +A
Sbjct: 468 LISCL-----------CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKAL---------------------IRVDKFHKVFSSY 649
             +   M E G +P+  TY  L++ +                     I  D F ++  ++
Sbjct: 517 IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTF 576

Query: 650 LFFNIYKMLSYSGEK 664
              ++YK LS S  K
Sbjct: 577 PMLDVYKELSNSETK 591


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 215/509 (42%), Gaps = 35/509 (6%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNL 215
           HN  +S  L ++ L  AL    ++     L      + + +N L+++ A+        +L
Sbjct: 35  HNRFHSKSLNFNTLDDALSSFNRM-----LHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 89

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNK--IDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++M   G   D    +++I S    N+     S+L K+ K      ++ D      +I 
Sbjct: 90  SNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL----GLQPDTATFTTLIR 145

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G    G    A+       G G  P   TY  +I  L   G T  A  +   +++   +P
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 205

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y +++    K   + +A  + S+M   G+ PD  TY+ LI +  N   W+    +L
Sbjct: 206 DVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL 265

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M  S   P+  I+S ++      G+      V+  M   GVEP+   YN ++D     
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + +  A+  FD M+  G  P+ I++NTLI+ + K  R D+A  LFEEM ++   P T TY
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------- 566
           N +++ L    R +D   L   M A G +P++ TY  L+D   +    D+A+        
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 445

Query: 567 -----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            C  G  + A + F  + + GL+P+      +IN         E
Sbjct: 446 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  +   M  NG  PD  TY T+ + L++
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y ++I +  ++  + +A NL SKM   G   D   Y+ +I SL   N  +   +  L 
Sbjct: 208 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC--NLCEWKHVTTLL 265

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++   KI  D  + + V+    K G  ++A   + M    G+ P   TY A++      
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  VF+ +  +G  P   +YN L+ GY K+  +  A ++  EM +  ++P+  TY
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR-DRGEWQRTFQVLKEMK 432
           + L+    + GR + A  +  EM V+H +       RIL  Y   +        +LK ++
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEM-VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            S ++PD   Y ++ID   +   L  A   F  + S+G+ P+  T+  +I+   + G  D
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +LF EM   G  P   TYN +   L + +      +LL  M A+G   +V T T LV
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564

Query: 553 DI 554
           ++
Sbjct: 565 EM 566



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 173/409 (42%), Gaps = 7/409 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L    K+ +A  L  +   +   P  +TY  LI+   +  +   A+ L+  M 
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 199

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     D + Y+ +I SL +  ++  +    L+ ++    I  D      +I       +
Sbjct: 200 QGNCQPDVVVYTSIIDSLCKDRQVTEAF--NLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                  L       + P    ++ V+ AL   G+  EA  V + +   G++P    YNA
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     + +A  V   M  +G  P+  +Y+ LI+ Y    R + A  + +EM    
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  Y+ ++ G    G  Q    +  EM + G  PD   Y +++D   K + L  AM
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A    +    ++PD   +  +ID   + G  + A ++F  +  +G  P   TY IMIN L
Sbjct: 438 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +   ++  +L   M   G  P+  TY T+     Q+     AI+ L+
Sbjct: 498 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 546



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 190/410 (46%), Gaps = 9/410 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + +L+  LC   ++ + A  ++  +++ N C    ++Y+ +I +L +  ++ EAF L  +
Sbjct: 175 YGTLINGLCKVGNT-NAAIRLLRSMEQGN-CQPDVVVYTSIIDSLCKDRQVTEAFNLFSK 232

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              Q ++P   TY +LI +     + +    L+++M       D + +S V+ +L +  K
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I  +    +   +    +E +    N ++ G     +  +A++        G +P   +Y
Sbjct: 293 ITEA--HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 350

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I       R  +A  +FEE+ +  L P T  YN L+ G   +G L+DA  +  EM  
Sbjct: 351 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVA 410

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PD  TY +L+D        + A  +LK +E S+  P+  IY+ ++ G    GE + 
Sbjct: 411 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 470

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +   + S G+ P+   Y +MI+   +   L  A   F  M   G  PD  T+NT+  
Sbjct: 471 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 530

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
              +     RA +L +EM  RG+    +T  +++ +L + +  + VK++L
Sbjct: 531 GLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 580



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 159/352 (45%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++T+++ + +     ++  ++   G+ P     N L+  +  +     A  V
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G+ PD  T++ LI      G+   A  +  +M     +PN   Y  ++ G   
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      ++L+ M+    +PD   Y  +ID+  K   +  A   F +M+ +GI PD  T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + +LI        +     L  +M      P    ++ +++ L ++ +  +   ++  M 
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ PNVVTY  L+D +           CL+   D+AV  F  M  +G  P+ ++ N+L
Sbjct: 305 IRGVEPNVVTYNALMDGH-----------CLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 353

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + + QR  +A  + + M +  L P+ VTY TLM  L  V +     + +
Sbjct: 354 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 7/235 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   + +++ +A  L +   ++ L P  +TYN L+        L+ A+ L  +M 
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y +++  L + + +D ++   L K IE   ++ D Q+   VI G  +AG+
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAM--ALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          GL P   TY  +I  L   G   EA  +F E+  +G  P    YN 
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + +G ++      A  ++ EM   G   D  T +LL++   +    +S + +L E
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 177/368 (48%), Gaps = 11/368 (2%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G  K G  ++A+         G  P   TY  +I  L   G T  A  +F++++E+G
Sbjct: 51  LINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG 110

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
            +     Y+ L+    K   + +A  + S M+   + P   TY+ LI    N  RW+ A 
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEAS 170

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L EM   +  PN   ++ ++  +   G+      VLK M   GVEPD   YN ++  +
Sbjct: 171 ALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
             +  +  A   FD M+++G +PD  +++ LI+ + K  R D A++LF EM  +G  P  
Sbjct: 231 SMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNN 290

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +YN +I+ L +  R  + + L  NM   G LPN+ TY  L+D +           C +G
Sbjct: 291 VSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF-----------CKQG 339

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
              +A   FR M++  LKP+ +  N L+NA  +     +A  +   +   GL+P+V  YT
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 631 TLMKALIR 638
           T++  L +
Sbjct: 400 TIINGLCK 407



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 208/458 (45%), Gaps = 26/458 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N LI+   +   ++   ++++K  + G     + ++ +I  L +  K   ++  +L+ 
Sbjct: 12  TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV--ELFD 69

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     + D      +I G  K G+ + A       +  G      TY+ +I +L    
Sbjct: 70  DMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYR 129

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA  +F  +K   + P    Y +L++G       K+A  +++EM    ++P+  T++
Sbjct: 130 RVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFN 189

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D +   G+  +A  VLK M     +P+   Y+ ++ GY    E     ++   M + 
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G +PD   Y+++I+ + K   +  A   F+ M+ +G  P+ +++NTLI    + GR   A
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA 309

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           ++LF+ M   G  P   TY I+++   +Q       RL   M++  L PN+V Y  LV+ 
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNA 369

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
             +SG   DA E                        C EGL D+A+ AFR M  DG  P 
Sbjct: 370 MCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             + N +I  F + + ++ A  ++  M++ G   D  T
Sbjct: 430 EFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 15/318 (4%)

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +GL P T   N L+  + ++  +     V+++  + G+ P   T++ LI+     G++  
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +  +M     +P+ + Y+ I+ G    GE      + K+M+ +G + +   Y+ +I 
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGY 506
           +  KY  ++ A+  F  M ++ I P   T+ +LI   C+F   R+  A  L  EM     
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS--RWKEASALLNEMTSLNI 181

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   T+N++++   ++ +    + +L  M   G+ P+VVTY +L  +YG S  + + +E
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL--MYGYS-MWTEVVE 238

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                   A   F VM T G KP   + + LIN + + +R  EA  +   M   G  P+ 
Sbjct: 239 --------ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNN 290

Query: 627 VTYTTLMKALIRVDKFHK 644
           V+Y TL+  L ++ +  +
Sbjct: 291 VSYNTLIHGLCQLGRLRE 308



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 118/287 (41%), Gaps = 39/287 (13%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+L+   +   ++ +A  L   M   G   D  +YS++I    +  +ID +      
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA------ 274

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                       QL N++I                      G +P   +Y  +I  L   
Sbjct: 275 -----------KQLFNEMI--------------------HQGSTPNNVSYNTLIHGLCQL 303

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA+ +F+ +  +G  P    Y  LL G+ K GYL  A  +   M+ + + P+   Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L++A   +G  + AR +  E+ V   +PN  IY+ I+ G    G      +  + M+ 
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD--TITW 478
            G  PD   YNV+I  F ++     A+     M   G   D  T  W
Sbjct: 424 DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTAW 470



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 37/325 (11%)

Query: 73  DVLSLQKQR------YDFTPLLNFLSENSNSESASALASSPSSL----NRVEFK-LAESY 121
           D+ S  K +      + +T L+  L   S  + ASAL +  +SL    N V F  L +++
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195

Query: 122 RAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
                 L    +LK +       D    VV++   ++L Y Y +   ++      + KL+
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPD----VVTY---NSLMYGYSMWTEVV-----EARKLF 243

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           +  ++++  +    +Y+ LI+   +   +++A  L ++M   G   + ++Y+ +I  L +
Sbjct: 244 DV-MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGVG 295
             ++  +  Q L+K      +  +G L N      ++ GF K G   KA R     Q   
Sbjct: 303 LGRLREA--QDLFK-----NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           L P    Y  ++ A+  SG   +A  +F EL   GL+P  + Y  ++ G  K G L +A 
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAY 380
                ME  G  PDE +Y+++I  +
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGF 440


>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 243/551 (44%), Gaps = 73/551 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---------------CYSYELLYSILIHAL 173
           W    KN C+ N   D+   ++    +HN+               C      Y+ LI+A 
Sbjct: 151 WMKNQKNYCARN---DIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAH 207

Query: 174 GRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           GR+ +   A  +     R  + P   TYN LI+AC  + + ++ALN+  KM ++G   D 
Sbjct: 208 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 267

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-F 287
           + +++V+ +  R N+    L    ++ ++   I  D   LN VI    K G   KA+  F
Sbjct: 268 VTHNIVLSAYKRGNQYSKVL--SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIF 325

Query: 288 LGMAQGVG-LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
             M +      P   T+  +I   S  G+    +  F  +   GLKP   +YNAL+  Y 
Sbjct: 326 NSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYA 385

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G  K+A  V +E++++G  PD  +Y+ L++AY  +G+ E A  V + M  +H KPN  
Sbjct: 386 SHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLV 445

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP---------------------------- 438
            Y+ ++  Y  +G      ++L EM+ +GV+P                            
Sbjct: 446 SYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAA 505

Query: 439 -------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                  +T  YN  I ++        A++ +  M ++ ++PD +T+N LI    K  +Y
Sbjct: 506 ELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKY 565

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A    +EM +         Y+ +I    +Q +  + + +   M+  G  P+V+TYT +
Sbjct: 566 GEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAM 625

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y       D  E  E    +A   F  M TD ++P ++A +SL+ AF +  + A+  
Sbjct: 626 IHAY-------DVAENWE----KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVL 674

Query: 612 AVLQYMKENGL 622
            + ++M+E  +
Sbjct: 675 VLAEFMREKKI 685



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 27/372 (7%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +  +I  ++  G    +  VF  +K +     R   YN +++ + +   +  A  +  EM
Sbjct: 129 FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEM 188

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           ++    PD  TY+ LI+A+  AG+W  A  ++ +M  +   P+   Y+ ++      G W
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    V K+M  +GV PD   +N+++  + + N     ++ F+ M    I PDT T N +
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 482 IDCHFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           I C  K G+  +A ++F  M+E+    +P   T+  +I+L     + E+ +     M A+
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQA 575
           GL PN+V+Y  L+  Y   G   +A                             G  ++A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +  F +MR +  KP+ ++ N+LI+A+G      EA  +L  M+ NG++P++V+  TL+ A
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 636 LIRVDKFHKVFS 647
             R  +  K+ S
Sbjct: 489 CGRCGQKVKIKS 500



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 234/517 (45%), Gaps = 22/517 (4%)

Query: 142 SIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LT 195
           S++ +  V  W++ + N C   ++ Y+++I    R   + +A   F   Q+ R  P   T
Sbjct: 141 SLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+A  R      A+N+M  M +         Y+ +I +   +     +L   + K+
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL--NVCKK 257

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +  + +  D    N V+  + +    SK + +  + +G  + P T T   VI  L   G+
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317

Query: 316 TIEAEAVFEELKE--SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
             +A  +F  +KE  S   P    +  ++  Y   G +++ +   + M   G+ P+  +Y
Sbjct: 318 NGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSY 377

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI AYA+ G  + A  V  E++ +   P+   Y+ +L  Y   G+ ++  +V + M+ 
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +  +P+   YN +ID +G    L  A+     M   G++P+ ++  TL+    +CG+  +
Sbjct: 438 NHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVK 497

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            + +    + RG    TT YN  I        ++    L   MR + + P+ VTY  L+ 
Sbjct: 498 IKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLIS 557

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              +  ++ +A+  L+ + D  +             S    +S+I A+ +  +  EA ++
Sbjct: 558 GCCKMSKYGEALGFLDEMMDLKIPL-----------SKEVYSSVICAYSKQGQVTEAESM 606

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
              MK  G +PDV+TYT ++ A    + + K  + +L
Sbjct: 607 FTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 196/423 (46%), Gaps = 16/423 (3%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFL 288
           N+ L+I+ +T+   ++ S+  ++++ ++  K       + N +I   A+     +A    
Sbjct: 128 NFPLLIREITQIGSLEHSV--QVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF 185

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              Q     P   TY A+I A   +G+   A  + +++  + + P    YN L+      
Sbjct: 186 FEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 245

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+A  V  +M  +GV PD  T+++++ AY    ++       + M+ ++ +P++   
Sbjct: 246 GNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTL 305

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVE--PDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           + ++      G+  +   +   MK    E  PD   +  +I  +     + +   AF+ M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L+EG++P+ +++N LI  +   G    A  +F E+++ G+ P   +Y  ++N  G+  + 
Sbjct: 366 LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKP 425

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E   ++   MR     PN+V+Y  L+D YG  G   +A+E L             M  +G
Sbjct: 426 EKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE-----------MERNG 474

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++P+ +++ +L+ A G   +  +  +VL   +  G+K +   Y + + + + V ++ K  
Sbjct: 475 VQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKAL 534

Query: 647 SSY 649
           S Y
Sbjct: 535 SLY 537



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 227/486 (46%), Gaps = 22/486 (4%)

Query: 154 QKHNLCYSYELLYSILIH---ALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDD 208
           +K + CY   + ++ +IH     G+ E    AF  +L++  +   ++YNALI A A +  
Sbjct: 330 EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGM 389

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            ++A ++ ++++++G+H D ++Y+ ++ +  ++ K + ++  K+++ +  +  + +    
Sbjct: 390 DKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAM--KVFELMRRNHCKPNLVSY 447

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  +   G  ++A+  L   +  G+ P   +   ++ A    G+ ++ ++V    + 
Sbjct: 448 NALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAEL 507

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+K  T AYN+ +  Y+ +G    A  +   M    V PD  TY++LI       ++  
Sbjct: 508 RGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   L EM       +  +YS ++  Y  +G+      +  +MK  G  PD   Y  MI 
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            +        A A F  M ++ ++PD+I  ++L+    K G+  +   L E M+E+    
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             +++  M++       W ++  L+  M     + ++     L+   G+SG+ +  ++  
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLF 747

Query: 569 EGL--SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             +  S   +N +           ++ L +L+ A G  ++  E   VLQ+M+E GL+P V
Sbjct: 748 YKIVASGAEINFYTY---------SILLKNLLAA-GNWRKYIE---VLQWMEEAGLQPSV 794

Query: 627 VTYTTL 632
             Y ++
Sbjct: 795 GMYRSI 800



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 9/268 (3%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTPLT---YNALISACARNDDLEKALNLMSKMR 220
           Y++LI    +  K  EA  FL        PL+   Y+++I A ++   + +A ++ +KM+
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I +       + +    L+ E+E D ++ D    + ++  F K G 
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKA--SALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            +K +      +   +    +++  +++A S      E   + + ++ S         N 
Sbjct: 670 PAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQ 729

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G ++    +  ++  SG   + +TYS+L+     AG W     VL+ ME + 
Sbjct: 730 LLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAG 789

Query: 401 AKPNSFIYSRI--LAGYRDRGEWQRTFQ 426
            +P+  +Y  I   A  R   E+    Q
Sbjct: 790 LQPSVGMYRSISSFAQNRSGAEYAAVIQ 817


>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 243/551 (44%), Gaps = 73/551 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---------------CYSYELLYSILIHAL 173
           W    KN C+ N   D+   ++    +HN+               C      Y+ LI+A 
Sbjct: 151 WMKNQKNYCARN---DIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAH 207

Query: 174 GRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           GR+ +   A  +     R  + P   TYN LI+AC  + + ++ALN+  KM ++G   D 
Sbjct: 208 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 267

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-F 287
           + +++V+ +  R N+    L    ++ ++   I  D   LN VI    K G   KA+  F
Sbjct: 268 VTHNIVLSAYKRGNQYSKVL--SYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIF 325

Query: 288 LGMAQGVG-LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
             M +      P   T+  +I   S  G+    +  F  +   GLKP   +YNAL+  Y 
Sbjct: 326 NSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYA 385

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G  K+A  V +E++++G  PD  +Y+ L++AY  +G+ E A  V + M  +H KPN  
Sbjct: 386 SHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLV 445

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP---------------------------- 438
            Y+ ++  Y  +G      ++L EM+ +GV+P                            
Sbjct: 446 SYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAA 505

Query: 439 -------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                  +T  YN  I ++        A++ +  M ++ ++PD +T+N LI    K  +Y
Sbjct: 506 ELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKY 565

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A    +EM +         Y+ +I    +Q +  + + +   M+  G  P+V+TYT +
Sbjct: 566 GEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAM 625

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y       D  E  E    +A   F  M TD ++P ++A +SL+ AF +  + A+  
Sbjct: 626 IHAY-------DVAENWE----KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVL 674

Query: 612 AVLQYMKENGL 622
            + ++M+E  +
Sbjct: 675 VLAEFMREKKI 685



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 27/372 (7%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +  +I  ++  G    +  VF  +K +     R   YN +++ + +   +  A  +  EM
Sbjct: 129 FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEM 188

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           ++    PD  TY+ LI+A+  AG+W  A  ++ +M  +   P+   Y+ ++      G W
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    V K+M  +GV PD   +N+++  + + N     ++ F+ M    I PDT T N +
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308

Query: 482 IDCHFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           I C  K G+  +A ++F  M+E+    +P   T+  +I+L     + E+ +     M A+
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE 368

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQA 575
           GL PN+V+Y  L+  Y   G   +A                             G  ++A
Sbjct: 369 GLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKA 428

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +  F +MR +  KP+ ++ N+LI+A+G      EA  +L  M+ NG++P++V+  TL+ A
Sbjct: 429 MKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAA 488

Query: 636 LIRVDKFHKVFS 647
             R  +  K+ S
Sbjct: 489 CGRCGQKVKIKS 500



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 234/517 (45%), Gaps = 22/517 (4%)

Query: 142 SIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LT 195
           S++ +  V  W++ + N C   ++ Y+++I    R   + +A   F   Q+ R  P   T
Sbjct: 141 SLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+A  R      A+N+M  M +         Y+ +I +   +     +L   + K+
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL--NVCKK 257

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +  + +  D    N V+  + +    SK + +  + +G  + P T T   VI  L   G+
Sbjct: 258 MTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQ 317

Query: 316 TIEAEAVFEELKE--SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
             +A  +F  +KE  S   P    +  ++  Y   G +++ +   + M   G+ P+  +Y
Sbjct: 318 NGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSY 377

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI AYA+ G  + A  V  E++ +   P+   Y+ +L  Y   G+ ++  +V + M+ 
Sbjct: 378 NALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRR 437

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           +  +P+   YN +ID +G    L  A+     M   G++P+ ++  TL+    +CG+  +
Sbjct: 438 NHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVK 497

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            + +    + RG    TT YN  I        ++    L   MR + + P+ VTY  L+ 
Sbjct: 498 IKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLIS 557

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              +  ++ +A+  L+ + D  +             S    +S+I A+ +  +  EA ++
Sbjct: 558 GCCKMSKYGEALGFLDEMMDLKIPL-----------SKEVYSSVICAYSKQGQVTEAESM 606

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
              MK  G +PDV+TYT ++ A    + + K  + +L
Sbjct: 607 FTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFL 643



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/423 (21%), Positives = 196/423 (46%), Gaps = 16/423 (3%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFL 288
           N+ L+I+ +T+   ++ S+  ++++ ++  K       + N +I   A+     +A    
Sbjct: 128 NFPLLIREITQIGSLEHSV--QVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF 185

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              Q     P   TY A+I A   +G+   A  + +++  + + P    YN L+      
Sbjct: 186 FEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 245

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+A  V  +M  +GV PD  T+++++ AY    ++       + M+ ++ +P++   
Sbjct: 246 GNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTL 305

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVE--PDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           + ++      G+  +   +   MK    E  PD   +  +I  +     + +   AF+ M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L+EG++P+ +++N LI  +   G    A  +F E+++ G+ P   +Y  ++N  G+  + 
Sbjct: 366 LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKP 425

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E   ++   MR     PN+V+Y  L+D YG  G   +A+E L             M  +G
Sbjct: 426 EKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE-----------MERNG 474

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++P+ +++ +L+ A G   +  +  +VL   +  G+K +   Y + + + + V ++ K  
Sbjct: 475 VQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKAL 534

Query: 647 SSY 649
           S Y
Sbjct: 535 SLY 537



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/486 (21%), Positives = 227/486 (46%), Gaps = 22/486 (4%)

Query: 154 QKHNLCYSYELLYSILIH---ALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDD 208
           +K + CY   + ++ +IH     G+ E    AF  +L++  +   ++YNALI A A +  
Sbjct: 330 EKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGM 389

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            ++A ++ ++++++G+H D ++Y+ ++ +  ++ K + ++  K+++ +  +  + +    
Sbjct: 390 DKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAM--KVFELMRRNHCKPNLVSY 447

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  +   G  ++A+  L   +  G+ P   +   ++ A    G+ ++ ++V    + 
Sbjct: 448 NALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAEL 507

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+K  T AYN+ +  Y+ +G    A  +   M    V PD  TY++LI       ++  
Sbjct: 508 RGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGE 567

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   L EM       +  +YS ++  Y  +G+      +  +MK  G  PD   Y  MI 
Sbjct: 568 ALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIH 627

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            +        A A F  M ++ ++PD+I  ++L+    K G+  +   L E M+E+    
Sbjct: 628 AYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPF 687

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             +++  M++       W ++  L+  M     + ++     L+   G+SG+ +  ++  
Sbjct: 688 NNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLF 747

Query: 569 EGL--SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             +  S   +N +           ++ L +L+ A G  ++  E   VLQ+M+E GL+P V
Sbjct: 748 YKIVASGAEINFYTY---------SILLKNLLAA-GNWRKYIE---VLQWMEEAGLQPSV 794

Query: 627 VTYTTL 632
             Y ++
Sbjct: 795 GMYRSI 800



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 9/268 (3%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTPLT---YNALISACARNDDLEKALNLMSKMR 220
           Y++LI    +  K  EA  FL        PL+   Y+++I A ++   + +A ++ +KM+
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I +       + +    L+ E+E D ++ D    + ++  F K G 
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKA--SALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            +K +      +   +    +++  +++A S      E   + + ++ S         N 
Sbjct: 670 PAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQ 729

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G ++    +  ++  SG   + +TYS+L+     AG W     VL+ ME + 
Sbjct: 730 LLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAG 789

Query: 401 AKPNSFIYSRI--LAGYRDRGEWQRTFQ 426
            +P+  +Y  I   A  R   E+    Q
Sbjct: 790 LQPSVGMYRSISSFAQNRSGAEYAAVIQ 817


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 217/455 (47%), Gaps = 30/455 (6%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TY  LI+A  +   +E++ +L  KM  +G   D +  S ++    R  K+  + +  
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV-- 377

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L++E+    ++ +      +I    K+G   +A          G+S    T   V+  L 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLF 437

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G+T EAE VFE + +  L P    Y+ALL GY K+G ++ AE V+ +ME+  V P+  
Sbjct: 438 KVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVI 497

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S +I+ YA  G    A  VL+EM   +  PN+ +Y+ ++ GY   GE        KEM
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           KS  +E     ++++++   +   +  A +    M S+GI+PD + + +LID +FK G  
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  + +EM+E+        YN +I  L    ++ D + +   M   GL P+ +TY T+
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTI 676

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++ Y           C++G ++ A++    M++ G+ P+ +  N LI             
Sbjct: 677 INTY-----------CIKGKTEDALDILNEMKSYGIMPNAVTYNILIGG----------- 714

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
                + + G  P  +T+  L+KA  R +K  K+ 
Sbjct: 715 -----LCKTGFVPTPITHKFLVKAYSRSEKADKIL 744



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 202/451 (44%), Gaps = 48/451 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS L+    +  K+  A L+ Q+   + + P  +T++++I+  A+   L KA++++ +M 
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     + I Y+++I    +  + D +      KE++  ++E    + + ++    + G 
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVA--DDFCKEMKSRRLEESNVIFDILLNNLKRVGR 581

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +      G+ P    YA++I      G  + A ++ +E+KE  ++    AYNA
Sbjct: 582 MDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNA 641

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+KG +++G   D  +V S M   G+ PD  TY+ +I+ Y   G+ E A  +L EM+   
Sbjct: 642 LIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYG 700

Query: 401 AKPNSFIYSRILAGYRDRG------------------------------------EWQRT 424
             PN+  Y+ ++ G    G                                    E +R 
Sbjct: 701 IMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQ 760

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             VL EM   G+  D   YN +I  +   + +  A+  + +M  +GI P+  T+NTL+  
Sbjct: 761 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 820

Query: 485 HFKCG----RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
               G      +  E+L  EM ERG  P   TY+I+++  G     +    L   M  +G
Sbjct: 821 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 880

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
            +P + TY  L+  Y +SG+  +A E L  L
Sbjct: 881 FVPTLKTYNVLISDYAKSGKMIEARELLNDL 911



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/568 (21%), Positives = 245/568 (43%), Gaps = 55/568 (9%)

Query: 124 VPA-PLWHSLLKNLCSSN--SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           VP  P W++LL    +S   S + L Y+ + +       +S     ++L+H+L +   L 
Sbjct: 91  VPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSV----NVLVHSLCKVGDLD 146

Query: 181 EAFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
            A    +   +  +   TYN +I    +   +++   L+S+M + G   D I  +++++ 
Sbjct: 147 LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKG 206

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             R   +  +    +Y  ++   +  D   LN +I G+ +A   S+A   +  +    + 
Sbjct: 207 YCRIGLVQYAEWV-MYNLVD-GGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVK 264

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEEL-------------------KESGLKPRTKAY 338
               TY  ++ A   +G    AE++F E+                   +   L+P    Y
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+  Y K   ++++  +  +M  +G++PD  T S ++  +   G+   A ++ +EM  
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+ I+      G     F +  +M   G+  D      ++D   K      
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F+ +L   + P+ +T++ L+D + K G+ + AE + ++M++    P   T++ +IN
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-CLE-------- 569
              ++        +L  M  + ++PN + Y  L+D Y ++G  D A + C E        
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEE 564

Query: 570 ---------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                          G  D+A +    M + G+ P  +   SLI+ + ++     A +++
Sbjct: 565 SNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIV 624

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
           Q MKE  ++ DVV Y  L+K L+R+ K+
Sbjct: 625 QEMKEKNIRFDVVAYNALIKGLLRLGKY 652



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 216/512 (42%), Gaps = 57/512 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEK------ALNLMSKM 219
           Y+ +I++L +S ++ EAF L  +  +  ++++ +++     D L K      A  +   +
Sbjct: 394 YATIINSLFKSGRVMEAFNLQSQMVVRGISFD-IVTCTTVMDGLFKVGKTKEAEEVFETI 452

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +     + + YS ++    +  K++ +  +LQK+ KE     +  +    + +I G+AK
Sbjct: 453 LKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE----HVPPNVITFSSIINGYAK 508

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  SKA+  L       + P T  YA +I     +G    A+   +E+K   L+     
Sbjct: 509 KGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVI 568

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           ++ LL    ++G + +A  ++ +M   G+ PD   Y+ LID Y   G   +A  +++EM+
Sbjct: 569 FDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
             + + +   Y+ ++ G    G++   + V   M   G+ PD   YN +I+T+       
Sbjct: 629 EKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTE 687

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-------------RYDRAEE-------- 496
            A+   + M S GI P+ +T+N LI    K G              Y R+E+        
Sbjct: 688 DALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIH 747

Query: 497 ---------------LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
                          + +EM +RG      TYN +I         E   +    M   G+
Sbjct: 748 EKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI 807

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN+ TY TL+     +G  ++ +E  E L  +       M   GL P+    + L++ +
Sbjct: 808 APNITTYNTLLGGLSNAGLMEEMMEETEKLVSE-------MNERGLVPNAATYDILVSGY 860

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           G      +   +   M   G  P + TY  L+
Sbjct: 861 GRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 892



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 172/408 (42%), Gaps = 55/408 (13%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S+R   + + ++ L++   R   +++A +L+  M   G   D +NY+ +I    +     
Sbjct: 559 SRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQL 618

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
           ++L   + +E++   I  D    N +I G  + G          M + +GL+P   TY  
Sbjct: 619 AAL--SIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIE-LGLAPDCITYNT 675

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY--------------- 350
           +I      G+T +A  +  E+K  G+ P    YN L+ G  K G+               
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYS 735

Query: 351 ---------------------LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
                                LK  + V+ EM + G+  D  TY+ LI  Y      E A
Sbjct: 736 RSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 795

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRG----EWQRTFQVLKEMKSSGVEPDTHFYNV 445
                +M V    PN   Y+ +L G  + G      + T +++ EM   G+ P+   Y++
Sbjct: 796 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 855

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++  +G+       +     M+++G  P   T+N LI  + K G+   A EL  ++  +G
Sbjct: 856 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKG 915

Query: 506 YFPCTTTYNIM----INLLGEQE-------RWE-DVKRLLGNMRAQGL 541
             P + TY+I+    +NL  E E        +E +VK+LL  M  +GL
Sbjct: 916 RIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 963



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 163/382 (42%), Gaps = 48/382 (12%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A A F  ++  GL P    +N LL  +   G +   + + S+M   GV+PD  + ++L+ 
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           +    G  + A   L+  +V     ++  Y+ ++ G+  +G   + F +L EM   G+  
Sbjct: 138 SLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCF 195

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D+   N+++  + +   + +A      ++  G+  D I  NTLID + +     +A EL 
Sbjct: 196 DSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELI 255

Query: 499 EEMQERGYFPCTTTYNIMINLL---GEQER-----------WEDVKRLLGN-----MRAQ 539
           E            TYN ++      G+  R           W+D  RL  N        +
Sbjct: 256 ENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315

Query: 540 GLLPNVVTYTTLVDIYGQ----------------SGRFDDAIE--------CLEGLSDQA 575
            L P +VTYTTL+  Y +                +G   D +         C  G   +A
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEA 375

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              FR M   GL P++++  ++IN+  +  R  EAF +   M   G+  D+VT TT+M  
Sbjct: 376 AVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDG 435

Query: 636 LIRVDKF---HKVFSSYLFFNI 654
           L +V K     +VF + L  N+
Sbjct: 436 LFKVGKTKEAEEVFETILKLNL 457



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 138/312 (44%), Gaps = 43/312 (13%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL--TP--LTYNALIS 201
           A ++V  +++ N+ +   + Y+ LI  L R  K    ++ S+   L   P  +TYN +I+
Sbjct: 620 ALSIVQEMKEKNIRFDV-VAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIIN 678

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK---------- 251
                   E AL+++++M+  G   + + Y+++I  L +T  + + +  K          
Sbjct: 679 TYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSE 738

Query: 252 -------LYKEIECDKIELDGQLL-----------------NDVIVGFAKAGDASKAMRF 287
                  +++++    +EL  Q +                 N +I G+       KA++ 
Sbjct: 739 KADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKT 798

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSG----RTIEAEAVFEELKESGLKPRTKAYNALLK 343
                  G++P   TY  ++  LSN+G       E E +  E+ E GL P    Y+ L+ 
Sbjct: 799 YSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVS 858

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY ++G  K    +  EM   G +P   TY++LI  YA +G+   AR +L ++      P
Sbjct: 859 GYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIP 918

Query: 404 NSFIYSRILAGY 415
           NSF Y  +  G+
Sbjct: 919 NSFTYDILTCGW 930



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 33/246 (13%)

Query: 423 RTFQVLKEMKSSGVEP-DTH----FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           RTF       S  + P  TH    F+  +I  +  ++    A A F  M + G+ P    
Sbjct: 37  RTFSSQIHKDSIFIPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPF 96

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           WNTL+      G   + + ++ +M   G  P   + N++++ L    +  D+   LG +R
Sbjct: 97  WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLC---KVGDLDLALGYLR 153

Query: 538 AQGLLP-NVVTYTTLVDIYGQSGRFD----------------DAIE--------CLEGLS 572
              ++  + VTY T++  + Q G  D                D+I         C  GL 
Sbjct: 154 NNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLV 213

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
             A      +   G+    + LN+LI+ + E    ++A  +++    + +K D+VTY TL
Sbjct: 214 QYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTL 273

Query: 633 MKALIR 638
           +KA  +
Sbjct: 274 LKAFCK 279


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 13/445 (2%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           R+  L  A++L S M +       ++++ ++ ++ +  K D  ++  L K++E   I  D
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRND 119

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N VI  F      S A+  LG    +G  P   T  +++       R  +A ++ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ E G KP   AYNA++    K   + DA     E+ER G+ P+  TY+ L++   N+ 
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           RW  A  +L +M      PN   YS +L  +   G+     ++ +EM    ++PD   Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I+    ++ +  A   FD M+S+G   D +++NTLI+   K  R +   +LF EM +R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G    T TYN +I    +    +  +     M   G+ P++ TY  L+     +G  + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +   E +  + ++   V  T           ++I    +  +  EA+++   +   GLKP
Sbjct: 420 LVIFEDMQKREMDLDIVTYT-----------TVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           D+VTYTT+M  L      H+V + Y
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALY 493



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 19/438 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +N L+SA  +    +  ++L  KM   G   D   +++VI       ++    S+L K+ 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 254 K-EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           K   E D++ + G L+N    GF +    S A+  +     +G  P    Y A+I +L  
Sbjct: 148 KLGYEPDRVTI-GSLVN----GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           + R  +A   F+E++  G++P    Y AL+ G        DA  ++S+M +  + P+  T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           YS L+DA+   G+   A+ + +EM      P+   YS ++ G           Q+   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G   D   YN +I+ F K   +   M  F  M   G+  +T+T+NTLI   F+ G  D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A+E F +M   G  P   TYNI++  L +    E    +  +M+ + +  ++VTYTT++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               ++G+ ++A      LS             GLKP  +   ++++         E  A
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS-----------LKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 613 VLQYMKENGLKPDVVTYT 630
           +   MK+ GL  +  T +
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 12/392 (3%)

Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C+      S+ +  LG+  KL YE            +T  +L++   R + +  A++L+ 
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM + GY  D + Y+ +I SL +T +++ +     +KEIE   I  +      ++ G   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF--DFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +   S A R L       ++P   TY+A++ A   +G+ +EA+ +FEE+    + P    
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y++L+ G      + +A  +   M   G L D  +Y+ LI+ +  A R E    + +EM 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 N+  Y+ ++ G+   G+  +  +   +M   G+ PD   YN+++        L 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  F+ M    ++ D +T+ T+I    K G+ + A  LF  +  +G  P   TY  M+
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + L  +    +V+ L   M+ +GL+ N  T +
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 213/463 (46%), Gaps = 26/463 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N +I    +  DL +A  L+++M+  G   D + Y+ +I    +  +++   ++KL  
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE--VEKLVG 253

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+       D    N ++  F K G   +A  +    +  G+     T++  + A   +G
Sbjct: 254 EMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNG 313

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  +F +++  G+KP    Y  L+ G  K G L DA  + +EM + GV  +  TY+
Sbjct: 314 MVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYT 373

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D     G+   A  V + ME +  + N  +Y+ ++ G+      +R   +L EMK  
Sbjct: 374 VLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDK 433

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E D   Y  +I        L  A +  ++M   G++P+ + +  ++D  FK  +   A
Sbjct: 434 GMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEA 493

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L ++M + G+ P   TY  +++ L +    ++       M   GL PNV  YT LVD 
Sbjct: 494 IALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDG 553

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRT---DG-LKPSNL----ALNS-LINA----- 600
             ++GR D A+  L+ + D+ ++   V+ T   DG LK  NL    AL + +IN+     
Sbjct: 554 LCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLD 613

Query: 601 ----------FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                     F       EA  VL  M ENG+ PD V Y  L+
Sbjct: 614 LYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 212/490 (43%), Gaps = 30/490 (6%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           A  L  R+   P   + L+S  A    L+ A+  ++++R+     +    + ++  L R 
Sbjct: 117 ALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARE 176

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
               S L  +L++++    +       N +I    K GD ++A   L   + +G SP   
Sbjct: 177 RS--SELAWRLFEQLPAPNV----FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVV 230

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY ++I      G   E E +  E++  G +P    YNAL+  + K G ++ A    +EM
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM 290

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +R GV+ +  T+S  +DA+   G    A  +  +M +   KPN   Y+ ++ G    G  
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +  EM   GV  +   Y V++D   K   +  A   F  M   GI  + + + TL
Sbjct: 351 DDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTL 410

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I  HF     +RA  L  EM+++G     + Y  +I  L   ++ ++ K LL  M   GL
Sbjct: 411 IHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL 470

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVN 577
            PN V YT ++D   ++ +  +AI                         C  G  D+A++
Sbjct: 471 KPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M   GL+P+  A  +L++   ++ R  +A  +L  M + G+  D V  T+LM   +
Sbjct: 531 HFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHL 590

Query: 638 RVDKFHKVFS 647
           +       F+
Sbjct: 591 KQGNLQDAFA 600



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 11/353 (3%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   T+  +I  L   G   EA A+   +K  G  P    YN+L+ GY K G L++ E 
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEK 250

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +V EM   G  PD  TY+ L++ +   GR E A     EM+      N   +S  +  + 
Sbjct: 251 LVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFC 310

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G  +   ++  +M+  G++P+   Y  ++D   K   L  A+   + M+ +G+  + +
Sbjct: 311 KNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVV 370

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+  L+D   K G+   AE++F  M+  G       Y  +I+     +  E    LL  M
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           + +G+  +V  Y  L  I+G           L+ L D+A +    M   GLKP+N+   +
Sbjct: 431 KDKGMELDVSLYGAL--IWGLCN--------LQKL-DEAKSLLNKMDECGLKPNNVIYTN 479

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +++A  + ++++EA A+LQ M ++G +P++VTY  L+  L +     +  S +
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHF 532



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 160/375 (42%), Gaps = 38/375 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           +S  + A  ++  + EA  L  + R+  +     TY  L+    +   L+ AL L ++M 
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS-----LLQK------------------------ 251
           Q G   + + Y++++  L +  K+  +     L+++                        
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421

Query: 252 ----LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
               L  E++   +ELD  L   +I G        +A   L      GL P    Y  ++
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            A   + +  EA A+ +++ +SG +P    Y AL+ G  K G + +A    ++M   G+ 
Sbjct: 482 DACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLE 541

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+   Y+ L+D     GR + A ++L EM       ++ + + ++ G+  +G  Q  F +
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFAL 601

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             +M +SG++ D + Y   +  F   N +  A      M+  GI PD + +N LI+   K
Sbjct: 602 KAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQK 661

Query: 488 CGRYDRAEELFEEMQ 502
            G  + A  L  EM+
Sbjct: 662 LGNMEEAAILQNEME 676


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 238/551 (43%), Gaps = 45/551 (8%)

Query: 117 LAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           L+E +  V  P +   L  LCS +  +D A  + S ++K     S   +  +L   +   
Sbjct: 77  LSELHAHVSKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSR 136

Query: 177 --EKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
             EK    F  ++    R   + Y   + A     DL+K   LM  M +DG       Y+
Sbjct: 137 HFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYN 196

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           LV+  L +  +I  +  +KL+ E+    +  +    N +I G+ K G   +A+ F    +
Sbjct: 197 LVLGGLCKVRRIKDA--RKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMK 254

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP------------------- 333
              +     TY +++  L  SGR  +A  V  E++ SG  P                   
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDG 314

Query: 334 ---------RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
                      + Y  LL G  ++G ++ AE V++++  +GV P + +Y++L++AY   G
Sbjct: 315 LFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             + A +  ++ME    +PN   ++ +++ + + GE       ++ M   GV P    YN
Sbjct: 375 DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYN 434

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I+ +G+           D M   GI+P+ I++ +LI+C  K  +   AE +  +M  R
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P    YN++I       + +D  R    M   G+   +VTY TL++  G++GR    
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRV--- 551

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    +A + F  M   G  P  +  NSLI+ + +     +   +   MK  G+KP
Sbjct: 552 --------KKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603

Query: 625 DVVTYTTLMKA 635
            V T+  L+ A
Sbjct: 604 TVGTFHPLIYA 614



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 222/512 (43%), Gaps = 51/512 (9%)

Query: 160 YSYELLYSIL--IHALGRSEKLYEAFLLSQRQRL-TPLTYNALISACARNDDLEKALNLM 216
           ++Y L+   L  +  +  + KL++  +  QR  +   +TYN LI    +   +E+AL   
Sbjct: 193 FAYNLVLGGLCKVRRIKDARKLFDEMI--QRNMVPNTVTYNTLIDGYCKVGGIEEALGFK 250

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            +M++    C+ + Y+ ++  L  + ++D +      +E+    +E++G        GF 
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDA------REV---LLEMEGS-------GFL 294

Query: 277 KAG-------DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
             G       D S      G+  G  +     TY  ++  L   GR  +AE V  +L E+
Sbjct: 295 PGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN 354

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P   +YN L+  Y + G +K A     +ME  G+ P+  T++ +I  +   G  + A
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
              ++ M      P    Y+ ++ GY  +G + R F+ L EM  +G++P+   Y  +I+ 
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   L  A      M+  G+ P+   +N LI+      +   A   F+EM + G    
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +IN LG   R +  + L   M  +G  P+V+TY +L+  Y +S      +E  +
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYD 594

Query: 570 GLSDQAVNA-----------------------FRVMRTDGLKPSNLALNSLINAFGEDQR 606
            +    +                         F+ M    L P     N +I ++ ED  
Sbjct: 595 KMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGN 654

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +A ++ Q M + G+  D VTY +L+ A +R
Sbjct: 655 VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLR 686



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 195/443 (44%), Gaps = 45/443 (10%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E  Y IL++ L   GR EK  E         +TP  ++YN L++A  +  D++KA+    
Sbjct: 325 ERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTE 384

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M + G   + I ++ VI     T ++D   + ++++ ++     +E    L+N    G+
Sbjct: 385 QMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN----GY 440

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            + G   +   FL      G+ P   +Y ++I  L    + I+AE V  ++   G+ P  
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + YN L++    +  LKDA     EM +SG+     TY+ LI+     GR + A  +  +
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQ 560

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP----------------- 438
           M      P+   Y+ +++GY      Q+  ++  +MK  G++P                 
Sbjct: 561 MAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGV 620

Query: 439 -----------------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                            D   YN MI ++ +   +  AM+   +M+ +G++ D +T+N+L
Sbjct: 621 VTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSL 680

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I  + +  R    + L ++M+ +G  P   TYNI+I  L + + +         M  +GL
Sbjct: 681 ILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGL 740

Query: 542 LPNVVTYTTLVDIYGQSGRFDDA 564
           L NV     L+    + G   +A
Sbjct: 741 LLNVSMCYQLISGLREEGMLREA 763



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 146/313 (46%), Gaps = 10/313 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           + SL+  LC     ID A  V++ +    +  + E+ Y++LI A     KL +AF     
Sbjct: 468 YGSLINCLCKDRKLID-AEIVLADMIGRGVSPNAEI-YNMLIEASCSLSKLKDAFRFFDE 525

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++      T +TYN LI+   RN  ++KA +L  +M   G + D I Y+ +I    ++  
Sbjct: 526 MIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKS-- 583

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +++    +LY +++   I+      + +I    K G  +    F  M Q + L P    Y
Sbjct: 584 VNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQ-MDLVPDQFVY 642

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I + +  G  ++A ++ +++ + G+      YN+L+  Y++   + + + +V +M+ 
Sbjct: 643 NEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKA 702

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++P   TY++LI    +   +  A    +EM       N  +  ++++G R+ G  + 
Sbjct: 703 KGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLRE 762

Query: 424 TFQVLKEMKSSGV 436
              V  E+   G+
Sbjct: 763 AQIVSSELSIGGL 775


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 211/446 (47%), Gaps = 18/446 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  LI    +   L++A+ L+  M+  G +   + +++VI  L R  ++  +L   +Y+
Sbjct: 82  TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHAL--GVYR 139

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  D    D      ++ G +KAG    A++ L         P   T   V+ +L    
Sbjct: 140 QMN-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD 198

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTY 373
           R  +A  + EE+   G+      Y+AL+ G  K   L +A   ++ E+ R G  PD  TY
Sbjct: 199 RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTY 258

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +ID    AGR   A  + +EM  +   P +  Y+ ++ GY   G+     ++L +M  
Sbjct: 259 STVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
               PD   Y  ++  F K   L  A   F +M++  + PD +T+ +L+D     GR + 
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A EL EE+  RG  P   TYN +++   +  +    + L+ + R++G +PN VTY  LV 
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI-NAFGEDQRDAEAFA 612
              ++GR D A++ L+ L+ +           G  P+++A+ ++I +A   D R  +A  
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEG----------GPCPTSVAMYAIILDALCRDGRTDDAVQ 485

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
             + M + G  P   T+ T++ AL +
Sbjct: 486 FYEEMIQRGYVPAAATFATVVFALCK 511



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 215/493 (43%), Gaps = 50/493 (10%)

Query: 116 KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           K+AE   AV    +++L+  LC +   +D A  ++  ++   +     LL++++I  L R
Sbjct: 71  KMAE-LGAVNHTTYYNLIHPLCKARL-LDEAMGLLLDMKSRGM-NPGTLLHNVVIGGLCR 127

Query: 176 SEKLYEAF-LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           + +L  A  +  Q     P   LTY  L+   ++   L  A+ ++ +M    +  D    
Sbjct: 128 AGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTL 187

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GM 290
           ++V+QSL   +++D +  ++L +E+    +  +    + ++ G  K     +A+  L G 
Sbjct: 188 TVVVQSLCLGDRVDDA--RELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G +P   TY+ VI  L  +GR  +A  +FEE+      P    YN+L+ GY + G 
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGD 302

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A  ++ +M      PD  TY+ L+ A+   GR + A  + ++M  +   P+   ++ 
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G    G  +   ++L+E+   G  P  + YN ++D + K N +  A        S G
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422

Query: 471 IEPDTITWNTLI-------------------------------------DCHFKCGRYDR 493
             P+T+T+N L+                                     D   + GR D 
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A + +EEM +RGY P   T+  ++  L +  + +    LL  M   G  P   T   +V 
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542

Query: 554 IYGQSGRFDDAIE 566
            Y ++G    A E
Sbjct: 543 AYCRAGMIQKADE 555



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 192/429 (44%), Gaps = 22/429 (5%)

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   GY  D   +++V++ L  + K+   L   L  EI    +  D   LN ++     A
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKL-RHLGPLLLDEIRDRGLSPDPVELNTILAELCDA 59

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D + AM        +G    T TY  +I  L  +    EA  +  ++K  G+ P T  +
Sbjct: 60  RDTTTAMALFDKMAELGAVNHT-TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLH 118

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G  + G L+ A  V  +M  +   PD  TY+ L+   + AGR   A  VL+EM  
Sbjct: 119 NVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVS 177

Query: 399 SHAKPNSFIYSRILAGY--RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +   P++   + ++      DR +  R  ++++EM   G+  +   Y+ ++D   K   L
Sbjct: 178 ARHVPDNTTLTVVVQSLCLGDRVDDAR--ELVEEMLHRGMAANAITYSALVDGLCKCERL 235

Query: 457 HHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
             A+A     +   G  PD +T++T+ID   K GR   A ++FEEM      P   TYN 
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNS 292

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I         ++  RLLG M      P+V+TYTTL+  + + GR DDA E         
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE--------- 343

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F+ M  + L P  +   SL++    + R  +A  +L+ +   G  P + TY  ++  
Sbjct: 344 --LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 401

Query: 636 LIRVDKFHK 644
             + ++  K
Sbjct: 402 YCKSNQVRK 410



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 165/375 (44%), Gaps = 57/375 (15%)

Query: 281 ASKAMRFLGM-----AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
           AS  +R LG       +  GLSP       ++  L ++  T  A A+F+++ E G    T
Sbjct: 22  ASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHT 81

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+    K   L +A  ++ +M+  G+ P    ++++I     AGR   A  V ++
Sbjct: 82  TYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQ 140

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M  +H  P+   Y++++ G    G  +   QVL+EM S+   PD     V++ +     C
Sbjct: 141 MNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL----C 195

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L                                 R D A EL EEM  RG      TY+ 
Sbjct: 196 LGD-------------------------------RVDDARELVEEMLHRGMAANAITYSA 224

Query: 516 MINLLGEQERW-EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           +++ L + ER  E V  LLG +  +G  P++VTY+T++D   ++GR  DA++  E +S  
Sbjct: 225 LVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-- 282

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                         P+ +  NSLI  +       EA  +L  M ++   PDV+TYTTLM 
Sbjct: 283 ------------CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330

Query: 635 ALIRVDKFHKVFSSY 649
           A  ++ +    +  +
Sbjct: 331 AFCKMGRLDDAYELF 345



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 11/284 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           ++SL+   C +   +D A  ++  +   N C    + Y+ L+ A   +GR +  YE F  
Sbjct: 290 YNSLIGGYCRAGD-MDEAIRLLGKMVDDN-CAPDVITYTTLMSAFCKMGRLDDAYELFQQ 347

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
               +L+P  +T+ +L+        +E AL L+ ++ + G       Y+ V+    ++N+
Sbjct: 348 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM--AQGVGLSPKTA 301
           +  +  ++L  +        +    N ++ G  +AG   +A+++L    ++G       A
Sbjct: 408 VRKA--EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVA 465

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            YA ++ AL   GRT +A   +EE+ + G  P    +  ++    K    + A  ++ EM
Sbjct: 466 MYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            + G  P   T   ++ AY  AG  + A  +  E+ +   K +S
Sbjct: 526 IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKSSS 569



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 17/226 (7%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L E++  G+ PD    N ++           AMA FD+M   G    T  +N LI    
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLC 91

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA--QGLLPN 544
           K    D A  L  +M+ RG  P T  +N++I  L    R   ++  LG  R       P+
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGR---LRHALGVYRQMNDAHPPD 148

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            +TYT LV    ++GR  DA++ L+    + V+A  V       P N  L  ++ +    
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQ----EMVSARHV-------PDNTTLTVVVQSLCLG 197

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            R  +A  +++ M   G+  + +TY+ L+  L + ++  +  +  L
Sbjct: 198 DRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLL 243


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 13/446 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N +I    +  +L +A  L  +M+  G   D + Y+ +I    +  +++   ++ L  
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEE--VELLVS 258

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+       D    N +I  F+K G   KA  + G  + +G+     T +  + A    G
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  +F +++  G+ P    Y +L+ G  K G L DA  ++ EM   G++P+  TY+
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 378

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +++D     G+   A  VL  ME +  K N  +Y+ ++ G+      +R   +L EMK+ 
Sbjct: 379 VMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E D   Y  +I    K   L  A +   +M   G+ P+T+ + T++D  FK G+   A
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L  ++ + G  P   TY  +I+ L +     +       MR  GL PNV  YTTL+D 
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + + G    A+  +  + D+ ++  +V+ T           SLI+   +      AFA+ 
Sbjct: 559 FCKIGSLSKAVHLMNEMVDKGMSLDKVVYT-----------SLIDGHMKQGDLQGAFALK 607

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVD 640
             M E GL+ D+  YT  +     ++
Sbjct: 608 AKMIETGLQLDLYCYTCFISGFCNMN 633



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 210/463 (45%), Gaps = 17/463 (3%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           A  L   +   P  ++ L+S  A +  L+ A+  ++++RQ     +    + ++  L R 
Sbjct: 122 ALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN 181

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +    L+++L++ +    +       N VI    K G+  +A       + +G SP   
Sbjct: 182 RQ--GGLVRRLFEHLPAPNV----FTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVV 235

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY ++I      G   E E +  E+++SG       YNAL+  + K G+++ A     EM
Sbjct: 236 TYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM 295

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +R GV+ +  T S  +DA+   G    A  +  +M V    PN F Y+ ++ G    G  
Sbjct: 296 KRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 355

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +L EM   G+ P+   Y VM+D   K   +  A      M   G++ + + + TL
Sbjct: 356 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTL 415

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I  HF     +RA +L  EM+ +G     + Y  +I  L + ++ ++ K LL  M   GL
Sbjct: 416 IHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGL 475

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN V YTT++D + ++G+  +A+  L  + D            GL+P+ +   +LI+  
Sbjct: 476 RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDS-----------GLQPNVVTYCALIDGL 524

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +     EA +    M+E GL P+V  YTTL+    ++    K
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSK 567



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 179/399 (44%), Gaps = 28/399 (7%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
            A  G    A+R L   + + + P T T   ++  L+ + +      +FE L      P 
Sbjct: 143 LADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP----APN 198

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              +N ++    K G L +A  +   M+  G  PD  TY+ LID Y   G  E   +++ 
Sbjct: 199 VFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVS 258

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM  S    +   Y+ ++  +   G  ++ +    EMK  GV  +    +  +D F K  
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  AM  F +M   G+ P+  T+ +L+D   K GR D A  L +EM  +G  P   TY 
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 378

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----- 569
           +M++ L ++ +      +L  M   G+  N + YTTL+  +  +   + A++ L      
Sbjct: 379 VMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438

Query: 570 --------------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                         GL      D+A +    M   GL+P+ +   ++++AF +  +++EA
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            A+L  + ++GL+P+VVTY  L+  L +    ++  S +
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 206/476 (43%), Gaps = 53/476 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+I  L +  +L EA  L  R +    +P  +TYN+LI    +  +LE+   L+S+MR
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D + Y+ +I   ++   I+ +     + E++   +  +   L+  +  F K G 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKA--YSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM+     +  G+ P   TY +++     +GR  +A  + +E+   GL P    Y  
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY----------------ANAG 384
           ++ G  K G +  A+ V+S MER+GV  +E  Y+ LI  +                 N G
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439

Query: 385 -------------------RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
                              + + A+ +L +M+    +PN+ IY+ I+  +   G+     
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L ++  SG++P+   Y  +ID   K   ++ A++ FD+M   G++P+   + TLID  
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G   +A  L  EM ++G       Y  +I+   +Q   +    L   M   GL  ++
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             YT  +  +           C   +  +A      M   G+ P   A N LI  +
Sbjct: 620 YCYTCFISGF-----------CNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKY 664



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 7/345 (2%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E  Y+ L+    ++ +L +A +L      Q L P  +TY  ++    +   +  A +++S
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLS 398

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y+ +I         + +L   L  E++   +ELD  L   +I G  K
Sbjct: 399 LMERAGVKANELLYTTLIHGHFMNKNSERAL--DLLNEMKNKGMELDVSLYGTLIWGLCK 456

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A   L      GL P T  Y  ++ A   +G+  EA A+  ++ +SGL+P    
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVT 516

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+ G  K G + +A     +M   G+ P+   Y+ LID +   G    A  ++ EM 
Sbjct: 517 YCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMV 576

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 +  +Y+ ++ G+  +G+ Q  F +  +M  +G++ D + Y   I  F   N + 
Sbjct: 577 DKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQ 636

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            A      M+  GI PD   +N LI  + K G  + A  L  EM+
Sbjct: 637 EARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/487 (21%), Positives = 201/487 (41%), Gaps = 47/487 (9%)

Query: 121 YRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE 177
           +  +PAP    ++ ++  LC     ++ A A+   ++    C    + Y+ LI   G+  
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVE-ARALFVRMKAMG-CSPDVVTYNSLIDGYGKCG 248

Query: 178 KLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           +L E  LL    R +      +TYNALI+  ++   +EKA +   +M++ G   + +  S
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
             + +  +   +  ++  KL+ ++    +  +      ++ G  KAG    A+  L    
Sbjct: 309 TFVDAFCKEGLVREAM--KLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 366

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVF----------------------------- 323
             GL P   TY  ++  L   G+   A+ V                              
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426

Query: 324 ------EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
                  E+K  G++     Y  L+ G  K+  L +A+ ++ +M+  G+ P+   Y+ ++
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           DA+  AG+   A  +L ++  S  +PN   Y  ++ G    G          +M+  G++
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y  +ID F K   L  A+   + M+ +G+  D + + +LID H K G    A  L
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M E G       Y   I+        ++ + +L  M   G+ P+   Y  L+  Y +
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQK 666

Query: 558 SGRFDDA 564
            G  ++A
Sbjct: 667 LGNMEEA 673



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 14/320 (4%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++++  L +  K+  A  +LS  +R       L Y  LI     N + E+AL+L+++M+
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   D   Y  +I  L +  K+D   SLL K+    +C  +  +  +   ++  F KA
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMD---DCG-LRPNTVIYTTIMDAFFKA 492

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S+A+  L      GL P   TY A+I  L  +G   EA + F++++E GL P  + Y
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+ G+ K+G L  A  +++EM   G+  D+  Y+ LID +   G  + A  +  +M  
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +  + + + Y+  ++G+ +    Q    VL EM  +G+ PD   YN +I  + K   +  
Sbjct: 613 TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEE 672

Query: 459 AMAAFDRM---LSEGIEPDT 475
           A +  + M   LS   E DT
Sbjct: 673 ASSLQNEMESVLSSCTEEDT 692


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 231/491 (47%), Gaps = 22/491 (4%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           +D A  +   L + N C      Y+IL+ AL  + ++ +A  L       P  +TY  ++
Sbjct: 238 LDEAVQLFQELPEKNTCS-----YNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMV 292

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
                  +LE A+ L+S+M   G   + + Y+ VI  L    ++  ++  ++ +++    
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV--RVVEDMVMHG 350

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           + LD  +   V+ GF + GD + A  +    Q  GL+    TY A+I  L  +G   EAE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            V +E+++ GL      Y  L+ GY K+G + +A  V ++M +  V P+  TY+ L D  
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G   +A  +L EM     + N F Y+ ++ G    G  ++  + + +M  +G++PD 
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + Y  +I    +   L  A +    ML +GI+P  +T+N L++     GR +  + L E 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M E+   P TTTYN ++     ++  +    +   M +Q ++PN  TY  L+  + ++  
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
             +A   L   S+     FR+  +        + N+LI    + ++  EA  + + M+++
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTAS--------SYNALIRLLNKKKKFTEARRLFEKMRKD 699

Query: 621 GL--KPDVVTY 629
            L  +PDV  +
Sbjct: 700 RLTAEPDVYNF 710



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 198/448 (44%), Gaps = 16/448 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+ A      ++ A  L  +M       D + Y +++      +++++++  KL  
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAI--KLLS 309

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +EL+      VI      G  S A+R +      G+    A +  V++     G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A   F+E+++ GL      Y AL+ G  + G LK+AE V+ EME  G+  D  TY+
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID Y   G+   A +V  +M      PN   Y+ +  G   +G+     ++L EM S 
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E +   YN +I+   K   L  AM     M   G++PD  T+ T+I    +    DRA
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM ++G  P   TYN+++N      R E  KRLL  M  + + PN  TY +L+  
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y           C+E         ++ M +  + P+    N LI    + +   EA    
Sbjct: 610 Y-----------CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
             M E G +    +Y  L++ L +  KF
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKF 686



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 175/382 (45%), Gaps = 6/382 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +  ++S   R  DL  A N   +M++ G   D + Y+ +I  L R  ++  +  +++ +
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA--ERVLQ 414

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+E   +++D      +I G+ K G  ++A           ++P   TY A+   L   G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  E+   GL+     YN+L+ G  K G L+ A   + +M+ +G+ PD +TY+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I A   +   + A  +L+EM     KP    Y+ ++ G+   G  +   ++L+ M   
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P+T  YN ++  +     +      +  MLS+ + P+  T+N LI  H K      A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
                EM E+G+    ++YN +I LL +++++ + +RL   MR   L      Y   +D+
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDL 714

Query: 555 YGQSGRFDDAIECLEGLSDQAV 576
                  +D +E    L D+ V
Sbjct: 715 SFN----EDNLESTLALCDELV 732



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 25/359 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+SP   +  AV+  L       EA  +F+EL E      T +YN LLK     G +KDA
Sbjct: 221 GISPSPESCNAVLCRLPLD----EAVQLFQELPEKN----TCSYNILLKALCTAGRIKDA 272

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM      PD  TY +++  Y      E+A  +L EM     + N   Y+ ++A 
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             D G+     +V+++M   GV  D   +  ++  F +   L  A   FD M   G+  D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  LI+   + G    AE + +EM+++G      TY ++I+   +  +  +   +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + PNVVTYT L D   + G    A E L             M + GL+ +    
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE-----------MCSKGLELNIFTY 498

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           NSLIN   +     +A   +  M E GLKPDV TYTT++ AL +   +D+ H +    L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 163/386 (42%), Gaps = 15/386 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSW---LQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A ++ +++   C      DLA A  +W   +QK  L  +  + Y+ LI+ L R+ +L EA
Sbjct: 355 AAVFTTVMSGFCRKG---DLA-AARNWFDEMQKRGLA-ADGVTYTALINGLCRAGELKEA 409

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             + Q        +  +TY  LI    +   + +A  + +KM Q     + + Y+ +   
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L +   + ++   +L  E+    +EL+    N +I G  KAG+  +AMR +      GL 
Sbjct: 470 LCKQGDVCAA--NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I AL  S     A ++ +E+ + G+KP    YN L+ G+   G ++  + +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  M    + P+  TY+ L+  Y      +S   + K M      PN   Y+ ++ G+  
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
               +       EM   G       YN +I    K      A   F++M  + +  +   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV 707

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQE 503
           +N  ID  F     +    L +E+ E
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELVE 733


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 228/515 (44%), Gaps = 20/515 (3%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP     S L +      +ID AY +V  L +     +   +Y+ LI+AL + E L +A 
Sbjct: 320 VPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNL-FVYNALINALCKGEDLDKAE 378

Query: 184 LL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           LL     S    L  +TY+ LI +  +   L+ A +   +M +DG       Y+ +I   
Sbjct: 379 LLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGH 438

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +    D S  + LY ++  + +E        +I G+ K     KA +         ++P
Sbjct: 439 CKFG--DLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAP 496

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T+ A+I  L ++    EA  +F+E+ E  +KP    YN +++GY K   +  A  ++
Sbjct: 497 SVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELL 556

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M  +G++PD +TY  LI    + GR  +A+  + ++   + K N   YS +L GY  +
Sbjct: 557 EDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQ 616

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G          EM   G+  D   + V+ID   K   +        +M  +G+ PD++ +
Sbjct: 617 GRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIY 676

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            ++ID + K G + ++ E  + M     FP   TY   +N L +    +    L   M  
Sbjct: 677 TSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLT 736

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
             + PN VTY   +D   + G   +A +    L  + +         GL  +    N LI
Sbjct: 737 ANISPNSVTYGCFLDSLTKEGNMKEATD----LHHEMLK--------GLLANTATYNILI 784

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             F +  R  EA  VL  M ENG+ PD +TY+T++
Sbjct: 785 RGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 210/496 (42%), Gaps = 29/496 (5%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S R  L+ +TYN LI    +   + +AL +   +R+ G   D + Y  ++    R  + D
Sbjct: 246 SNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFD 305

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             +   + + +E   +  +  + + ++ G  K G+   A   +      G  P    Y A
Sbjct: 306 DGICL-MNEMVELGFVPTEAAV-SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNA 363

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I AL       +AE +++ +    L      Y+ L+  + K G L  AE     M   G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +    + Y+ LI+ +   G   +A  +  +M     +P +  ++ +++GY    + ++ F
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++ +EM    + P  + +  +I      N +  A   FD M+   I+P  +T+N +I+ +
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K    D+A EL E+M   G  P T TY  +I+ L    R    K  + ++  + L  N 
Sbjct: 544 CKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNE 603

Query: 546 VTYTTLVDIYGQSGRFDDAIE---------------CLEGLSDQAVNA---------FRV 581
           + Y+ L+  Y   GR  +A+                C   L D A+            + 
Sbjct: 604 MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKK 663

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV-- 639
           M   GL+P ++   S+I+A+ ++    ++   L  M      P+VVTYT  M  L +V  
Sbjct: 664 MYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723

Query: 640 -DKFHKVFSSYLFFNI 654
            D+   +F   L  NI
Sbjct: 724 IDRAGHLFEKMLTANI 739



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 134/580 (23%), Positives = 229/580 (39%), Gaps = 69/580 (11%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLC-YSYELLYSILIHALGRSEKLYEAFL---L 185
           +SLL  L    S  D  +    +L+ H  C +S  L +  L+H+  ++ ++++A +   L
Sbjct: 116 NSLLHTLLLRGS--DPKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRL 173

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L P   T +A+++   R         +  +    G   D    S VI+SL     
Sbjct: 174 MLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKD 233

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  + L+  +E ++ +L     N +I G  K G   +A+      +  GL     TY
Sbjct: 234 FCRAKEKILW--MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTY 291

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++       +  +   +  E+ E G  P   A + L+ G  K G +  A  +V ++ R
Sbjct: 292 CTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGR 351

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G LP+   Y+ LI+A       + A ++ K M   +   N   YS ++  +  RG    
Sbjct: 352 FGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDV 411

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                  M   G+    + YN +I+   K+  L  A   + +M++EG+EP   T+ TLI 
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLIS 471

Query: 484 CHFK---------------------------------CGRYDRAE--ELFEEMQERGYFP 508
            + K                                 C   + AE  +LF+EM ER   P
Sbjct: 472 GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKP 531

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
              TYN+MI    +    +    LL +M   GL+P+  TY  L+     +GR   A +  
Sbjct: 532 TEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591

Query: 567 ----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
                                 C +G   +A++A   M   G+    +    LI+   + 
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ 651

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           Q     F +L+ M + GL+PD V YT+++ A  +   F K
Sbjct: 652 QDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKK 691



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 182/468 (38%), Gaps = 73/468 (15%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  T+  LIS   ++  +EKA  L  +M +         ++ +I  L  TN++  +   K
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA--SK 519

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L+ E+   KI+      N +I G+ KA +  KA   L      GL P T TY  +I+ L 
Sbjct: 520 LFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLC 579

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV----- 366
           ++GR   A+   ++L +  LK     Y+ALL GY   G L +A     EM + G+     
Sbjct: 580 STGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLV 639

Query: 367 ------------------------------LPDEHTYSLLIDAYANAGRWESARIVLKEM 396
                                          PD   Y+ +IDAY+  G ++ +   L  M
Sbjct: 640 CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLM 699

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD----------------- 439
                 PN   Y+  + G    GE  R   + ++M ++ + P+                 
Sbjct: 700 VTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM 759

Query: 440 -----------------THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
                            T  YN++I  F K   L  A      M   GI PD IT++T+I
Sbjct: 760 KEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             H + G    A EL++ M  +G  P +  +N++I         +    L  +M ++GL 
Sbjct: 820 YEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLK 879

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           P  +      D+      F     C+ G  D A+  +  M T  +K S
Sbjct: 880 PRQILQLQKRDL--GVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLS 925



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 166/390 (42%), Gaps = 35/390 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           +  L+  LCS+   +  A   +  L K NL  + E+ YS L+H      +L EA      
Sbjct: 571 YRPLISGLCST-GRVSAAKDFIDDLHKKNLKLN-EMCYSALLHGYCGQGRLTEALSASCE 628

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ +   +  + +  LI    +  D+++   L+ KM   G   D + Y+ +I + ++   
Sbjct: 629 MIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGS 688

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLS 297
                     K  EC  + +  +   +V+       G  K G+  +A           +S
Sbjct: 689 FK--------KSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANIS 740

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P + TY   + +L+  G   EA  +  E+ + GL   T  YN L++G+ K+G L +A  V
Sbjct: 741 PNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKV 799

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +SEM  +G+ PD  TYS +I  +  +G   +A  +   M     +P+S  ++ ++ G   
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCV 859

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH----------AMAAFDRML 467
            G   + F++  +M S G++P      +     G  N L H          A+  +  ML
Sbjct: 860 NGALDKAFELRNDMLSRGLKP-RQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSML 918

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           +  ++     W  L    +  G   ++EEL
Sbjct: 919 TRAVKLSLEMWKCLYLLSY--GVISKSEEL 946


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 222/495 (44%), Gaps = 79/495 (15%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNA+IS   + + +E A  ++++M+  G+  D + Y+++I SL    K+  +L       
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL------- 192

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
               K+ LD  LL++ +                         P   TY  +I A    G 
Sbjct: 193 ----KV-LDQLLLDNCM-------------------------PTVITYTILIEATIVEGG 222

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + EE+   GL P    YNA+++G  K G ++ A  +++ +   G  PD  +Y++
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+ A+ N G+W+    ++ EM     +PN   YS +++     G       VLK M    
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PDT+ Y+ +I    K   L  A+   D M+S G  PD + +NT++    K G  ++A 
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWE--DVKRLLG---NMRAQGLLPNVVTYTT 550
           E+F +++  G  P  ++YN MI+ L     W   D  R LG    M ++G+ P+ +TY +
Sbjct: 403 EIFNKLRGMGCPPNVSSYNTMISAL-----WSCGDRSRALGMVPAMISKGVDPDEITYNS 457

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+              C +GL ++A+     M   G +P+ ++ N ++    + +R  +A
Sbjct: 458 LISCL-----------CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKAL---------------------IRVDKFHKVFSSY 649
             +   M E G +P+  TY  L++ +                     I  D F ++  ++
Sbjct: 507 IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTF 566

Query: 650 LFFNIYKMLSYSGEK 664
              ++YK LS S  K
Sbjct: 567 PMLDVYKELSNSETK 581



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 12/272 (4%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++    AG++  +   L+ +      P+  + ++++ G+ +    ++  +V+ E+  S 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
            EPD   YN +I  F K N +  A    +RM + G  PD +T+N +I       +   A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++ +++      P   TY I+I     +    +  +LL  M A+GLLP++ TY  +  I 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAI--IR 250

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G          C EG+ ++A      + + G KP  ++ N L+ AF    +  E   ++ 
Sbjct: 251 GM---------CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVA 301

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            M   G +P+ VTY+ L+ +L R  +  +  S
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 206/445 (46%), Gaps = 13/445 (2%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           R+  L  A++L S M +       ++++ ++ ++ +  K D  ++  L K++E   I  D
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRND 119

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N VI  F      S A+  LG    +G  P   T  +++       R  +A ++ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ E G KP   AYNA++    K   + DA     E+ER G+ P+  TY+ L++   N+ 
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           RW  A  +L +M      PN   YS +L  +   G+     ++ +EM    ++PD   Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +++    ++ +  A   FD M+S+G   D +++NTLI+   K  R +   +LF EM +R
Sbjct: 300 SLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G    T TYN +I    +    +  +     M   G+ P++ TY  L+     +G  + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +   E +  + ++   V  T           ++I    +  +  EA+++   +   GLKP
Sbjct: 420 LVIFEDMQKREMDLDIVTYT-----------TVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
           D+VTYTT+M  L      H+V + Y
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALY 493



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 19/438 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +N L+SA  +    +  ++L  KM   G   D   +++VI       ++    S+L K+ 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 254 K-EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           K   E D++ + G L+N    GF +    S A+  +     +G  P    Y A+I +L  
Sbjct: 148 KLGYEPDRVTI-GSLVN----GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           + R  +A   F+E++  G++P    Y AL+ G        DA  ++S+M +  + P+  T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           YS L+DA+   G+   A+ + +EM      P+   YS ++ G           Q+   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G   D   YN +I+ F K   +   M  F  M   G+  +T+T+NTLI   F+ G  D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A+E F +M   G  P   TYNI++  L +    E    +  +M+ + +  ++VTYTT++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
               ++G+ ++A      LS             GLKP  +   ++++         E  A
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS-----------LKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 613 VLQYMKENGLKPDVVTYT 630
           +   MK+ GL  +  T +
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 12/392 (3%)

Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C+      S+ +  LG+  KL YE            +T  +L++   R + +  A++L+ 
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM + GY  D + Y+ +I SL +T +++ +     +KEIE   I  +      ++ G   
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF--DFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +   S A R L       ++P   TY+A++ A   +G+ +EA+ +FEE+    + P    
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y++L+ G      + +A  +   M   G L D  +Y+ LI+ +  A R E    + +EM 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 N+  Y+ ++ G+   G+  +  +   +M   G+ PD   YN+++        L 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  F+ M    ++ D +T+ T+I    K G+ + A  LF  +  +G  P   TY  M+
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + L  +    +V+ L   M+ +GL+ N  T +
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509


>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 193/393 (49%), Gaps = 22/393 (5%)

Query: 264 DGQLLNDVIVGF----AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           D + ++ V++ F      + D +  +R LG     GL P   TY AVI A    G     
Sbjct: 130 DDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNR 189

Query: 320 EA-------VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            A       +F E+   G++     YN LL    K G +  A  ++SEM R  ++P+  T
Sbjct: 190 AAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVT 249

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           YS +ID YA AGR + A  +  EM+ +    +   Y+ +L+ Y   G ++    V KEM+
Sbjct: 250 YSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 309

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           SSG++ D   YN ++  +GK          F+ M +E I P+ +T++TLID + K G Y 
Sbjct: 310 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 369

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A E+F E ++ G       Y+ +I+ L +    E     L  M  +G+ PNVVTY +++
Sbjct: 370 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 429

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE--- 609
           D +G+SG  +DA E   G  D+  N  ++++  G     LA     +A  E++   E   
Sbjct: 430 DAFGRSGIVEDATESEVG--DKEDN--QIIKIFG----QLAAEKTCHAKKENRGRQEILC 481

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             AV   M E  +KP+VVT++ ++ A  R + F
Sbjct: 482 ILAVFHKMHELDIKPNVVTFSAILNACSRCNSF 514



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 169/388 (43%), Gaps = 44/388 (11%)

Query: 194 LTYNALISACARND-DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           +TYNA+I AC +   D  +A  +  +M                                L
Sbjct: 171 VTYNAVIDACGKGGVDFNRAAEIFDEM-------------------------------NL 199

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           + E+    IE D    N ++    K G    A + +       + P   TY+ VI   + 
Sbjct: 200 FSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAK 259

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR  EA  +F E+K + +     +YN LL  Y K+G  ++A  V  EME SG+  D  T
Sbjct: 260 AGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVT 319

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+  Y   G++E  + V +EM+     PN   YS ++  Y   G +Q   +V +E K
Sbjct: 320 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFK 379

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +G++ D   Y+ +ID   K   +  A++  D M  EGI P+ +T+N++ID   + G  +
Sbjct: 380 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVE 439

Query: 493 RAEELFEEMQER---------GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            A E   E+ ++         G      T +      G QE    +  +   M    + P
Sbjct: 440 DATE--SEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEIL-CILAVFHKMHELDIKP 496

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           NVVT++ +++   +   F+DA   LE L
Sbjct: 497 NVVTFSAILNACSRCNSFEDASMLLEEL 524



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 26/324 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+ A  +   ++ A  +MS+M +     + + YS VI    +  ++D +L   L+
Sbjct: 213 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEAL--NLF 270

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++   I LD    N ++  +AK G   +A+      +  G+     TY A++      
Sbjct: 271 NEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQ 330

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  E + VFEE+K   + P    Y+ L+  Y K G  ++A  V  E +++G+  D   Y
Sbjct: 331 GKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLY 390

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LIDA    G  ESA   L EM     +PN   Y+ I+  +   G       ++++   
Sbjct: 391 SALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG-------IVEDATE 443

Query: 434 S--GVEPDTHFYNVMIDTFGKYNCLHHA-------------MAAFDRMLSEGIEPDTITW 478
           S  G + D     +      +  C  HA             +A F +M    I+P+ +T+
Sbjct: 444 SEVGDKEDNQIIKIFGQLAAEKTC--HAKKENRGRQEILCILAVFHKMHELDIKPNVVTF 501

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQ 502
           + +++   +C  ++ A  L EE++
Sbjct: 502 SAILNACSRCNSFEDASMLLEELR 525



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 18/183 (9%)

Query: 470 GIEPDTITWNTLIDCHFKCG-RYDRAEELFEEMQ------ERGYFPCTTTYNIMINLLGE 522
           G++P+ +T+N +ID   K G  ++RA E+F+EM        RG      TYN +++ + +
Sbjct: 165 GLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCK 224

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
             + +   +++  M  + ++PNVVTY+T++D Y ++GR D+A+           N F  M
Sbjct: 225 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEAL-----------NLFNEM 273

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +   +    ++ N+L++ + +  R  EA  V + M+ +G+K D VTY  L+    +  K+
Sbjct: 274 KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKY 333

Query: 643 HKV 645
            +V
Sbjct: 334 EEV 336



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 9/128 (7%)

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSG-RFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           R LGN    GL PN+VTY  ++D  G+ G  F+ A E  +      +N F  M   G++ 
Sbjct: 156 RELGNRGDSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFD-----EMNLFSEMLYRGIEQ 210

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
                N+L++A  +  +   AF ++  M    + P+VVTY+T++       R+D+   +F
Sbjct: 211 DIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLF 270

Query: 647 SSYLFFNI 654
           +   F +I
Sbjct: 271 NEMKFASI 278


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 218/474 (45%), Gaps = 18/474 (3%)

Query: 168 ILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQD 222
           ILI  L R  +L +A    +    +   P  +++NAL+S   +   ++ A +    M + 
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   D  +Y++++  L     ++ +L  +   ++E   +E D    N +  GF   G  S
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEAL--EFTNDMENHGVEPDIVTYNILANGFRILGLIS 357

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A + +      GL+P   TY  +I      G   E+  + E++   GLK     Y  LL
Sbjct: 358 GAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLL 417

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               K G + +A  ++ EME  G+ PD  TYS+LI      G  E A  + +EM      
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PNSF+ S I++G  ++G           +  S V  +   YN+MID + K   +  A+ +
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           + +++ +GI P  +T+N+LI    K G+   A +L + ++  G  P + TY  ++N   E
Sbjct: 538 YKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCE 597

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           +     +  +L  M A+ + P  +TYT +V    + GR  ++++ L           + M
Sbjct: 598 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL-----------KYM 646

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              GL P  +  N++I +F +     +AF +   M ++ L+P  VTY  L+  L
Sbjct: 647 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 211/488 (43%), Gaps = 31/488 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+IL +       +  A+ + QR  L  L     TY  LI    +  ++E++  L  KM 
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y++++ SL ++ +ID +++  L  E+E   ++ D    + +I G  K G 
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVI--LLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+          + P +   +A+I+ L   G   EA+  F+ + +S +      YN 
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K+G + +A     ++   G+ P   T++ LI  +   G+   A  +L  ++V  
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P S  Y+ ++ GY + G+    F +L EM++  ++P    Y V++    K   LH ++
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 640

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M + G+ PD IT+NT+I    K     +A +L  +M +    P   TYN++IN L
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
                 +D  RLL  ++ Q +    V YTT++  +   G   +A+               
Sbjct: 701 CVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSI 760

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C   L   A   F +M T G+ P       ++NAF         F +   
Sbjct: 761 RDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAM 820

Query: 617 MKENGLKP 624
           M + GL P
Sbjct: 821 MIKCGLLP 828



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 214/457 (46%), Gaps = 18/457 (3%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  + ++ L  A +R + +  AL +++KM+          Y+ ++ +L  T+     ++ 
Sbjct: 166 LNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTD-----IMW 220

Query: 251 KLYKEIECDKIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +Y EI+   +    +  N +++ G  +      A+ FL    G    P   ++ A+++ 
Sbjct: 221 DVYNEIKASGVP-QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSG 279

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G    A++ F  + + GL P   +YN LL G    G +++A    ++ME  GV PD
Sbjct: 280 FCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD 339

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY++L + +   G    A  V++ M ++   P+   Y+ ++ G+   G  + +F++ +
Sbjct: 340 IVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKE 399

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M S G++     Y V++ +  K   +  A+     M   G++PD +T++ LI    K G
Sbjct: 400 KMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRG 459

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             + A EL+EEM  +  +P +   + +I+ L E+    + +    ++    +   ++ Y 
Sbjct: 460 AVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYN 519

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            ++D Y + G              +AV +++ +   G+ P+ +  NSLI  F +  + AE
Sbjct: 520 IMIDGYAKLGNI-----------GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A  +L  +K +GL P  VTYTTLM         H +F
Sbjct: 569 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 165/408 (40%), Gaps = 42/408 (10%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTPLTY--NALISACARNDDLEKALNLMSK 218
           L YS+LIH L +   + EA  L +    +R+ P ++  +A+IS       + +A      
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + +     + I Y+++I    +   I  ++  + YK+I    I       N +I GF K 
Sbjct: 506 VTKSDVAEEIILYNIMIDGYAKLGNIGEAV--RSYKQIIEKGISPTIVTFNSLIYGFCKK 563

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  ++A++ L   +  GL P + TY  ++      G       +  E++   +KP    Y
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             ++KG  K G L ++  ++  M   G+ PD+ TY+ +I ++  A               
Sbjct: 624 TVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKA--------------- 668

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                                + Q+ FQ+  +M    ++P    YNV+I+    Y  L  
Sbjct: 669 --------------------HDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKD 708

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      +  + I    + + T+I  H   G    A   F +M ERG+      Y+ +IN
Sbjct: 709 ADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVIN 768

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            L ++    D K     M   G+ P+      +++ + +SG  +   E
Sbjct: 769 RLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 816


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 195/401 (48%), Gaps = 30/401 (7%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  + A+  L   QG GLSP   TY  ++ A    G   EA A+   +K  G+ P    Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME- 397
           N L+  + ++G++K A  VV  M   G  PD  TY++L      AG+ + A  +  EME 
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341

Query: 398 VSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +  A P+   Y+ ++ A ++ R       ++L+EM+  GV+P    +N+++ +  K   L
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCS-SDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+   +++  EG+ PD IT+NTLID + K G   +A  L +EM  +G    T T N +
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE--- 566
           +  L + +R+ED + LL +   +G +P+ V+Y T++  Y +          +D  IE   
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 567 ---------CLEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                     ++GL       +A++        GL P     N +I+A+ ++     AF 
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
               M EN  KPDVVT  TLM  L    ++DK  K+F S++
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 253/616 (41%), Gaps = 84/616 (13%)

Query: 101 SALASSPSSLNRVEFKLAESY---RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           SAL+ SPS+L +    +  S    R  P     +LL +   S  ++  A A +S +Q   
Sbjct: 179 SALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFG 238

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKA 212
           L     + Y+ L++A  R   L EA  L  R +      T  TYN L+SA AR   +++A
Sbjct: 239 LSPD-AVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQA 297

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
             ++  M   G+  D   Y+++   L +  K+D +   K       D++E  G  L DV+
Sbjct: 298 TKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLK-------DEMERLGTALPDVV 350

Query: 273 V------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                     K   +S A+R L   +  G+ P   T+  V+ +L   G+  EA    E++
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKI 410

Query: 327 KESGLKPRTKAYNALLKGYVKMGYL----------------------------------- 351
            E GL P    YN L+  Y K G +                                   
Sbjct: 411 AEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           +DAE ++    + G +PDE +Y  ++ AY      E A  +  +M      P+   Y+ +
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G       +     L E    G+ PD   YN++I  + K   L +A    ++M+    
Sbjct: 531 IKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD +T NTL++     G+ D+A +LFE   E+G      TYN +I  + +    +    
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
              +M  +GL P+  TY  ++    ++GR ++A   L  L+D      +      LKPS+
Sbjct: 651 FFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLKPSS 709

Query: 592 L-----------------------ALNSL---INAFGEDQRDAEAFAVLQYMKENGLKPD 625
                                   AL +    +N      +  EA AVL  M + G+  D
Sbjct: 710 ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVD 769

Query: 626 VVTYTTLMKALIRVDK 641
             TY TLM+ LI+  K
Sbjct: 770 CSTYITLMEGLIKRQK 785


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 216/449 (48%), Gaps = 14/449 (3%)

Query: 177 EKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           EK Y+   L++   LTP TY+  ISA  +++ +E    L+  M + G   D    ++ I 
Sbjct: 213 EKYYD-MALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIY 271

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L + N++  +L  ++ +++       D      V+ G       ++A+          L
Sbjct: 272 YLCKQNRLPDAL--QMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDL 329

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   +  A+I  L  + +  EA  +   +    ++     YNAL+ G+ + G +  A  
Sbjct: 330 KPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYK 389

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++S M  +G  PD  TY++L++ Y   G  E A  ++++ME S   P+ + Y+++L G  
Sbjct: 390 IISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLC 449

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
              +  + F  + +    G   DT   N++ID F K   +  A+  F  M  +G++ D +
Sbjct: 450 KTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAV 509

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ TLI+  F  G Y+ AEELFE+M      P    YNIM++ L +   ++  + +  +M
Sbjct: 510 TYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHM 569

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + + P+ VT+ TL+   G+  R   AIE        A+N F+ MRT G++P  L    
Sbjct: 570 IQKEVSPDTVTFNTLIYWLGKRSR---AIE--------ALNLFKDMRTRGVEPDTLTFKY 618

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           LI+   ++ +   A+ V +YM ENG+  D
Sbjct: 619 LISGLLDEGKSTLAYEVWEYMMENGIILD 647



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 208/478 (43%), Gaps = 16/478 (3%)

Query: 162 YELLYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y +L S  + A G+ + + E F  ++    R   + YN  I    +N   +         
Sbjct: 161 YRILLSGYVRA-GKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMA 219

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+      YS  I +L ++N+I+  L+Q+L  +++      D    N  I    K  
Sbjct: 220 LAKGFCLTPFTYSRWISALCQSNRIE--LVQELLVDMDKLGCSPDIWACNIYIYYLCKQN 277

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A++ +   +  G SP   TY  V++ L ++ +  EA  ++EE+ +  LKP   +  
Sbjct: 278 RLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCG 337

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ G  K   + +A  + S M    +      Y+ LI  +  AG  + A  ++  M  +
Sbjct: 338 ALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTN 397

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+   Y+ +L  Y   G  ++  +++++M++SGV PD + YN ++    K + L  A
Sbjct: 398 GCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKA 457

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            A     +  G   DT++ N LID   K  +   A ELF+EM  +G      TY  +IN 
Sbjct: 458 FAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLING 517

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L     +   + L   M    + PNV  Y  ++    + G F            +A   F
Sbjct: 518 LFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFK-----------RAQTIF 566

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             M    + P  +  N+LI   G+  R  EA  + + M+  G++PD +T+  L+  L+
Sbjct: 567 SHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLL 624



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
            +++Q+L R      S+  +   E+E   +ELD  ++N V+ G +   D+  A+RF   A
Sbjct: 63  GIILQALER------SMCSEPLVELERLDVELDPIVVNLVVRGLS---DSETAVRFYWWA 113

Query: 292 QG-VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           +   G        A +++ L   G           +K  G+      Y  LL GYV+ G 
Sbjct: 114 ESRPGFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGK 173

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP---NSFI 407
                    EM  SG       Y+  I        ++   +V K  +++ AK      F 
Sbjct: 174 FDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFD---LVEKYYDMALAKGFCLTPFT 230

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           YSR ++        +   ++L +M   G  PD    N+ I    K N L  A+   ++M 
Sbjct: 231 YSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMR 290

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           ++G  PD +T+ T++       ++  A  L+EEM +R   P   +   +I  L +  + +
Sbjct: 291 TKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVD 350

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   L   M    +  +V  Y  L+  + ++G  D A + +             MRT+G 
Sbjct: 351 EAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIIS-----------FMRTNGC 399

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +P  +  N L+N +       +A  +++ M+ +G+ PD  +Y  L+K L +  +  K F+
Sbjct: 400 EPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFA 459



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 42/326 (12%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LI  L ++ K+ EAF L+ R       L+   YNALIS   R   ++KA  ++S MR +G
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D + Y++++        ++ +  +KL +++E   +  D    N ++ G  K     K
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKA--EKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDK 456

Query: 284 AMRFL-------GMAQGV----------------------------GLSPKTATYAAVIT 308
           A  F+       G    V                            G+     TY  +I 
Sbjct: 457 AFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLIN 516

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L + G    AE +FE++  + + P    YN +L    K+G+ K A+ + S M +  V P
Sbjct: 517 GLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSP 576

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  T++ LI       R   A  + K+M     +P++  +  +++G  D G+    ++V 
Sbjct: 577 DTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYN 454
           + M  +G+  D      +I      N
Sbjct: 637 EYMMENGIILDREVSERLISVLKSKN 662


>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 147/604 (24%), Positives = 267/604 (44%), Gaps = 57/604 (9%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLK 134
           LS     Y +  LL+ L++   +E A A           E  +     +V      SLL+
Sbjct: 165 LSCAPNSYTYNCLLDALAKAGRAEDAEARLQ--------EMVVTCGDESVDRYTLTSLLQ 216

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ----- 189
             C++    D A AV+  + K    +  E + ++LI A  +  K+ +A  L  R      
Sbjct: 217 CYCNAGRPED-ASAVLQRMSKR--AWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDM 273

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    T + L+   AR   ++ A+N+  KM   G+  D   YS++I+ L   N++  ++ 
Sbjct: 274 RPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAV- 332

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT--YAAVI 307
            KL+++++ D+I  D +LL  +I  F + GD S    F+     V L P +A   Y  ++
Sbjct: 333 -KLFEDMKRDRITPDVRLLKKIIEAFCRQGDFSTVGPFIN-ENAVHLKPGSAVLLYNVIL 390

Query: 308 TALSNSGRTIEAEAVFEELKE----------------------SGLKPRTKAYNALLKGY 345
             L N G   E EA ++ L                          +KP + ++N ++ G 
Sbjct: 391 DGLINHG---EVEAAYQLLSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGL 447

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K+  L  A  +  +M   G       ++ LI    N+G+ + A  +  +M+    KP+ 
Sbjct: 448 CKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSE 507

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
           F Y+ +L G   R +      +L+EM+++  +P       M+        +  A+   D 
Sbjct: 508 FTYNSLLYGICRRKDTSAAADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDG 567

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ML  G  PD +T++  ++   K G  + A  LF ++  + Y P    +NI+IN   +  +
Sbjct: 568 MLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGK 627

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           +++ + ++  M ++G+LP+VVTY  ++DI+ +SG  D AI C+  + D+           
Sbjct: 628 FDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEK--------- 678

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
              P+ +   SL++      R  EA  +   M+E G  P+ + YT L+  L +  +    
Sbjct: 679 --PPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYTALVNGLCKCGRMETA 736

Query: 646 FSSY 649
            + Y
Sbjct: 737 VNYY 740



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 215/514 (41%), Gaps = 62/514 (12%)

Query: 195 TYNALISACA---RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLL 249
           TYN L+ A A   R +D E  L  M     D    D    + ++Q      + +  S++L
Sbjct: 173 TYNCLLDALAKAGRAEDAEARLQEMVVTCGD-ESVDRYTLTSLLQCYCNAGRPEDASAVL 231

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           Q++ K     +  +D  +L  +IV ++K G    A+  LG  + + + P   T + ++  
Sbjct: 232 QRMSK-----RAWVDEHVLTMLIVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHG 286

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+  GR   A  +F ++   G       Y+ L++G      +  A  +  +M+R  + PD
Sbjct: 287 LARQGRVDVAMNMFGKMASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDRITPD 346

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS--FIYSRILAGYRDRGEWQRTFQV 427
                 +I+A+   G + +    + E  V H KP S   +Y+ IL G  + GE +  +Q+
Sbjct: 347 VRLLKKIIEAFCRQGDFSTVGPFINENAV-HLKPGSAVLLYNVILDGLINHGEVEAAYQL 405

Query: 428 LKEMK-------------------SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           L  M                    +  V+P++  +N+++    K   L  A+A    M+ 
Sbjct: 406 LSSMVRGDQRVSDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVG 465

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G +   + +N LI      G+ D A E+F +M++ G  P   TYN ++  +  ++    
Sbjct: 466 LGCKGKLLMFNDLILELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSA 525

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL----------------- 571
              LL  MRA    P +   T +V     SGR  +A++ L+G+                 
Sbjct: 526 AADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMN 585

Query: 572 -------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                   + A+  F  + +    P  +A N LIN F +  +  EA  +++ M   G+ P
Sbjct: 586 GMCKVGDIENALGLFLDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLP 645

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKML 658
            VVTY  ++    +     K  +      +YKM+
Sbjct: 646 SVVTYNLMIDIWCKSGSIDKAITC-----VYKMI 674



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 218/521 (41%), Gaps = 58/521 (11%)

Query: 160 YSYEL-LYSILIHAL------GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLE 210
           +S +L +YS+LI  L      G++ KL+E     +R R+TP       +I A  R  D  
Sbjct: 308 FSVDLAMYSVLIEGLCHGNEMGKAVKLFEDM---KRDRITPDVRLLKKIIEAFCRQGDFS 364

Query: 211 KALNLMSKMRQDGYHCD----FINYSLVIQSLTRTNKIDSS--LLQKLYKE--------- 255
                ++   ++  H       + Y++++  L    +++++  LL  + +          
Sbjct: 365 TVGPFIN---ENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRGDQRVSDDDT 421

Query: 256 ------IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                 +  + ++ +    N V+ G  K      A+       G+G   K   +  +I  
Sbjct: 422 VGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILE 481

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L NSG+  EA  +F ++K+ GLKP    YN+LL G  +      A  ++ EM  +   P 
Sbjct: 482 LCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPW 541

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
               + ++     +GR   A   L  M      P+   YS  + G    G+ +    +  
Sbjct: 542 IKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFL 601

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++ S    PD   +N++I+ F K      A    + MLS+G+ P  +T+N +ID   K G
Sbjct: 602 DISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSG 661

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A     +M +    P   TY  +++ L    R ++   L   MR +G  PN + YT
Sbjct: 662 SIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWCKMREKGCSPNGIAYT 721

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP---SNLALNSLINAFGEDQR 606
            LV+   + GR            + AVN +  M+T G      S L L +L+ A G+  +
Sbjct: 722 ALVNGLCKCGRM-----------ETAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQGQASK 770

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             E   V+       L+ DVV +   +K +  V+K  K  S
Sbjct: 771 GCELLKVV-------LQKDVV-HNNHLKMVDLVNKAAKELS 803


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 210/466 (45%), Gaps = 36/466 (7%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
           AR DD+     + S M Q G       Y+ ++ S  +  ++D ++   L K++E      
Sbjct: 208 ARWDDMRA---VYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAV--ALLKDME---ARA 259

Query: 264 DGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTA--TYAAVITALSNSGRT 316
            G L NDV     I G A+ G+  KA + + + +   LS K +  TY  +IT L      
Sbjct: 260 AGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR---LSKKASAFTYNPLITGLLARDFV 316

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A A+  E++  G+ P    YN L+ G  K G  + A+    EM   G+LPD  TY+ L
Sbjct: 317 EKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSL 376

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+ Y  AG  + A  +  +++ +   P    Y+ ++ GY   G+ +   ++ +EM     
Sbjct: 377 INGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDC 436

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y ++++       L      FD MLS+G+EPD   +NT I      G    A +
Sbjct: 437 LPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQ 496

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L EEM  RG    T TYN++I+ L +    +D   L   M   GL  + VTYT L+  + 
Sbjct: 497 LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + GR             +A N F  M   GL PS +     I+ +        A+   + 
Sbjct: 557 ERGRLI-----------EAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605

Query: 617 MKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSSYLFFNIY 655
           M E G++P+ VTY  LM AL R+ +       FH++    L  N Y
Sbjct: 606 MLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKY 651



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 194/443 (43%), Gaps = 14/443 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN +I+  AR  +LEKA  L+  MR       F  Y+ +I  L   + ++ +    L 
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIMRLSKKASAF-TYNPLITGLLARDFVEKA--GALL 323

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+E + I       N +I G  K G+A  A       +  GL P   TY ++I     +
Sbjct: 324 LEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKA 383

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   +A  +F +LK +GL P    YN L+ GY ++G L+ A  +  EM     LPD  TY
Sbjct: 384 GNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTY 443

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L++           RI   EM     +P+ F Y+  ++     G     FQ+ +EM  
Sbjct: 444 TILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMML 503

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+  DT  YNV+ID   K   L  A   + +M+++G+  D +T+  LI  H + GR   
Sbjct: 504 RGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIE 563

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ +F+ M   G  P   TY I I+    +            M  +G+ PN VTY  L+ 
Sbjct: 564 AKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMH 623

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + GR           ++ A   F  M   GL P+      LI+   ++     A  +
Sbjct: 624 ALCRMGR-----------TESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRL 672

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
              M + G+ PD  T+  L K  
Sbjct: 673 YCEMHQKGIHPDHCTHNALFKGF 695



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 220/483 (45%), Gaps = 44/483 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           +++LL + C +   +D A A++  ++     C   ++ Y+++I+ L R  +L +A  L  
Sbjct: 232 YNTLLDSFCKA-GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD 290

Query: 188 RQRLT----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             RL+      TYN LI+     D +EKA  L+ +M  +G     + Y+ +I  L +T  
Sbjct: 291 IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGN 350

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +++  Q  + E+    +  D    N +I G+ KAG+  +A+   G  +  GL P   TY
Sbjct: 351 AEAA--QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTY 408

Query: 304 AAVI-------------------------------TALSNSGRTIEAEAV----FEELKE 328
             +I                               T L N    +   A+    F+E+  
Sbjct: 409 NILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLS 468

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+P   AYN  +   + +G + +A  +  EM   G+  D  TY++LID     G  + 
Sbjct: 469 KGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKD 528

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++  +M     + +   Y+ ++  + +RG       +   M +SG+ P    Y + I 
Sbjct: 529 AYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIH 588

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           T+ +   L+ A   F +ML EG+EP+ +T+N L+    + GR + A + F EM ERG  P
Sbjct: 589 TYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVP 648

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY ++I+   ++  W    RL   M  +G+ P+  T+  L   +G+ G   DA++ L
Sbjct: 649 NKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYL 707

Query: 569 EGL 571
           E +
Sbjct: 708 ENV 710



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 14/358 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P       V+  L ++ R  +  AV+ ++ + G++P    YN LL  + K G +  A
Sbjct: 189 GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQA 248

Query: 355 EFVVSEME--RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
             ++ +ME   +G LP++ TY+++I+  A  G  E A  ++  M +S  K ++F Y+ ++
Sbjct: 249 VALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLI 307

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G   R   ++   +L EM++ G+ P    YN +ID   K      A   FD M ++G+ 
Sbjct: 308 TGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLL 367

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+N+LI+ + K G   +A  LF +++  G  P   TYNI+I+        E  +RL
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
              M  +  LP+V TYT L++             C+          F  M + GL+P   
Sbjct: 428 KEEMTEEDCLPDVCTYTILMN-----------GSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           A N+ I+A         AF + + M   G+  D VTY  L+  L +       +  ++
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWM 534



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 14/187 (7%)

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           +C    ++AF  M   G+ P     N ++       R+D    ++ +M + G  P   TY
Sbjct: 173 SCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTY 232

Query: 514 NIMINLLGEQERWEDVKRLLGNM--RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           N +++   +  R +    LL +M  RA G LPN VTY  +++   + G  + A       
Sbjct: 233 NTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAA------ 286

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             Q V+  R+ +    K S    N LI          +A A+L  M+  G+ P VVTY T
Sbjct: 287 --QLVDIMRLSK----KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNT 340

Query: 632 LMKALIR 638
           L+  L +
Sbjct: 341 LIDGLFK 347


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 230/491 (46%), Gaps = 22/491 (4%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           +D A  +   L + N C      Y+IL+ AL  + ++ +A  L       P  +TY  ++
Sbjct: 238 LDEAVQLFQELPEKNTCS-----YNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMV 292

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
                  +LE A+ L+S+M   G   + + Y+ VI  L    ++  ++  ++ +++    
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV--RVVEDMVMHG 350

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           + LD  +   V+ GF + GD + A  +    Q  GL+    TY A+I  L  +G   EAE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            V +E+++ GL      Y  L+ GY K+G + +A  V ++M +  V P+  TY+ L D  
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G   +A  +L EM     + N F Y+ ++ G    G  ++  + + +M  +G++PD 
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + Y  +I    +   L  A +    ML +GI+P  +T+N L++     GR +  + L E 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M E+   P TTTYN ++     ++  +    +   M +Q ++PN  TY  L+  + ++  
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
             +A   L   S+     FR+  +        + N+LI    + ++  EA  + + M++ 
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTAS--------SYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 621 GL--KPDVVTY 629
            L  +PDV  +
Sbjct: 700 RLTAEPDVYNF 710



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 198/448 (44%), Gaps = 16/448 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+ A      ++ A  L  +M       D + Y +++      +++++++  KL  
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAI--KLLS 309

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +EL+      VI      G  S A+R +      G+    A +  V++     G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A   F+E+++ GL      Y AL+ G  + G LK+AE V+ EME  G+  D  TY+
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID Y   G+   A +V  +M      PN   Y+ +  G   +G+     ++L EM S 
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E +   YN +I+   K   L  AM     M   G++PD  T+ T+I    +    DRA
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM ++G  P   TYN+++N      R E  KRLL  M  + + PN  TY +L+  
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y           C+E         ++ M +  + P+    N LI    + +   EA    
Sbjct: 610 Y-----------CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
             M E G +    +Y  L++ L +  KF
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKF 686



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 6/382 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +  ++S   R  DL  A N   +M++ G   D + Y+ +I  L R  ++  +  +++ +
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA--ERVLQ 414

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+E   +++D      +I G+ K G  ++A           ++P   TY A+   L   G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  E+   GL+     YN+L+ G  K G L+ A   + +M+ +G+ PD +TY+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I A   +   + A  +L+EM     KP    Y+ ++ G+   G  +   ++L+ M   
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P+T  YN ++  +     +      +  MLS+ + P+  T+N LI  H K      A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
                EM E+G+    ++YN +I LL +++++ + +RL   MR + L      Y   +D+
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714

Query: 555 YGQSGRFDDAIECLEGLSDQAV 576
                  +D +E    L D+ V
Sbjct: 715 SFN----EDNLESTLALCDELV 732



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 25/359 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+SP   +  AV+  L       EA  +F+EL E      T +YN LLK     G +KDA
Sbjct: 221 GISPSPESCNAVLCRLPLD----EAVQLFQELPEKN----TCSYNILLKALCTAGRIKDA 272

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM      PD  TY +++  Y      E+A  +L EM     + N   Y+ ++A 
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             D G+     +V+++M   GV  D   +  ++  F +   L  A   FD M   G+  D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  LI+   + G    AE + +EM+++G      TY ++I+   +  +  +   +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + PNVVTYT L D   + G    A E L             M + GL+ +    
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE-----------MCSKGLELNIFTY 498

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           NSLIN   +     +A   +  M E GLKPDV TYTT++ AL +   +D+ H +    L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 163/386 (42%), Gaps = 15/386 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSW---LQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A ++ +++   C      DLA A  +W   +QK  L  +  + Y+ LI+ L R+ +L EA
Sbjct: 355 AAVFTTVMSGFCRKG---DLA-AARNWFDEMQKRGLA-ADGVTYTALINGLCRAGELKEA 409

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             + Q        +  +TY  LI    +   + +A  + +KM Q     + + Y+ +   
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L +   + ++   +L  E+    +EL+    N +I G  KAG+  +AMR +      GL 
Sbjct: 470 LCKQGDVCAA--NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I AL  S     A ++ +E+ + G+KP    YN L+ G+   G ++  + +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  M    + P+  TY+ L+  Y      +S   + K M      PN   Y+ ++ G+  
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
               +       EM   G       YN +I    K      A   F++M  E +  +   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQE 503
           +N  ID  F     +    L +E+ E
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELVE 733


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 31/435 (7%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS----SL 248
           P  +N+L+ +     D   A  L+++M   G    ++ Y++ I S+    K+ S     L
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDL 405

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            +K+Y E+      L+   + +        G   KA + +      G  P T+TY+ VIT
Sbjct: 406 AEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVIT 465

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L ++ +  +A  +F+E+K  G+ P    Y  L+  + K G ++ A+++  EM   G  P
Sbjct: 466 FLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 525

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
              TY+ LI AY  A +   A  +   M  +  +PN   Y  ++ G    G   + F+V 
Sbjct: 526 TVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY 585

Query: 429 KEMKSSGVEPDTHFY----------------NVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            ++  +    D+ FY                  ++D   K + + HA    D MLS G E
Sbjct: 586 AKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCE 645

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+ I ++ LID   K G+ D A+E+F +M + GY P   TY  +I+ + +  R +   ++
Sbjct: 646 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 705

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M      PNVVTYT ++D             C  G S++A+    +M   G  P+ +
Sbjct: 706 LSQMLKDSCTPNVVTYTAMIDGL-----------CRIGESEKALKLLSLMEEKGCSPNVV 754

Query: 593 ALNSLINAFGEDQRD 607
              +LI+  G+  +D
Sbjct: 755 TYTALIDGLGQSWQD 769



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/546 (21%), Positives = 225/546 (41%), Gaps = 38/546 (6%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P+ + ++ L  + SS   +DL + V   + +   C           HAL +  +  +A  
Sbjct: 207 PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMD-RFTVGCFAHALCKEGRWADALD 265

Query: 185 LSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           + +R+  +L  +    +IS        ++A++ + +MR +    + + Y  ++    +  
Sbjct: 266 MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 325

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++     +++   +  +    +  L N ++  +    D + A + L      G  P    
Sbjct: 326 QL--GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 383

Query: 303 YAAVITALSNSGRTIE------AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           Y   I ++    +         AE ++ E+  +             +    +G    A  
Sbjct: 384 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 443

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ EM R G +PD  TYS +I    +A + E A ++ +EM++    P+ + Y+ ++  + 
Sbjct: 444 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 503

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G  ++   + +EM+S G  P    Y  +I  + K   +  A   F RM+  G  P+ +
Sbjct: 504 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 563

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEM-------QERGYFPC---------TTTYNIMINLL 520
           T+  L+D   K G   +A E++ ++           YFPC           TY  +++ L
Sbjct: 564 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 623

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  + +    LL  M + G  PN + Y  L+D + ++G+ D A E            F 
Sbjct: 624 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE-----------VFL 672

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G  PS     SLI+   +D R   A  VL  M ++   P+VVTYT ++  L R+ 
Sbjct: 673 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 732

Query: 641 KFHKVF 646
           +  K  
Sbjct: 733 ESEKAL 738



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 193/442 (43%), Gaps = 57/442 (12%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++L +EI  +  E+ G+LLN ++    + G  ++A+  LG  +  G  P   TY A++  
Sbjct: 159 ERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQV 218

Query: 310 LSNSGRTIEAEAVFEELKESGL--------------------------------KPRTKA 337
           LS++G+      V +E+ ESG                                 K  T  
Sbjct: 219 LSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVL 278

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
              ++ G ++  Y  +A   +  M  +  +P+  TY  L+  +    +    + ++  M 
Sbjct: 279 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 338

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN  +++ ++  Y +  ++   +++L  M + G  P    YN+ I +     C  
Sbjct: 339 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI----CGQ 394

Query: 458 HAMAAFDRM-LSEGIEPDTITWNTLID---------CHFKCGRYDRAEELFEEMQERGYF 507
             + + D + L+E I  + +  N +++         C    G++D+A +L +EM  +G+ 
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P T+TY+ +I  L    + E    L   M+  G+ P+V TYT L+D +           C
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF-----------C 503

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             GL +QA   F  MR+ G  P+ +   +LI+A+ + ++  +A  +   M + G +P+ V
Sbjct: 504 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 563

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           TY  L+  L +     K F  Y
Sbjct: 564 TYGALVDGLCKAGNISKAFEVY 585



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 128/534 (23%), Positives = 211/534 (39%), Gaps = 57/534 (10%)

Query: 166 YSILIHALG------RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y  L  ALG       +E+L        R+ L  L  N L+  C R     +AL  + ++
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRL-LNVLVRRCCRGGMWNEALEELGRL 200

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKE--- 255
           +  GY    + Y+ ++Q L+   ++D                           L KE   
Sbjct: 201 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 260

Query: 256 ------IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                 IE +  +LD  L   +I G  +A    +AM FL   +     P   TY  +++ 
Sbjct: 261 ADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 320

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
                +    + +   +   G  P    +N+L+  Y        A  +++ M   G  P 
Sbjct: 321 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380

Query: 370 EHTYSLLIDAYANAGRWES------ARIVLKEMEVSHA---KPNSFIYSRILAGYRDRGE 420
              Y++ I +     +  S      A  +  EM  ++    K N   ++R L G    G+
Sbjct: 381 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV---GK 437

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           + + FQ++KEM   G  PDT  Y+ +I        +  A   F  M   G+ PD  T+  
Sbjct: 438 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 497

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LID   K G  ++A+ LFEEM+  G  P   TY  +I+   + ++      +   M   G
Sbjct: 498 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLSDQAVNAFRVMRTD--GLKPSNLALN 595
             PN VTY  LVD   ++G    A E    L G SD A + F     D   L P+ +   
Sbjct: 558 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 617

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           +L++   +  +   A  +L  M  +G +P+ + Y  L+       ++D   +VF
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 23/308 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  ++   TP   TY  LI +  +   +E+A  L  +MR
Sbjct: 460 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 519

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+ +I +  +  ++  +    ++  +       +      ++ G  KAG+
Sbjct: 520 SVGCSPTVVTYTALIHAYLKAKQVPQA--NDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 577

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
            SKA        G                  L+P   TY A++  L  + +   A  + +
Sbjct: 578 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 637

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +  SG +P    Y+AL+ G+ K G +  A+ V  +M + G LP  HTY+ LID     G
Sbjct: 638 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 697

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL +M      PN   Y+ ++ G    GE ++  ++L  M+  G  P+   Y 
Sbjct: 698 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 757

Query: 445 VMIDTFGK 452
            +ID  G+
Sbjct: 758 ALIDGLGQ 765



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 161/415 (38%), Gaps = 52/415 (12%)

Query: 265 GQLLNDVIVGFAKA-GDASK--AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           G L + V+V    A  DA +  A  FL   + VG S   A Y A+  AL   GR  +AE 
Sbjct: 101 GFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAER 160

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +  E+ E   +   +  N L++   + G   +A   +  ++  G  P + TY+ L+   +
Sbjct: 161 LLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLS 220

Query: 382 NAGRWESARIVLKEMEVS-------------HA-------------------KPNSFIYS 409
           +AG+ +    V KEM  S             HA                   K ++ + +
Sbjct: 221 SAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCT 280

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +++G  +   +      L  M+ +   P+   Y  ++  F K   L       + M++E
Sbjct: 281 HMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE 340

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED- 528
           G  P+   +N+L+  +     Y  A +L   M   G  P    YNI I  +  QE+    
Sbjct: 341 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP 400

Query: 529 -----VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
                 +++ G M A   + N V            G+FD A + +           + M 
Sbjct: 401 DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI-----------KEMM 449

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             G  P     + +I       +  +AF + Q MK  G+ PDV TYT L+ +  +
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 28/401 (6%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G    G   +A   +    G GL     TY  ++  +   G T  A  +  +++
Sbjct: 13  FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 72

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E+ +KP    Y+A++    K G+  DA+++ SEM   G+ P+  TY+ +ID + + GRW 
Sbjct: 73  ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 132

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A+ +L++M      P+   ++ +++     G+     ++  EM    + PDT  YN MI
Sbjct: 133 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 192

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F K+N    A   FD M S    PD +T+NT+ID + +  R D   +L  E+  RG  
Sbjct: 193 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 248

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
             TTTYN +I+   E +     + L   M + G+ P+ +T   L+  + ++ + ++A+E 
Sbjct: 249 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 308

Query: 568 LEGLS------------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            E +                         D+A + F  +   G++P     N +I+ F  
Sbjct: 309 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 368

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               ++A  +   MK+NG +PD  TY TL++  ++  +  K
Sbjct: 369 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 409



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 211/462 (45%), Gaps = 20/462 (4%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           LTP  +T+N LI+       + +A  L++KM   G H D + Y  ++  + +     S+L
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              L  ++E   I+ D  + + +I    K G  S A          G++P   TY  +I 
Sbjct: 66  --NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
              + GR  +A+ +  ++ E  + P    +NAL+   VK G L +AE +  EM    + P
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ +I  +    R++ A+ +   M    A P+   ++ I+  Y          Q+L
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLL 239

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +E+   G+  +T  YN +I  F + + L+ A   F  M+S G+ PDTIT N L+    + 
Sbjct: 240 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 299

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            + + A ELFE +Q       T  YNI+I+ + +  + ++   L  ++   G+ P+V TY
Sbjct: 300 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 359

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             +  I G  G+          +SD  V  F  M+ +G +P N   N+LI    +     
Sbjct: 360 NVM--ISGFCGK--------SAISDANV-LFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 408

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           ++  ++  M+ NG   D  T   ++  LI   +  K FS  L
Sbjct: 409 KSIELISEMRSNGFSGDAFT-IKMVADLITDGRLDKSFSDML 449



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 18/358 (5%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +GL+P   T+  +I  L   GR +EA A+  ++   GL      Y  ++ G  KMG  K 
Sbjct: 4   IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 63

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++S+ME + + PD   YS +ID     G    A+ +  EM      PN F Y+ ++ 
Sbjct: 64  ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 123

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+   G W    ++L++M    + PD   +N +I    K   L  A    D ML   I P
Sbjct: 124 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 183

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           DT+T+N++I    K  R+D A+ +F+ M      P   T+N +I++    +R ++  +LL
Sbjct: 184 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 239

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             +  +GL+ N  TY TL+  + +               + A + F+ M + G+ P  + 
Sbjct: 240 REISRRGLVANTTTYNTLIHGFCEVDNL-----------NAAQDLFQEMISHGVCPDTIT 288

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
            N L+  F E+++  EA  + + ++ + +  D V Y  ++  +    +VD+   +F S
Sbjct: 289 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 346



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 11/408 (2%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSK 218
           + ++ LI+ L    ++ EA  L  +       +  +TY  +++   +  D + ALNL+SK
Sbjct: 11  ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 70

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +     D + YS +I  L +      S  Q L+ E+    I  +    N +I GF   
Sbjct: 71  MEETHIKPDVVIYSAIIDRLCKDGH--HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 128

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A R L       ++P   T+ A+I+A    G+  EAE + +E+    + P T  Y
Sbjct: 129 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 188

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+++ G+ K     DA+ +   M      PD  T++ +ID Y  A R +    +L+E+  
Sbjct: 189 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 244

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                N+  Y+ ++ G+ +         + +EM S GV PDT   N+++  F +   L  
Sbjct: 245 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 304

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  F+ +    I+ DT+ +N +I    K  + D A +LF  +   G  P   TYN+MI+
Sbjct: 305 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 364

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
               +    D   L   M+  G  P+  TY TL+    ++G  D +IE
Sbjct: 365 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 412



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 15/350 (4%)

Query: 164 LLYSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++YS +I  L +     +A +L S+   + + P   TYN +I           A  L+  
Sbjct: 81  VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 140

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +   + D + ++ +I +  +  K+  +  +KL  E+    I  D    N +I GF K 
Sbjct: 141 MIEREINPDVLTFNALISASVKEGKLFEA--EKLCDEMLHRCIFPDTVTYNSMIYGFCKH 198

Query: 279 G--DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              D +K M F  MA     SP   T+  +I     + R  E   +  E+   GL   T 
Sbjct: 199 NRFDDAKHM-FDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 252

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+ G+ ++  L  A+ +  EM   GV PD  T ++L+  +    + E A  + + +
Sbjct: 253 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 312

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           ++S    ++  Y+ I+ G     +    + +   +   GVEPD   YNVMI  F   + +
Sbjct: 313 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 372

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
             A   F +M   G EPD  T+NTLI    K G  D++ EL  EM+  G+
Sbjct: 373 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 422



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 19/285 (6%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+ P   T++ LI+     GR   A  ++ +M       +   Y  I+ G    G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITW 478
            +    +L +M+ + ++PD   Y+ +ID   K    HH+ A   F  ML +GI P+  T+
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG--HHSDAQYLFSEMLEKGIAPNVFTY 118

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +ID     GR+  A+ L  +M ER   P   T+N +I+   ++ +  + ++L   M  
Sbjct: 119 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 178

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + + P+ VTY +++  + +  RFDD           A + F +M +    P  +  N++I
Sbjct: 179 RCIFPDTVTYNSMIYGFCKHNRFDD-----------AKHMFDLMAS----PDVVTFNTII 223

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           + +   +R  E   +L+ +   GL  +  TY TL+     VD  +
Sbjct: 224 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 268


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 231/498 (46%), Gaps = 26/498 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G++ +  EA  ++ + +R+    + +TYN+LIS+  ++  LE+A+ L  
Sbjct: 278 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 337

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + Y+ +I  L R  KID+++++  Y E+  +  + +    N +I     
Sbjct: 338 EMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVE--YDEMVRNGCKPNLCTYNALIKMHGV 395

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   + M      +  G  P   T+  ++     +G   E   VF+E+K++G  P    
Sbjct: 396 RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  GRWE A  +  EME
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+ + YS +L  Y +     +   +  ++ S  +EP       ++    K N L 
Sbjct: 516 ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 575

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  AF  +  +    D    N ++  + K     + E++   M+E        TYN ++
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 635

Query: 518 NL---LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++   LG+ E+ E++   L  +++ G+ P+  +Y T++  YG+ G+             +
Sbjct: 636 HMYSRLGDCEKCENI---LTEIKSSGVRPDRYSYNTVIYAYGRKGQM-----------KE 681

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   F  M+  GLKP  +  N  + ++  +    EA  +++YM   G KP+  TY ++++
Sbjct: 682 ASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 741

Query: 635 ALIRVDKF--HKVFSSYL 650
              R  K    K+F S L
Sbjct: 742 GYCRNGKLTDAKIFVSNL 759



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 221/504 (43%), Gaps = 34/504 (6%)

Query: 170 IHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           I  + R+ +L EA  LL          Y AL+SA +R      A+ +  +M   G     
Sbjct: 148 IRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAI 207

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y++V+   ++   +    + +L   ++   +  D    N +I    +     +A +  
Sbjct: 208 VTYNVVLHVYSKM-AVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVF 266

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              +  G  P   T+ +++     + R  EA  V +E++  G  P    YN+L+  YVK 
Sbjct: 267 DEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKD 326

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L+ A  +  EME  G+ PD  TY+ LI     AG+ ++A +   EM  +  KPN   Y
Sbjct: 327 GLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY 386

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++  +  RG++     V  E++S+G  PD   +N ++  FG+          F  M  
Sbjct: 387 NALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 446

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G  P+  T+ +LI  + +CG +D A ++++ M E G +P  +TYN +++ L    RWE 
Sbjct: 447 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQ 506

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--------------- 573
            ++L   M  +   P+  +Y++L+  Y  + R D     ++ LSD               
Sbjct: 507 AEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK----MKALSDDIYSERIEPHNWLVK 562

Query: 574 -------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                        +A  AF  +R          LN++++ +G+++   +   +L  MKE+
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 621 GLKPDVVTYTTLMKALIRVDKFHK 644
            +     TY +LM    R+    K
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEK 646



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 20/275 (7%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTPLTY--NALISACARNDDLEKAL 213
           C   E  YS L+HA   +++L +   LS     +R+ P  +    L+   ++ ++L +A 
Sbjct: 519 CKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 578

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
               ++RQ     D IN    + S+   N++   + +K+   ++   I L     N ++ 
Sbjct: 579 KAFLELRQKRCSLD-INVLNAMVSIYGKNRMVRKV-EKILSLMKESAINLSAATYNSLMH 636

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +++ GD  K    L   +  G+ P   +Y  VI A    G+  EA  +F E+K SGLKP
Sbjct: 637 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN  +K YV     ++A  +V  M   G  P+E TY+ +++ Y   G+   A+I +
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 756

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
             +   H             GY  + E Q  F+VL
Sbjct: 757 SNLPQLH------------PGY-SKQEQQNLFEVL 778


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 231/498 (46%), Gaps = 26/498 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G++ +  EA  ++ + +R+    + +TYN+LIS+  ++  LE+A+ L  
Sbjct: 260 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 319

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + Y+ +I  L R  KID+++++  Y E+  +  + +    N +I     
Sbjct: 320 EMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE--YDEMVRNGCKPNLCTYNALIKMHGV 377

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   + M      +  G  P   T+  ++     +G   E   VF+E+K++G  P    
Sbjct: 378 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 437

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  GRWE A  +  EME
Sbjct: 438 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 497

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+ + YS +L  Y +     +   +  ++ S  +EP       ++    K N L 
Sbjct: 498 ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 557

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  AF  +  +    D    N ++  + K     + E++   M+E        TYN ++
Sbjct: 558 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 617

Query: 518 NL---LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++   LG+ E+ E++   L  +++ G+ P+  +Y T++  YG+ G+             +
Sbjct: 618 HMYSRLGDCEKCENI---LTEIKSSGVRPDRYSYNTVIYAYGRKGQM-----------KE 663

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   F  M+  GLKP  +  N  + ++  +    EA  +++YM   G KP+  TY ++++
Sbjct: 664 ASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 723

Query: 635 ALIRVDKF--HKVFSSYL 650
              R  K    K+F S L
Sbjct: 724 GYCRNGKLTDAKIFVSNL 741



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 233/540 (43%), Gaps = 35/540 (6%)

Query: 134 KNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQRQRLT 192
           ++L S     +LA      L    + +   +L +  I  + R+ +L EA  LL       
Sbjct: 95  RDLLSGLPGAELAAVAARELHGEGVLHHPRVL-ATAIRVMARAGRLAEASALLDAAPGPD 153

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
              Y AL+SA +R      A+ +  +M   G     + Y++V+   ++   +    + +L
Sbjct: 154 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKM-AVPWKEVVEL 212

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
              ++   +  D    N +I    +     +A +     +  G  P   T+ +++     
Sbjct: 213 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 272

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           + R  EA  V +E++  G  P    YN+L+  YVK G L+ A  +  EME  G+ PD  T
Sbjct: 273 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 332

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LI     AG+ ++A +   EM  +  KPN   Y+ ++  +  RG++     V  E +
Sbjct: 333 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 392

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S+G  PD   +N ++  FG+          F  M   G  P+  T+ +LI  + +CG +D
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++++ M E G +P  +TYN +++ L    RWE  ++L   M  +   P+  +Y++L+
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512

Query: 553 DIYGQSGRFDDAIECLEGLSD----------------------------QAVNAFRVMRT 584
             Y  + R D     ++ LSD                            +A  AF  +R 
Sbjct: 513 HAYANAKRLDK----MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQ 568

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                    LN++++ +G+++   +   +L  MKE+ +     TY +LM    R+    K
Sbjct: 569 KRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEK 628



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 7/247 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTPLTY--NALISACARNDDLEKAL 213
           C   E  YS L+HA   +++L +   LS     +R+ P  +    L+   ++ ++L +A 
Sbjct: 501 CKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 560

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
               ++RQ     D IN    + S+   N++   + +K+   ++   I L     N ++ 
Sbjct: 561 KAFLELRQKRCSLD-INVLNAMVSIYGKNRMVRKV-EKILSLMKESAINLSAATYNSLMH 618

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +++ GD  K    L   +  G+ P   +Y  VI A    G+  EA  +F E+K SGLKP
Sbjct: 619 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 678

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN  +K YV     ++A  +V  M   G  P+E TY+ +++ Y   G+   A+I +
Sbjct: 679 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 738

Query: 394 KEMEVSH 400
             +   H
Sbjct: 739 SNLPQLH 745


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 222/523 (42%), Gaps = 21/523 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL------GRSEKLYEAF 183
           H L++ +  ++  +++      W  K          Y  LIH L      G   K+ +  
Sbjct: 90  HWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEM 149

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           + S    +TP+  + +I        + KA+ +  +++          Y+ +I  L    +
Sbjct: 150 VRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQ 209

Query: 244 IDSSLLQKLYKEIECD-KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +   + +LY E+  +     D    + +I  F K G    A+R L   +  G+ P    
Sbjct: 210 YEK--VHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I+          A ++FEE++    +P    Y  L++G  K G + +A     EM+
Sbjct: 268 YTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQ 327

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEW 421
           R    PD    + +I+    AGR +    + +EM VSH  PN   Y+ I+ A +  +   
Sbjct: 328 REDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRV 387

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              F   + MK SG+ P    Y+++ID F K N +  AM   + M  +G  P    + +L
Sbjct: 388 SEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSL 447

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K  RYD A ELF+E++E         Y +MI  LG+  R +D   L   M   G 
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGC 507

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNV  Y  L+    ++        C   + D+A+   R M+  G  P   + N ++N  
Sbjct: 508 TPNVYAYNALMSGLARA--------C---MLDEALTTMRKMQEHGCLPDINSYNIILNGL 556

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +      A  +L  MK + +KPD V+Y T++ AL     F +
Sbjct: 557 AKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEE 599



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 193/422 (45%), Gaps = 19/422 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +Y  +  +LIH  G+ EK++E +  +S      P  +TY+ALISA  +    + A+ L++
Sbjct: 196 AYNSMIIMLIHE-GQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLN 254

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M+++G       Y+++I    + + +  +L   L++E+       D     ++I G  K
Sbjct: 255 EMKENGMQPTAKIYTMIISLFFKLDNVHGAL--SLFEEMRYMYCRPDVFTYTELIRGLGK 312

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A  F    Q     P T     +I  L  +GR  +   +FEE+  S   P    
Sbjct: 313 AGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVT 372

Query: 338 YNALLKGYVKMGYLKDAEFVVSE-------MERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           YN ++K       L +++  VSE       M+ SG+ P   TYS+LID +    R E A 
Sbjct: 373 YNTIIKA------LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAM 426

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++L+EM+     P    Y  ++        +    ++ +E+K +        Y VMI   
Sbjct: 427 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL 486

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           GK   L  A+  FD M   G  P+   +N L+    +    D A     +MQE G  P  
Sbjct: 487 GKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDI 546

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +YNI++N L +         +L NM+   + P+ V+Y T++     +G F++A E ++ 
Sbjct: 547 NSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKE 606

Query: 571 LS 572
           ++
Sbjct: 607 MN 608



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 187/408 (45%), Gaps = 14/408 (3%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A   LGR +         +   + P    Y  +IS   + D++  AL
Sbjct: 226 CHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGAL 285

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L  +MR      D   Y+ +I+ L +  +ID +     Y E++ +  + D  ++N++I 
Sbjct: 286 SLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAY--HFYHEMQREDCKPDTVVMNNMIN 343

Query: 274 GFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKES 329
              KAG   D  K    +G++  +   P   TY  +I AL  S  R  E  + FE +K S
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCI---PNVVTYNTIIKALFESKSRVSEVFSWFERMKGS 400

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LIDA   A R++ A
Sbjct: 401 GISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + +E++ +    ++ +Y+ ++      G       +  EM   G  P+ + YN ++  
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSG 520

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +   L  A+    +M   G  PD  ++N +++   K G   RA E+   M+     P 
Sbjct: 521 LARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPD 580

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +YN +++ L     +E+   L+  M A G   +++TY+++++  G+
Sbjct: 581 AVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 213/448 (47%), Gaps = 24/448 (5%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQK-LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
           + +  + +I++L R     S  L K ++ ++    +E++    N +I G       S+A+
Sbjct: 9   NLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAI 68

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             +G  +     P   +Y  ++  L   G+  EA  +  ++K +GL P    +N L+ GY
Sbjct: 69  GLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGY 128

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K+G+LK+A  V+  M R+ VLPD  TY+ LI      G+ + A  +  EME     P+ 
Sbjct: 129 CKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHV 188

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y+ ++ G  +     + F+++ EM+  GV+P+   YNV++  + K   + +A     +
Sbjct: 189 VTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRK 248

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M   G  PD +T+NTL + + K GR   A  + +EM  +G    + T N +++ L  + +
Sbjct: 249 MEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 308

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIY---GQSGRFDDAIE---------------- 566
            +D  +LL +   +G   + V+Y TL+  Y   G+S  +D+  E                
Sbjct: 309 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGG 368

Query: 567 -CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C  G +DQ+++    +   GL P     N++I  +  + +  +AF     M +   KPD
Sbjct: 369 LCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPD 428

Query: 626 VVTYTTLMKALIR---VDKFHKVFSSYL 650
           + T   L++ L     +DK  K+F +++
Sbjct: 429 LFTCNILVRGLCTEGMLDKALKLFKTWI 456



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 231/557 (41%), Gaps = 65/557 (11%)

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLSQRQR-LTP 193
           C   + +  A  ++  + KH  C+   + Y+ ++  L +  KL EA   LL  +   L P
Sbjct: 58  CCIENKLSEAIGLIGKM-KHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFP 116

Query: 194 --LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
              T+N L+S   +   L++A  ++  M ++    D   Y+ +I  L +  KID +   +
Sbjct: 117 NRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAF--R 174

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  E+E  K+       N +I G  +   + K    +   +G G+ P   TY  V+    
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV----- 366
             G+   A     +++ESG  P    +N L  GY K G L +A  ++ EM R G+     
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSV 294

Query: 367 ------------------------------LPDEHTYSLLIDAYANAGR---WESARIVL 393
                                           DE +Y  LI  Y   G+   W+      
Sbjct: 295 TLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWD------ 348

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM+     P+   Y  ++ G    G+  ++     E+  SG+ PD   YN +I  + + 
Sbjct: 349 -EMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCRE 407

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A    ++M+ +  +PD  T N L+      G  D+A +LF+    +G      T+
Sbjct: 408 GQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTF 467

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +I+ L E+ R+E+   LL  M  + L P+  T+  ++     +GR  +A E + G+ +
Sbjct: 468 NTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVE 527

Query: 574 QAVNAFRVMRTDGLK------------PSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           Q     + +  +  K            P+++A +  IN      +  +A  ++Q   + G
Sbjct: 528 QGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKG 587

Query: 622 LKPDVVTYTTLMKALIR 638
           +     TY +LM+ LI+
Sbjct: 588 IILHKSTYISLMEGLIK 604


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 230/491 (46%), Gaps = 22/491 (4%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           +D A  +   L + N C      Y+IL+ AL  + ++ +A  L       P  +TY  ++
Sbjct: 238 LDEAVQLFQELPEKNTCS-----YNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMV 292

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
                  +LE A+ L+S+M   G   + + Y+ VI  L    ++  ++  ++ +++    
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV--RVVEDMVMHG 350

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           + LD  +   V+ GF + GD + A  +    Q  GL+    TY A+I  L  +G   EAE
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            V +E+++ GL      Y  L+ GY K+G + +A  V ++M +  V P+  TY+ L D  
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G   +A  +L EM     + N F Y+ ++ G    G  ++  + + +M  +G++PD 
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
           + Y  +I    +   L  A +    ML +GI+P  +T+N L++     GR +  + L E 
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M E+   P TTTYN ++     ++  +    +   M +Q ++PN  TY  L+  + ++  
Sbjct: 591 MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARN 650

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
             +A   L   S+     FR+  +        + N+LI    + ++  EA  + + M++ 
Sbjct: 651 MKEA---LYFHSEMIEKGFRLTAS--------SYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 621 GL--KPDVVTY 629
            L  +PDV  +
Sbjct: 700 RLTAEPDVYNF 710



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 198/448 (44%), Gaps = 16/448 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+ A      ++ A  L  +M       D + Y +++      +++++++  KL  
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAI--KLLS 309

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +EL+      VI      G  S A+R +      G+    A +  V++     G
Sbjct: 310 EMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKG 369

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A   F+E+++ GL      Y AL+ G  + G LK+AE V+ EME  G+  D  TY+
Sbjct: 370 DLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYT 429

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LID Y   G+   A +V  +M      PN   Y+ +  G   +G+     ++L EM S 
Sbjct: 430 VLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E +   YN +I+   K   L  AM     M   G++PD  T+ T+I    +    DRA
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             L +EM ++G  P   TYN+++N      R E  KRLL  M  + + PN  TY +L+  
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y           C+E         ++ M +  + P+    N LI    + +   EA    
Sbjct: 610 Y-----------CIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF 642
             M E G +    +Y  L++ L +  KF
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKF 686



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 176/382 (46%), Gaps = 6/382 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +  ++S   R  DL  A N   +M++ G   D + Y+ +I  L R  ++  +  +++ +
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA--ERVLQ 414

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+E   +++D      +I G+ K G  ++A           ++P   TY A+   L   G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  E+   GL+     YN+L+ G  K G L+ A   + +M+ +G+ PD +TY+
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I A   +   + A  +L+EM     KP    Y+ ++ G+   G  +   ++L+ M   
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P+T  YN ++  +     +      +  MLS+ + P+  T+N LI  H K      A
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
                EM E+G+    ++YN +I LL +++++ + +RL   MR + L      Y   +D+
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDL 714

Query: 555 YGQSGRFDDAIECLEGLSDQAV 576
                  +D +E    L D+ V
Sbjct: 715 SFN----EDNLESTLALCDELV 732



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 25/359 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+SP   +  AV+  L       EA  +F+EL E      T +YN LLK     G +KDA
Sbjct: 221 GISPSPESCNAVLCRLPLD----EAVQLFQELPEKN----TCSYNILLKALCTAGRIKDA 272

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM      PD  TY +++  Y      E+A  +L EM     + N   Y+ ++A 
Sbjct: 273 HQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             D G+     +V+++M   GV  D   +  ++  F +   L  A   FD M   G+  D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  LI+   + G    AE + +EM+++G      TY ++I+   +  +  +   +  
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  + + PNVVTYT L D   + G    A E L             M + GL+ +    
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE-----------MCSKGLELNIFTY 498

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           NSLIN   +     +A   +  M E GLKPDV TYTT++ AL +   +D+ H +    L
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEML 557



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 163/386 (42%), Gaps = 15/386 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSW---LQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A ++ +++   C      DLA A  +W   +QK  L  +  + Y+ LI+ L R+ +L EA
Sbjct: 355 AAVFTTVMSGFCRKG---DLA-AARNWFDEMQKRGLA-ADGVTYTALINGLCRAGELKEA 409

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             + Q        +  +TY  LI    +   + +A  + +KM Q     + + Y+ +   
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L +   + ++   +L  E+    +EL+    N +I G  KAG+  +AMR +      GL 
Sbjct: 470 LCKQGDVCAA--NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I AL  S     A ++ +E+ + G+KP    YN L+ G+   G ++  + +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  M    + P+  TY+ L+  Y      +S   + K M      PN   Y+ ++ G+  
Sbjct: 588 LEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
               +       EM   G       YN +I    K      A   F++M  E +  +   
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQE 503
           +N  ID  F     +    L +E+ E
Sbjct: 708 YNFYIDLSFNEDNLESTLALCDELVE 733


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 198/430 (46%), Gaps = 13/430 (3%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL L ++M + G   D   Y+ ++    +  K D + +Q +++E+  +  + +    N +
Sbjct: 88  ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGK-DKAAVQ-IFEEMRNEGCKPNICTFNAL 145

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I      G  ++ M+     +    SP   T+  +++    +G   E   VF+E+K +G 
Sbjct: 146 IKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGF 205

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    +N L+  Y + G    A  V   M  +GV PD  +Y+ ++ A A  G W+ +  
Sbjct: 206 VPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEK 265

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           VL EM+    KPN   Y  +L  Y +  E +R   + +E+ S  +EP       ++    
Sbjct: 266 VLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNS 325

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K + L     AF  +   G  PD  T N ++  + +     +A E+ + M+  G+ P  T
Sbjct: 326 KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLT 385

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN ++ +      +E  + +L  + A+G+ P++++Y T++  Y ++GR  DA   L   
Sbjct: 386 TYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSE- 444

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                     MR  G  P  +  N+ I ++  D    EA  V+ YM ++G KP+  TY +
Sbjct: 445 ----------MRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNS 494

Query: 632 LMKALIRVDK 641
           ++    ++++
Sbjct: 495 IVDWYCKLNR 504



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 22/386 (5%)

Query: 259 DKIELDGQLLND-----------VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           D +EL  Q++             ++ GF KAG    A++     +  G  P   T+ A+I
Sbjct: 87  DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
               N G+  E   VFE++K     P    +N LL  + + G   +   V  EM+R+G +
Sbjct: 147 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 206

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  T++ LI +Y+  G ++ A  V K M  +   P+   Y+ +LA     G W+++ +V
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           L EMK    +P+   Y  ++  +     +    A  + + S  IEP  +   TL+  + K
Sbjct: 267 LAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSK 326

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           C      E  F E+++RG+ P  TT N M+++ G ++       +L  M+  G  P++ T
Sbjct: 327 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 386

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y +L+ +Y +S  F+ + E L           R +   G++P  ++ N++I A+  + R 
Sbjct: 387 YNSLMYMYSRSANFERSEEIL-----------REILAKGIRPDIISYNTVIYAYCRNGRM 435

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLM 633
            +A  VL  M+E+G  PD++TY T +
Sbjct: 436 RDASRVLSEMRESGPAPDIITYNTFI 461



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 24/316 (7%)

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  + ++M   G+ PD  TY+ L+  +  AG+ ++A  + +EM     KPN   ++ ++
Sbjct: 87  DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
             + +RG++    +V +++K+    PD   +N ++  FG+          F  M   G  
Sbjct: 147 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 206

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+NTLI  + +CG +D+A  +++ M E G  P  ++YN ++  L     W+  +++
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD----AIECLEGLSD--------------- 573
           L  M+     PN +TY +L+  Y      +     A E   G+ +               
Sbjct: 267 LAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSK 326

Query: 574 -----QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                +   AF  +R  G  P    LN++++ +G  Q  A+A  +L  MK  G  P + T
Sbjct: 327 CDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 386

Query: 629 YTTLMKALIRVDKFHK 644
           Y +LM    R   F +
Sbjct: 387 YNSLMYMYSRSANFER 402



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 141/303 (46%), Gaps = 8/303 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LIS+ +R    ++A+ +  +M + G + D  +Y+ V+ +L R      S  +K+  
Sbjct: 211 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQS--EKVLA 268

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---LSPKTATYAAVITALS 311
           E++  + + +      ++  +A   +     R   +A+ +    + P+      ++   S
Sbjct: 269 EMKDGRCKPNELTYCSLLHAYANGKEIE---RMCALAEEIYSGIIEPRAVLLKTLVLVNS 325

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                +E E  F EL++ G  P     NA++  Y +   +  A  ++  M+R G  P   
Sbjct: 326 KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLT 385

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L+  Y+ +  +E +  +L+E+     +P+   Y+ ++  Y   G  +   +VL EM
Sbjct: 386 TYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEM 445

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           + SG  PD   YN  I ++   +    A+     M+  G +P+  T+N+++D + K  R 
Sbjct: 446 RESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRR 505

Query: 492 DRA 494
           D A
Sbjct: 506 DEA 508



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 153/345 (44%), Gaps = 4/345 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N L+S   +N    +   +  +M++ G+  +   ++ +I S +R    D ++   +Y
Sbjct: 175 VTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM--AVY 232

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K +    +  D    N V+   A+ G   ++ + L   +     P   TY +++ A +N 
Sbjct: 233 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYAN- 291

Query: 314 GRTIEAE-AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           G+ IE   A+ EE+    ++PR      L+    K   L + E    E+ + G  PD  T
Sbjct: 292 GKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITT 351

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            + ++  Y        A  +L  M+     P+   Y+ ++  Y     ++R+ ++L+E+ 
Sbjct: 352 LNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREIL 411

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+ PD   YN +I  + +   +  A      M   G  PD IT+NT I  +     + 
Sbjct: 412 AKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFV 471

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            A ++   M + G  P  +TYN +++   +  R ++    + N+R
Sbjct: 472 EAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLR 516



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 46/191 (24%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+   ++M+ +GI+PD  T+ TL+    K G+   A ++FEEM                 
Sbjct: 88  ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEM----------------- 130

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                             R +G  PN+ T+  L+ ++G  G+F + ++  E +       
Sbjct: 131 ------------------RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI------- 165

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               +T    P  +  N+L++ FG++  D+E   V + MK  G  P+  T+ TL+ +  R
Sbjct: 166 ----KTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSR 221

Query: 639 VDKFHKVFSSY 649
              F +  + Y
Sbjct: 222 CGSFDQAMAVY 232


>gi|257051042|sp|Q9FFZ2.3|PP402_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g36300
          Length = 330

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 77/388 (19%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           + N  I  F + G+ ++AM  L     +G  P   +Y + I  L++  RT+EA+A+F E+
Sbjct: 13  MYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEV 72

Query: 327 KESGL--KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
               +      + YNAL+  Y+                                      
Sbjct: 73  VRFMIYGSYSVRLYNALVSRYL-------------------------------------- 94

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R E +  V+ EM+    + NSF+Y +I+  YRD G W++   +++E++  G+  D   YN
Sbjct: 95  RKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYN 154

Query: 445 VMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            +IDTFGKY  L   +   +++  S    P+  TWN+LI  H   G  D A ELF  +  
Sbjct: 155 SVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFTMI-- 212

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
                                 +ED+  L+G +++QG+ P+   + TL + Y Q      
Sbjct: 213 ----------------------FEDIGELVGKLKSQGVAPSANLFCTLANAYAQ------ 244

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN-GL 622
                +GL  Q V   ++M  +G++P+ + LN LINAFG   +  EA ++  ++KE   +
Sbjct: 245 -----QGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWI 299

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            PDVVTY+TLMKA  R  K+  V S YL
Sbjct: 300 HPDVVTYSTLMKAFTRAKKYEMVCSFYL 327



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 80/348 (22%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ---SLTRT----- 241
           R++   YN+ I    R  +  +A++L++++   G   D ++Y   I+   SL RT     
Sbjct: 8   RISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADA 67

Query: 242 -------------------NKIDSSLLQK-----LYKEIECDKIELDGQLLNDVIVGFAK 277
                              N + S  L+K     +  E++  K  L+  +   +I  +  
Sbjct: 68  LFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRD 127

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTK 336
            G   KA+  +   + +GL      Y +VI      G   E   V E+L+ S   +P  +
Sbjct: 128 NGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIR 187

Query: 337 AYNALLKGYVKMG-----------YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
            +N+L++ +   G             +D   +V +++  GV P  + +  L +AYA  G 
Sbjct: 188 TWNSLIRWHCHHGAVDMALELFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGL 247

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            +    VLK ME                                   + G+EP+    NV
Sbjct: 248 CKQTVKVLKMME-----------------------------------NEGIEPNLIMLNV 272

Query: 446 MIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYD 492
           +I+ FG       A++ +  +  +  I PD +T++TL+    +  +Y+
Sbjct: 273 LINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYE 320


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 212/455 (46%), Gaps = 28/455 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TY  ++    +   +E+AL +  +MR  G   D I  + +++      ++ ++L   L+
Sbjct: 263 FTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL--NLF 320

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE   D I     +   +I G  + G   KA        G GL P T   + V+  L N 
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  +A  +FEE+ +SGL P    YN L+  + +   L++A  +   M+++GV P  +TY
Sbjct: 381 RRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTY 439

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+  Y   G  + A  +  EM +   KPN   Y  ++ GY  + ++   + +L EMK 
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML----SEGIEPDTITWNTLIDCHFKCG 489
           +GV  + + YNV+I+      C+   +   D ML    SEG  P  +T+N++I+   K G
Sbjct: 500 NGVSCNDYTYNVLINGI----CMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A  ++++M+E+G  P   TY   I+        +   ++L ++R +GL P++V Y 
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++ + Q G    A++ L            ++  DGL P+ +  NSLI  +       E
Sbjct: 616 ALINGFCQEGNMSHALQLLV-----------ILLKDGLAPNTVVYNSLITGYKNLNMMKE 664

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                + M + G+  D  TYTTL      +D F K
Sbjct: 665 VSKFYESMIKGGIVADTSTYTTL------IDGFSK 693



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 225/510 (44%), Gaps = 62/510 (12%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+   AR    + AL L  +MR  GY  D   +  ++ +  +    + ++  +L+ E+  
Sbjct: 163 LLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAV--RLFDEMPG 220

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
            +I+ D ++    I    K GD  +A+R L   + VG      TY  ++  L  +GR  E
Sbjct: 221 AEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEE 280

Query: 319 AEAVFEELKESGLK-----------------------------------PRTKAYNALLK 343
           A  V +E++++G K                                   P    Y  L++
Sbjct: 281 ALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIR 340

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  ++G  + A  +  +M   G+LP     SL++    N  RW+ A  + +EM  S   P
Sbjct: 341 GCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADS-GLP 399

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           + F Y+ ++  +    + +    +   MK +GV+P  + YN ++  + K  C+  A+  +
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M  EG +P+ +T+ TL+  +     +D A  L +EM++ G      TYN++IN +   
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV 519

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------------- 566
           +R  +V  +L +  ++G +P ++TY ++++ + ++G    A                   
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579

Query: 567 -------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C  G SD A+     +R  GL+P  +A N+LIN F ++   + A  +L  + +
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +GL P+ V Y +L+     ++   +V   Y
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFY 669



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 208/481 (43%), Gaps = 20/481 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEA 182
           VP  + + +L   C        AY +   +    L  S +EL  S+++  L    +  +A
Sbjct: 329 VPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFEL--SLVLKGLLNDRRWKDA 386

Query: 183 FLLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
             L +    + L    TYN LI    +   L +ALNL  +M++ G       Y+ ++   
Sbjct: 387 VCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGY 446

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +   +D ++  KLY E+  +  + +      ++ G+    D   A   L   +  G+S 
Sbjct: 447 CKKGCMDEAV--KLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC 504

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I  +    R  E + + +     G  P    YN+++ G+VK G +  A  V 
Sbjct: 505 NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVY 564

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M   G+ P+  TY+  ID Y   G  + A  +L ++     +P+   Y+ ++ G+   
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQE 624

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G      Q+L  +   G+ P+T  YN +I  +   N +      ++ M+  GI  DT T+
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTY 684

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            TLID   K G    A EL+ EM  +GY P   T+  + + L      +  K+LL  MR 
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRR 744

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
             + PNV  Y  L++ Y +  +  +A      L D+ +N        G++P +   + L+
Sbjct: 745 LDVRPNVFIYNMLINGYLRDCKLQEAFR----LHDEMLNM-------GIQPDDTTYDILV 793

Query: 599 N 599
           +
Sbjct: 794 S 794



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 45/354 (12%)

Query: 139 SNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLT 192
           +    D AYA++  ++++ + C  Y   Y++LI+ +   +++ E        +S+    T
Sbjct: 483 AKKDFDNAYALLDEMKQNGVSCNDYT--YNVLINGICMVDRVCEVDGMLKSFMSEGFIPT 540

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +TYN++I+   +   +  A  +  +MR+ G   + I Y+  I    RT   D +L    
Sbjct: 541 MMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL---- 596

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
                        ++LNDV                    +  GL P    Y A+I     
Sbjct: 597 -------------KMLNDV--------------------RRRGLQPDIVAYNALINGFCQ 623

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G    A  +   L + GL P T  YN+L+ GY  +  +K+       M + G++ D  T
Sbjct: 624 EGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTST 683

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LID ++  G    A  +  EM      P++F ++ +  G    G+     ++L+EM+
Sbjct: 684 YTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMR 743

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
              V P+   YN++I+ + +   L  A    D ML+ GI+PD  T++ L+   F
Sbjct: 744 RLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 138/352 (39%), Gaps = 23/352 (6%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A   +  +   G+ P  K+   LL    +    KDA  +  EM   G   D   +  L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A    G  E A  +  EM  +   P+  +Y+  +      G+  R  ++L+EMK  G + 
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               Y  M+D   K   +  A+   D M   G + D I   TL+  +        A  LF
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +E  + G  P    Y ++I    +    +    L   M  QGLLP+    + ++      
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 559 GRFDDAIECLEGLSD-----------------------QAVNAFRVMRTDGLKPSNLALN 595
            R+ DA+   E ++D                       +A+N F  M+  G+KPS    N
Sbjct: 381 RRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           SL+  + +     EA  +   M   G KP+VVTY TLM+  I    F   ++
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 230/491 (46%), Gaps = 21/491 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
            +++ L+HA   +  +  A      + S+   +T +TY+ LIS   + +D + A NL  +
Sbjct: 287 FVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKE 346

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +    + + I YS +I +  ++  +D +  ++L +E+E D I+    + + ++ G+   
Sbjct: 347 AKTKLDNLNGIIYSNIIHAHCQSGNMDRA--EELVREMEEDGIDAPIDVYHSMMHGYTVV 404

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D  K +      +  G  P   +Y  +I      G+  +A A+ +E++  G+K   K Y
Sbjct: 405 QDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTY 464

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ G++ +    +A  +  +M +SG+ PD   Y+LL++A+   G  + A  + + M+ 
Sbjct: 465 SMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQK 524

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P++  +  I+ G+   G+ +R F  L  M+ SG  P    YN +I    + + +  
Sbjct: 525 ERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEK 584

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++  D+M   GI P+  T+  ++  +   G   +A E F +++E G       Y  ++ 
Sbjct: 585 AVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 644

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R +    +   M  Q +  N   Y  L+D + + G   D  E        A + 
Sbjct: 645 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG---DVWE--------AADL 693

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+ DG+ P+     S INA  +      A  V+Q M + GLKP+V T+TTL+K   R
Sbjct: 694 LKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAR 753

Query: 639 V---DKFHKVF 646
           V   D+  K F
Sbjct: 754 VSLPDRALKCF 764



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 227/494 (45%), Gaps = 34/494 (6%)

Query: 164 LLYSILIHA------LGRSEKLYEAFLLSQRQRLTPL-TYNALISACARNDDLEKALNLM 216
           ++YS +IHA      + R+E+L     + +     P+  Y++++       D +K L + 
Sbjct: 357 IIYSNIIHAHCQSGNMDRAEELVRE--MEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVF 414

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            ++++ G+    I+Y  +I    +  K+  ++   + KE+E   I+ + +  + +I GF 
Sbjct: 415 ERLKECGFKPTIISYGCLINLYVKVGKVPKAI--AISKEMESHGIKHNNKTYSMLINGFI 472

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              D + A          GL P  A Y  ++ A    G    A  +FE +++  ++P  +
Sbjct: 473 HLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNR 532

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            +  +++G+   G +K A   +  M RSG  P   TY+ LI       + E A  VL +M
Sbjct: 533 TFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKM 592

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            ++   PN   Y+ I+ GY   G+  + F+   ++K SG++ D + Y  ++    K   +
Sbjct: 593 SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 652

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+A    M  + I  +T  +N LID   + G    A +L ++M+E G  P   T+   
Sbjct: 653 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSY 712

Query: 517 INLL---GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           IN     G+ +R E+V + + ++   GL PNV T+TTL+  + +             L D
Sbjct: 713 INACCKAGDMQRAENVIQEMADV---GLKPNVKTFTTLIKGWARV-----------SLPD 758

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVV 627
           +A+  F  M++ GLKP   A + L+ +        E       F+V + M EN L  D+ 
Sbjct: 759 RALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGIFSVCREMFENDLTVDLR 818

Query: 628 TYTTLMKALIRVDK 641
           T     K L ++++
Sbjct: 819 TAVHWSKWLHKIER 832



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++   +  G    A A FE ++  G++P    + +L+  Y   G ++ A   
Sbjct: 249 PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSC 308

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS+LI  Y      +SA  + KE +      N  IYS I+  +  
Sbjct: 309 VEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQ 368

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G   R  ++++EM+  G++     Y+ M+  +         +  F+R+   G +P  I+
Sbjct: 369 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIIS 428

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A  + +EM+  G      TY+++IN       + +   +  +M 
Sbjct: 429 YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  LV+ +           C  G  D+A+  F  M+ + ++PSN     +
Sbjct: 489 KSGLQPDRAIYNLLVEAF-----------CKMGNMDRAIRIFERMQKERMQPSNRTFRPI 537

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  F        AF  L  M+ +G  P V+TY  L+  L+R  +  K  S
Sbjct: 538 IEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVS 587



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 186/459 (40%), Gaps = 59/459 (12%)

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D    +  ++ +    IE +  +   ++  +A AGD   A+  +   +  G+     TY+
Sbjct: 266 DKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYS 325

Query: 305 AVI--------------------TALSN---------------SGRTIEAEAVFEELKES 329
            +I                    T L N               SG    AE +  E++E 
Sbjct: 326 ILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEED 385

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+      Y++++ GY  +   K    V   ++  G  P   +Y  LI+ Y   G+   A
Sbjct: 386 GIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKA 445

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + KEME    K N+  YS ++ G+    ++   F + ++M  SG++PD   YN++++ 
Sbjct: 446 IAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEA 505

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F K   +  A+  F+RM  E ++P   T+  +I+     G   RA +  + M+  G  P 
Sbjct: 506 FCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPT 565

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TYN +I+ L  + + E    +L  M   G+ PN  TYT ++  Y  SG    A E   
Sbjct: 566 VMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFT 625

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C  G    A+   R M    +  +    N LI+ +    
Sbjct: 626 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 685

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              EA  +L+ MKE+G+ P++ T+T+ + A  +     +
Sbjct: 686 DVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQR 724



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 28/254 (11%)

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +WQ      + +     +P    + +M+  + K    HHA A F+ M + GIEP+   + 
Sbjct: 235 DWQAVVSAFERIP----KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFT 290

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +L+  +   G    A    EEM+  G      TY+I+I+  G+    +    L    + +
Sbjct: 291 SLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTK 350

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------------------- 578
               N + Y+ ++  + QSG  D A E +  + +  ++A                     
Sbjct: 351 LDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKC 410

Query: 579 ---FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  ++  G KP+ ++   LIN + +  +  +A A+ + M+ +G+K +  TY+ L+  
Sbjct: 411 LIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLING 470

Query: 636 LIRVDKFHKVFSSY 649
            I +  F   FS +
Sbjct: 471 FIHLHDFANAFSIF 484


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 14/332 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G   E     E +   G  P   A  AL++ + K+G  K+A  ++  +E SG + D
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             +Y++LI  Y  +G  E A  VL  M VS   PN+  Y  +L    DRG+ ++  QVL 
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRMGVS---PNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
               S   PD     V+ID   K + +  AM  F+ M ++G +PD +T+N LI    K G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A    +++   G  P   ++N+++  L    RW D  +LL  M  +G LP+VVT+ 
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++             C +GL  +A+N   +M   G  P++ + N LI  F   +    
Sbjct: 326 ILINFL-----------CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDR 374

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A   L+ M   G  PD+VTY  L+ AL +  K
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 29/456 (6%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN +LE+    +  M   G   D I  + +I+   +  +  ++   ++   +E     +D
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNA--SQIMGILEESGAVID 148

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I G+ K+G+  +A+R L     +G+SP  ATY AV+ +L + G+  +A  V  
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVL---DRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
              +S   P       L+    K   +  A  + +EM   G  PD  TY++LI  +   G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A   LK++     +P+   ++ IL      G W    ++L  M   G  P    +N
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I+   +   L  A+   + M   G  P++ ++N LI         DRA E  E M  R
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G +P   TYNI++  L +  + +D   +L  + ++G  P++++Y T++D   + G+ + A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 565 IECLE-------------------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLINA 600
           +E LE                   GLS      +A+  F  ++   ++P+    NS+I  
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             + Q+ + A   L  M   G KP   TYTTL+K +
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGI 541



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 180/401 (44%), Gaps = 4/401 (0%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           Y++LI    +S ++ EA  +  R  ++P   TY+A++ +      L++A+ ++ +  Q  
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK 211

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
            + D +  +++I +  + + +  ++  KL+ E+     + D    N +I GF K G   +
Sbjct: 212 CYPDVVTCTVLIDATCKESGVGQAM--KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+RFL      G  P   ++  ++ +L + GR ++A  +   +   G  P    +N L+ 
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
              + G L  A  V+  M + G  P+  +++ LI  + N    + A   L+ M      P
Sbjct: 330 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYP 389

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ +L      G+      +L ++ S G  P    YN +ID   K      A+   
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  +G++PD IT  +++    + G+   A + F  ++     P    YN +I  L + 
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKS 509

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           ++       L +M A+G  P   TYTTL+      G  +DA
Sbjct: 510 QQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDA 550



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 9/212 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQ 187
           ++ L++  C+    ID A   +  +     CY   + Y+IL+ AL +  K+ +A  +LSQ
Sbjct: 359 FNPLIQGFCNGKG-IDRAIEYLEIMVSRG-CYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +  +P  ++YN +I    +    E A+ L+ +M   G   D I  + V+  L+R  K
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  ++  K +  ++   I  +  + N +I G  K+   S A+ FL      G  P  ATY
Sbjct: 477 VREAM--KFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATY 534

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
             +I  ++  G   +A  +  EL   GL  R+
Sbjct: 535 TTLIKGITYEGLAEDASKLSNELYSRGLVKRS 566


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 216/452 (47%), Gaps = 18/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS-- 247
           RL    Y++L+ + A+ D    A     +M  DG+    I+Y  ++ +L +    +++  
Sbjct: 157 RLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAV 306
            + K+ K        LD  +   +++GF +  +   A++ F  M++ V  +P + +Y+ +
Sbjct: 217 FMSKILK----IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L   GR  EA  + +++ E G +P T+ Y  L+K     G +  A  +  EM   G 
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+ HTY++LID     G+ E A  V ++M      P+   Y+ ++ GY   G     F+
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L  M+    +P+   +N +++   +    + A+    RML  G+ PD +++N LID   
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  + A +L   M      P   T+  +IN   +Q + +     LG M  +G+  + V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           T TTL+D   + G+  DA+  LE L        R++ T    P   +LN +++   +  +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLV-----KMRILTT----PH--SLNVILDMLSKGCK 561

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             E  A+L  + + GL P VVTYTTL+  LIR
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 230/525 (43%), Gaps = 56/525 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS L+ +L + +  + A++  +R       +  + Y  +++A  +N   E A   MSK+ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 221 QDGYHCD-FINYSLVIQSLTRTNKIDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + G+  D  I  SL++      N  D+  +   + KE+ C    +   +L   I G  + 
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL---IHGLCEV 279

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A          G  P T TY  +I AL + G   +A  +F+E+   G KP    Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+ G  + G +++A  V  +M +  + P   TY+ LI+ Y   GR   A  +L  ME 
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN   ++ ++ G    G+  +   +LK M  +G+ PD   YNV+ID   +   ++ 
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459

Query: 459 A------MAAFD-----------------------------RMLSEGIEPDTITWNTLID 483
           A      M  FD                              ML +GI  D +T  TLID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G+   A  + E + +        + N+++++L +  + ++   +LG +   GL+P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +VVTYTTLVD   +SG    +   LE           +M+  G  P+      +IN   +
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILE-----------LMKLSGCLPNVYPYTIIINGLCQ 628

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
             R  EA  +L  M+++G+ P+ VTYT ++K  +   K  +   +
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 22/500 (4%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
           D+  ++N L +N  +E+A    S          K+ +    + + +  SLL   C   + 
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMS----------KILKIGFVLDSHIGTSLLLGFCRGLNL 246

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
            D A  V   + K   C    + YSILIH L    +L EAF L  +      + +  TY 
Sbjct: 247 RD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE 255
            LI A      ++KA NL  +M   G   +   Y+++I  L R  KI+  + + +K+ K 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK- 364

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
              D+I       N +I G+ K G    A   L + +     P   T+  ++  L   G+
Sbjct: 365 ---DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  + + + ++GL P   +YN L+ G  + G++  A  ++S M    + PD  T++ 
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+A+   G+ + A   L  M       +    + ++ G    G+ +    +L+ +    
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +    H  NV++D   K   +   +A   ++   G+ P  +T+ TL+D   + G    + 
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            + E M+  G  P    Y I+IN L +  R E+ ++LL  M+  G+ PN VTYT +V  Y
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 556 GQSGRFDDAIECLEGLSDQA 575
             +G+ D A+E +  + ++ 
Sbjct: 662 VNNGKLDRALETVRAMVERG 681



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 21/389 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +  L+K LC     ID A+ +   +     C      Y++LI  L R  K+ EA  + ++
Sbjct: 304 YTVLIKALCD-RGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
               R+ P  +TYNALI+   ++  +  A  L++ M +     +   ++ +++ L R  K
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDV------IVGFAKAGDASKAMRFLGMAQGVGLS 297
                    YK +   K  LD  L  D+      I G  + G  + A + L       + 
Sbjct: 422 P--------YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   T+ A+I A    G+   A A    +   G+         L+ G  K+G  +DA F+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  + +  +L   H+ ++++D  +   + +    +L ++      P+   Y+ ++ G   
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+   +F++L+ MK SG  P+ + Y ++I+   ++  +  A      M   G+ P+ +T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +  ++  +   G+ DRA E    M ERGY
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGY 682



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 9/359 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +  L+  LC  +  I+ A  V   + K  + +   + Y+ LI+     GR    +E   +
Sbjct: 339 YTVLIDGLCR-DGKIEEANGVCRKMVKDRI-FPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +++   P   T+N L+    R     KA++L+ +M  +G   D ++Y+++I  L R   
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++++   KL   + C  IE D      +I  F K G A  A  FLG+    G+S    T 
Sbjct: 457 MNTA--YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  +   G+T +A  + E L +  +     + N +L    K   +K+   ++ ++ +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++P   TY+ L+D    +G    +  +L+ M++S   PN + Y+ I+ G    G  + 
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++L  M+ SGV P+   Y VM+  +     L  A+     M+  G E +   +++L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 143/332 (43%), Gaps = 39/332 (11%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           R  P+ + ++ L N    +  +  A+ +++ ++K   C      ++ L+  L R  K Y+
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYK 424

Query: 182 AFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A  L +R     L+P  ++YN LI    R   +  A  L+S M       D + ++ +I 
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 237 SLTRTNKIDSS---LLQKLYKEIECDKIE----LDGQL---------------------- 267
           +  +  K D +   L   L K I  D++     +DG                        
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 268 ----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
               LN ++   +K     + +  LG    +GL P   TY  ++  L  SG    +  + 
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E +K SG  P    Y  ++ G  + G +++AE ++S M+ SGV P+  TY++++  Y N 
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
           G+ + A   ++ M     + N  IYS +L G+
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGF 696



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P  L  + + N        D+A A +  + +  +    E+  + LI  + +  K  +A  
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD-EVTGTTLIDGVCKVGKTRDALF 532

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               L+  R   TP + N ++   ++   +++ L ++ K+ + G     + Y+ ++  L 
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGV 294
           R+  I  S     ++ +E   ++L G L N      +I G  + G   +A + L   Q  
Sbjct: 593 RSGDITGS-----FRILE--LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           G+SP   TY  ++    N+G+   A      + E G +   + Y++LL+G+V
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +  M+  G+      Y  ++N L +    E  +  +  +   G + +    T+L+  + +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                DA++  + +S +   A          P++++ + LI+   E  R  EAF +   M
Sbjct: 243 GLNLRDALKVFDVMSKEVTCA----------PNSVSYSILIHGLCEVGRLEEAFGLKDQM 292

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E G +P   TYT L+KAL       K F+ +
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 217/477 (45%), Gaps = 18/477 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           YS+L+ A G+ +     +LL + +    +    +Y   I    +    E+A  ++ KM  
Sbjct: 220 YSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMED 279

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G   D +  +++IQ L    ++  +  + ++ +++    + D      ++      GD+
Sbjct: 280 EGCKPDVVTNTVLIQILCDAGRVSDA--KDVFWKMKASDQKPDRVTYITLLDKCGDNGDS 337

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
              +      +  G +     Y AV+ AL   GR  EA  VF+++K+ G++P+  +YN+L
Sbjct: 338 RSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSL 397

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G++K   L  A  + + M   G  P+ +TY L I+ Y  +G    A    + M+    
Sbjct: 398 ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGI 457

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+    + +L      G      +V  E+KS GV PD   Y +MI    K +    AM 
Sbjct: 458 VPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMK 517

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M+     PD +  N+LID  +K GR + A ++F E++E    P   TYN ++  LG
Sbjct: 518 VFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLG 577

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            + + ++V  LL  M +    PN++TY T++D             C  G  + A+     
Sbjct: 578 REGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCL-----------CKNGEVNYALGMLYN 626

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           M   G  P   + N+ ++   ++ R  EAF +   MK+  L PD  T  T++ + ++
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVK 682



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 139/570 (24%), Positives = 248/570 (43%), Gaps = 58/570 (10%)

Query: 122  RAVPAPLW-HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
            R VP  L  +SL+  L  +    + A+ +   L++ NL  + +  Y+ L+  LGR  K+ 
Sbjct: 526  RCVPDVLAVNSLIDTLYKAGRGNE-AWKIFHELKEMNLDPT-DCTYNTLLAGLGREGKVK 583

Query: 181  EAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            E   L +           +TYN ++    +N ++  AL ++  M   G   D  +Y+  +
Sbjct: 584  EVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTAL 643

Query: 236  QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL------- 288
              L + +++  +   +++ +++   +  D   L  ++  F K G  ++A+  L       
Sbjct: 644  HGLVKEDRLTEAF--RIFCQMK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQP 700

Query: 289  --------------------GMAQGVGLSPKTAT---------YAAVITALSNSGRTIEA 319
                                GM + +  +   A           + +I  L  S + +EA
Sbjct: 701  GSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEA 760

Query: 320  EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
              + ++ +  G+  +T +YNAL+ G V    +  AE + SEM+R G  PDE TY+L++DA
Sbjct: 761  HELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDA 820

Query: 380  YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
               + R E    V KEM     +     Y+ I++G            +  ++ S G  P 
Sbjct: 821  MGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPT 880

Query: 440  THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
               Y  ++D   K   +  A   FD ML  G +P+   +N L++ +   G  ++  ELF+
Sbjct: 881  PCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQ 940

Query: 500  EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             M ++G  P   +Y ++I  L    R  D       +   GL P+++TY  L+   G+SG
Sbjct: 941  NMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSG 1000

Query: 560  RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            R            ++AV+ F  M   G+ P+    NSLI   G++ + AEA  + + + +
Sbjct: 1001 RL-----------EEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLK 1049

Query: 620  NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            NG KP+V TY  L+            F+SY
Sbjct: 1050 NGWKPNVFTYNALIGGYSVSGSTDNAFASY 1079



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 186/412 (45%), Gaps = 29/412 (7%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           I L+    N +I    K+G   +AM    +    G+ P   TY+ ++ A     R +E  
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGK--RDVETV 235

Query: 321 A-VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +  E+++ G+KP   +Y   ++   + G  ++A  ++ +ME  G  PD  T ++LI  
Sbjct: 236 VWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQI 295

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
             +AGR   A+ V  +M+ S  KP+   Y  +L    D G+ +   ++   MK+ G   +
Sbjct: 296 LCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDN 355

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              Y  ++D   +   +  A   FD+M  +GIEP   ++N+LI    K  R + A ELF 
Sbjct: 356 VVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFN 415

Query: 500 EMQERGYFPCTTTYNIMINLLGEQ-ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            M   G  P   TY + IN  G+  E  + +KR    M+++G++P+VV    ++    +S
Sbjct: 416 HMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRY-ELMKSKGIVPDVVAGNAVLYSLAKS 474

Query: 559 GRFDDA----------------------IECLEGLS--DQAVNAFRVMRTDGLKPSNLAL 594
           GR   A                      I+C    S  D+A+  F  M      P  LA+
Sbjct: 475 GRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAV 534

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           NSLI+   +  R  EA+ +   +KE  L P   TY TL+  L R  K  +V 
Sbjct: 535 NSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVM 586



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 220/504 (43%), Gaps = 23/504 (4%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           Y+Y  L   L+ + G   +  E + +     + P   TY+ L+ A  + D +E  + L+ 
Sbjct: 183 YTYNGLIYFLVKS-GYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-VETVVWLLR 240

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M   G   +  +Y++ I+ L +  + + +  +LQK+  E  C    +   +L  ++   
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDE-GCKPDVVTNTVLIQIL--- 296

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
             AG  S A       +     P   TY  ++    ++G +     ++  +K  G     
Sbjct: 297 CDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNV 356

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AY A++    ++G + +A  V  +M++ G+ P +++Y+ LI  +  A R   A  +   
Sbjct: 357 VAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNH 416

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M +    PN + Y   +  Y   GE  +  +  + MKS G+ PD    N ++ +  K   
Sbjct: 417 MNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGR 476

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A   F  + S G+ PD IT+  +I C  K    D A ++F EM E    P     N 
Sbjct: 477 LGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNS 536

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+ L +  R  +  ++   ++   L P   TY TL+   G+ G+  + +  LE      
Sbjct: 537 LIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLE------ 590

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M ++   P+ +  N++++   ++     A  +L  M   G  PD+ +Y T +  
Sbjct: 591 -----EMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHG 645

Query: 636 LIRVDKFHKVFSSYLFFNIYKMLS 659
           L++ D+  + F   +F  + K+L+
Sbjct: 646 LVKEDRLTEAFR--IFCQMKKVLA 667



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 168/363 (46%), Gaps = 7/363 (1%)

Query: 163  ELLYSILIHALGRSEKLYEAFLLSQR-----QRLTPLTYNALISACARNDDLEKALNLMS 217
            +   S LI  L +S+K  EA  L ++       L   +YNALI      + ++ A  L S
Sbjct: 741  DFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFS 800

Query: 218  KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +M++ G   D   Y+L++ ++ ++ +I+  L  K+ KE+ C   E      N +I G  K
Sbjct: 801  EMKRLGCDPDEFTYNLILDAMGKSMRIEDML--KVQKEMHCKGYESTYVTYNTIISGLVK 858

Query: 278  AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            +    +AM         G SP   TY  ++  L   G+  +AE +F+E+ + G KP    
Sbjct: 859  SKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAI 918

Query: 338  YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
            YN LL GY   G  +    +   M   G+ PD  +Y++LI A   AGR   +    +++ 
Sbjct: 919  YNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLT 978

Query: 398  VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                +P+   Y+ ++ G    G  +    +  +M+ SG+ P+ + YN +I   GK     
Sbjct: 979  ELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAA 1038

Query: 458  HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             A   ++ +L  G +P+  T+N LI  +   G  D A   + +M   G  P ++TY  + 
Sbjct: 1039 EAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLP 1098

Query: 518  NLL 520
            N L
Sbjct: 1099 NQL 1101



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 56/392 (14%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  +  +L   G    A      +KE+G+   +  YN L+   VK GY ++A  V  
Sbjct: 147 VGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYK 206

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G++P   TYS+L+ A+      E+   +L+EME    KPN + Y+  +      G
Sbjct: 207 VMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAG 265

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
            ++  +++L++M+  G +PD     V+I        +  A   F +M +   +PD +T+ 
Sbjct: 266 RFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYI 325

Query: 480 TLIDCHFKC--------------------------------------GRYDRAEELFEEM 501
           TL+D   KC                                      GR D A ++F++M
Sbjct: 326 TLLD---KCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQM 382

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +++G  P   +YN +I+   + +R      L  +M   G  PN  TY   ++ YG+SG  
Sbjct: 383 KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGE- 441

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                     S +A+  + +M++ G+ P  +A N+++ +  +  R   A  V   +K  G
Sbjct: 442 ----------SLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIG 491

Query: 622 LKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
           + PD +TYT ++K   +    D+  KVFS  +
Sbjct: 492 VCPDNITYTMMIKCCSKASNADEAMKVFSEMI 523



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 13/377 (3%)

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           CD+ E      N V +  + A D ++A++ F  +AQ   +   T +   ++  +   GR 
Sbjct: 69  CDEREGRPGAQNVVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRV 128

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +   VF+ ++   +K     +  + +     G L+ A   +  M+ +G++ + +TY+ L
Sbjct: 129 RDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGL 188

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I     +G    A  V K M      P+   YS ++  +  R + +    +L+EM+  GV
Sbjct: 189 IYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGV 247

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+ + Y + I   G+      A     +M  EG +PD +T   LI      GR   A++
Sbjct: 248 KPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKD 307

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +F +M+     P   TY  +++  G+      V  +   M+A G   NVV YT +VD   
Sbjct: 308 VFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALC 367

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           Q GR            D+A + F  M+  G++P   + NSLI+ F +  R   A  +  +
Sbjct: 368 QVGRV-----------DEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNH 416

Query: 617 MKENGLKPDVVTYTTLM 633
           M  +G  P+  TY   +
Sbjct: 417 MNIHGPTPNGYTYVLFI 433



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 158/342 (46%), Gaps = 19/342 (5%)

Query: 318 EAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           EA  +F+ + +   +PR    T++ N +L+     G ++D   V   M+R  V  +  T+
Sbjct: 94  EALQLFKSVAQ---QPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             +  +    G   SA + L  M+ +    NS+ Y+ ++      G  +   +V K M +
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P    Y+V++  FGK + +   +     M   G++P+  ++   I    + GR++ 
Sbjct: 211 DGIVPSVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++ ++M++ G  P   T  ++I +L +  R  D K +   M+A    P+ VTY TL+D
Sbjct: 270 AYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLD 329

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
             G +G     IE            +  M+ DG   + +A  ++++A  +  R  EA  V
Sbjct: 330 KCGDNGDSRSVIE-----------IWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDV 378

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
              MK+ G++P   +Y +L+   ++ D+ +     +   NI+
Sbjct: 379 FDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIH 420


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 205/452 (45%), Gaps = 21/452 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T + LI+       +  + +++ K+ + GY  + I  + +++ L    ++  SL    +
Sbjct: 168 VTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL--HFH 225

Query: 254 KEIECDKIELD----GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            ++     +++    G LLN    G  K G+   A++ L M +     P    Y  +I  
Sbjct: 226 DKVVAQGFQMNQVSYGTLLN----GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDG 281

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L       EA   + E+   G+ P    Y+ L+ G+   G L  A  +++EM    + PD
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPD 341

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            +TY++LIDA    G+ + A+ +L  M     KPN   YS ++ GY   GE     Q+  
Sbjct: 342 VYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFH 401

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M  + V P    YN+MI+   K   +  AM     ML + + P+T+T+N+LID   K G
Sbjct: 402 AMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A +L +E+  RG      TY  +++ L + +  +    L   M+ +G+ PN  TYT
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+D   +  R  +A +            F+ +   G        N +I    ++    E
Sbjct: 522 ALIDGLCKGARLKNAQK-----------LFQHILVKGCCIDVYTYNVMIGGLCKEGMLDE 570

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A A+   M++NG  PD VT+  ++++L   D+
Sbjct: 571 ALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDE 602



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 193/427 (45%), Gaps = 18/427 (4%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I +  ++ SL +     +++   L K++E   IE D   L+ +I  F   G  + +   
Sbjct: 132 IIEFGKILGSLVKMKHFPTAI--SLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T     ++  L   G   ++    +++   G +    +Y  LL G  K
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  + A  ++  +E     PD   Y+ +ID          A     EM      P+   
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           YS ++ G+   G+    F +L EM    + PD + Y ++ID   K   L  A      M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            EG++P+ +T++TL+D +   G    A+++F  M +    P   +YNIMIN L + +  +
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   LL  M  + ++PN VTY +L+D   +SGR   A++ ++ L  +             
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG------------ 477

Query: 588 KPSN-LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFH 643
           +P++ +   SL++   ++Q   +A A+   MKE G++P+  TYT L+  L    R+    
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537

Query: 644 KVFSSYL 650
           K+F   L
Sbjct: 538 KLFQHIL 544



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 161/377 (42%), Gaps = 59/377 (15%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +  +L   VKM +   A  +  +ME  G+ PD  T S+LI+ + + G+   +  V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +PN+ I + ++ G   +GE +++     ++ + G + +   Y  +++   K
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP---- 508
                 A+     +      PD + +NT+ID   K    + A + + EM  RG FP    
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 509 --------CTT-----------------------TYNIMINLLGEQERWEDVKRLLGNMR 537
                   C                         TY I+I+ L ++ + ++ K LLG M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------C-----LEGLS-----D 573
            +G+ PNVVTY+TL+D Y   G   +A +              C     + GL      D
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A+N  R M    + P+ +  NSLI+   +  R   A  +++ +   G   DV+TYT+L+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 634 KALIRVDKFHKVFSSYL 650
             L +     K  + ++
Sbjct: 490 DGLCKNQNLDKAIALFM 506


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 231/498 (46%), Gaps = 26/498 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G++ +  EA  ++ + +R+    + +TYN+LIS+  ++  LE+A+ L  
Sbjct: 278 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 337

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + Y+ +I  L R  KID+++++  Y E+  +  + +    N +I     
Sbjct: 338 EMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVE--YDEMVRNGCKPNLCTYNALIKMHGV 395

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   + M      +  G  P   T+  ++     +G   E   VF+E+K++G  P    
Sbjct: 396 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  GRWE A  +  EME
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+ + YS +L  Y +     +   +  ++ S  +EP       ++    K N L 
Sbjct: 516 ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 575

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  AF  +  +    D    N ++  + K     + E++   M+E        TYN ++
Sbjct: 576 EAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLM 635

Query: 518 NL---LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++   LG+ E+ E++   L  +++ G+ P+  +Y T++  YG+ G+             +
Sbjct: 636 HMYSRLGDCEKCENI---LTEIKSSGVRPDRYSYNTVIYAYGRKGQM-----------KE 681

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   F  M+  GLKP  +  N  + ++  +    EA  +++YM   G KP+  TY ++++
Sbjct: 682 ASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVE 741

Query: 635 ALIRVDKF--HKVFSSYL 650
              R  K    K+F S L
Sbjct: 742 GYCRNGKLTDAKIFVSNL 759



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 220/504 (43%), Gaps = 34/504 (6%)

Query: 170 IHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           I  + R+ +L EA  LL          Y AL+SA +R      A+ +  +M   G     
Sbjct: 148 IRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAI 207

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y++V+   ++   +    + +L   ++   +  D    N +I    +     +A +  
Sbjct: 208 VTYNVVLHVYSKM-AVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVF 266

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              +  G  P   T+ +++     + R  EA  V +E++  G  P    YN+L+  YVK 
Sbjct: 267 DEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKD 326

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G L+ A  +  EME  G+ PD  TY+ LI     AG+ ++A +   EM  +  KPN   Y
Sbjct: 327 GLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTY 386

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++  +  RG++     V  E +S+G  PD   +N ++  FG+          F  M  
Sbjct: 387 NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 446

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G  P+  T+ +LI  + +CG +D A ++++ M E G +P  +TYN +++ L    RWE 
Sbjct: 447 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQ 506

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--------------- 573
            ++L   M  +   P+  +Y++L+  Y  + R D     ++ LSD               
Sbjct: 507 AEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDK----MKALSDDIYSERIEPHNWLVK 562

Query: 574 -------------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                        +A  AF  +R          LN++++ +G+++   +   +L  MKE+
Sbjct: 563 TLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKES 622

Query: 621 GLKPDVVTYTTLMKALIRVDKFHK 644
            +     TY +LM    R+    K
Sbjct: 623 AINLSAATYNSLMHMYSRLGDCEK 646



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 7/247 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTPLTY--NALISACARNDDLEKAL 213
           C   E  YS L+HA   +++L +   LS     +R+ P  +    L+   ++ ++L +A 
Sbjct: 519 CKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 578

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
               ++RQ     D IN    + S+   N++   + +K+   ++   I L     N ++ 
Sbjct: 579 KAFLELRQKRCSLD-INVLNAMVSIYGKNRMVRKV-EKILSLMKESAINLSAATYNSLMH 636

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            +++ GD  K    L   +  G+ P   +Y  VI A    G+  EA  +F E+K SGLKP
Sbjct: 637 MYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN  +K YV     ++A  +V  M   G  P+E TY+ +++ Y   G+   A+I +
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFV 756

Query: 394 KEMEVSH 400
             +   H
Sbjct: 757 SNLPQLH 763


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 251/563 (44%), Gaps = 32/563 (5%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           +T L++ L ++ + ++A AL            K+A++  A     + +L+  LC +    
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQ----------KMADAGCAPNVVTYTALIDGLCKARRPH 62

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
           D    V   L+    C    + Y+ LIH L  + ++ +A L+ Q   R    P  +TY+ 
Sbjct: 63  DAIQTVKRMLRSG--CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IE 257
           L+    R   L++A  L+ +M   G  C+ + Y   I          S    +   E IE
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
             +I  D    N  I G  KAG   K +  L      G+ P   T+ ++I+ L  + R  
Sbjct: 181 SGRIP-DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME--RSGVLPDEHTYSL 375
           +A  VF+ + E G  P +  Y+ +L    +   L   + V+  M+  ++G + + +T++ 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            I A   +G++  A+ +L  M  S + PN   Y+ ++ G    G     +++ ++M  SG
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 359

Query: 436 V-EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPDTITWNTLIDCHFKCGRYDR 493
             +PD  F+N +I  F K   L  A      M ++ I  PD +T+NTLID   K G   +
Sbjct: 360 CCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQ 419

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+ L +EMQ  G  P   TY  +IN   +   +E+ + L   M A+G  P+++TY T++ 
Sbjct: 420 AKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLS 479

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + ++G    A    EG+  Q  N     +T    P  +    LI+ +   +   +   +
Sbjct: 480 AFSKAGMMSKA----EGVYQQLKN-----KTSYCSPDAITYRILIDGYCRAEDTEQGLTL 530

Query: 614 LQYMKENGLKPDVVTYTTLMKAL 636
           LQ M   G   D  TY  L+  L
Sbjct: 531 LQEMTARGWSCDSYTYNVLIAKL 553



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 188/392 (47%), Gaps = 18/392 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQ 187
           + S++  LC +N  ID A+ V   + +   C    L YSI++  L R+ +L     +L  
Sbjct: 225 FCSIISGLCKANR-IDDAFQVFKGMLERG-CVPDSLTYSIMLDNLSRANRLDTVDEVLEH 282

Query: 188 RQRLTP------LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
            Q +         T+NA I A  R+     A N++  M + G   + ++Y+ VI  L ++
Sbjct: 283 MQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS 342

Query: 242 NKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS-P 298
             +D +  L +K+     C     D    N +I GF KAG  S+A + L   +   +  P
Sbjct: 343 GNVDDAWKLSRKMLDSGCCKP---DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVP 399

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I   S  G   +A+ + +E++  G KP    Y AL+ GY K G  ++AE + 
Sbjct: 400 DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLF 459

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME--VSHAKPNSFIYSRILAGYR 416
            EM   G  PD  TY+ ++ A++ AG    A  V ++++   S+  P++  Y  ++ GY 
Sbjct: 460 DEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYC 519

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL-HHAMAAFDRMLSEGIEPDT 475
              + ++   +L+EM + G   D++ YNV+I    +   +   A+A + +ML +   P  
Sbjct: 520 RAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSA 579

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             +N+L+    + G  + A  + +EM E+G+ 
Sbjct: 580 SIFNSLVRLFLRTGDVNSARSMVQEMNEKGHL 611



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 212/523 (40%), Gaps = 87/523 (16%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMR--------------------------------- 220
           +TY  LI    ++ DL+ A  L+ KM                                  
Sbjct: 11  VTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKR 70

Query: 221 --QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKE--------------IECDKIE 262
             + G   D + Y+ +I  L   N++D +  +LQ+L +                 C +  
Sbjct: 71  MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRR 130

Query: 263 LD------------GQLLN-----DVIVGFAKAGDASKAMRFLGMAQGV--GLSPKTATY 303
           LD            G + N     D I GF +A   S         + +  G  P   TY
Sbjct: 131 LDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTY 190

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
              I+ L  +G+  +   + EE+   G+ P    + +++ G  K   + DA  V   M  
Sbjct: 191 NTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLE 250

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR--ILAGYRDRGEW 421
            G +PD  TYS+++D  + A R ++   VL+ M+   A     +Y+    +      G++
Sbjct: 251 RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKF 310

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNT 480
                +L  M  SG  P+   YN +ID   K   +  A     +ML  G  +PD I +NT
Sbjct: 311 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNT 370

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           LI    K GR  +A +L  EM+ +    P   TYN +I+   +    +  K LL  M+A 
Sbjct: 371 LISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAV 430

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PNVVTY  L++ Y + G +++A    E L D+       M   G  P  +  N++++
Sbjct: 431 GCKPNVVTYAALINGYAKHGMYEEA----ESLFDE-------MSAKGCFPDIITYNTVLS 479

Query: 600 AFGEDQRDAEAFAVLQYMKENG--LKPDVVTYTTLMKALIRVD 640
           AF +    ++A  V Q +K       PD +TY  L+    R +
Sbjct: 480 AFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAE 522



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 168/404 (41%), Gaps = 65/404 (16%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G      TY  +I  L  SG    A+A+ +++ ++G  P    Y AL+ G  K     DA
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA- 413
              V  M RSG  PD  TY+ LI     A R + A +VL+E+  +   PN   YS ++  
Sbjct: 65  IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 414 -GYRDRGEWQRTF---QVLK--------------------------------EMKSSGVE 437
              R R +  R      +L+                                EM  SG  
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   YN  I    K   L   +   + M   GI PD +T+ ++I    K  R D A ++
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIY 555
           F+ M ERG  P + TY+IM++ L    R + V  +L +M+A   G +  V T+   +   
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 556 GQSGRFDDA-------IE-----------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
            +SG+F  A       IE                 C  G  D A    R M   G  KP 
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMK-ENGLKPDVVTYTTLM 633
            +  N+LI+ F +  R ++A  +L  MK +N   PDVVTY TL+
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLI 408



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 145/355 (40%), Gaps = 56/355 (15%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +  +G       Y  L+ G  K G L  A+ ++ +M  +G  P+  TY+ LID    A R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN- 444
              A   +K M  S  +P+   Y+ ++ G            VL+E+  +G  P+   Y+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 445 -------------------------------VMIDT-FG---------KYNCLHHAMAAF 463
                                          V ID  FG         +Y C        
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG----- 175

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           D M+  G  PD +T+NT I    K G+ D+  E+ EEM   G  P   T+  +I+ L + 
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
            R +D  ++   M  +G +P+ +TY+ ++D   ++ R D   E LE +  QA+ A  VM 
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM--QAMKAGCVME 293

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                      N+ I A     +   A  +L  M E+G  P++++Y  ++  L +
Sbjct: 294 V-------YTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 341



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G+      +L++M  +G  P+   Y  +ID   K    H A+    RML
Sbjct: 13  YTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML 72

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G EPD +T+N+LI       R D A  + +E+   G+ P   TY+ ++     + R +
Sbjct: 73  RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLD 132

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLV------------------DIYGQSGRFDDAIE--- 566
             + L+  M  +G + N+V Y   +                  D   +SGR  D +    
Sbjct: 133 QARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNT 192

Query: 567 -----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C  G  D+ +     M   G+ P  +   S+I+   +  R  +AF V + M E G
Sbjct: 193 FISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 252

Query: 622 LKPDVVTYTTLMKALIRVDKFHKV 645
             PD +TY+ ++  L R ++   V
Sbjct: 253 CVPDSLTYSIMLDNLSRANRLDTV 276



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 29/249 (11%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M ++G +     Y  +ID   K   L  A A   +M   G  P+ +T+  LID   K  R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A +  + M   G  P   TYN +I+ L    R +D   +L  +   G  PN +TY+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 551 LVDIYGQSGRFDDA-------------------IECLEGLSDQAVNAFRVMRTDGLK--- 588
           LV    +  R D A                   I+C+ G  +    + R    DG +   
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 589 ----PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDK 641
               P  +  N+ I+   +  +  +   +L+ M   G+ PDVVT+ +++  L    R+D 
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 642 FHKVFSSYL 650
             +VF   L
Sbjct: 241 AFQVFKGML 249



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 119/253 (47%), Gaps = 17/253 (6%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
            +++L+   C +   +  A+ ++  ++  N+C    + Y+ LI    +   L +A LL Q
Sbjct: 367 FFNTLISGFCKA-GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425

Query: 188 RQRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             +        +TY ALI+  A++   E+A +L  +M   G   D I Y+ V+ + ++  
Sbjct: 426 EMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485

Query: 243 KIDSSLLQKLYKEIE-----CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
            +  +  + +Y++++     C    +  ++L D   G+ +A D  + +  L      G S
Sbjct: 486 MMSKA--EGVYQQLKNKTSYCSPDAITYRILID---GYCRAEDTEQGLTLLQEMTARGWS 540

Query: 298 PKTATYAAVITALSNSGRT-IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
             + TY  +I  L+ +     +A AV++++ +    P    +N+L++ +++ G +  A  
Sbjct: 541 CDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARS 600

Query: 357 VVSEMERSGVLPD 369
           +V EM   G L D
Sbjct: 601 MVQEMNEKGHLVD 613


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 16/482 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPL-TYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L+ AL R   L +   L+ R  +  L TY  LI+A     DL  A   +S + + G   D
Sbjct: 49  LLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPD 108

Query: 228 FINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
              Y+  +    RT     +  L  L  +  C +       L   + G   AG   +AM 
Sbjct: 109 SHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAAL---LQGLCGAGMVREAMA 165

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                   G +P +  Y+ ++  L  +GR  EA A+  +    G  P    YNAL+ GY 
Sbjct: 166 VFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYC 225

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L+ A  +   M+  G LP+  TY+ LI  +  +G+ E A ++   M  +   PN  
Sbjct: 226 STGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVV 285

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G  +  F++L  M++ G+ P+     V+ID   K+  +  A      +
Sbjct: 286 TYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSL 345

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           + +GI+ + + + ++ID   K G++D A  L +++   G+ P    Y+ +I+ L  + + 
Sbjct: 346 VQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKL 405

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            +   LL +M   G+  N V +T L+D + +  R D      + +SD+       M   G
Sbjct: 406 LEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP----KMISDR-------MAAAG 454

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +KP  +     I ++ +D R  +A +++  M ++G++P++ TY TL+K    +    + F
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514

Query: 647 SS 648
           SS
Sbjct: 515 SS 516



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 184/410 (44%), Gaps = 14/410 (3%)

Query: 183 FLLSQRQ-RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
            L+ QR    TP TY AL+        + +A+ + + M  DG   D   YS+++  L   
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +   ++   L  +        +  + N +I G+   GD   A+      Q  G  P   
Sbjct: 193 GRAGEAV--ALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVR 250

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +I     SG+   A  ++  + E+GL P    Y  L++G    G+L+ A  ++  M
Sbjct: 251 TYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           E  G+ P+E T  +LIDA    GR E A+  L  +     K N  IY+ ++      G++
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +++++ + G  PD H Y+ +ID   + N L  A++  + M+  G++ + + +  L
Sbjct: 371 DGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID H +  R D  + + + M   G  P   TY + I    +  R ED + ++  M   G+
Sbjct: 431 IDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGV 490

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
            PN+ TY TL+  Y              GL  QA ++ + M  +G KP++
Sbjct: 491 RPNLTTYNTLIKGYANL-----------GLVSQAFSSLKNMIDNGCKPND 529



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/526 (22%), Positives = 215/526 (40%), Gaps = 36/526 (6%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++++L+   CS+   ++LA  +   +Q    C      Y+ LI    +S K+  A +L  
Sbjct: 216 VYNALIDGYCSTGD-LELAIDIFKGMQSKG-CLPNVRTYTQLICGFCKSGKVERAMVLYS 273

Query: 188 RQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           R     L P  +TY  LI        LE A  L+  M   G   +     ++I +L +  
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +I+ +  Q+    +    I+++  +   +I    K+G    A   +      G  P    
Sbjct: 334 RIEEA--QQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHM 391

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L    + +EA ++  ++ ESG++     +  L+  +++       + +   M 
Sbjct: 392 YSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMA 451

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +GV PD  TY++ I +Y   GR E A  ++ +M     +PN   Y+ ++ GY + G   
Sbjct: 452 AAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVS 511

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA------------AFDRMLSEG 470
           + F  LK M  +G +P+   Y V++    K N  H  +A              + +L E 
Sbjct: 512 QAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEV 571

Query: 471 IEPDTITWNTLIDCHFKC-GRYDRAEE---LFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           I+    + + + DC  +C  + DR EE       MQ     P    Y  MI      +  
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLL 631

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++  R L +M  +  LP + +Y           RF     C EG    A + F  + +  
Sbjct: 632 KEALRFLDSMVKRNYLPRLESY-----------RFIICALCEEGSFHTAKSIFGDILSKE 680

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                +A   LI+   +    A+   +L +M+E   +P    Y+ L
Sbjct: 681 YNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 11/211 (5%)

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           + H Y  +I+ +     L  A      +L  G+ PD+  + + +  + + G +  A  LF
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
             M +RG      TY  ++  L       +   +   M   G  P+   Y+ +V     +
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           GR  +A+  L     +           G  P+    N+LI+ +        A  + + M+
Sbjct: 193 GRAGEAVALLTDAMGK-----------GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQ 241

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             G  P+V TYT L+    +  K  +    Y
Sbjct: 242 SKGCLPNVRTYTQLICGFCKSGKVERAMVLY 272


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 210/473 (44%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y ALISA +R      A+ +  +M  +G     + Y++V+   ++       +L  L   
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA-LVDS 237

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +  D I LD    N +I    +     +A +     +  G  P   T  +++     + R
Sbjct: 238 MRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V +E+++ G  P    YN+L+  YVK G L++A  +  EME  G+ PD  TY+ 
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTT 357

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+     AG+ ++A     EM  +  KPN   Y+ ++  +  RG++     V  E++S+G
Sbjct: 358 LVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+ +LI  + +CG +D+A 
Sbjct: 418 FVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAM 477

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+++ M E G  P  +TYN +++ L    RWE  ++L   M      P+ ++Y++L+  Y
Sbjct: 478 EIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAY 537

Query: 556 GQSGRFD-----------DAIECLEGLSDQAV-------------NAFRVMRTDGLKPSN 591
             + + D           + IE   GL    V              AF  +R        
Sbjct: 538 ANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDI 597

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++I+ +G++    +   +L  MKE+ +     TY +LM    R+    K
Sbjct: 598 NVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEK 650



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 19/444 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LIS+  ++  LE+A  L  +M   G   D I Y+ ++  L R  KID+++    Y
Sbjct: 318 VTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAI--GTY 375

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+  +  + +    N +I      G   + M      +  G  P   T+  ++     +
Sbjct: 376 NEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQN 435

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   E   VF+E+K+SG  P    Y +L+  Y + G    A  +   M  +G+ PD  TY
Sbjct: 436 GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTY 495

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++ A A  GRWE A  +  EME   ++P+   YS +L  Y +  +  +   + +++ +
Sbjct: 496 NAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYA 555

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             +E        ++    K N L     AF  +       D    N +I  + K G   +
Sbjct: 556 ERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKK 615

Query: 494 AEELFEEMQERGYFPCTTTYNIMINL---LGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            EE+   M+E      T TYN ++++   LG+ E+ E++   + + RA+   P+  +Y T
Sbjct: 616 VEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRAR---PDRYSYNT 672

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++  YG+ G+             +A   F  M+  GL P  +  N  + ++  +    EA
Sbjct: 673 MIYAYGRKGQM-----------KEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEA 721

Query: 611 FAVLQYMKENGLKPDVVTYTTLMK 634
             +++YM  +G KP+  TY T+++
Sbjct: 722 IDLVRYMVTHGCKPNERTYNTILQ 745



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 204/453 (45%), Gaps = 13/453 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T N+L+    +    ++A+ ++ +M Q G     + Y+ +I S  +   ++ +   +L 
Sbjct: 283 VTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEA--TQLK 340

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+E   IE D      ++ G  +AG    A+         G  P   TY A+I      
Sbjct: 341 EEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVR 400

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  E   VF+E++ +G  P    +N LL  + + G   +   V  EM++SG +P+  TY
Sbjct: 401 GKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTY 460

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             LI +Y+  G ++ A  + K M  +   P+   Y+ +L+     G W++  ++  EM++
Sbjct: 461 VSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMEN 520

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
               PD   Y+ ++  +     L    +  + + +E IE       TL+  + K      
Sbjct: 521 LDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSD 580

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            E+ F E++ R         N MI++ G+    + V+ +L  M+   +  +  TY +L+ 
Sbjct: 581 TEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMH 640

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           +Y    R  D  +C   L++        +++   +P   + N++I A+G   +  EA  +
Sbjct: 641 MYS---RLGDCEKCENILTE--------IKSSRARPDRYSYNTMIYAYGRKGQMKEASRL 689

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              MK +GL PD+VTY   +K+ +    F +  
Sbjct: 690 FSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAI 722



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 12/318 (3%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN-AGRWESARI 391
           P   AY AL+    +    +DA  V   M  +GV P   TY++++  Y+  A  W+    
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           ++  M       + + Y+ +++  R R  ++   +V  EM+++G EPD    N ++D +G
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K      A+     M   G  P  +T+N+LI  + K G  + A +L EEM+ +G  P   
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY  +++ L    + +        M   G  PN+ TY  L+ ++G  G+F + +      
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMM------ 407

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                  F  +R+ G  P  +  N+L+  FG++  D E   V + MK++G  P+  TY +
Sbjct: 408 -----IVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVS 462

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+ +  R   F +    Y
Sbjct: 463 LISSYSRCGLFDQAMEIY 480



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 12/214 (5%)

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-RYDRAE 495
           +PD   Y  +I    + +    A+A F RM++ G+ P  +T+N ++  + K    +    
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L + M++ G      TYN +I+    +  +++  ++   MRA G  P+ VT  +L+D+Y
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G++ R+D+AI  L           + M   G  PS +  NSLI+++ +D    EA  + +
Sbjct: 293 GKARRYDEAIGVL-----------KEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKE 341

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            M+  G++PDV+TYTTL+  L R  K      +Y
Sbjct: 342 EMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTY 375



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/413 (22%), Positives = 170/413 (41%), Gaps = 42/413 (10%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+ L+  L R+ K+  A      +L    +    TYNALI          + + +  +
Sbjct: 353 ITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDE 412

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +R  G+  D + ++ ++    + N +D+ +   ++KE++      +      +I  +++ 
Sbjct: 413 IRSAGFVPDVVTWNTLLAVFGQ-NGLDTEV-SGVFKEMKKSGYVPERDTYVSLISSYSRC 470

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +AM         G+ P  +TY AV++AL+  GR  +AE +F E++    +P   +Y
Sbjct: 471 GLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSY 530

Query: 339 NALLKGYV-----------------------------------KMGYLKDAEFVVSEMER 363
           ++LL  Y                                    K+  L D E    E+ R
Sbjct: 531 SSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRR 590

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                D +  + +I  Y   G  +    +L  M+ S    ++  Y+ ++  Y   G+ ++
Sbjct: 591 RRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEK 650

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +L E+KSS   PD + YN MI  +G+   +  A   F  M   G+ PD +T+N  + 
Sbjct: 651 CENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVK 710

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +     ++ A +L   M   G  P   TYN ++       R  D K  + N+
Sbjct: 711 SYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNL 763



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 2/309 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY +LIS+ +R    ++A+ +  +M + G H D   Y+ V+ +L R  + + +  +KL+ 
Sbjct: 459 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQA--EKLFA 516

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+E      D    + ++  +A A    K            +         ++   S   
Sbjct: 517 EMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVN 576

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              + E  F EL+           NA++  Y K G +K  E ++S M+ S +     TY+
Sbjct: 577 NLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYN 636

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+  Y+  G  E    +L E++ S A+P+ + Y+ ++  Y  +G+ +   ++  EMK S
Sbjct: 637 SLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCS 696

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   YN+ + ++   +    A+     M++ G +P+  T+NT++  +   GR    
Sbjct: 697 GLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADG 756

Query: 495 EELFEEMQE 503
           +     + E
Sbjct: 757 KSFISNLPE 765



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 17/233 (7%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTPLTYNALI-------SACARNDDLEKA 212
           EL YS L+HA   ++KL +   LS+    +R+   ++N L+       S      D EKA
Sbjct: 527 ELSYSSLLHAYANAKKLDKMKSLSEDIYAERIE--SHNGLVKTLVLVNSKVNNLSDTEKA 584

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
             L  + R+     + +N  + I       K    +L  L KE     I L     N ++
Sbjct: 585 F-LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILS-LMKE---SSINLSTATYNSLM 639

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             +++ GD  K    L   +     P   +Y  +I A    G+  EA  +F E+K SGL 
Sbjct: 640 HMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLV 699

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           P    YN  +K YV     ++A  +V  M   G  P+E TY+ ++  Y + GR
Sbjct: 700 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGR 752


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 211/440 (47%), Gaps = 19/440 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN L+ A  +N+ ++ A  L+ +M   G   D ++Y+ VI S+++  K++ +      +
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA------R 239

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+   + + +  + N +I GF +     +    LG     G+ P   TY+ VI++LS  G
Sbjct: 240 ELSI-RFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIG 298

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A AV+ ++   G  P    + +L+KGY   G + +A  + + M   G  P+   Y+
Sbjct: 299 NVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYN 358

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI    + G+   A  V  +ME +   PN   Y  ++ G+   G+     ++  +M ++
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   Y  M++   + +    A +  ++M ++   P+T+T+NT I      GR + A
Sbjct: 419 GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF +M++ G  P   TYN +++ L ++ R ++   L+  M  +G+  N+VTY T+   
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           +   G+F++A++ L             M   G+KP  +  N+L  A+    +   A  +L
Sbjct: 539 FCNVGKFEEALKLLGK-----------MLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL 587

Query: 615 QYMKENG-LKPDVVTYTTLM 633
             +   G   P+V  YT+L+
Sbjct: 588 DKLSAGGKWVPEVAAYTSLL 607



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 214/491 (43%), Gaps = 27/491 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMS 217
           +L Y I+I  LGR   +     L Q+ +L  ++     +  +I+   R    E+AL +  
Sbjct: 79  QLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFY 138

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           ++R+ G       Y+ ++ ++   N+    +++ +Y  ++ D  E +    N ++    K
Sbjct: 139 RIREFGCQPTVKIYNHLLDAMLSENRFQ--MIEPIYSNMKRDGKEPNVYTYNILLKALCK 196

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK--PRT 335
                 A + L      G  P   +Y  VI+++S  G+        EE +E  ++  P  
Sbjct: 197 NNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV-------EEARELSIRFQPNV 249

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YNAL+ G+ +   +K+   ++ +M   G+ P+  TYS +I + +  G  E A  V  +
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M V    PN + ++ ++ GY  RG       +   M   G EP+   YN +I     +  
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK 369

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A++   +M   G  P+  T+  LID   K G    A E++ +M   G  P    Y  
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTS 429

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           M+N+L     +     L+  M      PN VT+ T +     SGR    +EC       A
Sbjct: 430 MVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR----VEC-------A 478

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +N F  M   G  P+    N +++   ++ R  EA  ++  M+E G++ ++VTY T+   
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538

Query: 636 LIRVDKFHKVF 646
              V KF +  
Sbjct: 539 FCNVGKFEEAL 549



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 16/353 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+S     +  VI      G   +A  +F  ++E G +P  K YN LL   +     +  
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E + S M+R G  P+ +TY++L+ A     R + A  +L EM     +P+   Y+ +++ 
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G+ +   ++     S   +P+   YN +I+ F +   +        +M+ +GI+P+
Sbjct: 229 MSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT++T+I      G  + A  ++ +M  RG  P   T+  ++     + R  +   +  
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  PNVV Y TL  I+G          C  G   +AV+    M  +G  P+    
Sbjct: 344 RMAEEGFEPNVVAYNTL--IHGL---------CSHGKMGEAVSVSSKMERNGCSPNVSTY 392

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +LI+ F +      A  +   M  NG  P+VV YT+++  L R   F + +S
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWS 445



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 43/323 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLS---QRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH L    K+ EA  +S   +R   +P   TY ALI   A+  DL  A  + +KM 
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + + Y+ ++  L R     SS+  + +  IE  K+  D                
Sbjct: 417 TNGCIPNVVVYTSMVNVLCR-----SSMFSQAWSLIE--KMSTDN--------------- 454

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                            P T T+   I  L  SGR   A  +F ++++ G  P  K YN 
Sbjct: 455 ---------------CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L G +K   +K+A  +V+EME  G+  +  TY+ +   + N G++E A  +L +M V  
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV-EPDTHFYNVMIDTFGKYNCLHHA 459
            KP++  Y+ +   Y  +G+ +   Q+L ++ + G   P+   Y  ++        +  A
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619

Query: 460 MAAFDRMLSEGIEPDTITWNTLI 482
           +   D+ML+EGI  +  TWN L+
Sbjct: 620 VLYLDKMLNEGICLNAATWNALV 642



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 106/273 (38%), Gaps = 57/273 (20%)

Query: 134 KNLCSSNSSI------------DLAYAVVSWLQKH-NLCYSYELLYSILIHALGRSEKLY 180
           +N CS N S             DL  A   W +   N C    ++Y+ +++ L RS    
Sbjct: 382 RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441

Query: 181 EAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           +A+ L ++          +T+N  I     +  +E A+NL  +M Q G   +   Y+ V+
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
             L + N+I  +L  +L  E+E   +EL+    N +  GF   G   +A++ LG     G
Sbjct: 502 DGLLKENRIKEAL--ELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAY---------------- 338
           + P   TY  +  A    G+   A  + ++L   G   P   AY                
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619

Query: 339 -------------------NALLKG-YVKMGYL 351
                              NAL++G +  +G+L
Sbjct: 620 VLYLDKMLNEGICLNAATWNALVRGLFNSLGHL 652



 Score = 38.9 bits (89), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 90/213 (42%), Gaps = 20/213 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           +++ +K LC S   ++ A  +   ++++  C      Y+ ++  L +  ++ EA  L   
Sbjct: 462 FNTFIKGLCCS-GRVECAINLFCQMEQYG-CSPNIKTYNEVLDGLLKENRIKEALELVTE 519

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +   L  +TYN +          E+AL L+ KM   G   D I Y+ +  +     K
Sbjct: 520 MEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGK 579

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDV------IVGFAKAGDASKAMRFLGMAQGVGLS 297
           + ++ +Q L      DK+   G+ + +V      + G        +A+ +L      G+ 
Sbjct: 580 VKTA-IQLL------DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGIC 632

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
              AT+ A++  L NS   +    + +++  SG
Sbjct: 633 LNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 198/416 (47%), Gaps = 13/416 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + +  ++ +L R     + L   L K IE  +IE D    N +I  F++      A   L
Sbjct: 85  VEFDKLLSALVRIKHYGTVL--SLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVL 142

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           G    +G  P   T++++I  L    +   A   F+E+  SG +P    YN ++KG+ K+
Sbjct: 143 GKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKI 202

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G    A  ++ +M+++G  PD   Y+ +ID          A  +  E++    +P+ F Y
Sbjct: 203 GKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY 262

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S ++ G  +  + +    +  EM S  + PD   +N+++D   K   L  A      M+ 
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G+EP+  T+N+L++ +    +   A  +F+ M  +G  P   +YNI+IN   + +R ++
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            + L   M  +GL+PN   Y TL+    Q+GR  +A E            F+ M+  G  
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE-----------LFKDMQAQGCS 431

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           P  +    L+++  +      A  + + M+++ LKP++VTY  L++A+ +  K ++
Sbjct: 432 PDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 193/407 (47%), Gaps = 17/407 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           ++ L+SA  R       L+L  ++       D  +++++I   +R  ++D   S+L K+ 
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       E D    + +I G       ++AM F       G  P   TY  +I      
Sbjct: 147 KL----GFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKI 202

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+T  A  + +++ ++G +P    YN ++ G  K   + +A  + SE++  GV PD  TY
Sbjct: 203 GKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY 262

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+L+    N+ + E A  +  EM   +  P+   ++ ++      G       ++K M  
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GVEP+   YN +++ +   N +  A   FD M+++G  P+ +++N LI+ + K  R D 
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELF+EM  RG  P T  YN +I+ L +  R  + + L  +M+AQG  P++VT T L+D
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLD 442

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
                        C  G  D A+  FR M+   LKP+ +  + LI A
Sbjct: 443 SL-----------CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 198/429 (46%), Gaps = 9/429 (2%)

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT- 195
           CS  +  D  ++    + KH L    E  +  L+ AL R +       LS+R  L  +  
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVE--FDKLLSALVRIKHYGTVLSLSKRIELLRIER 117

Query: 196 ----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
               +N LI+  +R   ++ A +++ K+ + G+  D + +S +I  L   +K   ++  +
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM--E 175

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
            + E+     + +    N +I GF K G  + A+  L      G  P    Y  +I  L 
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                 EA  +F E+K  G++P    Y+ L+ G       ++A  + +EM    ++PD  
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+++L+D     G    A+ ++K M     +PN   Y+ ++ GY  + +      V   M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            + G  P+   YN++I+ + K   +  A   FD M   G+ P+T  +NTLI    + GR+
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A ELF++MQ +G  P   T  I+++ L +    ++  RL   M+   L PN+VTY  L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 552 VDIYGQSGR 560
           +    +SG+
Sbjct: 476 IRAMYKSGK 484



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 166/368 (45%), Gaps = 42/368 (11%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLT----PLTYNALISACARNDDLEKALNLMSKMR 220
           ++ILI+   R +++  AF +L +  +L      +T+++LI+     D   +A+    +M 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             GY  +   Y+ +I+   +  K  +++   L K+++      D  + N +I G  K   
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGK--TTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK------------- 327
            S+A+      +G G+ P   TY+ ++  L NS +  EA A+F E+              
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 328 ----------------------ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
                                 E G++P    YN+L+ GY     + +A  V   M   G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            +P+  +Y++LI+ Y  A R + AR +  EM      PN+F Y+ +++G    G      
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++ K+M++ G  PD     +++D+  K   L +A+  F  M    ++P+ +T++ LI   
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 486 FKCGRYDR 493
           +K G+  R
Sbjct: 480 YKSGKIYR 487



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 14/322 (4%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    ++ LL   V++ +      +   +E   +  D   +++LI+ ++   R + A  V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +P++  +S ++ G     ++ R  +   EM +SG +P+ H YN +I  F K
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A+    +M   G  PD + +NT+ID   K      A ++F E++ +G  P   T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+I+++ L   ++ E+   L   M +  ++P+VVT+  LVD             C EG+ 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL-----------CKEGML 310

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A    ++M   G++P+    NSL+N +    +  EA  V   M   G  P+VV+Y  L
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370

Query: 633 MKALI---RVDKFHKVFSSYLF 651
           +       R+D+  ++F    F
Sbjct: 371 INGYCKAQRIDEARELFDEMSF 392



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 47/239 (19%), Positives = 101/239 (42%), Gaps = 19/239 (7%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNS 141
           + ++ L++ L  +   E ASAL +   SLN            +P  +  ++L +      
Sbjct: 260 FTYSILMHGLCNSDQKEEASALFNEMMSLN-----------IMPDVVTFNILVDKLCKEG 308

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTY 196
            +  A  ++  + +  +  +Y   Y+ L++      K++EA      ++++      ++Y
Sbjct: 309 MLSEAQGIIKIMIEKGVEPNYA-TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSY 367

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N LI+   +   +++A  L  +M   G   +  NY+ +I  L +  +   +  ++L+K++
Sbjct: 368 NILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA--RELFKDM 425

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +      D      ++    K G    A+R     Q   L P   TY  +I A+  SG+
Sbjct: 426 QAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 213/468 (45%), Gaps = 26/468 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  LI+A     DL  +   +S + + G+  D   Y+  +    R   +  +   +L+ 
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHAC--RLFV 131

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +              ++ G   AG   +AM      Q  G +P    YA ++  L  +G
Sbjct: 132 LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAG 191

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           RT EAE +  +    G +P    YNAL+ GY  +G L+ A  V   M+ +G  P+  TY+
Sbjct: 192 RTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYT 251

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI  +  + + + A ++   M  +   PN   Y+ ++ G    G+    +++L+ M++S
Sbjct: 252 ELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS 311

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P+    +V+ID   K+  +  A      ++ +GI+ + I + +LID   K GR+  A
Sbjct: 312 GLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAA 371

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           + L + +  +G+ P   TY+ +I+ L  Q+   +   +L +M  +G+ P+ VTYT ++D 
Sbjct: 372 DRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDE 431

Query: 555 Y-------GQSGRFDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPS 590
                   G     D  I                  C EG  + A +    M   G+ P+
Sbjct: 432 LVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  N+LI  +      ++AF+  ++M  NG KP+  +YT L++ LI+
Sbjct: 492 LVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 229/528 (43%), Gaps = 34/528 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           + +LL  LC +   +  A +V + +Q    C     +Y+ ++H L  + +  EA  L   
Sbjct: 145 YTALLHGLCGAGM-VREAMSVFAGMQADG-CAPDPHVYATMVHGLCGAGRTREAETLLSD 202

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  +   P  + YNALI       DLE A+++  +M  +G   +   Y+ +I    ++ K
Sbjct: 203 AMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRK 262

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLS 297
           +D +++  L+  +      +D  L+ +V+       G    G    A R L   +  GL 
Sbjct: 263 LDRAMM--LFSRM------VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLV 314

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   T + +I AL    R  EA+ +   L + G+K     Y +L+ G  K G    A+ +
Sbjct: 315 PNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRL 374

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  +   G +PD HTYS LID          A +VL +M     +P+   Y+ I+     
Sbjct: 375 MQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVR 434

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                 + ++L +M ++G++PD   Y + + ++     +  A      M+  G+ P+ +T
Sbjct: 435 EVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVT 494

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR------ 531
           +N LI  +   G   +A   F+ M   G  P   +Y +++ LL ++E   ++        
Sbjct: 495 YNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIW 554

Query: 532 LLGNMR-AQGLLPNVVTYT--TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
            +  M+   GLL  +V     + +DIY     F  ++ C     D+A      M++  L 
Sbjct: 555 KIAEMKYLHGLLEEMVKLQLPSEIDIYNC---FLTSL-CRVDRLDEAKILLIEMQSANLT 610

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           PS     S+I      +   EA   +  M ++G  P + +Y  ++ +L
Sbjct: 611 PSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSL 658



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 114/539 (21%), Positives = 214/539 (39%), Gaps = 36/539 (6%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++++L+   C+    ++LA  V   +   N C      Y+ LI    +S KL  A +L  
Sbjct: 214 VYNALIDGYCNVGD-LELAVDVFERMDV-NGCSPNVRTYTELISGFCKSRKLDRAMMLFS 271

Query: 188 RQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           R     L P  +TY ALI     +  L+ A  L+  M   G   +    S++I +L +  
Sbjct: 272 RMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHE 331

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++  +  Q L   +    I+++  +   +I G  KAG  + A R +      G  P   T
Sbjct: 332 RVGEA--QLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L       EA  V +++ E G++P    Y  ++   V+      ++ ++ +M 
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            +G+ PD  TY++ + +Y + GR E A  ++  M      PN   Y+ ++ GY + G   
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC----------------LHHAMAAFDRM 466
           + F   K M ++G +P+   Y V++    K                   + +     + M
Sbjct: 510 QAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEM 569

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +   +  +   +N  +    +  R D A+ L  EMQ     P    Y  +I      +  
Sbjct: 570 VKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKML 629

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
            +    + +M   G +P + +Y  ++              C EG    A   F  M +  
Sbjct: 630 TEALTFVDSMVKSGYIPQLESYRHIISSL-----------CEEGSIQTAKQVFGDMLSKE 678

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
                +A   LI+   +    AE  ++L  M+E   +P    Y  L   +   +   ++
Sbjct: 679 YNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQEI 737



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/390 (22%), Positives = 160/390 (41%), Gaps = 23/390 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E++Y+ LI  L ++ +   A  L Q    Q   P   TY++LI    R  +L +A+ ++ 
Sbjct: 352 EIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLD 411

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G     + Y+++I  L R    D S  +K+  ++    I+ D       +  +  
Sbjct: 412 DMMEKGVQPSPVTYTIIIDELVREVGADGS--KKILDKMIAAGIKPDVFTYTIFVRSYCH 469

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A   +      G+ P   TY A+I   +N G T +A + F+ +  +G KP  ++
Sbjct: 470 EGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEES 529

Query: 338 YNALLKGYVK----------------MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           Y  LL+  +K                +  +K    ++ EM +  +  +   Y+  + +  
Sbjct: 530 YTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R + A+I+L EM+ ++  P+  +Y+ I+A              +  M  SG  P   
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLE 649

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  +I +  +   +  A   F  MLS+    + I W  LID   + G       L   M
Sbjct: 650 SYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +E+ Y P    Y  +   + +    +++ R
Sbjct: 710 EEKNYRPSDALYARLTGKITDANDIQEIAR 739


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 244/529 (46%), Gaps = 24/529 (4%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL-LYSILIHALGRSEKLY 180
           R  P+ +  S L +  +  +  DL  ++   +Q  NL  S+ L  YSI I+   R  +L 
Sbjct: 70  RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ--NLGISHNLYTYSIFINYFCRRSQLS 127

Query: 181 EAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            A  +L +  +L    + +T N+L++     + + +A+ L+ +M + GY  D + ++ ++
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
             L + NK   ++   L + +     + D      VI G  K G+   A+  L   +   
Sbjct: 188 HGLFQHNKASEAV--ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           +      Y  +I  L       +A  +F +++  G+KP    YN L+      G   DA 
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAG 414
            ++S+M    + PD   ++ LIDA+   G+   A  +  EM  S H  P+   Y+ ++ G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +      +   +V +EM   G+  +T  Y  +I  F +     +A   F +M+S+G+ PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+N L+D     G  + A  +FE MQ+R       TY  MI  L +  + ED   L  
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           ++  +G+ PNVVTYTT++  +           C +GL ++A   F  M+ DG  P++   
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGF-----------CRKGLKEEADALFVEMKEDGPLPNSGTY 534

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL--IRVDK 641
           N+LI A   D  +A +  +++ M+  G   D  T+  +   L   R+DK
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 203/434 (46%), Gaps = 14/434 (3%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L+ A+ L   M +       + +S ++ ++ + NK D  L+  L ++++   I  +    
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 113

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           +  I  F +    S A+  LG    +G  P   T  +++    +  R  EA A+ +++ E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P T  +  L+ G  +     +A  +V  M   G  PD  TY  +I+     G  + 
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L +ME    + +  IY+ I+ G          F +  +M++ G++PD   YN +I 
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYF 507
               Y     A      ML + I PD + +N LID   K G+   AE+L++EM + +  F
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    YN +I    + +R E+   +   M  +GL+ N VTYTTL  I+G    F  A +C
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL--IHG----FFQARDC 407

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                D A   F+ M +DG+ P  +  N L++    +     A  V +YM++  +K D+V
Sbjct: 408 -----DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462

Query: 628 TYTTLMKALIRVDK 641
           TYTT+++AL +  K
Sbjct: 463 TYTTMIEALCKAGK 476



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D A  LF +M +   FP    ++ +++ + +  +++ V  L   M+  G+  N+ TY+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
             ++ + +  +   A+  L           ++M+  G  PS + LNSL+N F    R +E
Sbjct: 115 IFINYFCRRSQLSLALAILG----------KMMKL-GYGPSIVTLNSLLNGFCHGNRISE 163

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A A++  M E G +PD VT+TTL+  L + +K
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 11/212 (5%)

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P    ++ ++    K N     ++  ++M + GI  +  T++  I+   +  +   A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M + GY P   T N ++N      R  +   L+  M   G  P+ VT+TTLV    Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             +  +A+  +E            M   G +P  +   ++IN   +      A  +L  M
Sbjct: 193 HNKASEAVALVER-----------MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++  ++ DVV Y T++  L +       F  +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 212/480 (44%), Gaps = 29/480 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+  LI+   +  ++++A +L   M Q G   D I YS +I    +   +   +  KL+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML--GMGHKLF 344

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +     ++LD  + +  I  + K+GD + A          G+SP   TY  +I  L   
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA  ++ ++ + G++P    Y++L+ G+ K G L+    +  +M + G  PD   Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
            +L+D  +  G    A     +M     + N  +++ ++ G+     +    +V + M  
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   +  ++        L  A+  F RM   G+EPD + + TLID   K  +   
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             +LF+ MQ           N++I+LL +  R ED  +   N+    + P++VTY T++ 
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644

Query: 554 IYGQSGRFDDA------------------------IECLEGLSDQAVNAFRVMRTDGLKP 589
            Y    R D+A                        + C     D A+  F +M   G KP
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           + +    L++ F +      +F + + M+E G+ P +V+Y+ ++  L    RVD+   +F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 19/443 (4%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE- 255
           L+  C R   ++KAL +     Q G      +   ++ SL  ++++D  +    KL +  
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           IE   +   G +L+ +   F K G+ +KA+ F  +    G      +   V+  LS    
Sbjct: 212 IEPSGVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI 267

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A  +   + + G  P    +  L+ G+ K G +  A  +   ME+ G+ PD   YS 
Sbjct: 268 EV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID Y  AG       +  +      K +  ++S  +  Y   G+      V K M   G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y ++I    +   ++ A   + ++L  G+EP  +T+++LID   KCG      
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L+E+M + GY P    Y ++++ L +Q       R    M  Q +  NVV + +L+D +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            +  RFD+A++            FR+M   G+KP      +++     + R  EA  +  
Sbjct: 507 CRLNRFDEALK-----------VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            M + GL+PD + Y TL+ A  +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCK 578



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 210/465 (45%), Gaps = 29/465 (6%)

Query: 144 DLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLT 195
           DLA A V +  K  LC       + Y+ILI  L +  ++YEAF     +L +    + +T
Sbjct: 371 DLATASVVY--KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y++LI    +  +L     L   M + GY  D + Y +++  L++   +  ++  +   +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM--RFSVK 486

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    I L+  + N +I G+ +     +A++   +    G+ P  AT+  V+      GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +F  + + GL+P   AY  L+  + K         +   M+R+ +  D    ++
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEMK 432
           +I       R E A      +     +P+   Y+ ++ GY   R   E +R F++LK   
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK--- 663

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +   P+T    ++I    K N +  A+  F  M  +G +P+ +T+  L+D   K    +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            + +LFEEMQE+G  P   +Y+I+I+ L ++ R ++   +        LLP+VV Y  L+
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             Y + GR  +A    E            M  +G+KP +L   +L
Sbjct: 784 RGYCKVGRLVEAALLYEH-----------MLRNGVKPDDLLQRAL 817



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           +L  G  P+ +T+ TLI+   K G  DRA +LF+ M++RG  P    Y+ +I+   +   
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
                +L      +G+  +VV +++ +D+Y +SG           L+  +V  ++ M   
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD----------LATASV-VYKRMLCQ 385

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+ P+ +    LI    +D R  EAF +   + + G++P +VTY++L+    +       
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445

Query: 646 FSSY 649
           F+ Y
Sbjct: 446 FALY 449


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 216/487 (44%), Gaps = 20/487 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
            +Y+ LI +L +     EA LL  R     L P  +TY+ LI    R   L+ AL+ + +
Sbjct: 368 FVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G       Y+ +I    +   I ++  + L  E+   K+E        ++ G+   
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAA--ESLMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  +KA+R      G G+ P   T+  +++ L  +G   +A  +F E+ E  +KP    Y
Sbjct: 486 GKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTY 545

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N +++GY + G +  A   ++EM   G++PD ++Y  LI      G+   A++ +  +  
Sbjct: 546 NVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
            + + N   Y+ +L G+   G+ +    V ++M   GV+ D   Y V+ID   K+     
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKV 665

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +     M   G++PD + + ++ID   K G +  A  +++ M   G  P   TY  +IN
Sbjct: 666 FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS-GRFDDAIECLEGLSDQAVN 577
            L +     + + L   MR    +PN VTY   +DI  +  G    A+E    +      
Sbjct: 726 GLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI------ 779

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   GL  +    N LI  F    R  EA  ++  M  +G+ PD +TYTT++  L 
Sbjct: 780 ------LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833

Query: 638 RVDKFHK 644
           R +   K
Sbjct: 834 RRNDVKK 840



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 24/460 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  +I +     DL +A  ++ +M   G   + + Y+++I  L +  K+  ++   + K+
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV--GIKKD 287

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   +++ D      ++ G  K  +    +  +     +  SP  A  ++++  L   G+
Sbjct: 288 LAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  + + + E G+ P    YNAL+    K     +AE +   M + G+ P++ TYS+
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID +   G+ ++A   L EM     KP+ + Y+ ++ G+   G+      ++ EM +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +EP    Y  ++  +     ++ A+  +  M  +GI P   T+ TL+   F+ G    A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF EM E    P   TYN+MI    E+         L  M  +G++P+  +Y  L  I+
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL--IH 585

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN-----SLINAFGEDQRDAEA 610
           G          CL G + +A   F     DGL   N  LN      L++ F  + +  EA
Sbjct: 586 GL---------CLTGQASEA-KVF----VDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            +V Q M   G+  D+V Y  L+   ++  K  KVF   L
Sbjct: 632 LSVCQDMGLRGVDLDLVCYGVLIDGSLK-HKDRKVFLGLL 670



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 185/447 (41%), Gaps = 54/447 (12%)

Query: 182 AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           A +++++   T +TY +L+        + KAL L  +M   G       ++ ++  L R 
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRA 520

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
             I  ++  KL+ E+    ++ +    N +I G+ + G+ SKA  FL      G+ P T 
Sbjct: 521 GLIRDAV--KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTY 578

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  +I  L  +G+  EA+   + L +   +     Y  LL G+ + G L++A  V  +M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDM 638

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              GV  D   Y +LID        +    +LKEM     KP+  IY+ ++      G++
Sbjct: 639 GLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM--------------- 466
           +  F +   M + G  P+   Y  +I+   K   ++ A     +M               
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCF 758

Query: 467 --------------------LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
                               + +G+  +T T+N LI    + GR + A EL   M   G 
Sbjct: 759 LDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGV 818

Query: 507 FPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            P   TY  MI+   E  R  DVK+   L  +M  +G+ P+ V Y TL  I+G       
Sbjct: 819 SPDCITYTTMIS---ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IHGC------ 867

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPS 590
              C+ G   +A      M   GLKP+
Sbjct: 868 ---CVAGEMGKATELRNEMLRQGLKPN 891



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 12/338 (3%)

Query: 313 SGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           S R ++   VF+ +  +  L P  +  +ALL G VK  +   A  +  +M   G+ PD +
Sbjct: 169 SRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVY 228

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ +I +         A+ ++ +ME +    N   Y+ ++ G   + +      + K++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
               ++PD   Y  ++    K       +   D ML     P     ++L++   K G+ 
Sbjct: 289 AGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKV 348

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A  L + + E G  P    YN +I+ L +   +++ + L   M   GL PN VTY+ L
Sbjct: 349 EEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D++ + G+ D A+  L  + D            GLKPS    NSLIN   +    + A 
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDM-----------GLKPSVYPYNSLINGHCKFGDISAAE 457

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +++  M    L+P VVTYT+LM       K +K    Y
Sbjct: 458 SLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 149/358 (41%), Gaps = 33/358 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK-------ID- 245
           +TYN +I       ++ KA   +++M + G   D  +Y  +I  L  T +       +D 
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 246 -------------SSLLQKLYKEIE-------CDKIELDGQLLNDVIVGFAKAGDASKAM 285
                        + LL    +E +       C  + L G  L+ V  G    G      
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 286 R--FLGMAQGV---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           R  FLG+ + +   GL P    Y ++I A S +G   EA  +++ +   G  P    Y A
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ G  K G++ +AE + S+M     +P++ TY   +D            + L    +  
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG 782

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N+  Y+ ++ G+  +G  +   +++  M   GV PD   Y  MI    + N +  A+
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             ++ M  +GI PD + +NTLI      G   +A EL  EM  +G  P T T    I+
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R   +E+A  L+++M  DG   D I Y+ +I  L R N +  ++  +L+ 
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI--ELWN 846

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +    I  D    N +I G   AG+  KA          GL P T T    I+  S+S
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISNDSSS 905


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 204/434 (47%), Gaps = 9/434 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P+ +  S+  N  +    + LA++V++ + K           + L+  L    + +EA  
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVD-PFTLTTLMKGLCLKGRTFEALN 147

Query: 185 L-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L     S+      + Y  LI+   +      A+ L+ KM + G   + I Y++V+  L 
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSP 298
           +   +  +    L  E+    I +D    N +I GF  AG    A+R L  M     + P
Sbjct: 208 KEGLVTEAC--GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRP 265

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T+  ++ AL   G   EA  VF  + + GL+P   + NAL+ G+   G + +A+ V 
Sbjct: 266 DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVF 325

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M   G LP+  +YS LI+ Y      + A  +L EM   +  P++  Y+ +L G    
Sbjct: 326 DRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKS 385

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G     + +++ M++SG  PD   YNV++D + K  CL  A+A F  ++  GI P+  T+
Sbjct: 386 GRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTY 445

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N LID   K GR   A+E+F+ +  +G  P   TYNIMIN L  +   ++ + LL  M  
Sbjct: 446 NILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVD 505

Query: 539 QGLLPNVVTYTTLV 552
            G  PN VT+  LV
Sbjct: 506 DGFPPNAVTFDPLV 519



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 214/476 (44%), Gaps = 40/476 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGY-HCDFINYSLVIQSLTRTNKIDS--SLLQ 250
           ++ N L+S+  +       ++L S +   G      +  S+ I SLT   ++    S++ 
Sbjct: 56  VSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMA 115

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K+ K        +D   L  ++ G    G   +A+     A   G S     Y  +I  L
Sbjct: 116 KIVKR----GFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGL 171

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G+T +A  +  ++++ G++P    YN ++ G  K G + +A  + SEM   G+  D 
Sbjct: 172 CKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDV 231

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            TY+ LI  +  AG+++ A  +L EM +    +P+ + ++ ++      G       V  
Sbjct: 232 FTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFG 291

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   G+EPD    N +++ +    C+  A   FDRM+  G  P+ I+++TLI+ + K  
Sbjct: 292 LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVK 351

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER----WEDVKRLLGNMRAQGLLPNV 545
             D A  L  EM +R   P T TYN +++ L +  R    W+    L+  MRA G  P++
Sbjct: 352 MVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD----LVEAMRASGQAPDL 407

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA------------------------FRV 581
           +TY  L+D Y +    D A+   + + D  ++                         F++
Sbjct: 408 ITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQL 467

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           +   G +P+    N +IN    +    EA A+L  M ++G  P+ VT+  L++AL+
Sbjct: 468 LSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALL 523



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 14/348 (4%)

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +G G+ P T T   ++  L   GRT EA  +++     G       Y  L+ G  KMG  
Sbjct: 120 RGFGVDPFTLT--TLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKT 177

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           +DA  ++ +ME+ GV P+   Y++++D     G    A  +  EM       + F Y+ +
Sbjct: 178 RDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSL 237

Query: 412 LAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           + G+   G++Q   ++L EM     V PD + +N+++D   K   +  A   F  M+  G
Sbjct: 238 IHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRG 297

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           +EPD ++ N L++     G    A+E+F+ M ERG  P   +Y+ +IN   + +  ++  
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           RLL  M  + L+P+ VTY  L+D   +SGR     + +E            MR  G  P 
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEA-----------MRASGQAPD 406

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  N L++ + + +   +A A+ Q++ + G+ P++ TY  L+  L +
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 192/443 (43%), Gaps = 19/443 (4%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           SI I++L    ++  AF     ++ +   + P T   L+          +ALNL      
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G+  D + Y  +I  L +  K   ++  +L +++E   +  +  + N V+ G  K G  
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAI--ELLRKMEKGGVRPNLIMYNMVVDGLCKEGLV 212

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNA 340
           ++A        G G+     TY ++I     +G+   A  +  E+  +  ++P    +N 
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNI 272

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K+G + +A  V   M + G+ PD  + + L++ +   G    A+ V   M    
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS ++ GY          ++L EM    + PDT  YN ++D   K   + +  
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + M + G  PD IT+N L+D + K    D+A  LF+ + + G  P   TYNI+I+ L
Sbjct: 393 DLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGL 452

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  R +  K +   +  +G  PN+ TY  +++   +           EGL D+A     
Sbjct: 453 CKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR-----------EGLLDEAEALLL 501

Query: 581 VMRTDGLKPSNLALNSLINAFGE 603
            M  DG  P+ +  + L+ A  E
Sbjct: 502 EMVDDGFPPNAVTFDPLVRALLE 524



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 12/191 (6%)

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY-F 507
           T  K      A++ F RML     P  ++ N L+    K   Y     L   +  +G   
Sbjct: 29  TLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPK 88

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   T +I IN L    +      ++  +  +G   +  T TTL+              C
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGL-----------C 137

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+G + +A+N +    + G     +   +LIN   +  +  +A  +L+ M++ G++P+++
Sbjct: 138 LKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLI 197

Query: 628 TYTTLMKALIR 638
            Y  ++  L +
Sbjct: 198 MYNMVVDGLCK 208


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 228/527 (43%), Gaps = 55/527 (10%)

Query: 165 LYSILIHALGRSEKL---YEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKM 219
           +++ L+ +  R  K+    E F       L P     N L++A  R + +  A  L  +M
Sbjct: 152 VFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM 211

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G + D     +V+++  +  K +   ++K +KE +   +E+D    + ++    +  
Sbjct: 212 VERGIYGDCYTLHVVMRACMKEGKFEE--VEKFFKEAKGRGLEVDAAAYSILVQAVCRRL 269

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D + A   L   +  G  P   TY AVI A    G  +EA  + +E+   GL        
Sbjct: 270 DLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTR 329

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +L+KGY  +G +  A  +  E+   GV+PD   +S+LI+  +  G  E A  +   M++ 
Sbjct: 330 SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM 389

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKE----------------------------- 430
             +PN FI + +L G+ ++   +  + +  E                             
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEAC 449

Query: 431 -----MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
                M S G+ P    YN +I    K  C+  A +    +L  G++P+ +T+  LID  
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
           FK G  +RA  +FE+M      P   T+N +IN LG+  R  + +  L N   QG +   
Sbjct: 510 FKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTS 569

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +TY +++D     G F       EG  D A+ A+R M   G+ P  +   SLI+   +  
Sbjct: 570 ITYNSIID-----GFFK------EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           +   A  +   MK  G+K DVV Y+ L+       K H + S+  FF
Sbjct: 619 KIGLALEMHSDMKYKGMKLDVVAYSALIDGFC---KMHDMESASKFF 662



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 23/491 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YSIL+ A+ R   L  A  L +  R      +  TY A+I AC +  +  +AL L  +M 
Sbjct: 258 YSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMV 317

Query: 221 QDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   + I    V +SL +   +  D +L  +L+ E+    +  D  + + +I G +K 
Sbjct: 318 SVGLPMNVI----VTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKV 373

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD  KA       + +G+ P      +++           A  +F+E  E G+      Y
Sbjct: 374 GDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTY 432

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LLK   ++G + +A  +  +M   G+ P   +Y+ LI  +   G  + A  +LK +  
Sbjct: 433 NILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN+  Y+ ++ G+  +G+ +R F V ++M ++ + P  H +N +I+  GK   +  
Sbjct: 493 RGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSE 552

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                +  + +G    +IT+N++ID  FK G  D A   + EM E G  P   TY  +I+
Sbjct: 553 TQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLID 612

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  +      +  +M+ +G+  +VV Y+ L+D + +    + A +    L D     
Sbjct: 613 GLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI---- 668

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  GL P+ +  NS+I+ F        A  + Q M +N +  D+  YT+++  L++
Sbjct: 669 -------GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLK 721

Query: 639 VDKFHKVFSSY 649
             K       Y
Sbjct: 722 EGKLSLALDLY 732



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/482 (23%), Positives = 218/482 (45%), Gaps = 21/482 (4%)

Query: 164 LLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLTY--NALISACARNDDLEKALNLMSK 218
           +++S+LI+    +G  EK YE +   +   + P  +  N+L+      + LE A  L  +
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             + G   + + Y+++++ L    K++ +    L++++    I       N++I+G  K 
Sbjct: 421 AVEHGI-TNVVTYNILLKWLGELGKVNEAC--NLWEKMVSKGITPSLVSYNNLILGHCKK 477

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   KA   L      GL P   TY  +I      G +  A  VFE++  + + P    +
Sbjct: 478 GCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTF 537

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N ++ G  K G + + +  ++   + G +    TY+ +ID +   G  +SA +  +EM  
Sbjct: 538 NTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE 597

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+   Y+ ++ G     +     ++  +MK  G++ D   Y+ +ID F K + +  
Sbjct: 598 SGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMES 657

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC-TTTYNIMI 517
           A   F  +L  G+ P+T+ +N++I         + A  L +EM  +   PC    Y  +I
Sbjct: 658 ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI-KNKVPCDLQVYTSII 716

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L ++ +      L   M ++ ++P++V YT L++    +G+ ++A + L         
Sbjct: 717 GGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKIL--------- 767

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             + M  + + PS L  N LI     +    EAF +   M + GL PD  TY  L+   +
Sbjct: 768 --KEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 825

Query: 638 RV 639
           +V
Sbjct: 826 KV 827



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 201/481 (41%), Gaps = 16/481 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLY 180
            VP  +  S+L N CS    ++ AY + + ++   +  +  ++ S+L   H     E  Y
Sbjct: 356 VVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAY 415

Query: 181 EAFLLSQRQRLT-PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
             F  +    +T  +TYN L+        + +A NL  KM   G     ++Y+ +I    
Sbjct: 416 GLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +   +D +    + K I    ++ +      +I GF K GD+ +A           ++P 
Sbjct: 476 KKGCMDKA--YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPT 533

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  VI  L  +GR  E +       + G    +  YN+++ G+ K G +  A     
Sbjct: 534 DHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYR 593

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM  SG+ PD  TY+ LID    + +   A  +  +M+    K +   YS ++ G+    
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMH 653

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   +   E+   G+ P+T  YN MI  F   N +  A+     M+   +  D   + 
Sbjct: 654 DMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYT 713

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I    K G+   A +L+ EM  +   P    Y ++IN L    + E+  ++L  M   
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGN 773

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            + P+V+ Y  L+     +G F       EG   +A      M   GL P +   + L+N
Sbjct: 774 NITPSVLVYNILI-----AGNFR------EGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822

Query: 600 A 600
            
Sbjct: 823 G 823



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 200/479 (41%), Gaps = 48/479 (10%)

Query: 199 LISACARNDDLEKALNLMSKM-RQDGY--HCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           L++  +   + + AL    ++ R+ G+    DFI  SL+I  L+  +K  SSL       
Sbjct: 64  LVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFI--SLLIHILSSNSKTCSSL------- 114

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                      LLN+ + G A           L  +   G    +  +  ++ +     +
Sbjct: 115 ---------QFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNK 165

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A   F  + E  L P     N LL   V+   + DA  +  EM   G+  D +T  +
Sbjct: 166 ITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHV 225

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           ++ A    G++E      KE +    + ++  YS ++     R +     ++LKEM+  G
Sbjct: 226 VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P    Y  +I    K      A+   D M+S G+  + I   +L+  +   G  + A 
Sbjct: 286 WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF+E+ E G  P    ++++IN   +    E    L   M+  G+ PNV    +L++ +
Sbjct: 346 QLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405

Query: 556 GQS-------GRFDDAIECLEGLS------------------DQAVNAFRVMRTDGLKPS 590
            +        G FD+A+E   G++                  ++A N +  M + G+ PS
Sbjct: 406 HEQNLLEHAYGLFDEAVE--HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            ++ N+LI    +     +A+++L+ + E GLKP+ VTYT L+    +     + F  +
Sbjct: 464 LVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 160/364 (43%), Gaps = 9/364 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +++L+   C     +D AY+++  + +  L     + Y++LI      G SE+ +  F  
Sbjct: 467 YNNLILGHCKK-GCMDKAYSMLKSILERGL-KPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524

Query: 186 SQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                + P   T+N +I+   +   + +  + ++   + G+    I Y+ +I    +   
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +DS+LL   Y+E+    I  D      +I G  K+     A+      +  G+      Y
Sbjct: 585 VDSALLA--YREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAY 642

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           +A+I           A   F EL + GL P T  YN+++ G++ +  ++ A  +  EM +
Sbjct: 643 SALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           + V  D   Y+ +I      G+   A  +  EM      P+  +Y+ ++ G  + G+ + 
Sbjct: 703 NKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLEN 762

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++LKEM  + + P    YN++I    +   L  A    D ML +G+ PD  T++ L++
Sbjct: 763 ASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822

Query: 484 CHFK 487
              K
Sbjct: 823 GKLK 826


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 174/362 (48%), Gaps = 4/362 (1%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR + +++ +  ++++      +TY  LI  C R  D  KA  L  +M +       + Y
Sbjct: 172 GRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIY 231

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           +++I+ L   ++I  +  + +++ +    +  +    N ++ G+ K     KA+      
Sbjct: 232 TILIRGLCGESRISEA--ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
            G GL P   T+  +I  L  +   + A     ++   G+ P    YN L+ GY K G L
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  + SE+E+  +LPD  TYS+LI       R E A  +L+EM+     PN+  Y+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY   G  ++  +V  +M   G+EP+   ++ +ID + K   +  AM  +  M+ +G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD + +  LID HFK G    A  L +EMQE G  P   T + +I+ L +  R  D  +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 532 LL 533
           L 
Sbjct: 530 LF 531



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 198/432 (45%), Gaps = 24/432 (5%)

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI----NYSLVIQSLTRTN 242
           +  + TP  +  LI A +    +E+AL +  KM       D +      ++V+  L +  
Sbjct: 120 ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM-------DVLPAMQACNMVLDGLVKKG 172

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           + D+  + K+Y ++       +      +I G  + GD  KA R         + P    
Sbjct: 173 RFDT--MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L    R  EAE++F  ++ SG+ P    YN ++ GY K+ ++K A  +  EM 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+LP+  T+ +LID         SAR  L +M      PN F+Y+ ++ GY   G   
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +  E++   + PD   Y+++I      + +  A      M  +G  P+ +T+NTLI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D + K G  ++A E+  +M E+G  P   T++ +I+   +  + E    L   M  +GLL
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+VV YT L+D     G F D      G + +A    + M+  GL P+   L+ LI+   
Sbjct: 471 PDVVAYTALID-----GHFKD------GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519

Query: 603 EDQRDAEAFAVL 614
           +D R ++A  + 
Sbjct: 520 KDGRISDAIKLF 531



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 179/385 (46%), Gaps = 11/385 (2%)

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           Q  N V+ G  K G      +  G     G SP   TY  +I      G  ++A  +F+E
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDE 218

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E  + P    Y  L++G      + +AE +   M  SG+LP+ +TY+ ++D Y     
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  + +EM      PN   +  ++ G     E     + L +M S GV P+   YN 
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID + K   L  A++    +    I PD  T++ LI       R + A+ L +EM+++G
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TYN +I+   ++   E    +   M  +G+ PN++T++TL+D Y ++G+ + A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
               GL  + V         GL P  +A  +LI+   +D    EAF + + M+E GL P+
Sbjct: 459 ----GLYTEMV-------IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYL 650
           V T + L+  L +  +       +L
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 32/371 (8%)

Query: 306 VITALSNSGRTIEAEAVFE---ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +I  L NS R+    +VF     L+ S   P    +  L+  + +MG +++A +V  +M+
Sbjct: 96  LIQCLQNSRRSRICCSVFNVLSRLESSKFTP--NVFGVLIIAFSEMGLVEEALWVYYKMD 153

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              VLP     ++++D     GR+++   V  +M    A PN   Y  ++ G   +G++ 
Sbjct: 154 ---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           + F++  EM    + P    Y ++I      + +  A + F  M + G+ P+  T+NT++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D + K     +A EL++EM   G  P   T+ I+I+ L + +     ++ L +M + G++
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIEC-------------------LEGLS-----DQAVNA 578
           PN+  Y  L+D Y ++G   +A+                     ++GL      ++A   
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+  G  P+ +  N+LI+ + ++    +A  V   M E G++P+++T++TL+    +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 639 VDKFHKVFSSY 649
             K       Y
Sbjct: 451 AGKMEAAMGLY 461



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 154/305 (50%), Gaps = 7/305 (2%)

Query: 164 LLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ILI  L    ++ EA   F   +   + P   TYN ++    +   ++KAL L  +
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  DG   + + + ++I  L +T+++ S+  +K   ++    +  +  + N +I G+ KA
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSA--RKFLIDMASFGVVPNIFVYNCLIDGYCKA 346

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ S+A+      +   + P   TY+ +I  L    R  EA+ + +E+K+ G  P    Y
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTY 406

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ GY K G ++ A  V S+M   G+ P+  T+S LID Y  AG+ E+A  +  EM +
Sbjct: 407 NTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ ++ G+   G  +  F++ KEM+ +G+ P+    + +ID   K   +  
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISD 526

Query: 459 AMAAF 463
           A+  F
Sbjct: 527 AIKLF 531



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 94/206 (45%), Gaps = 14/206 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +++ ++ISA   N    KAL L  +M+ D    D +  ++ + +      +D    + ++
Sbjct: 698 ISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMG--EWIH 755

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             I    ++ D  L N +I  ++K G+   A RF        + P   T+  V+ A S++
Sbjct: 756 AYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHA 809

Query: 314 GRTIEAEAVFEELKES-GLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEH 371
           G   E +  F  +KE   L+PR   +  ++    + G L +A EF++    +  V P+  
Sbjct: 810 GLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFIL----KMPVRPNAV 865

Query: 372 TYSLLIDAYANAGRWESARIVLKEME 397
            +  L+ A +  G W+   +V  +++
Sbjct: 866 VWRTLLGACSLQGMWDKKMLVRNQIK 891



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 10/209 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           S    ++ +VI+A  ++ R  +A  +F +++   ++P        L     +G L   E+
Sbjct: 694 SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + + +   G+  D    + LI+ Y+  G   +AR        S   PN   +  +L    
Sbjct: 754 IHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR------RFSLVLPNDVTFMGVLMACS 807

Query: 417 DRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
             G  +   Q  + MK    + P    +  M+D   +   L  A   ++ +L   + P+ 
Sbjct: 808 HAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNA 864

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           + W TL+      G +D+   +  ++++R
Sbjct: 865 VVWRTLLGACSLQGMWDKKMLVRNQIKQR 893


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 199/441 (45%), Gaps = 13/441 (2%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +T+N L+S       +  A+ L  +M + G+  D I YS +I  L +    ++++  +
Sbjct: 9   TLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMG--NTTMALQ 66

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L K++E    + +    N +I    K    ++AM F       G+ P   TY++++    
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           N GR  EA ++F+++ E  + P    +  L+ G  K   + +A  V   M   G+ PD +
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L+D Y +  + + A+ +   M+     PN   Y+ ++ G+   G       +L EM
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
               + PD   Y+ ++  F +      A      M S G+ P+ IT++ ++D   K G  
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A EL + MQE    P    Y I+I  +    + E  + L  N+  +G+ P VVTYT +
Sbjct: 307 DEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVM 366

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +     SG          GLS++A   FR M  +G  P++   N +I  F  +     A 
Sbjct: 367 I-----SGLLKG------GLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415

Query: 612 AVLQYMKENGLKPDVVTYTTL 632
            +++ M   G   D  T+  L
Sbjct: 416 RLIEEMVGKGFSADSSTFRML 436



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 180/374 (48%), Gaps = 17/374 (4%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N ++ G         A++       +G  P   TY+ +I  L   G T  A  + ++++
Sbjct: 13  FNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKME 72

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E G KP   AYN ++    K   + +A    SEM + G+ PD  TYS ++  + N GR  
Sbjct: 73  EKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVN 132

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  + K+M   +  PN   ++ ++ G   +      + V + M   G+EPD + YN ++
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALV 192

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D +   + +  A   F+ M  +G  P+  ++N LI+ H K GR D A+ L  EM  +   
Sbjct: 193 DGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLT 252

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY+ ++    +  R ++ + LL  M + GLLPN++TY+ ++D   + G  D+A E 
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFEL 312

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA---FGEDQRDAEAFAVLQYMKENGLKP 624
           L           + M+   ++P+      LI     FG+ +   E F+ L ++K  G++P
Sbjct: 313 L-----------KAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL-FVK--GIQP 358

Query: 625 DVVTYTTLMKALIR 638
            VVTYT ++  L++
Sbjct: 359 TVVTYTVMISGLLK 372



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 178/362 (49%), Gaps = 13/362 (3%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +GL P   T+  +++ L +  + ++A  +F+E+ + G +P    Y+ ++ G  KMG    
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ +ME  G  P+   Y+ +ID+         A     EM      P+ F YS IL 
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+ + G       + K+M    V P+   + ++ID   K   +  A   F+ M  +G+EP
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+N L+D +    + D A++LF  M  +G  P   +YNI+IN   +  R ++ K LL
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  + L P++ TY+TL+  + Q GR  +A E L           + M + GL P+ + 
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL-----------KEMCSYGLLPNLIT 292

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + +++   +     EAF +L+ M+E+ ++P++  YT L++ +    K     +  LF N
Sbjct: 293 YSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEA--ARELFSN 350

Query: 654 IY 655
           ++
Sbjct: 351 LF 352



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 11/281 (3%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M + G+ P   T++ L+    +  +   A  +  EM     +P+   YS I+ G    G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                Q+LK+M+  G +P+   YN +ID+  K   +  AM  F  M+ EGI PD  T+++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++      GR + A  LF++M ER   P   T+ I+I+ L ++    +   +   M  +G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           L P+V TY  LVD Y           C     D+A   F +M   G  P+  + N LIN 
Sbjct: 181 LEPDVYTYNALVDGY-----------CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +  R  EA  +L  M    L PD+ TY+TLM+   +V +
Sbjct: 230 HCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 238/554 (42%), Gaps = 108/554 (19%)

Query: 166  YSILIHALGRSEKLYEAFLL--SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LG++ K+ EA  L     Q+  P   +T+N L     +ND++  AL ++ KM 
Sbjct: 578  YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
              G   D   Y+ +I  L +  ++  ++    ++ K +  D + L       ++ G  KA
Sbjct: 638  DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL-----CTLLPGVVKA 692

Query: 279  G---DASKAM-RFL-----------------------GMAQGVGLSPKTATYAAVITALS 311
            G   DA K +  FL                       G+   V  S +      V   + 
Sbjct: 693  GLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERL-----VANGIC 747

Query: 312  NSGRTI---------------EAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAE 355
              G +I                A  +FE+  K+ G++P+   YN L+ G ++   ++ A+
Sbjct: 748  RDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 807

Query: 356  FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG- 414
             V  +++ +G +PD  TY+ L+DAY  +G+ +    + KEM     +PN+  ++ +++G 
Sbjct: 808  DVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGL 867

Query: 415  ----------------YRDR-------------------GEWQRTFQVLKEMKSSGVEPD 439
                              DR                   G      Q+ + M   G  P+
Sbjct: 868  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927

Query: 440  THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
               YN++I+ FGK      A A F RM+ EG+ PD  T++ L+DC    GR D     F 
Sbjct: 928  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR 987

Query: 500  EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQS 558
            E++E G  P    YN++IN LG+  R E+   L   M +++G+ P++ TY +L+   G  
Sbjct: 988  ELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG-- 1045

Query: 559  GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                     + G+ ++A   +  ++  GL+P+    N+LI  +    +   A+AV Q M 
Sbjct: 1046 ---------IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1096

Query: 619  ENGLKPDVVTYTTL 632
              G  P+  TY  L
Sbjct: 1097 TGGFSPNTGTYEQL 1110



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 213/473 (45%), Gaps = 15/473 (3%)

Query: 174 GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G+ E++   F L Q++  +    TY  +    +    L +A   + KMR+ G+  +  +Y
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSY 193

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + +I  L ++     ++  ++Y+ +  D      Q  + ++VG  K  D    M  L   
Sbjct: 194 NGLIHLLLKSRFCTEAM--EVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEM 251

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           + +GL P   T+   I  L  +G+  EA  + + + + G  P    Y  L+        L
Sbjct: 252 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 311

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A+ V ++M+     PD  TY  L+D +++    +S      EME     P+   ++ +
Sbjct: 312 DCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTIL 371

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G +   F  L  M+  G+ P+ H YN +I    + + L  A+  FD M S G+
Sbjct: 372 VDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGV 431

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +P   T+   ID + K G    A E FE+M+ +G  P     N  +  L +  R  + K+
Sbjct: 432 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 491

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           +   ++  GL+P+ VTY  ++  Y + G  D+AI+ L  + +              +P  
Sbjct: 492 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCC-----------EPDV 540

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + +NSLIN   +  R  EA+ +   MKE  LKP VVTY TL+  L +  K  +
Sbjct: 541 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 234/499 (46%), Gaps = 32/499 (6%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           YS L+  LG+   +     LL + + L       T+   I    R   + +A  ++ +M 
Sbjct: 228 YSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 287

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D + Y+++I +L    K+D +  ++++ +++  + + D      ++  F+   D
Sbjct: 288 DEGCGPDVVTYTVLIDALCTARKLDCA--KEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +F    +  G  P   T+  ++ AL  +G   EA A  + +++ G+ P    YN 
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G +++  L DA  +   ME  GV P  +TY + ID Y  +G   SA    ++M+   
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465

Query: 401 AKPN-----SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
             PN     + +YS   AG RDR E ++ F  LK++   G+ PD+  YN+M+  + K   
Sbjct: 466 IAPNIVACNASLYSLAKAG-RDR-EAKQIFYGLKDI---GLVPDSVTYNMMMKCYSKVGE 520

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+     M+    EPD I  N+LI+  +K  R D A ++F  M+E    P   TYN 
Sbjct: 521 IDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 580

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           ++  LG+  + ++   L   M  +G  PN +T+ TL D   ++     A++ L       
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML------- 633

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F++M   G  P     N++I    ++ +  EA      MK+  + PD VT  TL+  
Sbjct: 634 ---FKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 688

Query: 636 LIR---VDKFHKVFSSYLF 651
           +++   ++  +K+ +++L+
Sbjct: 689 VVKAGLIEDAYKIIANFLY 707



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 18/406 (4%)

Query: 125  PAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK----- 178
            PA L W  L+ ++ +  + ID A +    L  + +C   +   SIL+  +  S K     
Sbjct: 713  PANLFWEDLMGSILAE-AGIDNAVSFSERLVANGICRDGD---SILVPIIRYSFKHNNAS 768

Query: 179  ----LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
                L+E F      +    TYN LI      D +E A ++  +++  G   D   Y+ +
Sbjct: 769  GARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFL 828

Query: 235  IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQG 293
            + +  ++ KID   L ++YKE+   + E +    N VI G  KAG+   A+  +  +   
Sbjct: 829  LDAYGKSGKIDE--LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSD 886

Query: 294  VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
               SP   TY  +I  LS SGR  EA+ +FE + + G +P    YN L+ G+ K G    
Sbjct: 887  RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADA 946

Query: 354  AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            A  +   M + GV PD  TYS+L+D     GR +      +E++ S   P+   Y+ I+ 
Sbjct: 947  ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIIN 1006

Query: 414  GYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G       +    +  EMK S G+ PD + YN +I   G    +  A   ++ +   G+E
Sbjct: 1007 GLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1066

Query: 473  PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            P+  T+N LI  +   G+ + A  +++ M   G+ P T TY  + N
Sbjct: 1067 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 134/617 (21%), Positives = 271/617 (43%), Gaps = 51/617 (8%)

Query: 70   DDDDVLSLQKQRYDFTPLLNFLSENSNSESA---------SALASSPSSLNRVEFKLAES 120
            D+ + L ++   Y +   +++  ++ +S SA           +A +  + N   + LA++
Sbjct: 424  DNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 483

Query: 121  YR---------------AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL 165
             R                VP  + ++++    S    ID A  ++S + + N C    ++
Sbjct: 484  GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE-NCCEPDVIV 542

Query: 166  YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
             + LI+ L +++++ EA   F+  +  +L P  +TYN L++   +N  +++A+ L   M 
Sbjct: 543  VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 602

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            Q G   + I ++ +   L + +++  +L + L+K ++   +  D    N +I G  K G 
Sbjct: 603  QKGCPPNTITFNTLFDCLCKNDEVTLAL-KMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQ 660

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYN 339
              +AM F    + + + P   T   ++  +  +G   +A  +    L     +P    + 
Sbjct: 661  VKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWE 719

Query: 340  ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA-NAGRWESARIVLKEMEV 398
             L+   +    + +A      +  +G+  D  +  + I  Y+        AR++ ++   
Sbjct: 720  DLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTK 779

Query: 399  S-HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                +P    Y+ ++ G  +    +    V  ++K++G  PD   YN ++D +GK   + 
Sbjct: 780  DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKID 839

Query: 458  HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIM 516
                 +  M +   EP+TIT N +I    K G  D A +L+ + M +R + P   TY  +
Sbjct: 840  ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899

Query: 517  INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            I+ L +  R  + K+L   M   G  PN   Y  L++ +G++G            +D A 
Sbjct: 900  IDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE-----------ADAAC 948

Query: 577  NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              F+ M  +G++P     + L++      R  E     + +KE+GL PDVV Y  ++  L
Sbjct: 949  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL 1008

Query: 637  IRVDKFHKVFSSYLFFN 653
                KFH++  + + FN
Sbjct: 1009 ---GKFHRLEEALVLFN 1022



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 24/379 (6%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           F  +A    L   T T   ++ AL   G+  E   VF+ +++  +K  T  Y  + K   
Sbjct: 107 FKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLS 166

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L+ A F + +M   G + + ++Y+ LI     +     A  V + M +   +P+  
Sbjct: 167 VKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQ 226

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS ++ G   R + +    +LKEM++ G++P+ + + + I   G+   ++ A     RM
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             EG  PD +T+  LID      + D A+E+F +M+   + P   TY  +++   +    
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV---------- 576
           + V +    M   G +P+VVT+T LVD   ++G F +A   L+ + DQ +          
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406

Query: 577 --NAFRVMRTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                RV R D            G+KP+       I+ +G+      A    + MK  G+
Sbjct: 407 ICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 466

Query: 623 KPDVVTYTTLMKALIRVDK 641
            P++V     + +L +  +
Sbjct: 467 APNIVACNASLYSLAKAGR 485


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 210/478 (43%), Gaps = 16/478 (3%)

Query: 173 LGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           LG+++ +   F  ++    + T  TYN +I    +  D+E A  L  +M+  G   D + 
Sbjct: 111 LGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVT 170

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ +I    +  ++D ++    ++E++    E D    N +I  F K+G   K + F   
Sbjct: 171 YNSMIDGYGKVGRLDDTVY--FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYRE 228

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  GL P   +Y+ ++ A        +A   + +++  G  P    Y +L+    K+G 
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L DA  + +EM   GV  +  TY+ LID   +A R + A  +  +M  +   PN   Y+ 
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+       R  ++L E+K  G++PD   Y   I        +  A    + M   G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I+ +T+ + TL+D +FK G       L EEMQE  +     T+ ++I+ L + +      
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 531 RLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
              G M    GL PN   YT ++D             C E     A   F  M  +GL P
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGL-----------CKENQVKAATTLFEQMAQEGLVP 517

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
              A  SL++   +     EA A+   M E G+K D++ YT+L+    + ++  K  S
Sbjct: 518 DRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARS 575



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 168/341 (49%), Gaps = 11/341 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           PKT +   ++   +  G+T   +  F+++  +G KP    YN ++    K G ++ A  +
Sbjct: 96  PKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGL 155

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             EM+  G++PD  TY+ +ID Y   GR +      +EM+    +P+   Y+ ++  +  
Sbjct: 156 FEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCK 215

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+  +  +  +EMK SG++P+   Y+ ++D F K + +  A+  +  M   G  P+  T
Sbjct: 216 SGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFT 275

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + +L+D + K G    A  L  EM E G      TY  +I+ L + ER ++ ++L G M 
Sbjct: 276 YTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G++PN+ +Y  L+  + ++   D A+E L  L  +           G++P  L   + 
Sbjct: 336 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR-----------GIQPDLLLYGTF 384

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           I      ++   A  V+  M+ENG+K + + YTTLM A  +
Sbjct: 385 IWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFK 425



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 178/430 (41%), Gaps = 60/430 (13%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++  FAK G      RF     G G  P   TY  +I  +   G    A  +FEE+K 
Sbjct: 102 NGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKF 161

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P T  YN+++ GY K+G L D  +   EM+     PD  TY+ LI+ +  +G+   
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDR------------------------------ 418
                +EM+ S  KPN   YS ++  +                                 
Sbjct: 222 GLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVD 281

Query: 419 -----GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G     F++  EM   GVE +   Y  +ID       +  A   F +M++ G+ P
Sbjct: 282 ANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +  ++N LI    K    DRA EL  E++ RG  P    Y   I  L   E+ E  K ++
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVM 401

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD-------------------- 573
             M+  G+  N + YTTL+D Y +SG   + +  LE + +                    
Sbjct: 402 NEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKN 461

Query: 574 ----QAVNAFRVMRTD-GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
               +A++ F  M  D GL+P+     ++I+   ++ +   A  + + M + GL PD   
Sbjct: 462 KLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTA 521

Query: 629 YTTLMKALIR 638
           YT+LM   ++
Sbjct: 522 YTSLMDGNLK 531



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 171/352 (48%), Gaps = 26/352 (7%)

Query: 317 IEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +E   VF+EL    +   P    ++AL    + +G L++A    S+M+R  V P   + +
Sbjct: 43  LEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+  +A  G+ +  +   K+M  + +KP  F Y+ ++      G+ +    + +EMK  
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PDT  YN MID +GK   L   +  F+ M S   EPD IT+N+LI+C  K G+  + 
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E + EM++ G  P   +Y+ +++   +++  +   +   +MR  G +PN  TYT+LVD 
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDA 282

Query: 555 YGQSGRFDDAIE-------------------CLEGLSD-----QAVNAFRVMRTDGLKPS 590
             + G   DA                      ++GL D     +A   F  M T G+ P+
Sbjct: 283 NCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             + N+LI+ F + +    A  +L  +K  G++PD++ Y T +  L  ++K 
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKI 394



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 13/382 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LI+   ++  L K L    +M+Q G   + ++YS ++ +  + + +  ++  K Y
Sbjct: 204 ITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI--KFY 261

Query: 254 KEIECDKIELDGQLLND-----VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             ++  ++   G + N+     ++    K G+ S A R       VG+     TY A+I 
Sbjct: 262 --VDMRRV---GHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L ++ R  EAE +F ++  +G+ P   +YNAL+ G+VK   +  A  +++E++  G+ P
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D   Y   I       + E+A++V+ EM+ +  K N+ IY+ ++  Y   G       +L
Sbjct: 377 DLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLL 436

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDCHFK 487
           +EM+    E     + V+ID   K   +  A+  F RM ++ G++P+   +  +ID   K
Sbjct: 437 EEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCK 496

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             +   A  LFE+M + G  P  T Y  +++   +Q    +   L   M   G+  +++ 
Sbjct: 497 ENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLA 556

Query: 548 YTTLVDIYGQSGRFDDAIECLE 569
           YT+LV  + Q  +   A   LE
Sbjct: 557 YTSLVWGFSQCNQLQKARSFLE 578



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 21/217 (9%)

Query: 444 NVMIDTFGKYNCL----------HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           NV +  FG ++ L            A   F +M    + P T + N L+    K G+ D 
Sbjct: 57  NVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDG 116

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            +  F++M   G  P   TYNIMI+ + ++   E  + L   M+ +GL+P+ VTY +++D
Sbjct: 117 VKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMID 176

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            YG+ GR DD            V  F  M++   +P  +  NSLIN F +  +  +    
Sbjct: 177 GYGKVGRLDDT-----------VYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            + MK++GLKP+VV+Y+TL+ A  + D   +    Y+
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYV 262



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 43/295 (14%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L  +E++ EA  L  +     +     +YNALI    +  ++++AL L+++++
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 370

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + Y   I  L    KI+++  + +  E++ + I+ +  +   ++  + K+G+
Sbjct: 371 GRGIQPDLLLYGTFIWGLCGLEKIEAA--KVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428

Query: 281 -----------------------------------ASKAMRFLG-MAQGVGLSPKTATYA 304
                                               SKA+ + G M+   GL P  A Y 
Sbjct: 429 PTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYT 488

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A+I  L    +   A  +FE++ + GL P   AY +L+ G +K G + +A  +  +M   
Sbjct: 489 AMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEI 548

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           G+  D   Y+ L+  ++   + + AR  L+EM      P+  +   +L  + + G
Sbjct: 549 GMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELG 603



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 51/254 (20%), Positives = 116/254 (45%), Gaps = 10/254 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLS 186
           L+ + +  LC     I+ A  V++ +Q++ +  +  L+Y+ L+ A  +S    E   LL 
Sbjct: 380 LYGTFIWGLCGL-EKIEAAKVVMNEMQENGI-KANTLIYTTLMDAYFKSGNPTEGLHLLE 437

Query: 187 QRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRT 241
           + Q L    T +T+  LI    +N  + KA++   +M  D G   +   Y+ +I  L + 
Sbjct: 438 EMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKE 497

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           N++ ++    L++++  + +  D      ++ G  K G+  +A+        +G+     
Sbjct: 498 NQVKAA--TTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLL 555

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y +++   S   +  +A +  EE+    + P       +LK + ++G + +A  + S +
Sbjct: 556 AYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYL 615

Query: 362 ERSGVLPDEHTYSL 375
            +  +L  ++  +L
Sbjct: 616 MKHQLLTSDNNNAL 629


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 197/436 (45%), Gaps = 16/436 (3%)

Query: 203  CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
            C + DD   A  L  +M Q       ++++ V+ ++ + NK D  ++  L+ ++E   I 
Sbjct: 593  CIKFDD---AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFD--IVIYLFHKMENLGIS 647

Query: 263  LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
             D      +I  F +    S A+  LG    +G  P   T  +++       R  EA ++
Sbjct: 648  HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSL 707

Query: 323  FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
             + + E GL+P    YN ++ G  K   L +A  +   ME+ G++ D  TY+ LI    N
Sbjct: 708  VDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCN 767

Query: 383  AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            +GRW  A  +L++M      PN   ++ ++  +   G       + KEM    V P+   
Sbjct: 768  SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILT 827

Query: 443  YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            YN +I+ F     L  A   FD M+S+G  PD +T+NTLI    K  R +   +LF EM 
Sbjct: 828  YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 503  ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             +G      TYN +I+   +  +    +++   M   G+ P++VTY  L+D    +G+ +
Sbjct: 888  HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947

Query: 563  DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
             A+  +E L    ++              +  N +I     + +  EA+ + + +   G+
Sbjct: 948  KALVMVEDLQKNQMDV-----------DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 623  KPDVVTYTTLMKALIR 638
            K D + Y T++  L R
Sbjct: 997  KLDAIAYITMISGLCR 1012



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 25/369 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+S    ++  +I       R   A ++  ++ + G  P    + +LL G+     + DA
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-YSRILA 413
             +V+ M +SG  P+   Y+ LID     G    A  +L EME         + Y+ +L 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    GEW++  ++L++M    + PD   +  +ID F K   L  A   + +ML   I P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +T+T+N+LI+     GR   A++ F+ M  +G FP   TYN +IN   +  R ED  +L 
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M  +GL+ +  TY TL+  Y Q G+   A +                        C+ 
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G    A+  F  MR+       +A N +I+   +  +  EA+ +   +   G+KPD  TY
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 630 TTLMKALIR 638
           T ++  L +
Sbjct: 455 TIMILGLCK 463



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 11/418 (2%)

Query: 147  YAVVSWL--QKHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNA 198
            + +V +L  +  NL  S++L  ++ILIH   R  +   A  LL +  +L    + +T  +
Sbjct: 631  FDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGS 690

Query: 199  LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
            L++   + +  ++A++L+  M + G   + + Y+ VI  L +   ++++L  +++  +E 
Sbjct: 691  LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL--EIFYGMEK 748

Query: 259  DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
              I  D    N +I G   +G  + A R L       + P    + A+I      G  +E
Sbjct: 749  KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 808

Query: 319  AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
            A+ +++E+    + P    YN+L+ G+   G L DA+ +   M   G  PD  TY+ LI 
Sbjct: 809  AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868

Query: 379  AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
             +  + R E    +  EM       ++F Y+ ++ GY   G+     +V   M   GV P
Sbjct: 869  GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPP 928

Query: 439  DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
            D   YN+++D       +  A+   + +    ++ D IT+N +I    +  +   A  LF
Sbjct: 929  DIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLF 988

Query: 499  EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT-TLVDIY 555
              +  +G       Y  MI+ L       +  +L   M+  G +P+   Y  TL D Y
Sbjct: 989  RSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 197/439 (44%), Gaps = 27/439 (6%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
            E AL+L  +M Q       ++++ ++ ++    + ++ +     +++E   I  D    
Sbjct: 46  FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIY--FSQQMELFGISHDLYSF 103

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I  F +    S A+  LG    +G  P   T+ +++       R  +A ++   + +
Sbjct: 104 TILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP-DEHTYSLLIDAYANAGRWE 387
           SG +P    YN L+    K G +  A  +++EME+ G L  D  TY+ L+     +G W 
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +L++M      P+ F ++ ++  +  +G      ++ K+M  S + P+T  YN +I
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +    +  L+HA   FD M S+G  P+ +T+NTLI+   K  R +   +LF+ M   G  
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD---IYGQSG----R 560
             T TYN +I+   +  +    K +   M + G+ P+++T+  L+    + G+ G    +
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK 403

Query: 561 FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           F+D                    C     ++A   F  +  +G+KP       +I    +
Sbjct: 404 FNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463

Query: 604 DQRDAEAFAVLQYMKENGL 622
           +    EA  + + MKE+G+
Sbjct: 464 NGPRREADELFRRMKEDGI 482



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 29/343 (8%)

Query: 329 SGLKPRTKAYNA----LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           SG     +AY+     L  G++     +DA  +  EM +S  LP    ++ L+ A AN  
Sbjct: 20  SGGGASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLR 79

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R+E+     ++ME+     + + ++ ++  +           +L +M   G +P    + 
Sbjct: 80  RYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFG 139

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            ++  F   N +H A +    M+  G EP+ + +NTLIDC  K G  + A EL  EM+++
Sbjct: 140 SLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK 199

Query: 505 GYFPC-TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           G       TYN ++  L     W    R+L +M  + + P+V T+T L+D + + G  D+
Sbjct: 200 GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDE 259

Query: 564 AIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A E                        C+ G    A   F +M + G  P+ +  N+LIN
Sbjct: 260 AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLIN 319

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            F + +R  +   + Q M   GL  D  TY TL+    +V K 
Sbjct: 320 GFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 174/398 (43%), Gaps = 22/398 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKL 252
           ++  LI    R   L  AL+++ KM + GY    + +  ++      N+I    SL+  +
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAVITALS 311
            K       E +  + N +I    K GD + A+  L   +  G L+    TY  ++T L 
Sbjct: 162 VKS----GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG   +A  +  ++ +  + P    + AL+  +VK G L +A+ +  +M +S + P+  
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ LI+     GR   A+     M      PN   Y+ ++ G+      +   ++ + M
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC--G 489
              G+  DT  YN +I  + +   L  A   F  M+S G+ PD IT   L+  H  C  G
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL--HGLCVNG 395

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A   F +M+    +     YNIMI+ L + ++ E+   L   +  +G+ P+  TYT
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
            +  I G          C  G   +A   FR M+ DG+
Sbjct: 456 IM--ILGL---------CKNGPRREADELFRRMKEDGI 482



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 174/384 (45%), Gaps = 10/384 (2%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ILIH   R  +L  A  +L +  +L    + +T+ +L+      + +  A +L++ M 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL--NDVIVGFAKA 278
           + GY  + + Y+ +I  L +   ++ +L  +L  E+E  K  L   L+  N ++ G   +
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIAL--ELLNEME-KKGRLAADLVTYNTLLTGLCYS 219

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+  +A R L       ++P   T+ A+I A    G   EA+ +++++ +S + P T  Y
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+L+ G    G L  A+     M   G  P+  TY+ LI+ +  + R E    + + M  
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                ++F Y+ ++ GY   G+ +    +   M S GV PD   + +++        +  
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  F+ M S       + +N +I    K  + + A ELF  +   G  P   TY IMI 
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459

Query: 519 LLGEQERWEDVKRLLGNMRAQGLL 542
            L +     +   L   M+  G++
Sbjct: 460 GLCKNGPRREADELFRRMKEDGII 483



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 151/362 (41%), Gaps = 46/362 (12%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F E+ +S   P    +  +L    KM       ++  +ME  G+  D +++++LI
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             +    R+  A  +L +M     +P+      +L G+     +Q    ++  M   G+E
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI--------------- 482
           P+   YN +I+   K   L++A+  F  M  +GI  D +T+NTLI               
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 483 --------------------DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
                               D   K G    A+ L++EM  R   P   TYN +IN    
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           Q R  D K +   M ++G  P+VVTY TL+  + +S R +D ++            F  M
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK-----------LFCEM 886

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              GL       N+LI+ + +  +   A  V   M + G+ PD+VTY  L+  L    K 
Sbjct: 887 THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946

Query: 643 HK 644
            K
Sbjct: 947 EK 948



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 27/290 (9%)

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           +++ A  +  EM  S   P+   ++R+L       ++     +  +M++ G+  D + + 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I  F + +    A+A   +M+  G +P  +T  +L++   +  R+  A  L + M E 
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P    YN +IN L +     +   +   M  +G++ + VTY TL+     SGR+ DA
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 565 IECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
              L                        EG   +A N ++ M    + P+ L  NSLIN 
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFS 647
           F    R  +A  +   M   G  PDVVTY TL+       RV+   K+F 
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 181/356 (50%), Gaps = 12/356 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P + T+ A++   S  GR  + E + E +   G++P   +YN LL+G  K+    +A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 355 EFVVSEM-ERSG-VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           E +V +M  R G   PD  TYS L+  Y  AG+ E +R +LKE+     +P++ +Y++++
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           A            ++L+EM  +G  P    +N +I    +   L  A +    M + G++
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            D +T+NTL+D   K GR   AE+L E M+  G  P    Y+  +  L +  +  +  ++
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  MR     PNVVTY T++D   +SG+ D A+E +E ++           +DG   + +
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS----------SDGCGLNVV 294

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
             +++++   +  R  EA +V++ M   G +PDVVTY++L+  L +  K  +   +
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 206/452 (45%), Gaps = 19/452 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+NAL++  ++         L+  M   G   + ++Y+ +++ L +  +   +      
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA------ 64

Query: 254 KEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +E+  D I   G+   D++       G+ KAG   ++   L      GL P    Y  V+
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            +L  S R  EA  + EE+  +G  P    +N L+ G  +   L+ A+ ++  M  SGV 
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            D  TY+ L+D    AGR + A  +L+ M+ S   P+   YS  + G    G+     QV
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHF 486
           L++M+ S  +P+   YN ++D   K   +  A+   ++M  S+G   + + ++T++D   
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K GR   A  + E M   G  P   TY+ ++N L +  + E+    +  M  +G  PN V
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY +LV      GR  +A   +E +S            D   PS    N+LI    +  R
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGG------GDHCPPSVSTYNALIGGLCKAGR 418

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +A    Q M+  G  PD V+Y+T+++ L R
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 197/410 (48%), Gaps = 19/410 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           Y+ L+  L + E+ +EA      ++S+  R TP  +TY+ L+S   +   +E++  L+ +
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--LYKEIECDKIELDGQLLNDVIVGFA 276
           +   G   D + Y+ V+ SL ++ ++  +L     + +   C  +       N +I G  
Sbjct: 108 VISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTL----ITFNTLISGCC 163

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +  +   A   L      G+     TY  ++  L  +GR  EAE + E +K SG  P   
Sbjct: 164 REKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           AY++ + G  K G + +A  V+ +M  S   P+  TY+ ++D    +G+ ++A  ++++M
Sbjct: 224 AYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283

Query: 397 EVSHAKP-NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
             S     N   YS ++ G    G  Q    V++ M  +G  PD   Y+ +++   K   
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF-----PCT 510
           +  A+ A   M  EG +P+ +T+ +L+     CGR   AE + EEM   G       P  
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSV 403

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           +TYN +I  L +  R +D  +    MR+QG  P+ V+Y+T+V+   +SGR
Sbjct: 404 STYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 61/205 (29%)

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV--------------- 545
           M   G  P + T+N ++N   +Q R  D +RLL  M A+G+ PNV               
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 546 ----------------------VTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNA 578
                                 VTY+TL+  Y ++G+ +++ E L+     GL   A+  
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 579 FRVMRT-------------------DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            +VM +                    G  P+ +  N+LI+    ++    A ++LQ M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHK 644
           +G+K DVVTY TLM  L +  +  +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQE 205



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 13/201 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           ++++L  LC S   ID A  ++  +   + C    + YS ++  L   GR+++       
Sbjct: 260 YNTILDGLCKSGK-IDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R    P  +TY++L++   +   +E+A+  + +M  +G   + + Y  ++  L    +
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 244 IDSSLLQKLYKEIECDKIELDG-----QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
           +  +  +++ +E+       D         N +I G  KAG    A++F    +  G  P
Sbjct: 379 LAEA--ERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436

Query: 299 KTATYAAVITALSNSGRTIEA 319
              +Y+ ++  L+ SGR ++A
Sbjct: 437 DGVSYSTIVEGLARSGRALQA 457


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 208/479 (43%), Gaps = 36/479 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY   I +  +      AL L+  M + G   + + Y  V+  L  + + D +  ++L+ 
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA--RELFD 205

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  D    N ++    K G   ++ R LG     G+ P   T+   +  L   G
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREG 265

Query: 315 ---------RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
                    R +EAE    ++   G +P    YN+++ GY K G ++DA  V+ +    G
Sbjct: 266 ALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PDE TY  LI+ +   G  + A  V K+      +P+  +Y+ ++ G   +G      
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q++ EM  +G  P+   YN++I+   K  C+  A    D  +++G  PD  T+NTLID +
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K  + D A E+   M  +G  P   TYN ++N L +  + E+V  +   M  +G  PN+
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 546 VTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRV 581
           +TY  +VD   ++ + ++A++                        C  G  D A   FR 
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 582 MRTD-GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           M     +  +    N +++AF E      A  +   MK +G  PD  TY  ++    ++
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKM 624



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 211/479 (44%), Gaps = 32/479 (6%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALN------ 214
           ++ L+H L +   ++E+  LL +  ++ + P   T+N  +    R   L++A+       
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278

Query: 215 ---LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
               + KM   G+  D + Y+ +I    +   +  +   ++ K+      + D      +
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA--NRVLKDAVFKGFKPDEFTYCSL 336

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I GF K GD  +AM       G GL P    Y  +I  LS  G  + A  +  E+ E+G 
Sbjct: 337 INGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGC 396

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN ++ G  KMG + DA  +V +    G  PD  TY+ LID Y    + +SA  
Sbjct: 397 LPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATE 456

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           ++  M      P+   Y+ +L G    G+ +   ++ K M+  G  P+   YN+++D+  
Sbjct: 457 MVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLC 516

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC-- 509
           K   ++ A+     M S+G++PD +++ TL     K G  D A +LF  M E+ Y  C  
Sbjct: 517 KAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM-EKQYDVCHT 575

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-CL 568
           T TYNI+++   EQ       +L   M+  G  P+  TY  ++D + + G      +  L
Sbjct: 576 TATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLL 635

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           E +  + +            PS      ++N      +  EA  ++  M + G+ P+ V
Sbjct: 636 ENMEKRFI------------PSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 226/521 (43%), Gaps = 57/521 (10%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQRLT-PLTYNALISAC---ARNDDLEKALNLMSKM 219
           Y  ++  LG   +    E  L   R+ +   L   A I A     R   +++A++   +M
Sbjct: 43  YKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERM 102

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ--------KLYKEIECDKIELDGQLLNDV 271
             D Y+CD         S+   N I + L++        K+Y  +    ++ D       
Sbjct: 103 --DFYNCD--------PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I  F K      A+R L     +G       Y  V+  L +SG    A  +F+E+    L
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCL 212

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-- 389
            P   A+N L+    K G + ++E ++ ++ + GV P+  T+++ +      G  + A  
Sbjct: 213 CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR 272

Query: 390 --RIV-----LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             R+V     L++M     +P+   Y+ I+ GY  +G  Q   +VLK+    G +PD   
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFT 332

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  +I+ F K      AMA F   L +G+ P  + +NTLI    + G    A +L  EM 
Sbjct: 333 YCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMA 392

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           E G  P   TYN++IN L +     D   L+ +  A+G  P++ TY TL+D Y +  + D
Sbjct: 393 ENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLD 452

Query: 563 DAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            A E                        C  G S++ +  F+ M   G  P+ +  N ++
Sbjct: 453 SATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIV 512

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           ++  + ++  EA  +L  MK  GLKPDVV++ TL     ++
Sbjct: 513 DSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKI 553



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 156/348 (44%), Gaps = 15/348 (4%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDA 354
           L PK    AAV+   ++  + +E   +F   K E G K     Y  +++     G  ++ 
Sbjct: 5   LLPKHV--AAVVKIQTDPLKALE---MFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEM 59

Query: 355 EFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           E ++SEM E       E  Y   +  Y   G+ + A    + M+  +  P+   ++ I+ 
Sbjct: 60  EKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMN 119

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
              + G   +  +V   M+  GV+ D + Y + I +F K    + A+     M   G + 
Sbjct: 120 ILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDS 179

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + + + T++   +  G +D A ELF+EM  R   P    +N ++++L ++    + +RLL
Sbjct: 180 NAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLL 239

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA---FRVMRTDGLKPS 590
           G +  +G+ PN+ T+   V    + G  D A+      + + V A    R M   G +P 
Sbjct: 240 GKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR-----NSRVVEAEEYLRKMVNGGFEPD 294

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +L  NS+I+ + +     +A  VL+     G KPD  TY +L+    +
Sbjct: 295 DLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCK 342


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 221/476 (46%), Gaps = 37/476 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  ++ A    ++++ A  L+  M + G   + + Y  +I +L++ +++D +L  KL +
Sbjct: 212 TFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEAL--KLLE 269

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+       D    N VI GF +     +  + +      G +P   TY  ++  L  + 
Sbjct: 270 EMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTC 329

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE-FVVSEMERSGVLPDEHTY 373
           R  EA+A+  ++      P    +N L+ G+V+ G L +A  FV  +M  +G +PD  T+
Sbjct: 330 RIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTF 385

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S L++     G + SA  ++ +M+    KPN   Y+ ++ G+  +G+ +    +L+EM +
Sbjct: 386 STLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLT 445

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G   +T  YN +I    K+  +H A+  F  M S+G +PD  T+N+LI   F   R D 
Sbjct: 446 KGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLI---FGLCRVDE 502

Query: 494 AEE---LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            E+   L+ +M   G    + T+N +I+    +   ++  +L+ +M  +G   + +TY  
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562

Query: 551 LVDIYGQSGR-------FDDAIE-----------------CLEGLSDQAVNAFRVMRTDG 586
           L+    ++G        F++ I                  C  G    A+   R M   G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             P  +  NSLIN   +  R  EA  + + ++  G++PD +TY TL+  L R   F
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAF 678



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 220/516 (42%), Gaps = 53/516 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K LC  N  +D A  ++  + KH  C    ++Y  LI AL + +++ EA  L +   L
Sbjct: 216 VMKALCMVNE-VDNACLLLRDMTKHG-CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFL 273

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID- 245
                   T+N +I    R + + +   L+ +M   G+  + + Y  ++  L +T +ID 
Sbjct: 274 MGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDE 333

Query: 246 -SSLLQKL----------------------------YKEIECDKIELDGQLLNDVIVGFA 276
             +LL K+                            Y ++  +    D    + ++ G  
Sbjct: 334 AQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLC 393

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K G    A+  +      G  P   TY  +I      G+  EA  +  E+   G    T 
Sbjct: 394 KKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTV 453

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YNAL+    K G + +A  +  EM   G  PD  T++ LI         E A  + ++M
Sbjct: 454 GYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDM 513

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +     NS  ++ ++  +  RGE Q   +++ +M   G   D   YN +I    K   +
Sbjct: 514 VLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAV 573

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
              +  F+ M+ +G+ P  IT N LI+     G+   A E   +M  RG+ P   TYN +
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSL 633

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN L ++ R ++   L   ++A+G+ P+ +TY TL+    + G FDDA            
Sbjct: 634 INGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA------------ 681

Query: 577 NAFRVMRT--DGLKPSNLALNSLINAFGEDQRDAEA 610
             F + R   +G  P+++  N L+  FG+ Q ++E 
Sbjct: 682 -CFLLYRGVENGFVPNDVTWNILVYNFGK-QSNSEG 715



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 172/411 (41%), Gaps = 56/411 (13%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P +  Y  +I ALS   R  EA  + EE+   G  P    +N ++ G+ ++  + + 
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM---EVSHAK--------- 402
             +V  M   G  P++ TY  L+       R + A+ +L ++    V H           
Sbjct: 300 AKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRN 359

Query: 403 --------------------PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
                               P+ F +S ++ G   +G +    +++ +M + G +P+ + 
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y ++ID F K   L  A      ML++G   +T+ +N LI    K G+   A ++F EM 
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            +G  P   T+N +I  L   +  ED   L  +M  +G++ N VT+ TL+  + + G   
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539

Query: 563 DAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +A++                        C  G  ++ +  F  M   GL PS +  N LI
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           N F    +   A   ++ M   G  PD+VTY +L+  L +  +  +  + +
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLF 650



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 159/350 (45%), Gaps = 43/350 (12%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P  ++YN +L   V       A  V  +M   GV P+++T+ L++ A       ++A +
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L++M      PNS IY  ++     R       ++L+EM   G  PD + +N +I  F 
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITW-------------------------------NT 480
           + N +       DRM+ +G  P+ +T+                               NT
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNT 351

Query: 481 LIDCHFKCGRYDRAEE-LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           L++   + GR + A   ++++M   GY P   T++ ++N L ++  +     L+ +M A+
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PN+ TYT L+D + + G+ ++A     GL        R M T G   + +  N+LI+
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEA-----GL------ILREMLTKGFSLNTVGYNALIS 460

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           A  +  +  EA  +   M   G KPD+ T+ +L+  L RVD+     + Y
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALY 510



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 7/231 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L R +++ +A  L +   L       +T+N LI A  R  ++++AL L++ M 
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I++L +T  ++  L   L++E+    +       N +I GF  AG 
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGL--GLFEEMIRKGLTPSIITCNILINGFCTAGK 607

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+ F+      G SP   TY ++I  L   GR  EA  +FE+L+  G++P +  YN 
Sbjct: 608 VHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNT 667

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           L+    + G   DA F++     +G +P++ T+++L+  +      E   I
Sbjct: 668 LICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTI 718


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 246/568 (43%), Gaps = 37/568 (6%)

Query: 115 FKLAESYRA----VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           F +AE  +A    V    ++SL+  LC +   +D A  +V  +++  +  +  + Y++ I
Sbjct: 194 FAVAERMKAQGVGVDVVGYNSLVAGLCRAGE-VDAARDMVDTMKRDGVEPNV-VTYTMFI 251

Query: 171 HALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYH 225
               R   + +AF L +   R+ + P  +T +AL+    ++    +A  L  +M + G  
Sbjct: 252 VEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAA 311

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            + + Y ++I +L +  + + SL   L  E+    + +D  +   ++    K G   +A 
Sbjct: 312 PNHVTYCMLIDTLAKAQRGNESL--SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAK 369

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                A     +P   TY  +I AL  +G    AE V  E++E  + P    +++++ G 
Sbjct: 370 DMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGL 429

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           VK G++  A   + EM+  G+ P+  TY  +ID        E+A  V  EM     + N 
Sbjct: 430 VKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNK 489

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
           FI   ++ G +  G+ ++   + +EM   GV  D   Y  +ID   K   L  A      
Sbjct: 490 FIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQE 549

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           +  + + PD + +N  I+C    G+   AE   EEMQ  G  P   TYN MI     + +
Sbjct: 550 LTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGK 609

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNAFR 580
                +LL  M+   + PN++TY+TL+    ++G  + A   L      G S  ++   R
Sbjct: 610 TAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRR 669

Query: 581 VM-------RTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           V+       R+D            GL       N+L+     +    +A  VL+ M   G
Sbjct: 670 VLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + PD +T+  L+    +       FS+Y
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTY 757



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 149/612 (24%), Positives = 256/612 (41%), Gaps = 93/612 (15%)

Query: 131 SLLKNLCSSNSSIDLAY--AVVSWLQK------------HNLCYSYE---LLYSILIHAL 173
           SLL  + S    +DL    A++ WL K            H L  ++    + Y++LI AL
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 174 ---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
              G  +   +     + + ++P  +T++++I+   +   + KA + M +M++ G   + 
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y  VI    +    +++L   +Y E+ C+ +E++  +++ ++ G  K G   KA    
Sbjct: 455 VTYGTVIDGSFKCLGQEAAL--DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 G+      Y  +I  L  +G    A  V +EL E  L P    YN  +     +
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+AE  + EM+ +G+ PD+ TY+ +I A +  G+   A  +L  M+ S  KPN   Y
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEP------------------------------ 438
           S ++ G  + G  ++   +L EM SSG  P                              
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 439 -----DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
                D   YN ++           AM   + M   GI PDTIT+N LI  HFK G  D 
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A   +++M   G  P   T+N ++  L    R  +   +L  M+ +G+ P+ +TY  LV 
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVT 812

Query: 554 IYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVMRTDGLKP 589
            YG+     +A+                            G+  QA   F  M+  G+ P
Sbjct: 813 GYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLP 872

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++   + L++ + + +   E    L+ MKE G  P   T +++ +A      F K   S+
Sbjct: 873 TSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRA------FSKPGMSW 926

Query: 650 ----LFFNIYKM 657
               L  N+YK+
Sbjct: 927 EARRLLKNLYKV 938



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 213/465 (45%), Gaps = 16/465 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           LL   + +  ++YN ++S  +    L     L+++M + G   D +  + V+  L R  +
Sbjct: 94  LLRSSESVDTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 244 ID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +D  ++L + + +      +++ G   N ++ G+ K GD   A       +  G+     
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGW--NSLVDGYCKVGDMETAFAVAERMKAQGVGVDVV 210

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y +++  L  +G    A  + + +K  G++P    Y   +  Y +   + DA  +  EM
Sbjct: 211 GYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEM 270

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            R GVLPD  T S L+      GR+  A  + +EME   A PN   Y  ++         
Sbjct: 271 VRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRG 330

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
             +  +L E+ S GV  D   Y  ++D   K   +  A   F   LS+   P+ +T+  L
Sbjct: 331 NESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVL 390

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K G  D AE++  EM+E+   P   T++ +IN L ++         +  M+ +G+
Sbjct: 391 IDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGI 450

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PNVVTY T++D     G F    +CL    + A++ +  M  +G++ +   ++SL+N  
Sbjct: 451 DPNVVTYGTVID-----GSF----KCLG--QEAALDVYHEMLCEGVEVNKFIVDSLVNGL 499

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            ++ +  +A A+ + M E G+  D V YTTL+  L +       F
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAF 544



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 212/478 (44%), Gaps = 26/478 (5%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  + +N+L+    +  D+E A  +  +M+  G   D + Y+ ++  L R  ++D++  +
Sbjct: 172 LDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAA--R 229

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            +   ++ D +E +       IV + +      A          G+ P   T +A++  L
Sbjct: 230 DMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGL 289

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR  EA A+F E+++ G  P    Y  L+    K     ++  ++ E+   GV+ D 
Sbjct: 290 CKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDL 349

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+ L+D     G+ + A+ + +     +  PN   Y+ ++      G      QVL E
Sbjct: 350 IMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSE 409

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+   + P+   ++ +I+   K   +  A      M   GI+P+ +T+ T+ID  FKC  
Sbjct: 410 MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLG 469

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + A +++ EM   G        + ++N L +  + E  + L   M  +G+L + V YTT
Sbjct: 470 QEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTT 529

Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
           L+D   ++G    A +                        C+ G S +A +    M++ G
Sbjct: 530 LIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTG 589

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           LKP  +  N++I A   + + A+A  +L  MK + +KP+++TY+TL+  L       K
Sbjct: 590 LKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEK 647



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 111/242 (45%), Gaps = 14/242 (5%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ +++G+ ++G       +L EM   GV  D    N ++    +   +  A A  + M+
Sbjct: 106 YNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMV 164

Query: 468 SEGI--EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
             G     D + WN+L+D + K G  + A  + E M+ +G       YN ++  L     
Sbjct: 165 RGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGE 224

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            +  + ++  M+  G+ PNVVTYT  +  Y           C     D A + +  M   
Sbjct: 225 VDAARDMVDTMKRDGVEPNVVTYTMFIVEY-----------CRRNAVDDAFSLYEEMVRK 273

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+ P  + L++L+    +D R +EA+A+ + M++ G  P+ VTY  L+  L +  + ++ 
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333

Query: 646 FS 647
            S
Sbjct: 334 LS 335



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           DT  YNV++  F +   L    A    M   G+  D +T NT++    + GR DRA  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 499 EEMQERGYFPC--TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           E M   G         +N +++   +    E    +   M+AQG+  +VV Y +LV    
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLV---- 216

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                  A  C  G  D A +    M+ DG++P+ +     I  +       +AF++ + 
Sbjct: 217 -------AGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEE 269

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           M   G+ PDVVT + L+  L +  +F + ++ +
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 237/542 (43%), Gaps = 35/542 (6%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKN 135
           S Q   + F  LL  L  ++  E A  L      +             VP    ++ L +
Sbjct: 5   SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMG-----------CVPDDAIYNALIS 53

Query: 136 LCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LT 192
             S       A+  ++ + K N C    + Y+ ++  L ++ +  +A  L    R    +
Sbjct: 54  GYSKAKDFGQAFKFLAEMVK-NHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCS 112

Query: 193 P--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           P   TYN ++        L++A  ++ +M   GY  D + Y+  I+ L + +++D +  +
Sbjct: 113 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA--R 170

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K    +    +  D      VI G  K+GD   A R L      G +P   TY+++I   
Sbjct: 171 KFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G    A  + + + + G +P   AYN+LL    ++G++  AE ++ EMER G  PD 
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 287

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            +Y+  ID    A R + A+ V   M      PN+  YS ++     + E      ++++
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPDTITWNTLIDCHFKCG 489
            +      D   Y V++D   K      A A F ++L E I EPD   +N ++D H K  
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + D+A ++ ++M ER       T+NI+++ L   +R  D + +L  M  +G +P+ VTY 
Sbjct: 408 QIDKALQIHKQMLERNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TLVD   + G+   A+E    L ++AV         G  P  +  ++LI     +    E
Sbjct: 467 TLVDAMCKCGKSAAALE----LFEEAVKG-------GCVPDVVTYSALITGLVHENMAEE 515

Query: 610 AF 611
           A+
Sbjct: 516 AY 517



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/476 (24%), Positives = 210/476 (44%), Gaps = 68/476 (14%)

Query: 227 DFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           D   ++++++ L R+N+++ +  LL ++ KE+ C     D  + N +I G++KA D  +A
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVP---DDAIYNALISGYSKAKDFGQA 64

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
            +FL         P   TY  ++  L  +GRT +A  + +E+++ G  P    YN +++G
Sbjct: 65  FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
             +   L +A+ ++ EM   G  PD  TY+  I       R + AR  L  M V+   P+
Sbjct: 125 LCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PD 181

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y+ ++ G    G+     ++L +M + G  PD   Y+ +ID F K   +  AM   D
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 465 RMLS-----------------------------------EGIEPDTITWNTLIDCHFKCG 489
            ML                                     G  PD +++N  ID   K  
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R  +A+ +F+ M ERG  P  ++Y++++  L +++  +D   L+   R +  + +++ YT
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYT 361

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNA-----FRVMRTDGLKPSNL------------ 592
            L+D   + GRFD+A      + D+ +       + VM     K   +            
Sbjct: 362 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421

Query: 593 -------ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                    N L++    D R ++A  +L  M + G  PD VTY TL+ A+ +  K
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGK 477



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 14/313 (4%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    +  LL+G  +   L+ A  ++  M+  G +PD+  Y+ LI  Y+ A  +  A  
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
            L EM  +H  P    Y+ I+ G    G  +   ++L EM+  G  P+ + YNV+++   
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +   L  A    + M   G  PD +T+N+ I    KC R D A +    M      P   
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVV 183

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           +Y  +IN L +    +   R+L  M  +G  P+VVTY++L+D + + G  + A+    GL
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM----GL 239

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            D        M   G +P+ +A NSL+ A        +A  +L  M+  G  PDVV+Y  
Sbjct: 240 LDS-------MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 632 LMKALIRVDKFHK 644
            +  L + ++  K
Sbjct: 293 CIDGLCKAERVKK 305



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 14/341 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   T+A ++  L  S +  +A  +   +KE G  P    YNAL+ GY K      A   
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++EM ++  LP   TY+ ++D    AGR + A  +L EM      PN + Y+ I+ G  +
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
             +     ++L+EM   G  PD   YN  I    K + +  A     RM    + PD ++
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + T+I+   K G  D A  + ++M  RG  P   TY+ +I+   +    E    LL +M 
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G  PN+V Y +L+    + G    A        D  V     M   G  P  ++ N+ 
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKA-------EDMLVE----MERRGFTPDVVSYNAC 293

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           I+   + +R  +A AV   M E G  P+  +Y+ L++ L +
Sbjct: 294 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCK 334



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/467 (21%), Positives = 183/467 (39%), Gaps = 72/467 (15%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           Y+  I  L + +++ EA     R  +TP  ++Y  +I+   ++ DL+ A  ++ +M   G
Sbjct: 153 YNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212

Query: 224 YHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
              D + YS +I    +  +++ +  LL  + K + C     +    N ++    + G  
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK-LGCRP---NMVAYNSLLGALHRLGHI 268

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            KA   L   +  G +P   +Y A I  L  + R  +A+AVF+ + E G  P   +Y+ L
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSH 400
           ++   K   L DA  +V +      + D   Y++L+D     GR+ E+  +  K ++   
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEM----------------------------- 431
            +P+ F Y+ +L  +  R +  +  Q+ K+M                             
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAET 448

Query: 432 -----KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT--------- 477
                   G  PD   Y  ++D   K      A+  F+  +  G  PD +T         
Sbjct: 449 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV 508

Query: 478 -------------------WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                              WN +I  + + G  D   +LF E+ E    P   T+   I+
Sbjct: 509 HENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEIS 568

Query: 519 -LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             L + E     + L       G  P++    TL+D++ + G  ++A
Sbjct: 569 GKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEA 615



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 146/346 (42%), Gaps = 19/346 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+  I  L ++E++ +A  +  R   +  TP   +Y+ L+    +  +L+ A+ L+ + R
Sbjct: 290 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAR 349

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +     D + Y++++  L +  + D   +L  K+  E  C   E D    N ++    K 
Sbjct: 350 EKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC---EPDVFFYNVMLDSHCKR 406

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               KA++               T+  ++  L    R  +AE +   + + G  P    Y
Sbjct: 407 RQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTY 465

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+    K G    A  +  E  + G +PD  TYS LI    +    E A ++  +++V
Sbjct: 466 GTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDV 525

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID-TFGKYNCLH 457
           +       +++ ++ GY + G      ++  E+  S VEP+   +   I     K   L 
Sbjct: 526 A-------LWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLG 578

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            A   FDR +  G  PD    NTLID   KCG  + A  +F  M++
Sbjct: 579 KARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M     +PD   + +++    + N L  A     RM   G  PD   +N LI  + K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           + +A +   EM +    P   TY  +++ L +  R +D  +LL  MR +G  PN+ TY  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           +V+   +  + D+A + LE            M   G  P  +  NS I    +  R  EA
Sbjct: 121 IVEGLCEERKLDEAKKMLEE-----------MAVRGYFPDVVTYNSFIKGLCKCDRVDEA 169

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
              L  M    + PDVV+YTT++  L +
Sbjct: 170 RKFLARMP---VTPDVVSYTTVINGLCK 194



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/464 (20%), Positives = 194/464 (41%), Gaps = 35/464 (7%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPL-WHSLLKNLCSSNSS 142
           +T ++N L ++ + +SAS +    +  NR            P  + + SL+   C     
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMT--NR---------GCTPDVVTYSSLIDGFCKG-GE 232

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILI---HALGRSEKLYEAFLLSQRQRLTP--LTYN 197
           ++ A  ++  + K   C    + Y+ L+   H LG   K  +  +  +R+  TP  ++YN
Sbjct: 233 VERAMGLLDSMLKLG-CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYN 291

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKE 255
           A I    + + ++KA  +  +M + G   +  +YS++++ L +  ++D   +L+++  ++
Sbjct: 292 ACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS-PKTATYAAVITALSNSG 314
            +   I L   LL+    G  K G   +A           +  P    Y  ++ +     
Sbjct: 352 YQIVDILLYTVLLD----GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  +A  + +++ E         +N L+ G      L DAE ++  M   G +PD  TY 
Sbjct: 408 QIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+DA    G+  +A  + +E       P+   YS ++ G       +  + +  ++   
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL--- 523

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF-KCGRYDR 493
               D   +N MI  + +       +  F  ++   +EP+  T+   I     K     +
Sbjct: 524 ----DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGK 579

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           A  LF+   + G+FP     N +I++  +    E+ +R+  +M+
Sbjct: 580 ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 222/514 (43%), Gaps = 64/514 (12%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
            +Y+ +I+ L   GR E++ +     +   + P   +YN LI    R   + KA  +   
Sbjct: 360 FVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRM 419

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY----------KEIECDKIELDGQLL 268
           M ++G     + Y+ +++     + ID +L  +L+           EI C  + LDG   
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDAL--RLWFLMLKRGVAPNEISCSTL-LDG--- 473

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
                   KAG   +A+         GL+    T+  VI  L   GR  EAE + + +KE
Sbjct: 474 ------LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
               P +  Y  L  GY K+G L  A  ++++ME  G  P    ++  I  +  A +W  
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +  EM      PN   Y  ++AG+   G       +  EM ++G+ P+    + ++ 
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEP----------------DTIT----------WNTLI 482
            F K   +  A     ++++  + P                DTI           WN +I
Sbjct: 648 CFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVII 707

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K GR   A+ LFE ++ + + P   TY+ +I+        ++   L   M + GL 
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN++TY +L  IYG          C  G   +AVN F  +++ G+ P+ +  N+LI+ + 
Sbjct: 768 PNIITYNSL--IYGL---------CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           ++ +  EAF + Q M E G++P V+TY+ L+  L
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGL 850



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 233/539 (43%), Gaps = 67/539 (12%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTPL----------------TYNALISACARND 207
           ++ L+H L R+ + ++A   L S      PL                +++ L+ A A   
Sbjct: 103 HAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAG 162

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            L  ALN+   M + G      + + ++  L ++   D  +   +Y ++    +  D   
Sbjct: 163 QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG--DPGMAAMVYGQMRIAGVLPDEFT 220

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           +  +   + + G  ++A+ F+   +G+GL      Y AV+      G T +A  + E L+
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-VLPDEHTYSLLIDAYANAGRW 386
             GL P    Y  L+KGY K G +++AE VV EM+ +G ++ DE  Y ++I+ Y   GR 
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V  EM  +    N F+Y+ ++ G    G  +   +VL+EM+  G+ PD + YN +
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 447 IDTFGK-------------------------YN------CLHHAMAAFDR----MLSEGI 471
           ID + +                         YN      C  HA+    R    ML  G+
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ I+ +TL+D  FK G+ ++A  L++E   RG      T+N +IN L +  R  + + 
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           LL  M+     P+ +TY TL D Y + G+   A   +             M   G  PS 
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK-----------MEHLGFAPSV 569

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
              NS I      ++  +   +   M   GL P++VTY  L+    +    H+  + Y 
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 203/456 (44%), Gaps = 20/456 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y+A++         E A  ++  +++ G   + + Y+L+++   +  +++ +  +++ 
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA--ERVV 311

Query: 254 KEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           KE+ E   I +D      +I G+ + G    A R     +  G+      Y  +I  L  
Sbjct: 312 KEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR  E + V +E+++ G++P   +YN L+ GY + G ++ A  +   M R+G+     T
Sbjct: 372 LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLT 431

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+  + +    + A  +   M      PN    S +L G    G+ ++   + KE  
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+  +   +N +I+   K   +  A    DRM      PD++T+ TL D + K G+  
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L  +M+  G+ P    +N  I      ++W  V  +   M A+GL PN+VTY  L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                      A  C EG   +A N +  M  +G+ P+    ++L++ F ++ +  EA  
Sbjct: 612 -----------AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           VLQ +    + P     T      I +DK   V  +
Sbjct: 661 VLQKLVNIDMIPGCSIST------IEIDKISHVVDT 690



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 208/516 (40%), Gaps = 55/516 (10%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQSLTRTNK 243
           QR+ L+P  +TY  L+    ++  +E+A  ++ +M++ G    D + Y ++I    +  +
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   ++  E+    I ++  + N +I G  K G   +  + L   + VG+ P   +Y
Sbjct: 340 MDDA--TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I      G   +A  +   +  +GL   T  YN LLKG+  +  + DA  +   M +
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P+E + S L+D    AG+ E A  + KE        N   ++ ++ G    G    
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  MK     PD+  Y  + D + K   L  A    ++M   G  P    +N+ I 
Sbjct: 518 AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            HF   ++ +  ++  EM  RG  P   TY  +I    ++    +   L   M   G+ P
Sbjct: 578 GHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNP 637

Query: 544 NVVTYTTLVDIYGQSGRFDDA--------------------IE----------------- 566
           NV   + L+  + + G+ D+A                    IE                 
Sbjct: 638 NVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPH 697

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C  G    A + F  +R     P N   +SLI+         EAF++
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              M   GL P+++TY +L+  L +  K  +  + +
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 211/484 (43%), Gaps = 77/484 (15%)

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           +HA+  + +L+  FL+ +R  + P  ++ + L+    +    E+ALNL  +    G   +
Sbjct: 442 LHAIDDALRLW--FLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 228 FINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS--- 282
            I ++ VI  L +  ++  +  LL ++ KE+ C    L  + L D      + G A+   
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 283 KAMRFLGMAQGV-----------------------------GLSPKTATYAAVITALSNS 313
             M  LG A  V                             GLSP   TY A+I      
Sbjct: 558 NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKE 617

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP----- 368
           G   EA  ++ E+  +G+ P     +AL+  + K G + +A  V+ ++    ++P     
Sbjct: 618 GNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIS 677

Query: 369 -----------------DEHT----YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
                            + H+    ++++I     +GR   A+ + + +      P++F 
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFT 737

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           YS ++ G    G     F +   M S+G+ P+   YN +I    K   L  A+  F+++ 
Sbjct: 738 YSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ 797

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           S+GI P+ IT+NTLID + K G+   A +L ++M E G  P   TY+I+I  L  Q   E
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYME 857

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +  +LL  M    + PN +TY TL+  Y +SG  ++    +  L D+       M   GL
Sbjct: 858 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE----ISKLYDE-------MHIRGL 906

Query: 588 KPSN 591
            P+N
Sbjct: 907 LPTN 910



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 55/298 (18%)

Query: 137 CS-SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLT 192
           CS S   ID    VV  +   N  +S  ++++++I  L +S ++ +A   F   + +R  
Sbjct: 674 CSISTIEIDKISHVVDTIADGNP-HSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732

Query: 193 P--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           P   TY++LI  CA +  +++A +L   M   G   + I Y                   
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY------------------- 773

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
                             N +I G  K+G  S+A+      Q  G+SP   TY  +I   
Sbjct: 774 ------------------NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G+T EA  + +++ E G++P    Y+ L+ G    GY+++A  ++ +M  + V P+ 
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNY 875

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
            TY  LI  Y  +G  E    +  EM +    P ++I           G W+R+  V+
Sbjct: 876 ITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI-----------GNWKRSDPVV 922



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 37/221 (16%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+   + R +P    +S L + C+++ SID A++                L  +++ A  
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS----------------LRDVMLSA-- 764

Query: 175 RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
                           LTP  +TYN+LI    ++  L +A+NL +K++  G   + I Y+
Sbjct: 765 ---------------GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I    +  K   +   KL +++  + I+      + +I G    G   +A++ L    
Sbjct: 810 TLIDEYCKEGKTTEAF--KLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMI 867

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
              + P   TY  +I     SG   E   +++E+   GL P
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 222/465 (47%), Gaps = 24/465 (5%)

Query: 181 EAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           E F L + +   P T   N ++S  +R + +E A    + M +     +   ++++I  L
Sbjct: 177 ECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVL 236

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  K+  +  +     +E   I+      N ++ G++  G    A   +   +  G  P
Sbjct: 237 CKEGKLKKA--KGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQP 294

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +++ + N GR   A  V  E+K  GL P + +YN L++G    G L+ A    
Sbjct: 295 DLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYR 351

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM + G++P  +TY+ LI       + E+A I+++E+       +S  Y+ ++ GY   
Sbjct: 352 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQH 411

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+ ++ F +  EM + G++P    Y  +I    + N    A   F++++ +G++PD +  
Sbjct: 412 GDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           NTL+D H   G  DRA  L +EM      P   TYN ++  L  + ++E+ + L+G M+ 
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 531

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDGLKPSNLALN 595
           +G+ P+ ++Y TL+  Y + G                 +AF V   M + G  P+ L  N
Sbjct: 532 RGIKPDHISYNTLISGYSKKG--------------DTKHAFIVRDEMLSLGFNPTLLTYN 577

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           +L+    ++Q    A  +L+ MK  G+ P+  ++ ++++A+ + D
Sbjct: 578 ALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSD 622



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 15/387 (3%)

Query: 259 DKIELDGQLLNDVIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
           D+++    +L D +V F  +     +A+    + +  G  PKT T   +++ LS   R  
Sbjct: 149 DRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIE 208

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A   + ++    +K     +N ++    K G LK A+  +  ME  G+ P   TY+ L+
Sbjct: 209 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLV 268

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             Y+  GR E AR+++ EM+    +P+   Y+ IL+   + G   R  +VL+EMK  G+ 
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLV 325

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD+  YN++I        L  A A  D M+ +G+ P   T+NTLI   F   + + AE L
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             E++E+G    + TYNI+IN   +    +    L   M   G+ P   TYT+L+ +  +
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             +  +A E  E +  +           G+KP  + +N+L++          AF++L+ M
Sbjct: 446 RNKTREADELFEKVVGK-----------GMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
               + PD VTY  LM+ L    KF +
Sbjct: 495 DRMNIDPDDVTYNCLMRGLCGEGKFEE 521



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 155/331 (46%), Gaps = 16/331 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA   F  +KE G  P+T+  N +L    ++  +++A    ++M R  +  + +T++++I
Sbjct: 174 EAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 233

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G+ + A+  L  ME    KP    Y+ ++ GY  RG  +    ++ EMKS G +
Sbjct: 234 NVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQ 293

Query: 438 PDTHFYNVMIDTFGKYNCLH-HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           PD   YN ++     + C    A      M   G+ PD++++N LI      G  + A  
Sbjct: 294 PDLQTYNPILS----WMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFA 349

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             +EM ++G  P   TYN +I+ L  + + E  + L+  +R +G++ + VTY  +++ Y 
Sbjct: 350 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYC 409

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           Q G    A      L D+       M TDG+KP+     SLI       +  EA  + + 
Sbjct: 410 QHGDAKKAF----ALHDE-------MMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +   G+KPD+V   TLM          + FS
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFS 489



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 8/286 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +++L   CS+N  ++ A+A    + K  +  ++   Y+ LIH L    K+  A 
Sbjct: 325 VPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTF-YTYNTLIHGLFMENKIEAAE 383

Query: 184 LLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           +L +  R     L  +TYN +I+   ++ D +KA  L  +M  DG       Y+ +I  L
Sbjct: 384 ILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVL 443

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            R NK   +   +L++++    ++ D  ++N ++ G    G+  +A   L     + + P
Sbjct: 444 CRRNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDP 501

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  ++  L   G+  EA  +  E+K  G+KP   +YN L+ GY K G  K A  V 
Sbjct: 502 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVR 561

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
            EM   G  P   TY+ L+   +     E A  +L+EM+     PN
Sbjct: 562 DEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607


>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
          Length = 714

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 239/494 (48%), Gaps = 40/494 (8%)

Query: 163 ELLYSILIHALGRS-EKLYEAFLL------SQRQR--LTPLTYNALISACARNDDLEKAL 213
           E L S LI  +GR  +K+  A +L      S+R++  L+ L +NA I A  R  D  +A+
Sbjct: 47  EKLVSRLIVEIGRKHKKMMVADVLRWMREESERRKIKLSSLPFNACIRALERMGDWREAV 106

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDV 271
            +++ M +DG   D ++Y+ V+ +L  +  I +   +L+++ +++  D +       N  
Sbjct: 107 AILNIMEKDGVEPDIVSYNTVLSALRHSPDIQNVFVMLKRMREKVSPDIVSF-----NTA 161

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           +    +  D    +  L M     +     T++ +I+     G+  EA A+ EE+    +
Sbjct: 162 LAACQRQCDWESGVAILEMMSEDQIERDVFTFSTLISLCDRCGKYDEAFALKEEMDAKNV 221

Query: 332 KPRTKAYNAL-----------LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            P    +NAL           L    +   L  A+ + +E + +G+ PD  TY+ L+  Y
Sbjct: 222 SPNIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVY 281

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
              G+W+ +  +L E+E  H   +   YS +++ +    ++    ++ ++M    V P+ 
Sbjct: 282 MEMGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNV 341

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI-DCHFKCGRYDRAEELFE 499
             YN +I    + N    A A FD M ++GI P+ +T++T+I  C  K   +  A +LF 
Sbjct: 342 ITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSK-DNWVTAFDLFL 400

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM  +   P   T++ ++++    ++WE    +L  M+  G+  N+  Y+ +V + GQ+G
Sbjct: 401 EMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAG 460

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           R DDA   L+             + DG+KP+ +   +LI+A    +    AF VL+ MKE
Sbjct: 461 RLDDAFRILDEC-----------KRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKE 509

Query: 620 NGLKPDVVTYTTLM 633
           + + P++VT+  L+
Sbjct: 510 DHVTPNLVTFNVLL 523



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 212/492 (43%), Gaps = 30/492 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +S LI    R  K  EAF L +    + ++P   T+NALI+ C  +     A +LMS+ R
Sbjct: 193 FSTLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNS----LATSLMSRKR 248

Query: 221 QD---------------GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
           Q+               G   D + Y+ ++       K   S    +  EIE   +  D 
Sbjct: 249 QNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESY--DILFEIEDQHVITDV 306

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              + +I  FAK    S A+          + P   TY ++I A   +    +A A F++
Sbjct: 307 ITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDD 366

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++  G+ P    Y+ ++           A  +  EM R  + PD  T+S L+    ++ +
Sbjct: 367 MQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQ 426

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           WE A  VL+ M+ +  + N  +YS ++      G     F++L E K  G++P+   +  
Sbjct: 427 WEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTA 486

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I        L  A    + M  + + P+ +T+N L+      G    A ++   +QE G
Sbjct: 487 LIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYG 546

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           +     T+N +I        W+    +   M+ Q + P++ T+  L     + G +  AI
Sbjct: 547 FRANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAI 606

Query: 566 ECLEGLSDQAVNAFRVM-RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +    + D  +   +++ R  G  PS  A NSLI+A  +     +AF V + MK +G++ 
Sbjct: 607 DV---MVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRA 663

Query: 625 DVVTYTTLMKAL 636
           ++VTY  ++  L
Sbjct: 664 NIVTYNLIISIL 675



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/534 (22%), Positives = 235/534 (44%), Gaps = 45/534 (8%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALG-------RSEKLY 180
           S L +LC      D A+A+   +   N+    Y++  L ++  ++L        R   L 
Sbjct: 194 STLISLCDRCGKYDEAFALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQNTLT 253

Query: 181 EAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
            A +L   ++   L P  +TYN+L+         +++ +++ ++       D I YS +I
Sbjct: 254 IAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLI 313

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
            +  +T K   SL  ++Y+++   ++  +    N +I    +A + S+A  F    Q  G
Sbjct: 314 STFAKTRKY--SLAIEMYEKMMERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQG 371

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           +SP   TY+ +I +  +    + A  +F E+    + P    ++ALL         + A 
Sbjct: 372 ISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAM 431

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            V+  M+ +G+  +   YS ++     AGR + A  +L E +    KPN  +++ ++   
Sbjct: 432 DVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHAC 491

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT---FGKYNCLHHAMAAFDRMLSE-GI 471
           +   +  R F+VL+ MK   V P+   +NV++ T    G   C    +     +L E G 
Sbjct: 492 KVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVG----LLQEYGF 547

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             +  T+NTLI    +   + +A E++ +MQ +   P  +T+N +     E   W     
Sbjct: 548 RANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAID 607

Query: 532 LLGNMRAQ---------GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           ++ +MR +         G  P+V  Y +L+    +S  +  A +  +G           M
Sbjct: 608 VMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKG-----------M 656

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +T G++ + +  N +I+     ++ +E   V+  MK+  + PD  T   ++ A+
Sbjct: 657 KTSGVRANIVTYNLIISILSGQRKLSEVLKVINEMKQEEVTPDSETIALMIDAV 710



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 164/341 (48%), Gaps = 29/341 (8%)

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           EE +   +K  +  +NA ++   +MG  ++A  +++ ME+ GV PD  +Y+ ++ A  ++
Sbjct: 75  EESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKDGVEPDIVSYNTVLSALRHS 134

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
              ++  ++LK M      P+   ++  LA  + + +W+    +L+ M    +E D   +
Sbjct: 135 PDIQNVFVMLKRMR-EKVSPDIVSFNTALAACQRQCDWESGVAILEMMSEDQIERDVFTF 193

Query: 444 NVMI---DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC-----------HFKCG 489
           + +I   D  GKY+    A A  + M ++ + P+  T+N LI               +  
Sbjct: 194 STLISLCDRCGKYD---EAFALKEEMDAKNVSPNIYTFNALIAVCKNSLATSLMSRKRQN 250

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A+ LF E +  G  P   TYN ++ +  E  +W++   +L  +  Q ++ +V+TY+
Sbjct: 251 TLTIAQILFAEAKAAGLRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYS 310

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+  + ++ ++  AIE  E + ++ V            P+ +  NSLI A       ++
Sbjct: 311 TLISTFAKTRKYSLAIEMYEKMMERQV-----------MPNVITYNSLIFACLRANNFSQ 359

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           AFA    M+  G+ P+VVTY+T++ +    D +   F  +L
Sbjct: 360 AFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFL 400



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/449 (20%), Positives = 181/449 (40%), Gaps = 59/449 (13%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE--------LLYSILIHALGRSEK----- 178
           L  ++ + NS + +   +  W + +++ +  E        + YS LI    ++ K     
Sbjct: 267 LRPDIVTYNSLLGVYMEMGKWKESYDILFEIEDQHVITDVITYSTLISTFAKTRKYSLAI 326

Query: 179 -LYEAFLLSQRQRL-TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
            +YE  +  +RQ +   +TYN+LI AC R ++  +A      M+  G   + + YS +I 
Sbjct: 327 EMYEKMM--ERQVMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIA 384

Query: 237 SLTRTNKIDSSL---LQKLYKEIECDK------------------------------IEL 263
           S    +   ++    L+ + KEI  D                               I+L
Sbjct: 385 SCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQL 444

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           + ++ + V+    +AG    A R L   +  G+ P    + A+I A   +     A  V 
Sbjct: 445 NIRMYSAVVHVCGQAGRLDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVL 504

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E +KE  + P    +N LL     +G    A  VV  ++  G   +  T++ LI     +
Sbjct: 505 ELMKEDHVTPNLVTFNVLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRS 564

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK---------SS 434
             W+ A  V  +M++   +P+   ++ +     + G+W+R   V+ +M+          +
Sbjct: 565 HEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIKTEKILIRMA 624

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P    YN +I    K +    A   +  M + G+  + +T+N +I       +    
Sbjct: 625 GHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNLIISILSGQRKLSEV 684

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQ 523
            ++  EM++    P + T  +MI+ +  Q
Sbjct: 685 LKVINEMKQEEVTPDSETIALMIDAVQAQ 713



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 144/338 (42%), Gaps = 52/338 (15%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P P+  S L ++C  +   + A  V+ W+Q   +  +   +YS ++H  G++ +L +AF 
Sbjct: 409 PDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIR-MYSAVVHVCGQAGRLDDAFR 467

Query: 185 L---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           +    +R  + P  + + ALI AC    DL++A  ++  M++D    + + +++++ +  
Sbjct: 468 ILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELMKEDHVTPNLVTFNVLLGT-- 525

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
                             C+ +                 G+++ A + +G+ Q  G    
Sbjct: 526 ------------------CEVV-----------------GNSTCAFQVVGLLQEYGFRAN 550

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  +I     S    +A  V+ +++   ++P    +NAL     + G  + A  V+ 
Sbjct: 551 LQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMV 610

Query: 360 EM---------ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +M           +G  P    Y+ LI A   +  ++ A  V K M+ S  + N   Y+ 
Sbjct: 611 DMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYNL 670

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           I++    + +     +V+ EMK   V PD+    +MID
Sbjct: 671 IISILSGQRKLSEVLKVINEMKQEEVTPDSETIALMID 708


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TY  VI+     GR  EA  VF+E+ 
Sbjct: 189 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 248

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G +KP    YNAL+ GY   G L  A      M   GV     TY+LL+ A    GR 
Sbjct: 249 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 308

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM       + F Y+ ++ G+   G  ++  ++ + M   GV      Y  +
Sbjct: 309 TEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 368

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    K   +      FD  +  GI PD + +N LI+ H   G  DRA E+  EM+++  
Sbjct: 369 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 428

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ ++L+  M  +G+ P++VTY TL+  Y   G   DA+ 
Sbjct: 429 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 488

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + ++ +N        G  P+ L  N+LI    ++ +  +A  +++ M ENG+ PD 
Sbjct: 489 ----IRNEMMN-------KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 537

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 538 STYISLIEGLTTEDE 552



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 184/391 (47%), Gaps = 5/391 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ-DG 223
           ++I++  L  + K   A  LL Q  R   +TYN +I+       ++ AL++M +MR+  G
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG 216

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDAS 282
              +   Y  VI    +  ++D ++  K++ E +   +++ +  + N +I G+   G   
Sbjct: 217 IAPNQYTYGTVISGWCKVGRVDEAV--KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLD 274

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ +       G++   ATY  ++ AL   GR  EA  + EE+   GL      YN L+
Sbjct: 275 TALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILI 334

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+ K G +K A  +   M R GV     TY+ LI A +  G+ +    +  E      +
Sbjct: 335 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 394

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +Y+ ++  +   G   R F+++ EM+   + PD   YN ++        +  A   
Sbjct: 395 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 454

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M   GI+PD +T+NTLI  +   G    A  +  EM  +G+ P   TYN +I  L +
Sbjct: 455 IDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             + +D + ++  M   G+ P+  TY +L++
Sbjct: 515 NGQGDDAENMVKEMVENGITPDDSTYISLIE 545



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL   GR  + YE    +  +   L   TYN LI+   +  +++KAL +   M 
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y+ +I +L++  ++  +   KL+ E     I  D  L N +I   + +G+
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQET--DKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + +E+ + G++P    YN 
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  + +EM   G  P   TY+ LI      G+ + A  ++KEM  + 
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 533 ITPDDSTYISLIEG 546



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 30/166 (18%)

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M       CTTT+NIM+  L    +      LL  M      PN VTY T++  + 
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFC 196

Query: 557 QSGRFDDAIE-------------------------CLEGLSDQAVNAFRVMRTDG-LKPS 590
             GR   A++                         C  G  D+AV  F  M T G +KP 
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N+LI  + +  +   A      M E G+   V TY  L+ AL
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 224/478 (46%), Gaps = 19/478 (3%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ + G+   +     L    + + + P   +Y   I    +    ++A  ++ KM 
Sbjct: 216 YSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKME 275

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D + +++VIQ L    ++  +  + ++ +++    + D      ++     +GD
Sbjct: 276 DSGCKPDVVTHTVVIQVLCDAGRLSDA--KDVFWKMKASDQKPDRVTYITLLDKCGDSGD 333

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +   M         G +    +Y AV+ AL   GR  EA AVF+E+KE G+ P   +YN+
Sbjct: 334 SQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNS 393

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K      A  + + M   G  P+ +T+ L I+ Y  +G+   A    + M+   
Sbjct: 394 LISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 453

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+    + +L+     G      +V  E+K  GV PDT  Y +MI    K +    AM
Sbjct: 454 IVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAM 513

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M+  G  PD +  N+LID  +K G+ + A +LF +++E    P   TYN +++ L
Sbjct: 514 NFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGL 573

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G + + ++V  LL  M      PN++TY T++D   ++G  + AI  L  ++++      
Sbjct: 574 GREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEK------ 627

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                G  P   + N+++    +++R  EAF +   MK+  L PD  T  T++ + ++
Sbjct: 628 -----GCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVK 679



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 213/480 (44%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+ A GR   + + F L Q+Q  +    T+  + S       L  A   +  MR+ G   
Sbjct: 117 LMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSL 176

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ +I  L ++   D+  ++ +YK +  D I    +  + ++V F K  D    + 
Sbjct: 177 NGYTYNGLIYFLVKSG-FDAEAME-VYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLW 234

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L   +  G+ P   +Y   I  L  + R  EA  +  ++++SG KP    +  +++   
Sbjct: 235 LLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLC 294

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L DA+ V  +M+ S   PD  TY  L+D   ++G  +S   +   M       N  
Sbjct: 295 DAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIV 354

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++      G       V  EMK  G+ P+ + YN +I  F K +    A+  F+ M
Sbjct: 355 SYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            + G  P+  T    I+ + K G+  +A + +E M+ +G  P     N +++ L    R 
Sbjct: 415 NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRL 474

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++  G+ P+ +TYT ++    ++ +           +D+A+N F  M   G
Sbjct: 475 GMAKRVFYELKDMGVSPDTITYTMMIKCCSKASK-----------ADEAMNFFSDMVETG 523

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LALNSLI+   +  +  EA+ +   +KE  ++P   TY TL+  L R  K  +V 
Sbjct: 524 CVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 583



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 225/525 (42%), Gaps = 90/525 (17%)

Query: 166  YSILIHALGRSEKLYEAFLLSQR--QRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LGR  K+ E   L +     + P   +TYN ++   ++N ++  A+ ++  M 
Sbjct: 566  YNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMT 625

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            + G   D  +Y+ V+  L +  + + +   +++ +++   +  D   L  ++  F K G 
Sbjct: 626  EKGCTPDLSSYNTVMYGLIKEERFEEAF--RMFCQMK-KILAPDYATLCTILPSFVKNGL 682

Query: 281  ASKAMR-----------------FLGMAQGV-------------------GLSPKTATYA 304
              +A+                  F  + +G+                   G+        
Sbjct: 683  MKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLC 742

Query: 305  AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
             +I  L    + +EA  +F + K  G+  +T +YN+L++G V    +  AE + +EM+R 
Sbjct: 743  PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 365  GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            G  PDE TY+L++DA   + R E       EM                            
Sbjct: 803  GCGPDEFTYNLILDAMGKSMRIE-------EM---------------------------- 827

Query: 425  FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +V  EM   G E     YN +I    K   L  A+  +  ++SEG  P   T+  L+D 
Sbjct: 828  LRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 887

Query: 485  HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
              K G+   AE LF EM E G  P  T YNI++N        E+V ++   M  QG+ P+
Sbjct: 888  LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947

Query: 545  VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            + +YT L+D    +GR +D      GLS      FR +   GL+P  +  N LI+  G+ 
Sbjct: 948  IKSYTVLIDTLCTAGRLND------GLS-----YFRQLLELGLEPDLIIYNLLIDGLGKS 996

Query: 605  QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +R  EA  +   MK+ G+ P++ TY +L+  L +  K  +    Y
Sbjct: 997  ERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMY 1041



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 228/515 (44%), Gaps = 63/515 (12%)

Query: 166  YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNAL---ISACARNDDLEKALNLMSK--M 219
            Y+ +++ L + E+  EAF +  Q +++    Y  L   + +  +N  +++AL+ + +  +
Sbjct: 636  YNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYIL 695

Query: 220  RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + D  + D  ++  +++ +     ++ S+  +  + I    I L+   L  +I    K  
Sbjct: 696  KAD-CNTDKSSFHSLMEGILNKAGVEKSI--EFAENIASRGILLNDFFLCPLIRHLCKHK 752

Query: 280  DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP------ 333
             A +A +     +G+G+S KT +Y ++I  L +      AE +F E+K  G  P      
Sbjct: 753  KALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYN 812

Query: 334  ----------------RTKA-------------YNALLKGYVKMGYLKDAEFVVSEMERS 364
                            R +A             YN ++ G VK   L+ A  +   +   
Sbjct: 813  LILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSE 872

Query: 365  GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            G  P   TY  L+D    AG+   A  +  EM     KPN  IY+ +L G+R  G  +  
Sbjct: 873  GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENV 932

Query: 425  FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             Q+ ++M   G+ PD   Y V+IDT      L+  ++ F ++L  G+EPD I +N LID 
Sbjct: 933  CQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDG 992

Query: 485  HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
              K  R + A  LF EM+++G  P   TYN +I  LG+  +  +  ++   +  +G  PN
Sbjct: 993  LGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPN 1052

Query: 545  VVTYTTLVDIYGQSGRFDD---AIEC-----------LEGLSDQ-----AVNAFRVMRTD 585
            V TY  L+  Y  SG  D+   A +C           + GL D+     A   F  M+  
Sbjct: 1053 VFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRR 1112

Query: 586  GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            G  P     N +++A G+  R  E   V + + E+
Sbjct: 1113 GCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 11/319 (3%)

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
           T++ N +L+     G + D   V   M++  V  +  T++ +       G   SA + L 
Sbjct: 108 TESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALP 167

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M  +    N + Y+ ++      G      +V K M   G+ P    Y+V++ +FGK  
Sbjct: 168 VMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKR 227

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +   +   + M + G++P+  ++   I    +  R+D A ++  +M++ G  P   T+ 
Sbjct: 228 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHT 287

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           ++I +L +  R  D K +   M+A    P+ VTY TL+D  G SG            S  
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD-----------SQS 336

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            +  +  M  DG   + ++  ++++A  +  R  EA AV   MKE G+ P+  +Y +L+ 
Sbjct: 337 VMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLIS 396

Query: 635 ALIRVDKFHKVFSSYLFFN 653
             ++ D F +    +   N
Sbjct: 397 GFLKADMFDRALELFNHMN 415



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 12/170 (7%)

Query: 164  LLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
            ++Y++LI  LG+SE++ EA  L    +++ + P   TYN+LI    +     +A  +  +
Sbjct: 984  IIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEE 1043

Query: 219  MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +   G+  +   Y+ +I+  + +   D++     Y   +C  + +   L   +I G    
Sbjct: 1044 LLIKGWKPNVFTYNALIRGYSVSGSTDNA-----YAAYDC--VAVGVSLKTALISGLVDE 1096

Query: 279  GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
               + A       +  G  P   TY  ++ A+  S R  E   V EE+ E
Sbjct: 1097 NLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 199/439 (45%), Gaps = 13/439 (2%)

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
             + A  +   ++  L    +M   G      + ++V++ L R  +++ S  +KL KE  
Sbjct: 175 VFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS--KKLIKEFS 232

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I+ +    N +I  + K  D S   + L + +  G+     TY  +I     +G+  
Sbjct: 233 GKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMN 292

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           + E +F+E++E G++     Y +L+    + G +K A  +  E+   G+LP  HTY  LI
Sbjct: 293 DVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALI 352

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D     G   +A I++ EM+         +++ ++ GY  +G       +   M+  G +
Sbjct: 353 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQ 412

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D    N +   F +      A     RM+  G+   T+++  LID + K G  + A+ L
Sbjct: 413 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRL 472

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F EM  +   P   TYN+MI    +Q + ++ ++L  NM+A G+ P+  TYT+L  I+G 
Sbjct: 473 FVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSL--IHG- 529

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                   EC+    D+A+  F  M   GL  +++    +I+   +  +  EAF +   +
Sbjct: 530 --------ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEI 581

Query: 618 KENGLKPDVVTYTTLMKAL 636
           K  G   D   YT L+ ++
Sbjct: 582 KRKGYTIDNKVYTALIGSM 600



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 166/358 (46%), Gaps = 2/358 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN +I+A  ++ D      ++  M++DG   + + Y+L+I+   +  K++   ++KL+ 
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMND--VEKLFD 299

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    IE D  +   +I    + G+  +A          GL P + TY A+I  +   G
Sbjct: 300 EMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVG 359

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               AE +  E++  G+      +N L+ GY + G + +A  +   ME+ G   D  T +
Sbjct: 360 EMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCN 419

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +   +    R++ A+  L  M     + ++  Y+ ++  Y   G  +   ++  EM S 
Sbjct: 420 TIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 479

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            V+P+   YNVMI  + K   +  A   +  M + G++PD+ T+ +LI         D A
Sbjct: 480 EVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEA 539

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             LF EM  +G    + TY +MI+ L +  + ++   L   ++ +G   +   YT L+
Sbjct: 540 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 176/423 (41%), Gaps = 31/423 (7%)

Query: 256 IECD----KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           ++CD    K E   +  + V   +   G   + +R        GLS    +    + A  
Sbjct: 122 VDCDISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAK 181

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              R       F  + +SG+K    +   +++G  + G ++ ++ ++ E    G+ P+ +
Sbjct: 182 KRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAY 241

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ +I+AY     +     +LK M+      N   Y+ ++      G+     ++  EM
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G+E D H Y  +I    +   +  A   FD +  +G+ P + T+  LID   K G  
Sbjct: 302 RERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEM 361

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             AE L  EMQ +G       +N +IN    +   ++   +   M  +G   +V T  T+
Sbjct: 362 GAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTI 421

Query: 552 VDIYGQSGRFDDA------------------------IECLEGLSDQAVNAFRVMRTDGL 587
              + +  R+D+A                        + C EG  ++A   F  M +  +
Sbjct: 422 ASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEV 481

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
           +P+ +  N +I A+ +  +  EA  +   MK NG+ PD  TYT+L+        VD+  +
Sbjct: 482 QPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMR 541

Query: 645 VFS 647
           +FS
Sbjct: 542 LFS 544


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 249/548 (45%), Gaps = 44/548 (8%)

Query: 128 LWHSLLKNLCSSNSSI-DLAYAV---VSWLQKHNLCYS----YELL-----YSILIHALG 174
           LW +  +N+C S S + D+ ++V   +  L++ N C+S    +  L      + L+H L 
Sbjct: 208 LWST--RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLS 265

Query: 175 RSE--KLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +S   +L   F   ++      +  TYN +I    +  DLE +  L  +MR+ G   D +
Sbjct: 266 KSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 325

Query: 230 NYSLVIQSLTRTNKID--SSLLQKLYKEIEC--DKIELDGQLLNDVIVGFAKAGDASKAM 285
            Y+ +I    +   ++  +SL  ++ K++ C  D I  +G     +I  + K     +A 
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNG-----LINCYCKFEKMPRAF 379

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
            +    +  GL P   TY+ +I A    G    A  +F +++ +GL P    Y +L+   
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K G L +A  ++++M ++GV  +  TY+ L+D    AGR   A  V + M      PN 
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 499

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y+ ++ GY      +   ++LK+M    ++PD   Y  +I        L       + 
Sbjct: 500 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 559

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M S GI  + +   T+ID +FK G+   A   F+EMQ+ G      TY ++I+ L +   
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            E        M + GL PNV  YT+L+D   +    ++ IE  + L D+       M+  
Sbjct: 620 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCK----NNCIESAKKLFDE-------MQCR 668

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+ P   A  +LI+   +     EA  ++  M E  ++ D+  YT+L+    +  + H+ 
Sbjct: 669 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ- 727

Query: 646 FSSYLFFN 653
             +  FFN
Sbjct: 728 --ARKFFN 733



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 220/474 (46%), Gaps = 18/474 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  L   G  E     F+  +   L+P  +TYN+LI    +   LE+  +L ++M+
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I    +  K+  +   + + E++ + ++ +    + +I  F K G 
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAF--EYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++     +  GL P   TY ++I A   +G   EA  +  ++ ++G+K     Y A
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  K G + +AE V   M + G+ P++  Y+ L+  Y  A R E A  +LK+M   +
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  +Y  I+ G+  + + + T  +L+EMKS G+  +      +ID + K      A+
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 589

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M   G+E   +T+  LID   K G  + A + F  M   G  P    Y  +I+ L
Sbjct: 590 NFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 649

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +    E  K+L   M+ +G+ P++  +T L+D   + G   +A+  +  +++ A+    
Sbjct: 650 CKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDL 709

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            + T           SL++ F +     +A      M E G+ P+ V    L++
Sbjct: 710 HVYT-----------SLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 195/441 (44%), Gaps = 42/441 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI   G+   L E   L    +     P  +TYN LI+   + + + +A    S+M+
Sbjct: 327 YNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK 386

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + + YS +I +  +   +  ++  KL+ ++    +  +      +I    KAG+
Sbjct: 387 NNGLKPNVVTYSTLIDAFCKEGMMQGAI--KLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A + L      G+     TY A++  L  +GR IEAE VF  + + G+ P  + Y A
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY+K   ++DA  ++ +M    + PD   Y  +I  + +  + E  +++L+EM+   
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N  I + I+  Y   G+        +EM+  GVE     Y V+ID   K   +  A+
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
             F RMLS G++P+   + +LID   K    + A++LF+EMQ RG  P  T +  +I   
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 684

Query: 518 ----NL----------------------------LGEQERWEDVKRLLGNMRAQGLLPNV 545
               NL                              +       ++    M  +G+LP  
Sbjct: 685 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744

Query: 546 VTYTTLVDIYGQSGRFDDAIE 566
           V    L+  Y + G+ D+AIE
Sbjct: 745 VLCICLLREYYKRGQLDEAIE 765



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 157/380 (41%), Gaps = 42/380 (11%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI A    G  +   + F+  +R  L P   TY +LI A  +  +L +A  L++ M 
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y+ ++  L +  ++  +  +++++ +  D I  + Q+   ++ G+ KA  
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEA--EEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AM+ L       + P    Y ++I    +  +  E + + EE+K  G+         
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR--------------- 385
           ++  Y K G   DA     EM+  GV     TY +LID    AG                
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 386 --------------------WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
                                ESA+ +  EM+     P+   ++ ++ G    G  Q   
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            ++  M    +E D H Y  ++  F +   LH A   F+ M+ +GI P+ +    L+  +
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754

Query: 486 FKCGRYDRAEELFEEMQERG 505
           +K G+ D A EL  EM+  G
Sbjct: 755 YKRGQLDEAIELKNEMERMG 774



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 142/317 (44%), Gaps = 7/317 (2%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+  L ++ ++ EA   F    +  ++P    Y AL+    + + +E A+ ++ +M 
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D I Y  +I       K++ + L  + +E++   I  +  +   +I  + KAG 
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKL--ILEEMKSRGISANPVISTTIIDAYFKAGK 584

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +S A+ F    Q VG+     TY  +I  L  +G    A   F  +   GL+P    Y +
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K   ++ A+ +  EM+  G+ PD   ++ LID     G  + A +++  M    
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + +  +Y+ +++G+   GE  +  +   EM   G+ P+      ++  + K   L  A+
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764

Query: 461 AAFDRMLSEGIEPDTIT 477
              + M   G+  ++ T
Sbjct: 765 ELKNEMERMGLITESAT 781


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 181/356 (50%), Gaps = 12/356 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P + T+ A++   S  GR  + E + E +    ++P   +YN LL+G  K+    +A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 355 EFVVSEM-ERSG-VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           E +V +M  R G   PD  TYS L+  Y  AG+ E +R +LKE+     +P++ +Y++++
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
           A            ++L+EM  +G  P    +N +I    +   L  A +   +M + G++
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            D +T+NTL+D   K GR   AE+L E M+  G  P    Y+  +  L +  +  D  ++
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  MR     PNVVTY T++D   +SG+ D A+E +E ++           +DG   + +
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS----------SDGCGLNVV 294

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
             +++++   +  R  EA +V++ M   G +PDVVTY++L+  L +  K  +   +
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 205/452 (45%), Gaps = 19/452 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+NAL++  ++         L+  M       + ++Y+ +++ L +  +   +      
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA------ 64

Query: 254 KEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +E+  D I   G+   D++       G+ KAG   ++   L      GL P    Y  V+
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            +L  S R  EA  + EE+  +G  P    +N L+ G  +   L+ A+ ++ +M  SGV 
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            D  TY+ L+D    AGR + A  +L+ M+ S   P+   YS  + G    G+     QV
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHF 486
           L++M+ S  +P+   YN ++D   K   +  A+   ++M  S+G   + + ++T++D   
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K GR   A  + E M   G  P   TY+ ++N L +  + E+    +  M  +G  PN V
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY +LV      GR  +A   +E +S                PS    N+LI    +  R
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHC------PPSVSTYNALIGGLCKAGR 418

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +A    Q M+  G  PD V+Y+T+++ L R
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 197/410 (48%), Gaps = 19/410 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           Y+ L+  L + E+ +EA      ++S+  R TP  +TY+ L+S   +   +E++  L+ +
Sbjct: 48  YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKE 107

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--LYKEIECDKIELDGQLLNDVIVGFA 276
           +   G   D + Y+ V+ SL ++ ++  +L     + +   C  +       N +I G  
Sbjct: 108 VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTL----ITFNTLISGCC 163

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           +  +   A   L      G+     TY  ++  L  +GR  EAE + E +K SG  P   
Sbjct: 164 REKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           AY++ + G  K G + DA  V+ +M  S   P+  TY+ ++D    +G+ ++A  ++++M
Sbjct: 224 AYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283

Query: 397 EVSHAKP-NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
             S     N   YS ++ G    G  Q    V++ M  +G  PD   Y+ +++   K   
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF-----PCT 510
           +  A+ A   M  EG +P+ +T+ +L+     CGR   AE + EEM   G       P  
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSV 403

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           +TYN +I  L +  R +D  +    MR+QG  P+ V+Y+T+V+   +SGR
Sbjct: 404 STYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 8/317 (2%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +T+N LIS C R  +LE A +L+ KM   G   D + Y+ ++  L +  ++  +  ++
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEA--EQ 208

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L + ++      D    +  + G  K+G    A + L   +     P   TY  ++  L 
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLC 268

Query: 312 NSGRTIEAEAVFEELKES-GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            SG+   A  + E++  S G       Y+ ++ G  K+G  ++A  V+  M R+G  PD 
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TYS L++    AG+ E A   ++EM +   KPN+  Y  ++ G    G      ++++E
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 431 M-----KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           M           P    YN +I    K   +  A+  F RM S+G +PD ++++T+++  
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448

Query: 486 FKCGRYDRAEELFEEMQ 502
            + GR  +AE +  E++
Sbjct: 449 ARSGRALQAEMILSEVR 465



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 35/329 (10%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           F  L++      N E A +L            K+A S        +++L+  LC +   +
Sbjct: 155 FNTLISGCCREKNLEMADSLLQ----------KMAASGVKADVVTYNTLMDGLCKAGR-L 203

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNA 198
             A  ++  + K + C    + YS  ++ L +S K+ +A  + ++ R +      +TYN 
Sbjct: 204 QEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNT 262

Query: 199 LISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKE 255
           ++    ++  ++ AL +M +M   DG   + + YS V+  L +  +     S+++ + + 
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322

Query: 256 IECDKIELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
                   D    + ++ G  KAG   +A +A+R + M    G  P   TY +++  L +
Sbjct: 323 ----GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME---GCKPNAVTYCSLVHGLCS 375

Query: 313 SGRTIEAEAVFEELKESG-----LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            GR  EAE + EE+   G       P    YNAL+ G  K G + DA      M   G  
Sbjct: 376 CGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCD 435

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEM 396
           PD  +YS +++  A +GR   A ++L E+
Sbjct: 436 PDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 61/205 (29%)

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY------------ 548
           M   G  P + T+N ++N   +Q R  D +RLL  M A+ + PNVV+Y            
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 549 -------------------------TTLVDIYGQSGRFDDAIECLE-----GLSDQAVNA 578
                                    +TL+  Y ++G+ +++ E L+     GL   A+  
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 579 FRV-------------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            +V                   M   G  P+ +  N+LI+    ++    A ++LQ M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHK 644
           +G+K DVVTY TLM  L +  +  +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQE 205


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 228/496 (45%), Gaps = 22/496 (4%)

Query: 164 LLYSILIHALGRS---EKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSK 218
           +++ +LI     +   E   + FL +++    L+  + N L+   A  +  E   +L  +
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239

Query: 219 MRQDGYHCDFINYSLVIQSLTRTN----KIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           M+  G   +   Y++++    + N     ID+    ++ +E+E +         +  I G
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299

Query: 275 FAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
             + G    A+ F+  +    GL      Y A+I  L   G   EA  V EE+K  G+ P
Sbjct: 300 LCRVGYVESALDFVRSLISANGLV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y+ L+ G+ K G ++   +++ EM+ S + P   +YS L          + +  + 
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +++  +  K +   YS ++ G+  +G+     ++++EM  + + PD   +  ++  F K 
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
               +A+  F+ ML  GI P   T N +ID H + GR + A  L  EMQ +G FP   TY
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +IN L ++ + E    L   M  + +LP+VV Y+TL+D + +              S 
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSN-----------SQ 587

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A+  +  M   G+ P  +A   LIN      R  EA+ + + M ENG+ PD ++YT+++
Sbjct: 588 KALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647

Query: 634 KALIRVDKFHKVFSSY 649
               R+    K ++ +
Sbjct: 648 AGFCRIGDMRKAWALF 663



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 206/474 (43%), Gaps = 22/474 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS  I+ L R   +  A      L+S    +    YNA+I    +  +L++AL ++ +M+
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   YS++I    +   ++  L   L +E++   +E      + +  G  K   
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLY--LIEEMKYSNMEPSLVSYSSLFHGLCKKRL 410

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +  ++         G       Y+ +I      G    A  + EE+  + L P    + +
Sbjct: 411 SDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFES 470

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+ KMG   +A    + M   G+LP   T +++IDA+   GR E A  ++ EM+   
Sbjct: 471 LVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQG 530

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN F Y+ ++       + +R  ++   M    V P    Y+ +ID F K +    A+
Sbjct: 531 IFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKAL 590

Query: 461 AAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             + RML  G+ PD + +  LI+  CH    R   A  LF++M E G  P   +Y  +I 
Sbjct: 591 MLYARMLKIGVTPDMVAYTILINILCHR--SRMCEAYNLFKKMTENGMTPDKISYTSVIA 648

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                        L   M  +G LP VVTYT+LVD Y +  R D A    + L D+    
Sbjct: 649 GFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIA----DMLIDE---- 700

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
              M+  G+ P  +  N LI A        +A  +L  MKENG+ PD +TY  L
Sbjct: 701 ---MKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 200/435 (45%), Gaps = 13/435 (2%)

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           D  +A  ++ +M ++G     + YS  I  L R   ++S+L     + +      ++   
Sbjct: 270 DTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESAL--DFVRSLISANGLVNVYC 327

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G  K G+  +A++ L   +  G+SP   TY+ +I      G   +   + EE+K
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
            S ++P   +Y++L  G  K      +  +  ++  +G   D+  YS+LI  +   G  +
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           SA  +++EM  ++  P+   +  ++ G+   G W    +    M   G+ P     NV+I
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   +   +  A+   + M ++GI P+  T+N +I+   K  + +RA ELF  M +R   
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVL 567

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P    Y+ +I+   +Q   +    L   M   G+ P++V YT L++I     R      C
Sbjct: 568 PSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRM-----C 622

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +A N F+ M  +G+ P  ++  S+I  F       +A+A+   M + G  P VV
Sbjct: 623 ------EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVV 676

Query: 628 TYTTLMKALIRVDKF 642
           TYT+L+    ++++ 
Sbjct: 677 TYTSLVDGYCKMNRI 691



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 196/444 (44%), Gaps = 13/444 (2%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TY+  I    R   +E AL+ +  +       +   Y+ +I  L +  ++D +L  K
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEAL--K 346

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + +E++   I  D    + +I GF K GD  K +  +   +   + P   +Y+++   L 
Sbjct: 347 VLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLC 406

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
               +  +  +F +L  +G K    AY+ L+KG+   G L  A  ++ EM R+ + PD  
Sbjct: 407 KKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPS 466

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            +  L+  +   G W +A      M      P+    + I+  +   G  +    ++ EM
Sbjct: 467 NFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEM 526

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           ++ G+ P+   YN +I+   K      A+  F  ML   + P  + ++TLID   K    
Sbjct: 527 QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNS 586

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
            +A  L+  M + G  P    Y I+IN+L  + R  +   L   M   G+ P+ ++YT++
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSV 646

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  +           C  G   +A   F  M   G  P+ +   SL++ + +  R   A 
Sbjct: 647 IAGF-----------CRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIAD 695

Query: 612 AVLQYMKENGLKPDVVTYTTLMKA 635
            ++  MK  G+ PDVVTY  L+ A
Sbjct: 696 MLIDEMKRKGITPDVVTYNVLIAA 719


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 177/401 (44%), Gaps = 40/401 (9%)

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S+A   +    G    P   +Y  VI  L   G   +A  +F E+   G  P    YN+
Sbjct: 120 GSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNS 179

Query: 341 LLKGYVKM----------------GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++ G  K                 G L++A  ++ +M   G+ PD  TYSLLID Y   G
Sbjct: 180 VIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIG 239

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R   AR +   M      P+++ Y  +L GY  +G       +L  M   G+  + H +N
Sbjct: 240 RCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFN 299

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++I  + K   L  AM AF  M  +G  P+ +T+ T+ID   K GR + A   F +M   
Sbjct: 300 ILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE 359

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR---- 560
           G  P   T+  +I+ L     W+ V++L   M  +G+ PN +   T++D   + GR    
Sbjct: 360 GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEA 419

Query: 561 ---FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
              FD  I                  CL+G  D+++     M + GL+P N+  ++L+N 
Sbjct: 420 HDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNG 479

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           + ++ R  +A A+ + M    +KP+ +TY  ++  L    +
Sbjct: 480 YCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 214/505 (42%), Gaps = 84/505 (16%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
           L+YN +I+   +  +++KA  L  +M   G+  + + Y+ VI  L +   +D +  +LQ+
Sbjct: 140 LSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQ 199

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           ++     DK    GQL               +A+R L    G GL P   TY+ +I    
Sbjct: 200 MF-----DK----GQL--------------EEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             GR  EA  +F+ +   G  P    Y  LL GY   G L D   +++ M + G+  ++H
Sbjct: 237 KIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH 296

Query: 372 TYSLLIDAYAN-----------------------------------AGRWESARIVLKEM 396
            +++LI AYA                                    AGR E A     +M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   ++ ++ G    GEW++  ++  EM + G+ P+  F N ++D+  K   +
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   FD+++  G++PD +++  LID +   G+ D + +L   M   G  P   TY+ +
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-----------FDDAI 565
           +N   +  R +D   L   M ++ + PN +TY  ++     +GR            D  I
Sbjct: 477 LNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI 536

Query: 566 E-------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           +             C     D+A+  F+ +R+   +      N +I    +  R  +A +
Sbjct: 537 QLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKS 596

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI 637
           +   +  +GL PD + Y  ++++ I
Sbjct: 597 LFSAILPSGLVPDAIIYGLMIQSHI 621



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 223/534 (41%), Gaps = 67/534 (12%)

Query: 159 CYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACAR-------- 205
           C    L Y+++I+ L   G  +K Y  F     Q   P  +TYN++I    +        
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 206 --------NDDLEKALNLMSKMRQDGYHCDFINYSLVIQ------SLTRTNKIDSSLLQK 251
                      LE+A+ L+ KM   G   D + YSL+I         T    I  S++++
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 252 ---------------------------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
                                      L   +  D I L+  + N +I  +AK     KA
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKA 314

Query: 285 MR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           M  F+ M Q  G SP   TY  VI  L  +GR  +A + F ++   GL P    + +L+ 
Sbjct: 315 MTAFIEMRQK-GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIH 373

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G   +G  K  E +  EM   G+ P+    + ++D+    GR   A     ++     KP
Sbjct: 374 GLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKP 433

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ ++ GY   G+   + ++L  M S G+ PD   Y+ +++ + K   +  A+A +
Sbjct: 434 DVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALY 493

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M S+ ++P+ IT+N ++   F  GR   A E + ++ + G      TYNI++  L E 
Sbjct: 494 REMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCEN 553

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
              ++  R+   +R++     V T+  ++    + GR  D           A + F  + 
Sbjct: 554 SFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGD-----------AKSLFSAIL 602

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             GL P  +    +I +  E+    E+  +   M++NG   +  T   +++ L+
Sbjct: 603 PSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLL 656



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 172/409 (42%), Gaps = 51/409 (12%)

Query: 166 YSILIHALGRSEKLYE-----AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  L+H       L +     A ++     L    +N LI A A+N+ L+KA+    +MR
Sbjct: 263 YRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G+  + + Y+ VI  L +  +++ ++    + ++  + +  D      +I G    G+
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSH--FSQMVSEGLSPDIITFTSLIHGLCTIGE 380

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             K  +        G+ P       ++ +L   GR +EA   F+++   G+KP   +Y  
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G + ++  ++  M   G+ PD  TYS L++ Y   GR + A  + +EM    
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500

Query: 401 AKPNSFIYSRILAGYRDRG--------------------------------------EWQ 422
            KPN+  Y+ IL G    G                                      E  
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEAL 560

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           R FQ L+   S   + +   +N+MI    K   +  A + F  +L  G+ PD I +  +I
Sbjct: 561 RMFQGLR---SKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             H + G  + ++ELF  M++ G    + T N ++  L E+    DV+R
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEK---GDVRR 663



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 37/303 (12%)

Query: 369 DEHTYSLLIDAYANAG----------RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           D  T+ +LI  + N G          R   A + +   +  +  PN   Y+ ++ G    
Sbjct: 93  DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKE 152

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-------- 470
           GE  + + +  EM   G  P+   YN +ID   K   +  A A   +M  +G        
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRL 212

Query: 471 --------IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
                   ++PD +T++ LID + K GR   A  +F+ M  RG  P   TY  +++    
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYAT 272

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           +    D+  LL  M   G+      +  L+  Y ++       E L    D+A+ AF  M
Sbjct: 273 KGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKN-------ETL----DKAMTAFIEM 321

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           R  G  P+ +   ++I+   +  R  +A +    M   GL PD++T+T+L+  L  + ++
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 643 HKV 645
            KV
Sbjct: 382 KKV 384



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 50/275 (18%)

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM--------AAFDRMLSEG--IEPD 474
           F  + ++  + +  D   + ++I  F     L  A+        AA   M  +G    P+
Sbjct: 79  FNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPN 138

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE---------- 524
            +++N +I+  FK G  D+A  LF EM  +G+ P   TYN +I+ L + +          
Sbjct: 139 VLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQ 198

Query: 525 ------RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                 + E+  RLL  M   GL P+VVTY+ L+D Y + GR  +A    + +  +  N 
Sbjct: 199 QMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNP 258

Query: 579 ------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                                     +M  DG+   +   N LI A+ +++   +A    
Sbjct: 259 DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAF 318

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             M++ G  P+VVTYTT++  L +  +     S +
Sbjct: 319 IEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHF 353



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 4/262 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++Y  LI     +  +++++ L+ +M   G   D + YS ++    +  ++D +L   LY
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL--ALY 493

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    ++ +    N ++ G   AG    A  F       G+     TY  V+  L  +
Sbjct: 494 REMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCEN 553

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  +F+ L+    +   + +N ++ G +K+G + DA+ + S +  SG++PD   Y
Sbjct: 554 SFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIY 613

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-- 431
            L+I ++   G  E +  +   ME +    NS   + I+    ++G+ +R    L ++  
Sbjct: 614 GLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDE 673

Query: 432 KSSGVEPDTHFYNVMIDTFGKY 453
           K   VE  T    + I +  KY
Sbjct: 674 KEYSVEASTAVLLISIVSERKY 695


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 222/489 (45%), Gaps = 47/489 (9%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLY 253
           +N L++A  R    +  +++  KM   G  C     +++I  L   + +    S+L K++
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166

Query: 254 K----------EIECDKIELDGQLLND---------------------VIVGFAKAGDAS 282
           K              + + ++G+++                       ++ G  K G  S
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A+ ++     +   P+  +Y+ +I +L  +    EA  +F  ++  G+ P    YN+L+
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G    G  K A  +  EM    + PD  T+S+L+DA    G    A  V  +M     +
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+   YS ++ G      W+ +  +L EM S  + PD   +++ +D F K   +  A + 
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            + M+  G+ P+ +T+N+L+D +    + D A ++F+ M  +G  P   +YNI+I    +
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCK 466

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
            ER ++ K+L   M  +GL PN +T+TTL+    Q+GR   A E            F+ M
Sbjct: 467 SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE-----------LFKKM 515

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            + G  P  +  ++L++ F +     EA A+ + +K++ LKP+ V    L+  + +  K 
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575

Query: 643 H---KVFSS 648
               ++FSS
Sbjct: 576 EDAKELFSS 584



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 190/412 (46%), Gaps = 7/412 (1%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI+ L    ++ EA     +++S+  + T  T+  +++   +      A+  M KM 
Sbjct: 177 FNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMV 236

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     + ++YS++I SL +   ++ ++   L+  +    I       N +I G   +G 
Sbjct: 237 ELDCEPEVVSYSIIIDSLCKNRLVNEAV--DLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A           + P   T++ ++ AL   G  +EA +VF ++ +  ++P    Y++
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K    K++  +++EM    + PD  T+S+ +D +   G    A+ ++  M    
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +PN   Y+ ++ GY    +     +V   M + G  PD   YN++I  + K   +  A 
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M  +G+ P++IT  TLI    + GR   A+ELF++M   G  P   TY+ +++  
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF 534

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +    ++   L   ++   L PN V    L+    ++G+ +DA E    LS
Sbjct: 535 CKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLS 586



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/418 (22%), Positives = 160/418 (38%), Gaps = 94/418 (22%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV----------- 366
           +A A F ++      P    +N LL   V+M +      +  +ME  GV           
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 367 ------------------------LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
                                    P   T++ LI+     GR   A   L  +     +
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P  + ++ I+ G    G+       +K+M     EP+   Y+++ID+  K   ++ A+  
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  M S GI P  +T+N+LI      G++ +A  LF+EM E    P   T++I+++ L +
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326

Query: 523 Q-----------------------------------ERWEDVKRLLGNMRAQGLLPNVVT 547
           +                                     W++   LL  M ++ + P+VVT
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386

Query: 548 YTTLVDIYGQSGRFDDA-------IE-----------------CLEGLSDQAVNAFRVMR 583
           ++  VD++ + G   +A       IE                 CL    D+A   F +M 
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             G  P  L+ N LI  + + +R  EA  +   M   GL P+ +T+TTL+  L +  +
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D A   F +M     FPC T +N ++  L   + ++ V  +   M   G+  +V T T 
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L++             C   L     +    +   G KPS +  N+LIN    + R  EA
Sbjct: 145 LINCL-----------CHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEA 193

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
              L Y+   G +P V T+T ++  L ++ K
Sbjct: 194 MEQLDYIMSRGYQPTVYTHTMIVNGLCKIGK 224



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 11/188 (5%)

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           G ++    A+A F++M+     P    +N L+    +   YD    ++ +M+  G     
Sbjct: 80  GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            T  I+IN L           +LG +   G  P+++T+ TL++             C+EG
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL-----------CIEG 188

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
              +A+     + + G +P+      ++N   +  + + A   ++ M E   +P+VV+Y+
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248

Query: 631 TLMKALIR 638
            ++ +L +
Sbjct: 249 IIIDSLCK 256


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 235/516 (45%), Gaps = 31/516 (6%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQR 188
           ++K LC  N  +D A A++  + +H  C    ++Y  LIHAL   GR  ++ +       
Sbjct: 223 VMKALCLVNE-VDSACALLKDMTRHG-CVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLL 280

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
               P   T+N  I    +   + +A  L+ +M   G+  +   Y +++  L R  K+D 
Sbjct: 281 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 340

Query: 247 S--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAG--DASKAMRFLGMAQGVGLSPKTAT 302
           +  LL K+           +  L N +I G+   G  D +KA+    M   VG  P   T
Sbjct: 341 ARMLLNKVPNP--------NVVLFNTLINGYVSRGRLDEAKAVMHESMLS-VGCGPDIFT 391

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L   G  + A  +  E++  G +P    Y  L+  + K G L++A  V+ EM 
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+  +   Y+ LI A     + + A  +  +M     KP+ F ++ ++ G     +++
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               + ++M   GV  +T  YN +I  F +   +  A+   + ML  G   D IT+N LI
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               + G  ++   LFE+M  +G  P   + NI+IN L      +     L +M  +GL 
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 631

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++VTY +L++   ++GR           + +A+N F  ++ +G+ P  +  N+LI+   
Sbjct: 632 PDIVTYNSLINGLCKTGR-----------AQEALNLFDKLQVEGICPDAITYNTLISWHC 680

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++    +A  +L    ++G  P+ VT+  L+   I+
Sbjct: 681 KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 716



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 214/467 (45%), Gaps = 18/467 (3%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +LS+    T  T+  ++ A    ++++ A  L+  M + G   + I Y  +I +L +  +
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++   + KL +E+       D    ND I G  K     +A + +      G +P + TY
Sbjct: 268 VNE--VLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY 325

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE-ME 362
             ++  L   G+  EA  +  ++      P    +N L+ GYV  G L +A+ V+ E M 
Sbjct: 326 GVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESML 381

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  PD  TY+ LI      G   SAR ++ EM++   +PN   Y+ ++  +   G  +
Sbjct: 382 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 441

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               VL EM   G+  +   YN +I    K   +  A+  F  M S+G +PD  T+N+LI
Sbjct: 442 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 501

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K  +++ A  L+++M   G    T TYN +I+    +   ++  +L+ +M  +G  
Sbjct: 502 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 561

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            + +TY  L+    ++G  +      +GL+      F  M + GL P+N++ N LIN   
Sbjct: 562 LDDITYNGLIKALCRAGNIE------KGLA-----LFEDMMSKGLNPNNISCNILINGLC 610

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                  A   L+ M   GL PD+VTY +L+  L +  +  +  + +
Sbjct: 611 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 657



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 186/396 (46%), Gaps = 4/396 (1%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK-MRQDG 223
           Y +L+H L R  K+ EA  LL++      + +N LI+       L++A  +M + M   G
Sbjct: 325 YGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVG 384

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   Y+ +I  L +   + S+  ++L  E++    E +      +I  F K G   +
Sbjct: 385 CGPDIFTYNTLILGLCKKGYLVSA--RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 442

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A   L    G GL+     Y  +I+AL    +  +A  +F ++   G KP    +N+L+ 
Sbjct: 443 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 502

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K+   ++A  +  +M   GV+ +  TY+ LI A+   G  + A  ++ +M       
Sbjct: 503 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 562

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ ++      G  ++   + ++M S G+ P+    N++I+   +   + HA+   
Sbjct: 563 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 622

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+  G+ PD +T+N+LI+   K GR   A  LF+++Q  G  P   TYN +I+   ++
Sbjct: 623 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 682

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             ++D   LL      G +PN VT+  LV  + + G
Sbjct: 683 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 208/478 (43%), Gaps = 23/478 (4%)

Query: 177 EKLYEAFLLSQ-RQRLTPLTYNALISACARNDDLEKALNLMS-KMRQDGYHCDFINYSLV 234
           E+L + F L + R  LT +T   L        D+  ++ L      Q GY   F  Y ++
Sbjct: 58  ERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYML 117

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  L    +  +  +  L  +++ + I     L   ++  + +AG   +A R L   +GV
Sbjct: 118 IDKLGAAGEFKT--IDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGV 175

Query: 295 -GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
               P   +Y  V+  L           VF E+   G+ P    +  ++K    +  +  
Sbjct: 176 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 235

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ +M R G +P+   Y  LI A    GR      +L+EM +    P+   ++  + 
Sbjct: 236 ACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 295

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-E 472
           G           +++  M   G  P++  Y V++    +   +  A     RML   +  
Sbjct: 296 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA-----RMLLNKVPN 350

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           P+ + +NTLI+ +   GR D A+ +  E M   G  P   TYN +I  L ++      + 
Sbjct: 351 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 410

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L+  M+ +G  PNV+TYT L+D + + GR ++A   L+ +S +           GL  + 
Sbjct: 411 LMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-----------GLALNA 459

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  N LI+A  +D++  +A  +   M   G KPD+ T+ +L+  L +V+KF +    Y
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 517



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 7/227 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L +  K  EA  L Q   L       +TYN LI A  R   +++AL L++ M 
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I++L R   I+  L   L++++    +  +    N +I G  + G+
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGL--ALFEDMMSKGLNPNNISCNILINGLCRTGN 614

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+ FL      GL+P   TY ++I  L  +GR  EA  +F++L+  G+ P    YN 
Sbjct: 615 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 674

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           L+  + K G   DA  ++S    SG +P+E T+ +L+  +   G  E
Sbjct: 675 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 7/262 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL + EK+ +A      + S+  +    T+N+LI    + +  E+AL L   M 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + I Y+ +I +  R   +  +L  KL  ++      LD    N +I    +AG+
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEAL--KLVNDMLFRGCPLDDITYNGLIKALCRAGN 579

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             K +         GL+P   +   +I  L  +G    A     ++   GL P    YN+
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++A  +  +++  G+ PD  TY+ LI  +   G ++ A ++L     S 
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699

Query: 401 AKPNSFIYSRILAGYRDRGEWQ 422
             PN   +  +++ +   G+ +
Sbjct: 700 FIPNEVTWYILVSNFIKEGDQE 721


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 16/392 (4%)

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++  D+     ++L   I  FA+AG  ++A   L  A     +P  + Y A+++A S +
Sbjct: 142 RDLHGDRALHHPRVLPTAIRVFARAGCLAEASAILEAAP----APDASAYTALVSAFSRA 197

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAEFVVSEMERSGVLPDEHT 372
           GR  +A AVF+ + + G++P    YN +   Y KM    K+   +V  M+  G+  D +T
Sbjct: 198 GRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYT 257

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LI      G    A  V  EM+ +  +P+   ++ +L  Y    + +    VLK M+
Sbjct: 258 YNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRME 317

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           ++G  P    YN +I  + K   L  A+     M   G++PD +T+ TLI    + G+ D
Sbjct: 318 NAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKID 377

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A   + EM   G  P   TYN +I L G + ++ ++  +  ++R+ G +P+VVT+ TL+
Sbjct: 378 AALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLL 437

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            ++GQ+           GL  +    F+ M+  G  P      SLI+++       +A  
Sbjct: 438 SVFGQN-----------GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAME 486

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + + M E G+ PD+ TY  ++ AL R  ++ +
Sbjct: 487 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQ 518



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 213/476 (44%), Gaps = 25/476 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y AL+SA +R      A+ +  +M   G     + Y++V  + ++ + +    +  L   
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMS-VPWKEVVALVDS 245

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++ D IE D    N +I    + G   +A +     +  G  P   T+ +++     + +
Sbjct: 246 MKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARK 305

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V + ++ +G  P    YN+L+  YVK G L++A  +  EME  G+ PD  TY+ 
Sbjct: 306 HEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 365

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI      G+ ++A     EM  +   PN   Y+ ++  +  RG++     V  +++S+G
Sbjct: 366 LISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAG 425

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+ +LI  + +CG +D+A 
Sbjct: 426 YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 485

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+++ M E G +P  +TYN +++ L    RWE  ++L   M  +   P+ ++Y++L+  Y
Sbjct: 486 EIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAY 545

Query: 556 GQSGRFDDAIECLEG-----------------LSDQAVN-------AFRVMRTDGLKPSN 591
             + + D      E                  L +  VN       AF+ +R        
Sbjct: 546 ANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDI 605

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
             LN++++ +G+++   +   VL  M EN +     TY +LM    R+    K  S
Sbjct: 606 NVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCES 661



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 217/480 (45%), Gaps = 53/480 (11%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G++ K  EA  + +R      TP  +TYN+LISA  ++  LE+AL L  
Sbjct: 290 KVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQ 349

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + Y+ +I  L R  KID++L    Y E+  +                  
Sbjct: 350 EMEFRGMKPDVVTYTTLISGLDRVGKIDAALAT--YSEMVRN------------------ 389

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                            G SP   TY A+I      G+  E  AVF++L+ +G  P    
Sbjct: 390 -----------------GCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVT 432

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N LL  + + G   +   V  EM+++G +P+  TY  LI +Y+  G ++ A  + K M 
Sbjct: 433 WNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI 492

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P+   Y+ +L+     G W++  ++  EM     +PD   Y+ ++  +     L 
Sbjct: 493 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLD 552

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                 + + +E IE       TL+  + K       E+ F+E++ R         N M+
Sbjct: 553 KMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMV 612

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           ++ G+ +  + V+ +L  M    +  +  TY +L+ +Y    R  D  +C   L++    
Sbjct: 613 SIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYS---RLGDCEKCESILTE---- 665

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               +++ G++P   + N++I A+G   +  EA  +   MK +G+KPD+VTY   +K+ +
Sbjct: 666 ----IKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 721



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I   + +G   EA A+ E    +   P   AY AL+  + + G  +DA  V   M   GV
Sbjct: 160 IRVFARAGCLAEASAILE----AAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV 215

Query: 367 LPDEHTYSLLIDAYANAG-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            P   TY+++  AY+     W+    ++  M+    + + + Y+ +++  R RG  +   
Sbjct: 216 QPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAA 275

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           QV  EMK++G EPD   +N ++D +GK      A+    RM + G  P  +T+N+LI  +
Sbjct: 276 QVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAY 335

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  + A EL +EM+ RG  P   TY  +I+ L    + +        M   G  PN+
Sbjct: 336 VKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNL 395

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            TY  L+ ++G  G+F + +   + L           R+ G  P  +  N+L++ FG++ 
Sbjct: 396 CTYNALIKLHGVRGKFTEMMAVFDDL-----------RSAGYVPDVVTWNTLLSVFGQNG 444

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            D+E   V + MK+ G  P+  TY +L+ +  R   F +    Y
Sbjct: 445 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIY 488



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 170/411 (41%), Gaps = 42/411 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L R  K+  A        R   +P   TYNALI          + + +   +R
Sbjct: 363 YTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLR 422

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             GY  D + ++ ++ S+   N +DS +   ++KE++      +      +I  +++ G 
Sbjct: 423 SAGYVPDVVTWNTLL-SVFGQNGLDSEV-SGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM         G+ P  +TY AV++AL+  GR  +AE +F E+ +   KP   +Y++
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSS 540

Query: 341 LLKGYV-----------------------------------KMGYLKDAEFVVSEMERSG 365
           LL  Y                                    K+  L + E    E+ R  
Sbjct: 541 LLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
              D +  + ++  Y      +    VL  M  +    ++  Y+ ++  Y   G+ ++  
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCE 660

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L E+KSSG+ PD + YN +I  +G+   +  A   F  M   G++PD +T+N  I  +
Sbjct: 661 SILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSY 720

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
                ++ A +L   +  +G  P   T+N ++       R  + K  L N+
Sbjct: 721 VANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAKSFLSNL 771


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 212/473 (44%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y AL+S  +R      A+ +  +M   G     + Y++V+   ++ + +    +  L   
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMS-VPWKEVVVLVDS 246

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++ D IELD    N +I    + G   +A +     +  G  P   T+ +++     + R
Sbjct: 247 MKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARR 306

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V ++++ +G  P    YN+L+  YVK G L++A  +  EME  G+ PD  TY+ 
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI      G+ ++A     EM  +   PN   Y+ ++  +  RG++     V  +++S+G
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+ +LI  + +CG +D+A 
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+++ M E G +P  +TYN +++ L    RW   ++L   M  +   P+ ++Y++L+  Y
Sbjct: 487 EIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY 546

Query: 556 GQSGRFDDAIECLEGLSDQAV------------------------NAFRVMRTDGLKPSN 591
             + + D      E +  Q +                         AF+ +R        
Sbjct: 547 ANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDI 606

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++++ +G+++   +   VL  MKEN +     TY +LM    R+    K
Sbjct: 607 NVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEK 659



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 214/481 (44%), Gaps = 18/481 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMS 217
           ++ ++ L+   G++ +  EA  + ++      TP  +TYN+LISA  ++  LE+AL L  
Sbjct: 291 KVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQ 350

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   D + Y+ +I  L R  KID++L    Y E+  +    +    N +I     
Sbjct: 351 EMEFRGMKPDVVTYTTLISGLDRIGKIDAALAT--YSEMVRNGCSPNLCTYNALIKMHGV 408

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  ++ M      +  G  P   T+  ++     +G   E   VF+E+K++G  P    
Sbjct: 409 RGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 468

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+  Y + G    A  +   M  +G+ PD  TY+ ++ A A  GRW  A  +  EME
Sbjct: 469 YVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME 528

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   YS +L  Y +  +  +   + +++ +  +EP       ++    K N L 
Sbjct: 529 DRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLS 588

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               AF  +       D    N ++  + K     + EE+   M+E        TYN ++
Sbjct: 589 ETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLM 648

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           ++       E  + +L  +++ G+ P+  +Y T++  YG+ G+             +A  
Sbjct: 649 HMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMK-----------EASR 697

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M+  G+KP  +  N  I ++  +    EA  +++Y+   G KP+  TY ++++   
Sbjct: 698 LFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYC 757

Query: 638 R 638
           R
Sbjct: 758 R 758



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 169/343 (49%), Gaps = 12/343 (3%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKDAE 355
           +P  + Y A+++  S +GR  +A AVF  + + G++P    YN +L  Y KM    K+  
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            +V  M+  G+  D +TY+ LI      G +  A  +  EM+ +  +P+   ++ +L  Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                 +    VLK+M+++G  P    YN +I  + K   L  A+     M   G++PD 
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +T+ TLI    + G+ D A   + EM   G  P   TYN +I + G + ++ ++  +  +
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           +R+ G +P+VVT+ TL+ ++GQ+           GL  +    F+ M+  G  P      
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQN-----------GLDSEVSGVFKEMKKAGYIPERDTYV 470

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           SLI+++       +A  + + M E G+ PD+ TY  ++ AL R
Sbjct: 471 SLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 513



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/502 (22%), Positives = 207/502 (41%), Gaps = 96/502 (19%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LIS C R     +A  +  +M+  G+  D + +                       
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTF----------------------- 294

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                         N ++  + KA    +A+  L   +  G +P   TY ++I+A    G
Sbjct: 295 --------------NSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDG 340

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  + +E++  G+KP    Y  L+ G  ++G +  A    SEM R+G  P+  TY+
Sbjct: 341 LLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYN 400

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI  +   G++    IV  ++  +   P+   ++ +LA +   G       V KEMK +
Sbjct: 401 ALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 460

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   Y  +I ++ +      AM  + RM+  GI PD  T+N ++    + GR+ +A
Sbjct: 461 GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQA 520

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP----------- 543
           E+LF EM++R   P   +Y+ +++     ++ + +K L  ++ AQ + P           
Sbjct: 521 EKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLV 580

Query: 544 ------------------------NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-- 577
                                   ++     +V IYG++       E L  + + ++N  
Sbjct: 581 NNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHS 640

Query: 578 ----------------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                                     +++ G++P   + N++I A+G   +  EA  +  
Sbjct: 641 AATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFS 700

Query: 616 YMKENGLKPDVVTYTTLMKALI 637
            MK +G+KPD+VTY   +K+ +
Sbjct: 701 EMKCSGVKPDIVTYNIFIKSYV 722



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 153/318 (48%), Gaps = 12/318 (3%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG-RWESARI 391
           P   AY AL+  + + G  +DA  V   M   GV P   TY++++  Y+     W+   +
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           ++  M+    + + + Y+ +++  R RG ++   Q+  EMK++G EPD   +N ++D +G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K      A+    +M + G  P  +T+N+LI  + K G  + A EL +EM+ RG  P   
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY  +I+ L    + +        M   G  PN+ TY  L+ ++G  G+F + +   + L
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                      R+ G  P  +  N+L+  FG++  D+E   V + MK+ G  P+  TY +
Sbjct: 423 -----------RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVS 471

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+ +  R   F +    Y
Sbjct: 472 LISSYSRCGLFDQAMEIY 489



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 175/414 (42%), Gaps = 48/414 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L R  K+  A        R   +P   TYNALI          + + +   +R
Sbjct: 364 YTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLR 423

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             GY  D + ++ ++    + N +DS +   ++KE++      +      +I  +++ G 
Sbjct: 424 SAGYVPDVVTWNTLLAVFGQ-NGLDSEV-SGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM         G+ P  +TY AV++AL+  GR ++AE +F E+++   KP   +Y++
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541

Query: 341 LLKGYV-----------------------------------KMGYLKDAEFVVSEMERSG 365
           LL  Y                                    K+  L + E    E+ R  
Sbjct: 542 LLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRR 601

Query: 366 VLPDEHTYSLLIDAYAN---AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
              D +  + ++  Y       + E    ++KE  ++H+   +  Y+ ++  Y   G+ +
Sbjct: 602 CSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHS---AATYNSLMHMYSRLGDCE 658

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   +L E+KSSG+ PD + YN +I  +G+   +  A   F  M   G++PD +T+N  I
Sbjct: 659 KCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 718

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
             +     ++ A +L   +  +G  P   TYN ++       R  + K  L N+
Sbjct: 719 KSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 3/211 (1%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKA 212
           ++ HN      +L +  +++L  +EK ++  L  +R  L     NA++S   +N  ++K 
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQE-LRRRRCSLDINVLNAMVSIYGKNKMVKKV 625

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
             +++ M+++  +     Y+ ++   +R    D    + +  EI+   +  D    N VI
Sbjct: 626 EEVLTLMKENSINHSAATYNSLMHMYSRLG--DCEKCEAILTEIKSSGMRPDRYSYNTVI 683

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             + + G   +A R     +  G+ P   TY   I +   +    EA  +   L   G K
Sbjct: 684 YAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCK 743

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           P  + YN++L+GY + G + +A+  +S + +
Sbjct: 744 PNERTYNSILEGYCRHGRMVEAKSFLSNLPK 774


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 249/598 (41%), Gaps = 107/598 (17%)

Query: 131 SLLKNLCSSNSSIDLAY--AVVSWLQKH----------------NLCYSYELLYSILIHA 172
           SLL  + S    +DL    A++ WL K                 NL  +  + Y++LI A
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLN-GVTYTVLIDA 388

Query: 173 LGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L ++  + EA    L  + + ++P  +T++++I+   +   L+KA      M++ G + +
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + Y  +I    +    D++L  ++Y ++ C+ +E++  +++ ++ G  + G   +AM  
Sbjct: 449 VVTYGTLIDGFFKFQGQDAAL--EVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
              A G GLS     Y  +I  L  +G    A    +EL +  + P    YN  +     
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  K+A+ +++EM   G+ PD+ TY+ +I ++   G    A  +L EM++S  KPN   
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEP----------------------------- 438
           Y+ ++AG    G  ++   +L EM S+G  P                             
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMM 686

Query: 439 ------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK----- 487
                 D   YN ++     +     A    + ML  GI PDTIT+N LI  H K     
Sbjct: 687 NAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLD 746

Query: 488 ------------------------------CGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
                                          GR   A  +  EM++ G  P   TY+I++
Sbjct: 747 NAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILV 806

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
              G+Q    +  RL   M  +G +P V TY  L+  + ++           G+  QA  
Sbjct: 807 TGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA-----------GMMTQAKE 855

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
            F+ M+  G+ P++   + L++ +   +   E    L+ MKE G  P   T + + +A
Sbjct: 856 LFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 215/482 (44%), Gaps = 25/482 (5%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           L+++  R   L  A  L +  R T + YN L++A +   D   A  ++++M + G   D 
Sbjct: 79  LLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDG 135

Query: 229 INYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
           +  + ++  L R  ++D++  L      I      LD    N +I G+ + GD   A+  
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRGGGIH----ALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                  GL      Y  ++     +G+   A  V + +KE+G+ P    Y   +  Y +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              +++A  +   M R+GVL D  T S L+      GR+  A  + +EM+   A PN   
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVT 311

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++      G  +    +L EM S GV  D   Y  ++D  GK              L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE 524
           S+ +  + +T+  LID   K    D AE++  EM+E+   P   T++ +IN     G  +
Sbjct: 372 SDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           +  + KR+   M+ +G+ PNVVTY TL+D     G F       +G  D A+  +  M  
Sbjct: 432 KATEYKRM---MKERGINPNVVTYGTLID-----GFFK-----FQG-QDAALEVYHDMLC 477

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +G++ +   ++SL+N   ++ +  EA A+ +    +GL  D V YTTL+  L +      
Sbjct: 478 EGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 645 VF 646
            F
Sbjct: 538 AF 539



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L ++  +  AF   Q    + + P  + YN  I+        ++A +++++MR
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR 581

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+ +I S  R  +   +L  KL  E++   I+ +    N ++ G    G 
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKAL--KLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G SP + T+  V+ A S S R      + E +  +GL      YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+     G  + A  V+ EM  SG+ PD  T++ LI  +  +   ++A     +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   ++ +L G    G       VL EM+ SG+EP+   Y++++   GK +    AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAM 819

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  M+ +G  P   T+N LI    K G   +A+ELF++MQ+RG  P + TY+I+++  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
                  +VK+ L +M+ +G  P+  T + +   + + G
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 126/550 (22%), Positives = 225/550 (40%), Gaps = 33/550 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-----CYSYELLYSILIHALGRSEKLYEAF 183
           +++L+   C +   +D A  V+  +++  +      Y+  ++Y      +  +  LYE  
Sbjct: 207 YNTLVAGFCRA-GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG- 264

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++     L  +T +AL++   R+    +A  L  +M + G   + + Y  +I SL +  +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGR 324

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                L  L  E+    + +D      ++    K G   +    L  A    LS    TY
Sbjct: 325 --GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTY 382

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I AL  +    EAE V  E++E  + P    +++++ G+VK G L  A      M+ 
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+  TY  LID +      ++A  V  +M     + N FI   ++ G R  G+ + 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEE 502

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + K+   SG+  D   Y  +ID   K   +  A      ++   + PD + +N  I+
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           C    G++  A+ +  EM+  G  P  +TYN MI     +       +LL  M+   + P
Sbjct: 563 CLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNAFRV----------------- 581
           N++TY TLV     +G  + A   L      G S  ++   RV                 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M   GL       N+L+          +A  VL+ M  +G+ PD +T+  L+    + 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 640 DKFHKVFSSY 649
                 F++Y
Sbjct: 743 SHLDNAFATY 752



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 223/544 (40%), Gaps = 72/544 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTP---LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+IL+ AL  S+  +   +L++  +R  P   +T N L++   RN  ++ A  L    R 
Sbjct: 106 YNILLAAL--SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RG 161

Query: 222 DGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            G H  D I ++ +I    R     ++L   +   +    + +D    N ++ GF +AG 
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAAL--SVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 281 ASKAMRFLGMAQGVGLSPKTATY-----------------------------------AA 305
              A   L M +  G+ P  ATY                                   +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   GR  EA A+F E+ + G  P    Y  L+    K G  K+   ++ EM   G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V+ D  TY+ L+D     G+ +  +  L+     +   N   Y+ ++             
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDC 484
           QVL EM+   + P+   ++ +I+ F K   L  A   + RM+ E GI P+ +T+ TLID 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTLIDG 458

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            FK    D A E++ +M   G        + ++N L +  + E+   L  +    GL  +
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
            V YTTL+D   ++G    A +                        C+ G   +A +   
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILT 578

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            MR  GLKP     N++I +       A+A  +L  MK + +KP+++TY TL+  L    
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 641 KFHK 644
              K
Sbjct: 639 AVEK 642



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 136/331 (41%), Gaps = 51/331 (15%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P T AYN LL       +   A  V++EM + GV  D  T + L+      G+ ++A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-- 154

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
                                A   DRG       V+              +N +I  + 
Sbjct: 155 ---------------------AALADRGGGIHALDVIG-------------WNTLIAGYC 180

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +      A++  DRM ++G+  D + +NTL+    + G+ D A  + + M+E G  P   
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY   I      +  E+   L   M   G+L +VVT + LV    + GRF +A       
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL---- 296

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                  FR M   G  P+++   +LI++  +  R  E  ++L  M   G+  D+VTYT 
Sbjct: 297 -------FREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349

Query: 632 LMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           LM  L +  K  +V  + L F +   LS +G
Sbjct: 350 LMDWLGKQGKTDEVKDT-LRFALSDNLSLNG 379



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 124/273 (45%), Gaps = 7/273 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILI-HALGRSEKLY 180
           P+ L H  +   CS +  +D+   +  W+    L      Y  L  +L  H + R   + 
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              +L        +T+NALI    ++  L+ A    ++M       +   ++ ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I  +    +  E+E   +E +    + ++ G  K  +  +AMR      G G  PK 
Sbjct: 777 VGRIGEA--GTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY A+I+  + +G   +A+ +F+++++ G+ P +  Y+ L+ G+ ++    + +  + +
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKD 894

Query: 361 MERSGVLPDEHTYSLLIDAYANAG-RWESARIV 392
           M+  G  P + T S +  A++  G  W++ R++
Sbjct: 895 MKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/539 (25%), Positives = 233/539 (43%), Gaps = 67/539 (12%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQRLTPL----------------TYNALISACARND 207
           ++ L+H L R+ + ++A   L S      PL                +++ L+ A A   
Sbjct: 103 HAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAG 162

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
            L  ALN+   M + G      + + ++  L ++   D  +   +Y ++    +  D   
Sbjct: 163 QLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG--DPGMAAMVYGQMRIAGVLPDEFT 220

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           +  +   + + G  ++A+ F+   +G+GL      Y AV+      G T +A  + E L+
Sbjct: 221 VAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQ 280

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-VLPDEHTYSLLIDAYANAGRW 386
             GL P    Y  L+KGY K G +++AE VV EM+ +G ++ DE  Y ++I+ Y   GR 
Sbjct: 281 RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRM 340

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V  EM  +    N F+Y+ ++ G    G  +   +VL+EM+  G+ PD + YN +
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 447 IDTFGK-------------------------YN------CLHHAMAAFDR----MLSEGI 471
           ID + +                         YN      C  HA+    R    ML  G+
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ I+ +TL+D  FK G+ ++A  L++E   RG      T+N +IN L +  R  + + 
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           LL  M+     P+ +TY TL D Y + G+   A   +             M   G  PS 
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK-----------MEHLGFAPSV 569

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
              NS I      ++  +   +   M   GL P++VTY  L+    +    H+  + Y 
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 229/552 (41%), Gaps = 80/552 (14%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
            +Y+ +I+ L   GR E++ +     +   + P   +YN LI    R   + KA  +   
Sbjct: 360 FVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRM 419

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY----------KEIECDKIELDGQLL 268
           M ++G     + Y+ +++     + ID +L  +L+           EI C  + LDG   
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDAL--RLWFLMLKRGVAPNEISCSTL-LDG--- 473

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
                   KAG   +A+         GL+    T+  VI  L   GR  EAE + + +KE
Sbjct: 474 ------LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
               P +  Y  L  GY K+G L  A  ++++ME  G  P    ++  I  +  A +W  
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +  EM      PN   Y  ++AG+   G       +  EM ++G+ P+    + ++ 
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEP----------------DTIT----------WNTLI 482
            F K   +  A     ++++  + P                DTI           WN +I
Sbjct: 648 CFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVII 707

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K GR   A+ LFE ++ + + P   TY+ +I+        ++   L   M + GL 
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN++TY +L  IYG          C  G   +AVN F  +++ G+ P+ +  N+LI+ + 
Sbjct: 768 PNIITYNSL--IYGL---------CKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 603 EDQRDAEAF----------------AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++ +  EAF                 +L  M EN + P+ +TY TL+   I+     ++ 
Sbjct: 817 KEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 876

Query: 647 SSYLFFNIYKML 658
             Y   +I  +L
Sbjct: 877 KLYDEMHIRGLL 888



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 203/456 (44%), Gaps = 20/456 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y+A++         E A  ++  +++ G   + + Y+L+++   +  +++ +  +++ 
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA--ERVV 311

Query: 254 KEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           KE+ E   I +D      +I G+ + G    A R     +  G+      Y  +I  L  
Sbjct: 312 KEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCK 371

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR  E + V +E+++ G++P   +YN L+ GY + G ++ A  +   M R+G+     T
Sbjct: 372 LGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLT 431

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+  + +    + A  +   M      PN    S +L G    G+ ++   + KE  
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           + G+  +   +N +I+   K   +  A    DRM      PD++T+ TL D + K G+  
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L  +M+  G+ P    +N  I      ++W  V  +   M A+GL PN+VTY  L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                      A  C EG   +A N +  M  +G+ P+    ++L++ F ++ +  EA  
Sbjct: 612 -----------AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           VLQ +    + P     T      I +DK   V  +
Sbjct: 661 VLQKLVNIDMIPGCSIST------IEIDKISHVVDT 690



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 208/516 (40%), Gaps = 55/516 (10%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQSLTRTNK 243
           QR+ L+P  +TY  L+    ++  +E+A  ++ +M++ G    D + Y ++I    +  +
Sbjct: 280 QRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGR 339

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   ++  E+    I ++  + N +I G  K G   +  + L   + VG+ P   +Y
Sbjct: 340 MDDA--TRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSY 397

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I      G   +A  +   +  +GL   T  YN LLKG+  +  + DA  +   M +
Sbjct: 398 NTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLK 457

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV P+E + S L+D    AG+ E A  + KE        N   ++ ++ G    G    
Sbjct: 458 RGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAE 517

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  MK     PD+  Y  + D + K   L  A    ++M   G  P    +N+ I 
Sbjct: 518 AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFIT 577

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            HF   ++ +  ++  EM  RG  P   TY  +I    ++    +   L   M   G+ P
Sbjct: 578 GHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNP 637

Query: 544 NVVTYTTLVDIYGQSGRFDDA--------------------IE----------------- 566
           NV   + L+  + + G+ D+A                    IE                 
Sbjct: 638 NVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPH 697

Query: 567 -------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C  G    A + F  +R     P N   +SLI+         EAF++
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              M   GL P+++TY +L+  L +  K  +  + +
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 96/484 (19%)

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           +HA+  + +L+  FL+ +R  + P  ++ + L+    +    E+ALNL  +    G   +
Sbjct: 442 LHAIDDALRLW--FLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 228 FINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS--- 282
            I ++ VI  L +  ++  +  LL ++ KE+ C    L  + L D      + G A+   
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLM 557

Query: 283 KAMRFLGMAQGV-----------------------------GLSPKTATYAAVITALSNS 313
             M  LG A  V                             GLSP   TY A+I      
Sbjct: 558 NKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKE 617

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP----- 368
           G   EA  ++ E+  +G+ P     +AL+  + K G + +A  V+ ++    ++P     
Sbjct: 618 GNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIS 677

Query: 369 -----------------DEHT----YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
                            + H+    ++++I     +GR   A+ + + +      P++F 
Sbjct: 678 TIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFT 737

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           YS ++ G    G     F +   M S+G+ P+   YN +I    K   L  A+  F+++ 
Sbjct: 738 YSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ 797

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           S+GI P+ IT+NTLID + K G+   A +L ++M E GY                    E
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM-------------------E 838

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +  +LL  M    + PN +TY TL+  Y +SG  ++    +  L D+       M   GL
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEE----ISKLYDE-------MHIRGL 887

Query: 588 KPSN 591
            P+N
Sbjct: 888 LPTN 891



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 124/315 (39%), Gaps = 88/315 (27%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS- 247
           L+P  +TY ALI+   +  +L +A NL  +M  +G + +    S ++    +  K+D + 
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659

Query: 248 -LLQKLYK----------EIECDKIE------LDGQ------LLNDVIVGFAKAGDASKA 284
            +LQKL             IE DKI        DG       + N +I G  K+G  + A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719

Query: 285 M---------RFL-----------GMAQG---------------VGLSPKTATYAAVITA 309
                     RFL           G A                  GL+P   TY ++I  
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY----------------VKMGYLKD 353
           L  SG+   A  +F +L+  G+ P    YN L+  Y                V+ GY+++
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEE 839

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ +M  + V P+  TY  LI  Y  +G  E    +  EM +    P ++I      
Sbjct: 840 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI------ 893

Query: 414 GYRDRGEWQRTFQVL 428
                G W+R+  V+
Sbjct: 894 -----GNWKRSDPVV 903



 Score = 39.7 bits (91), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 60/223 (26%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           F+   + R +P    +S L + C+++ SID A++                L  +++ A  
Sbjct: 723 FESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS----------------LRDVMLSA-- 764

Query: 175 RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
                           LTP  +TYN+LI    ++  L +A+NL +K++  G   + I Y+
Sbjct: 765 ---------------GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYN 809

Query: 233 LVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
            +I    +  K   +  L QK+ +E                       G   +A++ L  
Sbjct: 810 TLIDEYCKEGKTTEAFKLKQKMVEE-----------------------GYMEEAIKLLDQ 846

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                + P   TY  +I     SG   E   +++E+   GL P
Sbjct: 847 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 221/472 (46%), Gaps = 32/472 (6%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           LL Q   LT   +N ++ +  ++      L+L  +M  +G + +F+ ++++I    +   
Sbjct: 59  LLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGL 118

Query: 244 IDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           I    S+L K+ K       E D   LN  I GF   G   +A+ F      +G      
Sbjct: 119 IPFAFSVLAKILKM----GYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQV 174

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  +I  L   G T  A  +   +    ++     YN ++ G  K  ++ DA  + SEM
Sbjct: 175 SYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEM 234

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
               + PD  TYS LI  +   G+ + A  +  +M + + KP+ + ++ ++ G+   G  
Sbjct: 235 VAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRL 294

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++   VL  M    ++P+   +N ++D F K   +      F  M+ +GI+P+ +T+ +L
Sbjct: 295 KKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSL 354

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D +    + ++A+++F  M +RG      +YNIMIN   + ++ +   +L   M  + +
Sbjct: 355 MDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHI 414

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +P+VVTY +L+D   +SG+   A + +  + D+           G  P+ +  NS++N  
Sbjct: 415 IPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR-----------GQPPNIITYNSILN-- 461

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYL 650
                     A+L  +K+ G++P++ T T L+K L +  K     KVF   L
Sbjct: 462 ----------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 28/209 (13%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++ F+ +L +        +N ++    K   Y     L ++M+  G  P   T+NI+IN
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
              +         +L  +   G  P+++T  T +  +   G+   A+             
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 567 ------------CLEGLSDQAVNAFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFA 612
                       C  G +  A+   R  R DG  ++ + +  N++I+   +D+   +AF 
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLR--RVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFD 229

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +   M    + PDVVTY+ L++    V K
Sbjct: 230 LYSEMVAKRISPDVVTYSALIRGFFIVGK 258



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 11/158 (6%)

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I   F     D A  LF  +  +        +N ++  L + + +  V  L   M  +G+
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN VT+  L++ + Q G    A   L           ++++  G +P  + LN+ I  F
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLA----------KILKM-GYEPDIITLNTFIKGF 148

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
               +  +A      +   G   D V+Y TL+  L +V
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKV 186


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 200/439 (45%), Gaps = 13/439 (2%)

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
             + A  +   ++  L +  +M   G      + ++V++ L R  +++ S  +KL KE  
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS--KKLIKEFS 251

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I+ +    N +I  + K  D S     L + +  G+     TY  ++     +G+  
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +AE +F+E++E G++     Y +L+    + G +K A  +  E+   G+ P  +TY  LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D     G   +A I++ EM+         +++ ++ GY  +G       +   M+  G +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D    N +   F +      A     RM+  G++  T+++  LID + K G  + A+ L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F EM  +G  P   TYN+MI    +Q + ++ ++L  NM A G+ P+  TYT+L  I+G 
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL--IHG- 548

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                   EC+    D+A+  F  M   GL  +++    +I+   +  +  EAF +   M
Sbjct: 549 --------ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600

Query: 618 KENGLKPDVVTYTTLMKAL 636
           K  G   D   YT L+ ++
Sbjct: 601 KRKGYTIDNKVYTALIGSM 619



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 2/358 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN +I+A  +  D      ++  M++DG   + + Y+L+++   +  K+  +  +KL+ 
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA--EKLFD 318

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    IE D  +   +I    + G+  +A          GLSP + TY A+I  +   G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               AE +  E++  G+      +N L+ GY + G + +A  +   ME+ G   D  T +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +   +    R++ A+  L  M     K ++  Y+ ++  Y   G  +   ++  EM S 
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV+P+   YNVMI  + K   +  A      M + G++PD+ T+ +LI         D A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             LF EM  +G    + TY +MI+ L +  + ++   L   M+ +G   +   YT L+
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 27/380 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GLS    +    + A     R      +F  + +SG+K    +   +++G  + G ++ +
Sbjct: 184 GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + ++ E    G+ P+ +TY+ +I+AY     +     VLK M+      N   Y+ ++  
Sbjct: 244 KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMEL 303

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G+     ++  EM+  G+E D H Y  +I    +   +  A   FD +  +G+ P 
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           + T+  LID   K G    AE L  EMQ +G       +N +I+    +   ++   +  
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------------------------IECLEG 570
            M  +G   +V T  T+   + +  R+D+A                        + C EG
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             ++A   F  M + G++P+ +  N +I A+ +  +  EA  +   M+ NG+ PD  TYT
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543

Query: 631 TLMKALI---RVDKFHKVFS 647
           +L+        VD+  ++FS
Sbjct: 544 SLIHGECIADNVDEAMRLFS 563


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 214/509 (42%), Gaps = 61/509 (11%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
           + ++ LI   A N  LE A  +  + + DG   + ++ + +++ L   N++D    L + 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L K      I     ++N    G   + D  +A   LG     G +P   TY   I  L 
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A  + + L           +NA++ G  + G L +A  V  EM+ SG+LPD +
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           +YS+LID +   GR + A  V KEM  S   PN + YS ++ G+   G   +  +V +EM
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           K+SG+ PD + Y+++ID F +   +  A+  ++ M S    P    + +LI  ++K  ++
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQF 436

Query: 492 DRAEELFEEMQERGYFPCTT-----------------------------------TYNIM 516
             A + F  MQ+ G +P T                                    +YN  
Sbjct: 437 ANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEF 496

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS---- 572
           I+ +      E   +LL  M  + +LP+VV Y+TL+  + +    + A+     ++    
Sbjct: 497 IHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556

Query: 573 --------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                               D A   F+ M+   + P  +A  SL+  F        A A
Sbjct: 557 TFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARA 616

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +   M   G  P+VVTYT  +   ++++K
Sbjct: 617 LFDEMSREGCSPNVVTYTCFINEYLKLNK 645



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 194/431 (45%), Gaps = 17/431 (3%)

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           NL  K +    HC    ++ VI  L +   +D +   +++KE++   I  D    + +I 
Sbjct: 270 NLCRKNQPLNNHC----FNAVIYGLCQGGILDEA--SEVFKEMKNSGILPDVYSYSILID 323

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF + G   +A       +  G+ P   +Y+ +I      GR  +A  VFEE+K SG+ P
Sbjct: 324 GFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILP 383

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +Y+ L+ G+ + G +  A     EM  +   P    Y  LI  Y  + ++ +A    
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEF 443

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           + M+     P++   + IL+ Y  + ++ +   + ++ + +GV  + + YN  I    + 
Sbjct: 444 RIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRG 503

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           +    A+     ML   + PD + ++TLI C  K    ++A  LF +M + G      TY
Sbjct: 504 SVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY 563

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            I+INL     + +   RL   M+   + P+ + YT+LV  +  +G    A      L D
Sbjct: 564 TILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRA----RALFD 619

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +       M  +G  P+ +     IN + +  ++ +A  + + MKE G+ PD + YT L+
Sbjct: 620 E-------MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672

Query: 634 KALIRVDKFHK 644
            A     + ++
Sbjct: 673 AAFCNTGEMNR 683



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 209/483 (43%), Gaps = 23/483 (4%)

Query: 150 VSWLQKHNLCYSYELL----YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALI 200
           V+W    NLC   + L    ++ +I+ L +   L EA   F   +   + P   +Y+ LI
Sbjct: 263 VAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILI 322

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
               R   +++A  +  +MR  G   +  +YS++I    +  ++D +L  ++++E++   
Sbjct: 323 DGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL--EVFEEMKNSG 380

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           I  D    + +I GF + GD   A++F         SP    Y ++I     S +   A 
Sbjct: 381 ILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANAL 440

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
             F  +++ G+ P T A N +L  Y +      A  +  + + +GV  + ++Y+  I   
Sbjct: 441 KEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRI 500

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
                 E A  +L  M   +  P+   YS +++ +  R   ++   +  +M   G+  + 
Sbjct: 501 CRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNV 560

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             Y ++I+ F     +  A   F  M    + PD I + +L+      G   RA  LF+E
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           M   G  P   TY   IN   +  +     +L   M+ +G+ P+ + YT L+  +  +G 
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGE 680

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDG-LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
            + A    E L D+       M+ +G   P+ +    LIN++ +  +  +A  + + M+ 
Sbjct: 681 MNRA----EALFDE-------MKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRA 729

Query: 620 NGL 622
            GL
Sbjct: 730 KGL 732



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 50/307 (16%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           +++S++I  YA AG      I+++++   + + N           RD GE      +L +
Sbjct: 86  NSFSIIIHTYALAGMSWEVFILIRDIVTFYKEEN-----------RDAGE---LVSLLLD 131

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           ++ S V      ++++I  F   + L HA   F R   +GIE + ++ N L+ C  +  R
Sbjct: 132 VEKSNV-----VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNR 186

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE-DVKR---LLGNMRAQGLLPNVV 546
            D    LFE + + G  P   TY IM+N          D++R   +LG +   G  PNVV
Sbjct: 187 VDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVV 246

Query: 547 TYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVM 582
           TY T +    + G F  A                          C  G+ D+A   F+ M
Sbjct: 247 TYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEM 306

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RV 639
           +  G+ P   + + LI+ F    R  +A  V + M+ +G+ P++ +Y+ L+       RV
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366

Query: 640 DKFHKVF 646
           DK  +VF
Sbjct: 367 DKALEVF 373


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 239/521 (45%), Gaps = 38/521 (7%)

Query: 126 APL----WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYS---YELLYSILIHALGRSEK 178
           APL    W + L  LC S   I+ A+     +Q+ +L  S   Y++L  +LI + GR +K
Sbjct: 301 APLNNVAWTAFLSGLCKSGK-IEQAFEACRTMQE-SLSSSQPVYDMLIRLLIES-GRIDK 357

Query: 179 LYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
             EA L    + + P   T +++I    +   ++ AL+L+  M + GY  D   +S++I 
Sbjct: 358 AEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLIN 417

Query: 237 SLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQG 293
            L + +KI  +   LQ + ++I            N ++    KA    +A   F  M   
Sbjct: 418 ELCKADKIQEAQEFLQGMDRKIS--SRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE 475

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
               P   +Y+ +I           AE +++++ +    P    YNA L G ++ G + D
Sbjct: 476 RSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIAD 535

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A+ V  EM  +G  PD  TYS LI  ++ A + + A  + + M     +PN+  Y+ +L 
Sbjct: 536 AQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLH 595

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G     +     ++ ++M   G +PD   Y  ++  F     +  A+  FD M+S+G +P
Sbjct: 596 GLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 655

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D + +N L+   F+ G+   A++LF+ M  R   P T ++NIMI+ L + +R +D   + 
Sbjct: 656 DVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVF 715

Query: 534 GNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
             M +  G  P++VTY +L  I+G  G         E    +A+  F+ +    L P   
Sbjct: 716 ERMEQDHGCSPDLVTYNSL--IFGLCG---------EQRLSEAMKVFKEIDRLKLSPDPH 764

Query: 593 ALNSLINA--------FGEDQRDAEAFAVL-QYMKENGLKP 624
           A N L+ A        F    +D  AF VL + M   G KP
Sbjct: 765 AFNVLLEAIKCGIVYQFEIRFKDPPAFNVLMEAMHAAGHKP 805



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 140/570 (24%), Positives = 238/570 (41%), Gaps = 57/570 (10%)

Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAY----AVVSWLQKHNLCYSYELL 165
            +RV  +  E   AV   L  +LL N    + +I+ +      V S  +     YSY +L
Sbjct: 218 FSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVL 277

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
               +  L  + KL+    +  +  L  + + A +S   ++  +E+A      M Q+   
Sbjct: 278 AHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLS 336

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
                Y ++I+ L  + +ID +  ++   EI    I+      + VI    KAG    A+
Sbjct: 337 SSQPVYDMLIRLLIESGRIDKA--EEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSAL 394

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL--KESGLKPRTKAYNALLK 343
             L      G  P  AT++ +I  L  + +  EA+   + +  K S       +YN+LL 
Sbjct: 395 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLN 454

Query: 344 GYVKMGYLKDAEFVVSEM--ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
              K   +  A  + S M  ERS V PD  +YS+LID +        A  + K+M   + 
Sbjct: 455 SLCKAKKVHQAFAIFSTMVSERSFV-PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 513

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG---------- 451
            PN   Y+  L G   +G       V +EM ++G  PD   Y+ +I  F           
Sbjct: 514 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHE 573

Query: 452 ---------------KYNCLHHAMAA----------FDRMLSEGIEPDTITWNTLIDCHF 486
                           YNCL H +            F +M+  G +PD +T+ TL+    
Sbjct: 574 LFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFC 633

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+ ++A E+F+EM  +G+ P    YN ++       +  + K+L   M ++   P+ V
Sbjct: 634 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTV 693

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           ++  ++D   ++ R DDA+E  E          R+ +  G  P  +  NSLI     +QR
Sbjct: 694 SHNIMIDGLSKAKRLDDAVEVFE----------RMEQDHGCSPDLVTYNSLIFGLCGEQR 743

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +EA  V + +    L PD   +  L++A+
Sbjct: 744 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 227/542 (41%), Gaps = 59/542 (10%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARN 206
           WLQ  N  +     Y+ L+  L R   L +A  + ++   Q + P   TY  L+ +    
Sbjct: 119 WLQARNFKHDV-FTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYE 177

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
            + ++A+    +M   G+      Y  V + L  T K +    +   +++E  ++ ++  
Sbjct: 178 RNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK-EGEFSRVFGRDLE-KRVAVEMM 235

Query: 267 LLNDVIVGFA---KAGDASKAMR---------------------------------FLGM 290
           L   ++V F    KA +ASK  R                                 FL M
Sbjct: 236 LKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEM 295

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           A           + A ++ L  SG+  +A      ++ES L      Y+ L++  ++ G 
Sbjct: 296 AVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGR 354

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +  AE    E+    + P   T   +I     AGR +SA  +L+ M      P+   +S 
Sbjct: 355 IDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSM 414

Query: 411 ILAGYRDRGEWQRTFQVLKEM--KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           ++       + Q   + L+ M  K S        YN ++++  K   +H A A F  M+S
Sbjct: 415 LINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 474

Query: 469 E-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           E    PD ++++ LID   K     RAE+L+++M +    P  TTYN  +N L  + R  
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           D + +   M A G  P+V+TY+TL  I+G S         L    DQA   F  M + G 
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTL--IHGFS---------LARKHDQAHELFETMISRGC 583

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +P+ +  N L++   ++ +  EA  + + M E G  PD VTYTTL+     V K  +   
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643

Query: 648 SY 649
            +
Sbjct: 644 VF 645



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/499 (22%), Positives = 195/499 (39%), Gaps = 91/499 (18%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+    R+ DL++A  +  KM   G   +   Y++++QS               Y
Sbjct: 130 FTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQS-------------SCY 176

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +                         ++ +A+RF G     G  P +  Y  V   L  +
Sbjct: 177 ER------------------------NSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKAT 212

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  E   VF    E  +        ALL  +V      +A  +   M +SG  PD   Y
Sbjct: 213 GKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIY 272

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKP-NSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           S ++ A+      + A  +  EM V    P N+  ++  L+G    G+ ++ F+  + M+
Sbjct: 273 SYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ 332

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            S +      Y+++I    +   +  A  A   +    I+P + T +++I    K GR D
Sbjct: 333 ES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVD 391

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM---------------- 536
            A  L E M +RGY P   T++++IN L + ++ ++ +  L  M                
Sbjct: 392 SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNS 451

Query: 537 ----------------------RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
                                   +  +P+VV+Y+ L+D + +      A    E L  Q
Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRA----EKLYKQ 507

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            ++   V       P+    N+ +N      R A+A  V + M   G  PDV+TY+TL+ 
Sbjct: 508 MIDLNCV-------PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIH 560

Query: 635 ALI---RVDKFHKVFSSYL 650
                 + D+ H++F + +
Sbjct: 561 GFSLARKHDQAHELFETMI 579



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 17/240 (7%)

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++   RD GE    F+ L+   +   + D   YN ++D   ++  L  A   F++M+++G
Sbjct: 103 VIKHLRDGGEALTFFRWLQ---ARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG 159

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P+  T+  L+         D A   F EM ++G+ P +T Y  +   L    +  +  
Sbjct: 160 VVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFS 219

Query: 531 RLLG-NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           R+ G ++  +  +  ++    LV+   Q    D AIE        A   FR M   G KP
Sbjct: 220 RVFGRDLEKRVAVEMMLKKALLVNFVIQ----DKAIE--------ASKLFRAMVKSGCKP 267

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP-DVVTYTTLMKALIRVDKFHKVFSS 648
                + ++ A  + +   EAF +   M      P + V +T  +  L +  K  + F +
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 235/516 (45%), Gaps = 31/516 (6%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQR 188
           ++K LC  N  +D A A++  + +H  C    ++Y  LIHAL   GR  ++ +       
Sbjct: 241 VMKALCLVNE-VDSACALLKDMTRHG-CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLL 298

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
               P   T+N  I    +   + +A  L+ +M   G+  +   Y +++  L R  K+D 
Sbjct: 299 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 358

Query: 247 S--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAG--DASKAMRFLGMAQGVGLSPKTAT 302
           +  LL K+           +  L N +I G+   G  D +KA+    M   VG  P   T
Sbjct: 359 ARMLLNKVPNP--------NVVLFNTLINGYVSRGRLDEAKAVMHESMLS-VGCGPDIFT 409

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L   G  + A  +  E++  G +P    Y  L+  + K G L++A  V+ EM 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+  +   Y+ LI A     + + A  +  +M     KP+ F ++ ++ G     +++
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               + ++M   GV  +T  YN +I  F +   +  A+   + ML  G   D IT+N LI
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               + G  ++   LFE+M  +G  P   + NI+IN L      +     L +M  +GL 
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 649

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++VTY +L++   ++GR           + +A+N F  ++ +G+ P  +  N+LI+   
Sbjct: 650 PDIVTYNSLINGLCKTGR-----------AQEALNLFDKLQVEGICPDAITYNTLISWHC 698

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++    +A  +L    ++G  P+ VT+  L+   I+
Sbjct: 699 KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIK 734



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 213/468 (45%), Gaps = 20/468 (4%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +LS+    T  T+  ++ A    ++++ A  L+  M + G   + I Y  +I +L++  +
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285

Query: 244 IDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++    L +    + C     D    ND I G  K     +A + +      G +P + T
Sbjct: 286 VNEVLKLLEEMLLMGCIP---DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFT 342

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE-M 361
           Y  ++  L   G+  EA  +  ++      P    +N L+ GYV  G L +A+ V+ E M
Sbjct: 343 YGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESM 398

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G  PD  TY+ LI      G   SAR ++ EM++   +PN   Y+ ++  +   G  
Sbjct: 399 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 458

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    VL EM   G+  +   YN +I    K   +  A+  F  M S+G +PD  T+N+L
Sbjct: 459 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 518

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    K  +++ A  L+++M   G    T TYN +I+    +   ++  +L+ +M  +G 
Sbjct: 519 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 578

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             + +TY  L+    ++G  +      +GL+      F  M + GL P+N++ N LIN  
Sbjct: 579 PLDDITYNGLIKALCRAGNIE------KGLA-----LFEDMMSKGLNPNNISCNILINGL 627

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                   A   L+ M   GL PD+VTY +L+  L +  +  +  + +
Sbjct: 628 CRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 675



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 186/396 (46%), Gaps = 4/396 (1%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK-MRQDG 223
           Y +L+H L R  K+ EA  LL++      + +N LI+       L++A  +M + M   G
Sbjct: 343 YGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVG 402

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D   Y+ +I  L +   + S+  ++L  E++    E +      +I  F K G   +
Sbjct: 403 CGPDIFTYNTLILGLCKKGYLVSA--RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEE 460

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A   L    G GL+     Y  +I+AL    +  +A  +F ++   G KP    +N+L+ 
Sbjct: 461 ARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIF 520

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K+   ++A  +  +M   GV+ +  TY+ LI A+   G  + A  ++ +M       
Sbjct: 521 GLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL 580

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ ++      G  ++   + ++M S G+ P+    N++I+   +   + HA+   
Sbjct: 581 DDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFL 640

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+  G+ PD +T+N+LI+   K GR   A  LF+++Q  G  P   TYN +I+   ++
Sbjct: 641 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 700

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             ++D   LL      G +PN VT+  LV  + + G
Sbjct: 701 GMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 207/478 (43%), Gaps = 23/478 (4%)

Query: 177 EKLYEAFLLSQ-RQRLTPLTYNALISACARNDDLEKALNLMS-KMRQDGYHCDFINYSLV 234
           E+L + F L + R  LT +T   L        D+  ++ L      Q GY   F  Y ++
Sbjct: 76  ERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYML 135

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  L    +  ++    L  +++ + I     L   ++  + +AG   +A R L   +GV
Sbjct: 136 IDKLGAAGEFKTT--DALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGV 193

Query: 295 -GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
               P   +Y  V+  L           VF E+   G+ P    +  ++K    +  +  
Sbjct: 194 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 253

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ +M R G +P+   Y  LI A +  GR      +L+EM +    P+   ++  + 
Sbjct: 254 ACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 313

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-E 472
           G           +++  M   G  P++  Y V++    +   +  A     RML   +  
Sbjct: 314 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA-----RMLLNKVPN 368

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           P+ + +NTLI+ +   GR D A+ +  E M   G  P   TYN +I  L ++      + 
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARE 428

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L+  M+ +G  PNV+TYT L+D      RF     C EG  ++A N    M   GL  + 
Sbjct: 429 LMNEMQIKGCEPNVITYTILID------RF-----CKEGRLEEARNVLDEMSGKGLALNA 477

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  N LI+A  +D++  +A  +   M   G KPD+ T+ +L+  L +V+KF +    Y
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLY 535



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 7/227 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L +  K  EA  L Q   L       +TYN LI A  R   +++AL L++ M 
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I++L R   I+  L   L++++    +  +    N +I G  + G+
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGL--ALFEDMMSKGLNPNNISCNILINGLCRTGN 632

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+ FL      GL+P   TY ++I  L  +GR  EA  +F++L+  G+ P    YN 
Sbjct: 633 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 692

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           L+  + K G   DA  ++S    SG +P+E T+ +L+  +   G  E
Sbjct: 693 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 7/260 (2%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI AL + EK+ +A      + S+  +    T+N+LI    + +  E+AL L   M 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + I Y+ +I +  R   +  +L  KL  ++      LD    N +I    +AG+
Sbjct: 540 LEGVIANTITYNTLIHAFLRRGAMQEAL--KLVNDMLFRGCPLDDITYNGLIKALCRAGN 597

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             K +         GL+P   +   +I  L  +G    A     ++   GL P    YN+
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G  ++A  +  +++  G+ PD  TY+ LI  +   G ++ A ++L     S 
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717

Query: 401 AKPNSFIYSRILAGYRDRGE 420
             PN   +  +++ +   G+
Sbjct: 718 FIPNEVTWYILVSNFIKEGD 737


>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
           sulphuraria]
          Length = 821

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 200/424 (47%), Gaps = 20/424 (4%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           N++  + +L +  K    L   ++  +  ++++ D    +  I    +    S+A R L 
Sbjct: 279 NWNYTMDALLKGGKARECL--DMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLI 336

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKM 348
             +   + P   TY+A+I  L   G  + A + F  +     + P T  YNA++K   + 
Sbjct: 337 WMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRC 396

Query: 349 -----GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
                G +  A  ++ EM   G +PD  TY+ LIDA++     E A  + +EM+ ++ KP
Sbjct: 397 KRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKP 456

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N++ YS +++ +   G  +R   + +EM    + PD   +N +ID FGK   +  A   +
Sbjct: 457 NNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIY 516

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMINLLGE 522
           DRM    I+PD IT+N LI    K     RA E   +M E  G  P   +YN +I+  G+
Sbjct: 517 DRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGK 576

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
              +     +   MR +G+ P  VT+  L  IYG S   D A          +     +M
Sbjct: 577 SGDFTKAYEVFEEMRTKGIRPCTVTFNAL--IYGASRSHDLA---------ASFKIVDLM 625

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +GL P    +N+LI+A    Q  + AF VL+  K+ G+ PD VT+ T + A+ ++D  
Sbjct: 626 LQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSS 685

Query: 643 HKVF 646
            K+F
Sbjct: 686 EKMF 689



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 199/417 (47%), Gaps = 24/417 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLT--------PLTYNALI---SACARND--DLEKA 212
           YS LI  LG+      A  LSQ +R++         +TYNA+I   S C RND   + +A
Sbjct: 350 YSALIETLGKGGLCVRA--LSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRA 407

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
           ++L+ +M   G   D + Y+ +I + ++  + + +L  KL++E++   ++ +    + +I
Sbjct: 408 MSLLREMATKGCIPDVVTYATLIDAFSKRMEPERAL--KLFQEMKEANVKPNNYCYSSLI 465

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
             F +AG   +A+          + P    + A+I       +  +A  +++ +++  ++
Sbjct: 466 SAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQ 525

Query: 333 PRTKAYNALLKGYVKM-GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           P    +NAL+    K    ++  E +    E  G+ PD H+Y+ LIDA   +G +  A  
Sbjct: 526 PDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYE 585

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           V +EM     +P +  ++ ++ G     +   +F+++  M   G+ PD +  N +I    
Sbjct: 586 VFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNPDAYTMNTLISACN 645

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE---EMQERGYFP 508
           +   L  A    ++    G+ PD +T+NT ID     G+ D +E++FE   EM+ RG  P
Sbjct: 646 RRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDA---VGKLDSSEKMFELLSEMESRGISP 702

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
              T N ++   G + + + ++R       + L P+ VT++ L++ Y      D A+
Sbjct: 703 SKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAV 759



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 154/382 (40%), Gaps = 37/382 (9%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +T  +   + AL   G+  E   +F  +  + +K    +++  +    ++    +AE  +
Sbjct: 276 QTRNWNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSL 335

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRIL----- 412
             M    + P+ +TYS LI+     G    A    + M  + +  PN+  Y+ ++     
Sbjct: 336 IWMREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSR 395

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
               D G   R   +L+EM + G  PD   Y  +ID F K      A+  F  M    ++
Sbjct: 396 CKRNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVK 455

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+   +++LI    + G  +RA  +FEEM      P    +N +I+  G+  + +    +
Sbjct: 456 PNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEI 515

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------- 573
              MR   + P+ +T+  L+     SG+  ++I  LE + D                   
Sbjct: 516 YDRMRKLQIQPDRITFNALI---SASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALID 572

Query: 574 ---------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    +A   F  MRT G++P  +  N+LI         A +F ++  M + GL P
Sbjct: 573 ACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASFKIVDLMLQEGLNP 632

Query: 625 DVVTYTTLMKALIRVDKFHKVF 646
           D  T  TL+ A  R       F
Sbjct: 633 DAYTMNTLISACNRRQDLSTAF 654



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 17/237 (7%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+ +    +   M S+ V+ D   +++ I   G+      A  +   M  E I+P+  T+
Sbjct: 291 GKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWMREEHIQPNIYTY 350

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMINLLGEQERWE--DVKR---L 532
           + LI+   K G   RA   F  M       P T TYN +I ++   +R +   + R   L
Sbjct: 351 SALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRNDCGGITRAMSL 410

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M  +G +P+VVTY TL+D +  S R +          ++A+  F+ M+   +KP+N 
Sbjct: 411 LREMATKGCIPDVVTYATLIDAF--SKRME---------PERALKLFQEMKEANVKPNNY 459

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +SLI+AF        A A+ + M    + PDV  +  L+    ++ +  K F  Y
Sbjct: 460 CYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIY 516



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 15/297 (5%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL----LSQRQRLTP--LTY 196
           +D A+ +   ++K  +     + ++ LI A G+++    A      +++   LTP   +Y
Sbjct: 509 VDKAFEIYDRMRKLQI-QPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSY 567

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           NALI AC ++ D  KA  +  +MR  G     + ++ +I   +R++ + +S   K+   +
Sbjct: 568 NALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASF--KIVDLM 625

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
             + +  D   +N +I    +  D S A   L   + +G+ P   T+   I A+   G+ 
Sbjct: 626 LQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAV---GKL 682

Query: 317 IEAEAVFE---ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
             +E +FE   E++  G+ P     N ++    + G +   E          + PD  T+
Sbjct: 683 DSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTF 742

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           SLLI+ Y +    + A I     +    + NS +   +L     + E +    +LK+
Sbjct: 743 SLLIENYVSHHLLDKAVIAYHNCKRQQLELNSNVVMHLLESLIRKDEIEVAKLILKD 799


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 213/482 (44%), Gaps = 51/482 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T++ LI A  +  +L+KA  L   M  +G   D I YS++I  L +  +++    Q+L 
Sbjct: 308 VTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDG--QRLL 365

Query: 254 KEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             +  DK I+LD    +  +  + K GD  + ++        G+SP   + + +I     
Sbjct: 366 L-VALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQ 424

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +GR +EA  +F ++ + G +P    Y+AL+ G+ K G L+D  ++  +M +    PD   
Sbjct: 425 NGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIV 484

Query: 373 YSLLIDAYANAGRWESA-----------------------------RIVLKEMEVSH--- 400
           YS+LI+     G    A                             + ++  M+V +   
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMG 544

Query: 401 ---AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               K ++  Y+ ++ G    G       +  +M     +PD   Y  +ID   K     
Sbjct: 545 MLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             +  FD M    + PD   +N LI+ H + G  + A  LF  + ERG  P   T+N MI
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                 +R +D  +L   M ++ L PN +T+T L+D + + GR DDA+            
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML----------- 713

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA-FAVLQYMKENGLKPDVVTYTTLMKAL 636
            F  M  +G +P+ +  + LI+ + + Q   E+   +   M EN + P++V+Y+ L+  L
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 637 IR 638
            +
Sbjct: 774 CK 775



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 13/368 (3%)

Query: 275 FAKAGDASKAMRF-LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           F   G+    +RF   + QG G      T   ++  +        A+  F  +   G KP
Sbjct: 247 FMNKGEVEMGLRFHKALVQG-GFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKP 305

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               ++ L+  Y K G L  A  +   M  +GV PD   YS+LID    AGR E  + +L
Sbjct: 306 NVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLL 365

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
                   K +   +S  +  Y   G+  R  Q+ K M + G+ P+    +++I  F + 
Sbjct: 366 LVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQN 425

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A   F ++L  G EP  +T++ LI    K G       L+E+M ++   P T  Y
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           +++IN L +Q    D  R       +GL PNV T  TL+D + +       ++C+ G   
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCR-------LKCIVG--- 535

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A+  + +M    +K   +    LI    +  R  EA  +   M +   KPDV+TY TL+
Sbjct: 536 -AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLI 594

Query: 634 KALIRVDK 641
             L ++ K
Sbjct: 595 DGLCKLKK 602



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/431 (23%), Positives = 179/431 (41%), Gaps = 29/431 (6%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           ++K   L S MR+      F  Y  V+       +++  L  + +K +      LD    
Sbjct: 222 VDKYGELCSAMREQ----PFSVYEFVMNRFMNKGEVEMGL--RFHKALVQGGFGLDIITC 275

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G     D   A  +  M   +G  P   T++ +I A    G   +A  +F+ +  
Sbjct: 276 NKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAG 335

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G+ P    Y+ L+ G  K G L+D + ++      G+  D   +S  +DAY   G    
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              + K M      PN    S ++ G+   G       +  ++   G EP    Y+ +I 
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIA 455

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            F K   L      ++ M+ +  EPDTI ++ LI+   K G    A   F +   RG  P
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRA---QGLL---PNVVTYTTLVDIYGQSGRFD 562
              T N ++      + +  +K ++G M+     G+L    + VTYT L+    Q GR D
Sbjct: 516 NVFTLNTLL------DSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVD 569

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A+             F++++ D  KP  +   +LI+   + ++ +    +  +M +N +
Sbjct: 570 EALMLF----------FQMLKKD-FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAV 618

Query: 623 KPDVVTYTTLM 633
            PD+  Y  L+
Sbjct: 619 APDIAIYNVLI 629



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 16/382 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLL 185
           + +L+   C S +  D  Y     ++K   C    ++YS+LI+ L +   + +A   F  
Sbjct: 450 YSALIAGFCKSGNLRDGFYLYEDMIKKR--CEPDTIVYSVLINGLCKQGLVGDALRFFFQ 507

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +  + L+P   T N L+ +  R   +  A+ +   M       D + Y+++I+   +  +
Sbjct: 508 AVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567

Query: 244 IDSSLL---QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           +D +L+   Q L K+ + D I         +I G  K   +S  +          ++P  
Sbjct: 568 VDEALMLFFQMLKKDFKPDVITY-----CTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDI 622

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           A Y  +I   S  G    A  +F  + E G KP    +N ++  Y     L DA  + ++
Sbjct: 623 AIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAK 682

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRG 419
           M    + P+  T+++LIDA+   GR + A ++  +M     +PN   YS ++ GY + + 
Sbjct: 683 MTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQS 742

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +   ++  EM  + + P+   Y+++ID   K   +  A  AF   L + + PD I + 
Sbjct: 743 MMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYT 802

Query: 480 TLIDCHFKCGRYDRAEELFEEM 501
            LI  + K GR   A  L++ M
Sbjct: 803 ILIRGYCKVGRLTEAMMLYDNM 824



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 167/419 (39%), Gaps = 43/419 (10%)

Query: 167 SILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQ 221
           SILI    ++ ++ EA  L  Q  +L    + LTY+ALI+   ++ +L     L   M +
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
                D I YS++I  L +   +  +L  + + +     +  +   LN ++  F +    
Sbjct: 476 KRCEPDTIVYSVLINGLCKQGLVGDAL--RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             AM+   +   + +   T TY  +I   +  GR  EA  +F ++ +   KP    Y  L
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K+        +   M ++ V PD   Y++LI+ ++  G  E+A  +   +     
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+ F ++ ++  Y +        Q+  +M S  + P+   + ++ID F +   +  AM 
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML 713

Query: 462 AFDRMLSEGIEPDTITW------------------------------------NTLIDCH 485
            F +ML EG EP+ +T+                                    + LID  
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            K G    A   F    ++   P    Y I+I    +  R  +   L  NM    L P+
Sbjct: 774 CKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 8/280 (2%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI      GR ++    F    ++   P  +TY  LI    +       L +   M 
Sbjct: 555 YTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMC 614

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++    D   Y+++I   +R   ++++L   L+  +     + D    N +I  +     
Sbjct: 615 KNAVAPDIAIYNVLINMHSREGHLEAAL--GLFVHVVERGPKPDVFTFNTMICCYCNFKR 672

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++         L P   T+  +I A    GR  +A  +F ++ E G +P    Y+ 
Sbjct: 673 LDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSC 732

Query: 341 LLKGYVKMGYLKDAEF-VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           L+ GY K   + ++   + +EM  + + P+  +YS+LID     G  + A    +     
Sbjct: 733 LIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDK 792

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           H  P+   Y+ ++ GY   G       +   M  + + PD
Sbjct: 793 HLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 36/185 (19%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S++ R   +T+  LI A  R   ++ A+ + SKM ++G   + + YS +I    ++  + 
Sbjct: 685 SEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMM 744

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            S L KLY E+          L N++                         +P   +Y+ 
Sbjct: 745 ESGL-KLYNEM----------LENNI-------------------------APNIVSYSI 768

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L   G   EA   F    +  L P   AY  L++GY K+G L +A  +   M  + 
Sbjct: 769 LIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNR 828

Query: 366 VLPDE 370
           + PD 
Sbjct: 829 LTPDR 833



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/246 (18%), Positives = 101/246 (41%), Gaps = 11/246 (4%)

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +S +Y  ++  Y  +G + ++  +   +   G+    +   +++ +    +C+   +  +
Sbjct: 166 HSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKY 225

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             + S   E     +  +++     G  +      + + + G+     T N ++  +  Q
Sbjct: 226 GELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQ 285

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
                       +   G  PNVVT++TL+D Y           C EG  D+A   F VM 
Sbjct: 286 NDIGVADDYFNMVVRIGPKPNVVTFSTLIDAY-----------CKEGNLDKAFVLFDVMA 334

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
            +G+ P  +  + LI+   +  R  +   +L    + G+K DVV +++ M A +++    
Sbjct: 335 GNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLG 394

Query: 644 KVFSSY 649
           +V   Y
Sbjct: 395 RVIQIY 400


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 154/621 (24%), Positives = 266/621 (42%), Gaps = 99/621 (15%)

Query: 104 ASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE 163
           A+SP+   R+   L+ S  ++P P   S L  L +++ +   A A++  L +H L +   
Sbjct: 18  AASPAVALRLFLHLS-SAASLPPPRCTSFLARLVAAHPA---AGALLPRLHRHILSFPDP 73

Query: 164 LLYSILIHALGRSEKL-----YEAF-----LLSQRQRLTPLTYNALISACARNDDLEKAL 213
             +  L+  L  S+ L       AF     L S     TP+ YN LI    R   L+   
Sbjct: 74  CPH--LLALLSCSDILPLRLAIPAFRSLRALASAPPPPTPV-YNRLILTALRESRLDLVE 130

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY-------------------- 253
            L   +   G   D    +L++++L    +++  L Q+++                    
Sbjct: 131 ALYKDLLLAGAQPDVFTRNLLLRALCDAGRME--LAQRVFEAMPVRNEFSFGILARGYCR 188

Query: 254 --KEIECDKIELDGQ------LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
             + ++  K+ LDG       + N V+ GF K G   +A R +   +  GL+P   T+ +
Sbjct: 189 AGRSVDALKV-LDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNS 247

Query: 306 VITALSNSGRTIEAEAVFEELKES---GL-KPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            I+AL  +GR ++A  +F++++E    GL +P    ++ +L G+   G++ +A  +V  M
Sbjct: 248 RISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM 307

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G L    +Y+  +      GR   A  +L+EM      PNS+ Y+ I++G    G+ 
Sbjct: 308 RCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKA 367

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +V   ++S  + PD   Y  ++  +     +  A    D M  +G  P++ T+N L
Sbjct: 368 FDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVL 427

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-----------WEDVK 530
           +   ++ GR   AE L E M E+GY   T   NI+I+ L    +           WE+  
Sbjct: 428 LQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGS 487

Query: 531 RLLGNMR------------AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
             LG +             +Q  LP+ +TY+ L+    + GRFD+A +            
Sbjct: 488 TALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISP 547

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  G +  A+   R M   G  PS    N LI  F E  +  E   ++
Sbjct: 548 DSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLM 607

Query: 615 QYMKENGLKPDVVTYTTLMKA 635
             M+E G+ P+V+TY +L+K+
Sbjct: 608 SEMEEKGVSPNVLTYNSLIKS 628



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 73/492 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           LL+ LC +   ++LA  V   +   N     E  + IL     R+ +  +A  +L     
Sbjct: 151 LLRALCDAGR-MELAQRVFEAMPVRN-----EFSFGILARGYCRAGRSVDALKVLDGMPS 204

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           +  +  N +++   +   +E+A  L+ +MR  G   + + ++  I +L +  ++  +   
Sbjct: 205 MNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDA--Y 262

Query: 251 KLYKEIECD---KIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +++K+++ D    +    Q+  DV++ GF  AG   +A   + + +  G   +  +Y   
Sbjct: 263 RIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRW 322

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           ++ L  +GR  EA  +  E+    + P +  YN ++ G  K G   DA  V     RSGV
Sbjct: 323 LSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGV 381

Query: 367 L-PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD  TY+ L+ AY + G   +A  +L EM      PNSF Y+ +L      G      
Sbjct: 382 MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAE 441

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM------------------- 466
           ++L+ M   G   DT   N++ID   + + L  AM   D M                   
Sbjct: 442 RLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVV 501

Query: 467 ----LSEGIEPDTITWNTLIDCHFKCGRYDRAEE-------------------------- 496
               +S+   PD IT++ LI    K GR+D A++                          
Sbjct: 502 SDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCK 561

Query: 497 ---------LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
                    +  +M+++G  P T TYN++I    E+ + +++ +L+  M  +G+ PNV+T
Sbjct: 562 HGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLT 621

Query: 548 YTTLVDIYGQSG 559
           Y +L+  + Q G
Sbjct: 622 YNSLIKSFCQQG 633



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 34/396 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQ---KHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++S +  LC +   +D AY +   +Q   +H L    ++ + +++     +  + EA +L
Sbjct: 245 FNSRISALCKAGRVLD-AYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL 303

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
               R         +YN  +S   RN  + +A  L+ +M  +  H +   Y++++  L +
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCK 363

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             K   +  +++   I    +  D      ++  +   G+ + A R L      G +P +
Sbjct: 364 EGKAFDA--RRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNS 421

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  ++ +L  +GRT EAE + E + E G    T   N ++ G  +   L  A  +V  
Sbjct: 422 FTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDG 481

Query: 361 MERSG-----------------------VLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           M   G                        LPD  TYS+LI A    GR++ A+  L EM 
Sbjct: 482 MWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMI 541

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V    P+S IY   + GY   G+     +VL++M+  G  P T  YN++I  F + +   
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSD 601

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             M     M  +G+ P+ +T+N+LI    + G   R
Sbjct: 602 EIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 102/273 (37%), Gaps = 56/273 (20%)

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F+ L+ + +S   P T  YN +I T  + + L    A +  +L  G +PD  T N L+ 
Sbjct: 95  AFRSLRAL-ASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLR 153

Query: 484 CHFKCGRYDRAEELFEEMQERGYFP--------CT-------------------TTYNIM 516
                GR + A+ +FE M  R  F         C                       N +
Sbjct: 154 ALCDAGRMELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTV 213

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------- 566
           +    ++   E+ +RL+  MR QGL PNVVT+ + +    ++GR  DA            
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQ 273

Query: 567 ------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                             C  G  D+A     +MR  G      + N  ++    + R  
Sbjct: 274 HGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVG 333

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           EA  +L+ M    + P+  TY  ++  L +  K
Sbjct: 334 EAHELLREMAHERIHPNSYTYNIIVSGLCKEGK 366



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 26/200 (13%)

Query: 456 LHHAMAAFD--RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           L  A+ AF   R L+    P T  +N LI    +  R D  E L++++   G  P   T 
Sbjct: 89  LRLAIPAFRSLRALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTR 148

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N+++  L +  R E  +R+   M  +    N  ++  L   Y ++GR  DA++ L     
Sbjct: 149 NLLLRALCDAGRMELAQRVFEAMPVR----NEFSFGILARGYCRAGRSVDALKVL----- 199

Query: 574 QAVNAFRVMRTDGLKPSNLAL-NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                      DG+   NL + N+++  F ++    EA  +++ M+  GL P+VVT+ + 
Sbjct: 200 -----------DGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSR 248

Query: 633 MKALIRVDKFHKVFSSYLFF 652
           + AL    K  +V  +Y  F
Sbjct: 249 ISALC---KAGRVLDAYRIF 265


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 218/479 (45%), Gaps = 19/479 (3%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI     + R E     F    R  L P   +YN LI   ++  +++KA  L  KM 
Sbjct: 125 YNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMI 184

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     D + Y+ +I  L +T ++  S  +++ +++    I  + +  N +I G++ AG 
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKS--ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 242

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +++R        GL P      + I AL    R  EA+ +F+ +   G KP   +Y+ 
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYST 302

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL GY   G   +   +V+ M   G++P+   +++LI+AYA  G  + A ++ ++M+   
Sbjct: 303 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 362

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P++  ++ +++     G           M   GV P    Y  +I     +  L  A 
Sbjct: 363 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAK 422

Query: 461 AAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                M+++ I P  + + +++I+  FK GR    +++ + M + G  P   T+N ++  
Sbjct: 423 ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEG 482

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                  E+   LL  M + G+ PN   Y TLVD Y ++GR DDA+             F
Sbjct: 483 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL-----------TVF 531

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           R M   G+KP+++  N +++   + +R   A  +   M E+G    + TY  ++  L R
Sbjct: 532 RDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCR 590



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 189/412 (45%), Gaps = 32/412 (7%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I GF+K G+  KA           +SP   TY ++I  L  +   +++E V E++ +
Sbjct: 161 NTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVD 220

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G++P  K YN+L+ GY   G  K++  V  EM  SG++P     +  I A     R + 
Sbjct: 221 AGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKE 280

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A+ +   M +   KPN   YS +L GY   G +     ++  M S G+ P+  F+N++I+
Sbjct: 281 AKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILIN 340

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR D A   F  M + G  P
Sbjct: 341 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 400

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT-----------------L 551
               Y  +I            K L+  M  + + P  V Y +                 +
Sbjct: 401 SEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDI 460

Query: 552 VDIYGQSGR------FDDAIE--CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +D+  Q+G+      F+  +E  CL G  ++A      M + G++P+     +L++ + +
Sbjct: 461 MDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 520

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSS 648
           + R  +A  V + M   G+KP  V Y  ++  L +  +       FH++  S
Sbjct: 521 NGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES 572



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 25/376 (6%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   TY  +I       R   A AVF  L  +GL P   +YN L+ G+ K G +  A  
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYE 178

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  +M    V PD  TY+ LID          +  VL++M  +  +PN+  Y+ ++ GY 
Sbjct: 179 LFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYS 238

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G W+ + +V KEM SSG+ P     N  I    ++N +  A   FD M+ +G +P+ I
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           +++TL+  +   G +     L   M  +G  P    +NI+IN        +    +  +M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----NAFR------------ 580
           + +G++P+ VT+ T++    + GR DDA+     + D  V      +R            
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 581 ---------VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                    +M  D   P     +S+IN   ++ R AE   ++  M + G +P+VVT+ +
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 632 LMKALIRVDKFHKVFS 647
           LM+    V    + F+
Sbjct: 479 LMEGYCLVGNMEEAFA 494



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 242/543 (44%), Gaps = 24/543 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSID----LAYAVVSWLQKHNLCYSYELLYSILI 170
           +K+ E   +     ++SL+  LC +   +     L   V + ++ +N  Y+  L+Y    
Sbjct: 181 YKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYN-SLIYGY-- 237

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
              G  ++    F       L P  +  N+ I A  R++ +++A ++   M   G   + 
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           I+YS ++          +  +  L   +    I  + +  N +I  +A+ G   KAM   
Sbjct: 298 ISYSTLLHGYAAEGCFAN--MNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
              Q  G+ P T T+A VI++L   GR  +A   F  + + G+ P    Y  L++G    
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNH 415

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           G L  A+ ++SEM    + P    Y S +I+     GR    + ++  M  +  +PN   
Sbjct: 416 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 475

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           ++ ++ GY   G  +  F +L  M S G+EP+ + Y  ++D + K   +  A+  F  ML
Sbjct: 476 FNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML 535

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G++P ++ +N ++   F+  R   A+++F EM E G      TY +++  L      +
Sbjct: 536 HKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTD 595

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   LL  + A  +  +++T+  ++    + GR  +A E    +S           T GL
Sbjct: 596 EANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAIS-----------TYGL 644

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            P+    N +I+   +++   EA  +   ++++G  PD      +++ L++  +  K  S
Sbjct: 645 VPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA-S 703

Query: 648 SYL 650
           +YL
Sbjct: 704 NYL 706


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 232/514 (45%), Gaps = 31/514 (6%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISAC 203
           A+++ S   KH+  Y   LL S+L++      +  + F   + + + P +     L+   
Sbjct: 471 AFSLSSPSLKHDFSY---LLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHL 527

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +       +N+   + +  +      Y   IQ+  + + +   L  +L+  ++ D+I  
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL--ELFNRMKHDRISP 585

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
              + N +I G  K      A +         L P   TY  +I      G   ++  V 
Sbjct: 586 TVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVR 645

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E +K   ++P    +N LLKG  K G ++DAE V++EM+  G +PD  T+S+L D Y++ 
Sbjct: 646 ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            + ++A  V +    S  K N++  S +L      G+ ++  ++L    + G+ P+   Y
Sbjct: 706 DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLY 765

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N MID + +   L  A    D M  +G++PD + +N LI    + G  + AE+   +M+ 
Sbjct: 766 NTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL 825

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +G  P   TYNI+I   G +  ++    LL  M   G +PNVV+Y TL++   +  +  +
Sbjct: 826 KGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 564 AIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSLIN 599
           A      + D+ V                     +AFR    M   G++ + +  N+LI+
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               + + AEA  +L  +   GLKPDV TY +L+
Sbjct: 946 GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 122/521 (23%), Positives = 228/521 (43%), Gaps = 33/521 (6%)

Query: 155  KHNLCYSYELLYSILIHALGR------SEKLYEAFLLSQRQRLTP--LTYNALISACARN 206
            KH+       +Y++LI  L +      +E+L++  L    +RL P  +TYN LI    ++
Sbjct: 579  KHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML---ARRLLPSLITYNTLIDGYCKD 635

Query: 207  DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
             + EK+  +  +M+ D      I ++ +++ L +   ++ +  + +  E++      D  
Sbjct: 636  GNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDA--ENVLTEMKDQGFVPDAF 693

Query: 267  LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
              + +  G++    A  A+     A   GL     T + ++ AL   G+  +AE +    
Sbjct: 694  TFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGRE 753

Query: 327  KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
               GL P    YN ++ GY + G L  A   +  ME+ G+ PD   Y+ LI  +   G  
Sbjct: 754  MAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDM 813

Query: 387  ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
            E+A   + +M++    P+   Y+ ++ GY  + E+ + F +LKEM+ +G  P+   Y  +
Sbjct: 814  ENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTL 873

Query: 447  IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
            I+   K + L  A      M   G+ P+   +N LID     G+ + A    EEM ++G 
Sbjct: 874  INCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGI 933

Query: 507  FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                 TYN +I+ L    +  + + +L  +  +GL P+V TY +L+  Y  +G     I 
Sbjct: 934  ELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIA 993

Query: 567  CLEGLSDQAVNAF--------------------RVMRTDGLKPSNLALNSLINAFGEDQR 606
              E +    +                       ++     L+P  L  N +++ +     
Sbjct: 994  LYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGD 1053

Query: 607  DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
              +AF + + M E  +  D  TY +L+   ++V K  +V S
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 1094



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 233/513 (45%), Gaps = 41/513 (7%)

Query: 124  VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLY 180
            VP     S+L +  SSN   D A  V        L  +     SIL++AL   G+ EK  
Sbjct: 689  VPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMN-AYTCSILLNALCKEGQIEKAE 747

Query: 181  EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
            E       + L P  + YN +I   +R  DL  A   +  M + G   D + Y+ +I++ 
Sbjct: 748  EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807

Query: 239  TRTNKIDSSLLQKLYKEIECDKIELDG-----QLLNDVIVGFAKAGDASKAMRFLGMAQG 293
                 ++++       E E +K++L G     +  N +I G+ +  +  K    L   + 
Sbjct: 808  CELGDMENA-------EQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED 860

Query: 294  VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
             G  P   +Y  +I  L    + +EA+ V  ++++ G+ P  + YN L+ G    G ++D
Sbjct: 861  NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIED 920

Query: 354  AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            A     EM + G+  +  TY+ LID  +  G+   A  +L E+     KP+ F Y+ +++
Sbjct: 921  AFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLIS 980

Query: 414  GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIE 472
            GYR  G  QR   + +EMK+SG++P    Y+++I       C    +    ++  E  ++
Sbjct: 981  GYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISL-----CTKEGIELTKKIFGEMSLQ 1035

Query: 473  PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE--RWEDVK 530
            PD + +N ++ C+   G  D+A  L ++M E+      TTYN +I  LG+ +  +  +V+
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLI--LGQLKVGKLCEVR 1093

Query: 531  RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
             L+  M+A+ + P   TY  +V  + +   +             A   +R M+  GL   
Sbjct: 1094 SLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG-----------AYVWYREMQEKGLLLD 1142

Query: 591  NLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                + L++   E+ R  EA  V+  M  NG K
Sbjct: 1143 VCIGDELVSGLKEEWRSKEAENVISEM--NGRK 1173



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 162/347 (46%), Gaps = 6/347 (1%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            TYN LI    R  + +K  +L+ +M  +G   + ++Y  +I  L + +K+  +  Q + +
Sbjct: 834  TYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA--QIVKR 891

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++E   +  + ++ N +I G    G    A RF       G+     TY  +I  LS +G
Sbjct: 892  DMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG 951

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
            +  EAE +  E+   GLKP    YN+L+ GY   G ++    +  EM+ SG+ P   TY 
Sbjct: 952  KLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH 1011

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LLI      G  E  + +  EM +   +P+  +Y+ +L  Y   G+  + F + K+M   
Sbjct: 1012 LLISLCTKEG-IELTKKIFGEMSL---QPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEK 1067

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
             +  D   YN +I    K   L    +  D M +  +EP+  T++ ++  H +   Y  A
Sbjct: 1068 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGA 1127

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
               + EMQE+G        + +++ L E+ R ++ + ++  M  + L
Sbjct: 1128 YVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKL 1174



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 11/219 (5%)

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +++ G+ P +    +++D   K       +  F  +L     P    +   I    K   
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             +  ELF  M+     P    YN++I+ L +  + +D ++L   M A+ LLP+++TY T
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNT 627

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D Y           C +G  +++      M+ D ++PS +  N+L+    +     +A
Sbjct: 628 LIDGY-----------CKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDA 676

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             VL  MK+ G  PD  T++ L       DK       Y
Sbjct: 677 ENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVY 715


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/572 (24%), Positives = 241/572 (42%), Gaps = 108/572 (18%)

Query: 122 RAVPAPLWH--SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R VP   +    L+K  CS +    L +A+ ++ +   L +   ++ +S L+H L   ++
Sbjct: 107 RRVPCNAYSFTILMKCFCSCSK---LPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDR 163

Query: 179 LYEAF-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           + EA  L  Q  +   +T+  L++   R   + +A+ L+ +M +DG   + I Y  ++  
Sbjct: 164 ISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD- 222

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG-L 296
                                               G  K GD   A+  L   + V  +
Sbjct: 223 ------------------------------------GMCKMGDTVSALNLLRKMEEVSHI 246

Query: 297 SPKTATY-----AAVITALSNSGRTIEAEAVFEELKE-SGLKPRTKAYNALLKGYVKMGY 350
            P    +       +I    +SGR  EA+ + +E+ E   + P    YNAL+  +VK G 
Sbjct: 247 KPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGK 306

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
             +AE +  EM   G++P   TYS +ID +    R ++A  +   M      P+   ++ 
Sbjct: 307 FFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNT 366

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++AGY          ++L EM  +G+  +T  Y  +I  F +   L+ A      M+S G
Sbjct: 367 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSG 426

Query: 471 IEPDTITWNTLID--CH----------FKC------------------------------ 488
           + P+ +T NTL+D  C           FK                               
Sbjct: 427 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISG 486

Query: 489 ----GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
               G++  AEEL+EEM  RG  P T TYN +I+ L +Q R ++  ++  +M ++   PN
Sbjct: 487 LINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPN 546

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           VVT+TTL++ Y ++GR DD +E            F  M   G+  + +   +LI+ F + 
Sbjct: 547 VVTFTTLINGYCKAGRVDDGLE-----------LFCEMGRRGIVANAITYITLIHGFRKV 595

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                A  + Q M  +G+ PD +T   ++  L
Sbjct: 596 GNINGALDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 174/406 (42%), Gaps = 28/406 (6%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ----RQRLTP--LTYNALISA 202
           VV W  +   C         +I+    S +  EA  L Q    R++++P  +TYNALI+A
Sbjct: 250 VVIWPLERRTC---------MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
             +     +A  L  +M   G     I YS +I    + N++D++  + ++  +      
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA--EHMFYLMATKGCS 358

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D    N +I G+ +A      ++ L      GL   T TY  +I      G    A+ +
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 418

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-----------GVLPDEH 371
            +E+  SG+ P     N LL G    G LKDA  +   M++S           GV PD  
Sbjct: 419 LQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQ 478

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++LI    N G++  A  + +EM      P++  Y+ ++ G   +       Q+   M
Sbjct: 479 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S    P+   +  +I+ + K   +   +  F  M   GI  + IT+ TLI    K G  
Sbjct: 539 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNI 598

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + A ++F+EM   G +P T T   M+  L  +E  +    +L +++
Sbjct: 599 NGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/372 (20%), Positives = 151/372 (40%), Gaps = 84/372 (22%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ ++  L+DA  +  +M RS  LP    +  L+      GR +    + ++ME+  
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------------------------- 435
              N++ ++ ++  +    +         ++   G                         
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 436 ------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--C--- 484
                  +P+   +  +++   +   +  A+A  DRML +G++P+ IT+ T++D  C   
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228

Query: 485 ----------------HFK------------C--------GRYDRAEELFEEMQERGYF- 507
                           H K            C        GR+  A++L +EM ER    
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYN +IN   ++ ++ + + L   M  +G++P+ +TY++++D + +  R       
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL------ 342

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                D A + F +M T G  P  +  N+LI  +   +R  +   +L  M E GL  + +
Sbjct: 343 -----DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397

Query: 628 TYTTLMKALIRV 639
           TYTTL+    +V
Sbjct: 398 TYTTLIHGFCQV 409


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 204/450 (45%), Gaps = 23/450 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +++N +++A  +  ++  A      + + G+ CD   Y+ +I    + +++  +     Y
Sbjct: 191 ISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDA-----Y 245

Query: 254 KEIECDKIELDGQLLNDV-----IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           K  E   +  +G L N+V     I GF + G   +A+      +  G  P   TY  ++ 
Sbjct: 246 KVFEI--MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVA 303

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A    G+  EA   FEE+ E+G++P    Y  L+  + K+G + +   ++S M   G++ 
Sbjct: 304 AFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVS 363

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
               ++ LID Y   G  E A  VL  M+++   PNS  Y+ ++ G+  +    R   +L
Sbjct: 364 SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALL 423

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M  + + P+   YN +I    K   +  A      M+ +G  PD  T+   IDC  K 
Sbjct: 424 NKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKM 483

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+ ++A ++FE ++E+        Y  +I+   + E++ D   L   M  +G  PN +T+
Sbjct: 484 GKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITF 543

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L+D   + G+ +DA+  ++           VM     KP+      LI     +    
Sbjct: 544 NVLLDGLRKEGKVEDAMSLVD-----------VMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A   L  M  +G +P+VVTYT  +KA  R
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCR 622



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 227/538 (42%), Gaps = 24/538 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           + SL+   C  +   D AY V   + +   C   E+ Y+ LIH    +G+ ++  E F  
Sbjct: 228 YTSLILGYCKIHELGD-AYKVFEIMPQEG-CLRNEVSYTNLIHGFCEVGKIDEALELFFQ 285

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +     P   TY  L++A        +AL    +M ++G   +   Y+++I    +  K
Sbjct: 286 MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGK 345

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D  + + L   +E   +       N +I G+ K G    A+  L   +   + P + TY
Sbjct: 346 MDEGM-EMLSTMLEKGLVS-SVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I           A A+  ++ E+ L P    YN L+ G  K   +  A  +   M +
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PD+ T+   ID     G+ E A  V + ++  HA+ N F+Y+ ++ GY    ++  
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + K M   G  P++  +NV++D   K   +  AM+  D M     +P   T+  LI+
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIE 583

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              +   +DRA    ++M   G  P   TY   I     Q R  + + ++  ++ +G+L 
Sbjct: 584 EILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK----------PSNLA 593
           +   Y  LV+ YG  G+ D A   L  + D      R   +  LK             L 
Sbjct: 644 DSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLD 703

Query: 594 LN----SLINAFGEDQRDAEAFAVL-QYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           LN    S+ NA      D E   +L + M E G  P+V TY+ L+K L +V+     F
Sbjct: 704 LNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAF 761



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/504 (22%), Positives = 204/504 (40%), Gaps = 48/504 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R + +  A  L  +    +L+P  +TYN LI    +   ++ A  L   M 
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG+  D   +   I  L +  K++ +   ++++ ++    E +  L   +I G+ KA  
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQA--HQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A          G  P + T+  ++  L   G+  +A ++ + + +   KP    Y  
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTI 580

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++  ++      A   + +M  SG  P+  TY+  I AY   GR   A  ++ +++   
Sbjct: 581 LIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEG 640

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID--TFGKYNCLHH 458
              +SFIY  ++  Y   G+    F VL  M  +G EP    Y++++    F KYN    
Sbjct: 641 ILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYN--KE 698

Query: 459 AMAA--------------------------FDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            M                            F++M+ +G  P+  T++ LI    K     
Sbjct: 699 GMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLS 758

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  LF  M+E G  P    +N +++   +    E+  RLL +M     L ++ +Y  LV
Sbjct: 759 LAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLV 818

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                 G F+      +G  ++A   FR + + G     +    L++         E   
Sbjct: 819 -----CGLFE------QGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQ 867

Query: 613 VLQYMKENGLKPDVVTYTTLMKAL 636
           +   M++ G +    T+T L + L
Sbjct: 868 LRDIMEKTGCRLHSDTHTMLSQEL 891


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 224/484 (46%), Gaps = 21/484 (4%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L +   L  A   F   +    TP  +TYN+LI    +   L++ + +  +M+
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 317

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D I Y+ +I    +  ++  +   +   E++ + ++ +    +  I  F K G 
Sbjct: 318 DADCDPDVITYNALINCFCKFERMPKAF--EFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A++F    + V L+P   TY ++I A   +G   EA  + EE+ ++G+K     Y A
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  + G +K+AE V   M  +GV P++ TY+ L+  +  A   E A+ +LKEM+   
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  +Y  IL G  +    +    ++ E+K SG+  +   Y  ++D + K      A+
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + ML  G+    +T+  LID   K G    A   F  M E G  P    Y  +++ L
Sbjct: 556 TLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGL 615

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +   +E  K+L   M  +G++P+ + YT L+D   + G   +A+     L D+ +    
Sbjct: 616 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL----NLRDRMIEI-- 669

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK---ALI 637
                G++    A  +LI       +  +A  +L  M   G+ PD V Y  L+K   AL 
Sbjct: 670 -----GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 724

Query: 638 RVDK 641
           +VD+
Sbjct: 725 KVDE 728



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 200/444 (45%), Gaps = 15/444 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKL 252
            TYN +I    +  DLE A +L ++M++ G+  D + Y+ +I    +   +D  + + + 
Sbjct: 256 FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 315

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            K+ +CD    D    N +I  F K     KA  FL   +  GL P   TY+  I A   
Sbjct: 316 MKDADCDP---DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G   EA   F +++   L P    Y +L+    K G L +A  +V E+ ++G+  +  T
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+D     GR + A  V + M  +   PN   Y+ ++ G+    E +    +LKEMK
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              ++PD   Y  ++      + L  A      +   GI  + + + TL+D +FK G+  
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L EEM + G      TY  +I+ L +    ++     G M   GL PNV  YT LV
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D   ++  F+ A +  + + D+           G+ P  +A  +LI+   +     EA  
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDK-----------GMMPDKIAYTALIDGNMKHGNLQEALN 661

Query: 613 VLQYMKENGLKPDVVTYTTLMKAL 636
           +   M E G++ D+  YT L+  L
Sbjct: 662 LRDRMIEIGMELDLHAYTALIWGL 685



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/564 (24%), Positives = 240/564 (42%), Gaps = 43/564 (7%)

Query: 114 EFKLAESYRAVPAPLWHS-LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH- 171
           +F++   + +  AP+W S +L  LC       LA     W +           Y IL+H 
Sbjct: 85  DFRIVSLFDSALAPIWASRVLVELCQDAR---LALRFFEWAKGRIGFQHTSEAYCILVHI 141

Query: 172 ------------------ALGRSEKLYEAF--LLSQRQRLTPL--TYNALISACARNDDL 209
                              L R    ++ F  L + R    P    ++AL SA      L
Sbjct: 142 LFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGML 201

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E+A     KMR+        + + ++  L++  + D S  +K +K++    I+      N
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS--RKFFKDMGAAGIKRSVFTYN 259

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I    K GD   A       +  G +P   TY ++I      G   E   +FE++K++
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
              P    YNAL+  + K   +  A   + EM+ +G+ P+  TYS  IDA+   G  + A
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                +M      PN F Y+ ++      G      ++++E+  +G++ +   Y  ++D 
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +   +  A   F  ML+ G+ P+  T+  L+    K    + A+++ +EM+E+   P 
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Y  ++  L  + R E+ K L+G ++  G+  N V YTTL+D Y +SG+  +A+  LE
Sbjct: 500 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 559

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            + D            GL  + +   +LI+   +     EA      M E GL+P+V  Y
Sbjct: 560 EMLDL-----------GLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVY 608

Query: 630 TTLMKALIRVDKFH---KVFSSYL 650
           T L+  L + + F    K+F   L
Sbjct: 609 TALVDGLCKNNCFEVAKKLFDEML 632



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 46/427 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYNALI+   + + + KA   + +M+ +G   + + YS  I +  +   +  ++  K +
Sbjct: 326 ITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI--KFF 383

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++    +  +      +I    KAG+ ++A++ +      G+     TY A++  L   
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EAE VF  +  +G+ P  + Y AL+ G++K   ++ A+ ++ EM+   + PD   Y
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-- 431
             ++    N  R E A++++ E++ S    N+ IY+ ++  Y   G+      +L+EM  
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 432 ------------------KSS---------------GVEPDTHFYNVMIDTFGKYNCLHH 458
                             KS                G++P+   Y  ++D   K NC   
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD ML +G+ PD I +  LID + K G    A  L + M E G       Y  +I 
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---------LE 569
            L    + +  + LL  M  +G+LP+ V Y  L+  Y   G+ D+A+E          + 
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743

Query: 570 GLSDQAV 576
           GLSD AV
Sbjct: 744 GLSDHAV 750


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 223/502 (44%), Gaps = 31/502 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTY-----NALISACARNDDLEKALNLMSKMR 220
           ++ L   L R+++      L ++  L  + Y     N +I+   R   L  A + M K+ 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  + + ++ ++  L    ++  ++  +L   +   +   D   LN ++ G      
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAV--ELVDCMVLSQHVPDLITLNTIVNGLCLKDR 210

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S+A+  +      G  P   TY  ++  +  SG T  A  +  +++   +KP    Y  
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K G L DA    SEME  G+  +  TY+ LI ++ + GRW+    +L++M    
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   +S ++      G+      +  EM + G+EP+T  YN +I        L  A 
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              D M+S+G +PD  T+N LI+   K  + D    LF +M  RG    T TY+ +I   
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
            +  +    K++   M +QG+ P ++TY  L+D    +G  ++A+  L+ +         
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDI 510

Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                           D A + F  + + G+K    + N +++   +    +EA A+ + 
Sbjct: 511 GIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRK 570

Query: 617 MKENGLKPDVVTYTTLMKALIR 638
           MKE+G +PD  TY TL++A +R
Sbjct: 571 MKEDGYEPDGCTYNTLIRAHLR 592



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/544 (21%), Positives = 226/544 (41%), Gaps = 32/544 (5%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           R +P  +  + L  L +     DL  A+   ++   + Y    L +I+I+   R  KL  
Sbjct: 85  RPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTL-NIMINCFCRRRKLGF 143

Query: 182 AF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           AF     +         +T+N L++       + +A+ L+  M    +  D I  + ++ 
Sbjct: 144 AFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVN 203

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            L   +++  ++   L   +  +  + +      ++    K+G+ + A+  L   +   +
Sbjct: 204 GLCLKDRVSEAV--DLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKI 261

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   TY  +I  L   GR  +A + F E++  G+K     YN+L+  +   G   D   
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQ 321

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ +M    + P+  T+S LID+    G+   A+ +  EM     +PN+  Y+ ++ G  
Sbjct: 322 LLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC 381

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           +        Q++  M S G +PD   YN++I+ F K   +   M  F +M   G+  DT+
Sbjct: 382 NDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTV 441

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++TLI    +  +   A+++F+EM  +G  P   TY I+++ L +    E+   +L  M
Sbjct: 442 TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN------------------- 577
               +  ++  Y  ++     + + DDA      L  + V                    
Sbjct: 502 HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSL 561

Query: 578 -----AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                 FR M+ DG +P     N+LI A         +  +++ MK  G   D  T   +
Sbjct: 562 SEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIV 621

Query: 633 MKAL 636
           M  L
Sbjct: 622 MDML 625



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 198/448 (44%), Gaps = 17/448 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           +++ L   +++ EA  L  R      +    TY  +++   ++ +   AL+L+ KM    
Sbjct: 201 IVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK 260

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
                + Y+++I +L +  ++D +L    + E+E   I+ +    N +I  F   G    
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDAL--SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
             + L       ++P   T++A+I +L   G+  EA+ ++ E+   G++P T  YN+L+ 
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G      L +A  ++  M   G  PD  TY++LI+ +  A + +    + ++M +     
Sbjct: 379 GLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           ++  YS ++ G+    +     +V +EM S GV P    Y +++D       L  A+   
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           D+M    +E D   +N +I       + D A  LF  +  +G      +YNIM++ L ++
Sbjct: 499 DQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKR 558

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNA 578
               +   L   M+  G  P+  TY TL+  + +      +++ +E     G S  A   
Sbjct: 559 SSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTV 618

Query: 579 FRVMRTDGLKPSNLA---LNSLINAFGE 603
             VM  D L    L    LN L   FG+
Sbjct: 619 KIVM--DMLSSGELDKSFLNMLSGPFGD 644



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 170/408 (41%), Gaps = 42/408 (10%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEK 211
           N C   +  Y  +++ + +S     A  L ++   +++ P  +TY  +I    ++  L+ 
Sbjct: 224 NGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDD 283

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL+  S+M   G   +   Y+ +I S     + D     +L +++   KI  +    + +
Sbjct: 284 ALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDG--AQLLRDMITRKITPNVVTFSAL 341

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I    K G  ++A          G+ P T TY ++I  L N  R  EA  + + +   G 
Sbjct: 342 IDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC 401

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN L+ G+ K   + D   +  +M   G++ D  TYS LI  +  + +   A+ 
Sbjct: 402 DPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKK 461

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK------------------- 432
           V +EM      P    Y+ +L G  D GE +    +L +M                    
Sbjct: 462 VFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMC 521

Query: 433 ----------------SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                           S GV+ D   YN+M+    K + L  A A F +M  +G EPD  
Sbjct: 522 NANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGC 581

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           T+NTLI  H +      + +L EEM+  G+    +T  I++++L   E
Sbjct: 582 TYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGE 629



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 14/320 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P T  +N LL G    G + +A  +V  M  S  +PD  T + +++      R   A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             ++  M  +  +PN F Y  IL      G       +L++M+   ++P    Y ++ID 
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   L  A++ F  M ++GI+ +  T+N+LI      GR+D   +L  +M  R   P 
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             T++ +I+ L ++ +  + K L   M  +G+ PN +TY +L  IYG          C +
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSL--IYGL---------CND 383

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
              D+A     +M + G  P     N LIN F + ++  +   + + M   G+  D VTY
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443

Query: 630 TTLMKALIRVDKF---HKVF 646
           +TL++   +  K     KVF
Sbjct: 444 STLIQGFCQSRKLIVAKKVF 463



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 24/280 (8%)

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  + + M  S   P    ++R+        ++     + K+M+  G+  D +  N+M
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ F +   L  A +A  ++   G EP+T+T+NTL++     GR   A EL + M    +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   T N ++N L  ++R  +   L+  M A G  PN  TY  +++   +SG    A++
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C +G  D A++ F  M T G+K +    NSLI +F 
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              R  +   +L+ M    + P+VVT++ L+ +L++  K 
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 225/524 (42%), Gaps = 60/524 (11%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K LC  N  +D A +++  + KH  C    ++Y  LIHAL +  ++ EA  L +   +
Sbjct: 224 VMKALCMFNE-VDSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
                   T+N +I    + + +  A  L+ +M   G++ D + Y  ++  L R  K++ 
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNE 341

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ-GVGLSPKTATYAA 305
           +  +K+  +I C     +  +LN +I G+  +G   +A  FL       G  P   TY  
Sbjct: 342 A--RKILIKIPCP----NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G    A  +  E+   G +P    Y  L+ G  K G L++A  V+ EM   G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG----------Y 415
           +  +   Y+ LI A     +   A  +L EM     KP+ F Y+ ++ G          +
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 416 R-------------------------DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           R                          RG +Q+   ++ +M   G   D   YN +I  F
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +   +  +++M+ +G+  DTI+ N +I+   K G+ D A E   +   RG+ P  
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN ++N L +  R ++   L   ++ +G+ P+  TY T +           + +C EG
Sbjct: 636 VTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI-----------SWQCKEG 684

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + + A + F     +G  PSNL  N L+    +       F VL
Sbjct: 685 MVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 219/493 (44%), Gaps = 23/493 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           SY+L+  IL+   G   ++       +LS+    T  T+  ++ A    ++++ A +L+ 
Sbjct: 185 SYDLVLEILVT--GNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLR 242

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + I Y  +I +L++ N++  +L  KL +E+       D Q  NDVI G  K
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEAL--KLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                 A + +      G  P   TY  ++  L   G+  EA  +  ++      P    
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAI 356

Query: 338 YNALLKGYVKMGYLKDAE-FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            N L+ GYV  G LK+A+ F+   M   G  PD  TY++L+      G    AR ++ EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +PN   Y+ ++ G    G  +    VL EM + G+  ++  YN +I    +   +
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H A+     M ++G +PD  T+N+LI    K  R D A  LF  M   G      TYN +
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ L  +  ++    L+ +M  +G   + +TY  L+  + + G  +  +E  E       
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ------ 590

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M  DGL    ++ N +IN   +  +   AF  L+     G  PD+VTY +++  L
Sbjct: 591 -----MIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 637 IRVDKFHKVFSSY 649
            +V +  +  + +
Sbjct: 646 CKVGRIKEALNLF 658



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 187/466 (40%), Gaps = 81/466 (17%)

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q GY   F  Y + I  L    K    L+ KL  +++ + I     +   ++  + KAG 
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKF--KLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ 162

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+R L                            ++  AV+        +P  K+Y+ 
Sbjct: 163 PGQAIRLL----------------------------LDMRAVYL------CEPTFKSYDL 188

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L+  V     + A  V  +M   GV P   T+ +++ A       +SA  +L++M    
Sbjct: 189 VLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PNS +Y  ++     + +     ++L+EM   G  PD   +N +I    K N +H A 
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308

Query: 461 AAFDRMLSEGIEPDTITW-------------------------------NTLIDCHFKCG 489
              DRML  G  PD +T+                               NTLI+ +   G
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368

Query: 490 RYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           +   A+    E M   G+ P   TYNI+++ L ++      + L+  M  +G  PNV+TY
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             LV+             C  GL ++A      M   GL  +++  N LI A    ++  
Sbjct: 429 AILVNGL-----------CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
            A  +L  M   G KPD+ TY +L+  L +VD+  + F   LF N+
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFR--LFHNM 521



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 17/242 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL----CYSYELLYSILIHALGRSEKLYEAF- 183
           ++SL+  LC  +  ID A+ +      HN+      +  + Y+ LIHAL R     +A  
Sbjct: 498 YNSLIYGLCKVDR-IDEAFRLF-----HNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               +L +   L  +TYN LI A  +  ++EK L L  +M  DG   D I+ +++I  L 
Sbjct: 552 LVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLC 611

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K+D++   +  ++        D    N V+ G  K G   +A+      Q  G+ P 
Sbjct: 612 KVGKVDNAF--EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPD 669

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY   I+     G   +A + F    E+G  P    +N L+   +K    ++  FV+ 
Sbjct: 670 AFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLD 729

Query: 360 EM 361
           E+
Sbjct: 730 EL 731


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 214/496 (43%), Gaps = 24/496 (4%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKAL 213
           CY+   +Y ++I A  R     +A  L        +      Y   IS   +  D ++AL
Sbjct: 181 CYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRAL 240

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++ KMR+ G+    + YS V+  L +  ++D +L  K    +   K ++D  L   ++ 
Sbjct: 241 QVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK-KMDVVLATMLMH 299

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G+   G+  KA+         G++P   TY  +I      G + E   +  ++ E GL  
Sbjct: 300 GYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLL 359

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
            T  +N ++KG ++    KDA  ++  +  +GV PD  TY  LI       +   A  + 
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLW 418

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M+ +  KP+   Y  +L GY ++G      ++  EM   G  P+   Y  ++  + K 
Sbjct: 419 DKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKK 478

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
               +A A  + M   G+     T+N LI+  +   R    +E+ +     G+ P T TY
Sbjct: 479 KAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTY 538

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +IN   +         +   MR +G+ PN+VTYT+ +D Y           C     D
Sbjct: 539 NSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY-----------CRTNCCD 587

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL- 632
            AV     +R DG++P   A N+ I+ F +    + A   L  + ++GL PDV  Y +  
Sbjct: 588 LAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647

Query: 633 -----MKALIRVDKFH 643
                +K +    KF+
Sbjct: 648 TGYKNLKMMAEASKFY 663



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 15/443 (3%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+   AR      AL L  +MR  G + D   Y +VI++  R      ++  +L+ E+  
Sbjct: 156 LLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAV--RLFDEMAG 213

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             ++ D ++    I G  K  DA +A++ LG  +  G  P   TY++V+  L   GR  E
Sbjct: 214 AGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDE 273

Query: 319 AEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           A  + ++ L  +G K        L+ GY   G +  A  +  E+   GV P   TY +LI
Sbjct: 274 ALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLI 333

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
                 G  +    + ++M       +++ ++ ++ G      W+    +L+ +  +GV 
Sbjct: 334 KGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV- 392

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y  +I    K+  LH A+  +D+M   G++P  +T+++L+  + + GR D A +L
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKL 452

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           + EM ++G+ P   TY  ++    +++ +++   LL  MR  G+     TY  L++    
Sbjct: 453 YSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYM 512

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
             R  +  E L+          R + ++G  P+ +  NS+IN F +      AF + + M
Sbjct: 513 VNRVCEVDEMLK----------RFL-SEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 618 KENGLKPDVVTYTTLMKALIRVD 640
           ++ G+ P++VTYT+ +    R +
Sbjct: 562 RKKGITPNIVTYTSFIDGYCRTN 584



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 212/505 (41%), Gaps = 31/505 (6%)

Query: 154 QKHNLCYSYELLYSILIHA-LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKA 212
           +K ++  +  L++   +H  +G++  L++  ++S     T +TY  LI  C      ++ 
Sbjct: 287 KKMDVVLATMLMHGYCLHGEVGKALDLFDE-VVSDGVTPTNVTYGVLIKGCDAEGMSDET 345

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDV 271
             L  +M + G       ++LVI+ L R  +   ++ L +L  +     +   G L++  
Sbjct: 346 YKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCLIH-- 403

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
                K     +A+      +  G+ P   TY +++      GR  EA  ++ E+ + G 
Sbjct: 404 --WLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGF 461

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    Y  L+KGY+K     +A  +++EM ++GV   ++TY++LI+      R      
Sbjct: 462 PPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDE 521

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +LK        P +  Y+ I+ G+   G     F + ++M+  G+ P+   Y   ID + 
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           + NC   A+     +  +GI+PD   +N  ID   K G   RA      + + G  P  T
Sbjct: 582 RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----- 566
            YN  +      +   +  +   +M  Q ++ +   YTTL+D + + G    A+E     
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701

Query: 567 -------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                              C  G  D A      MR   + P+ +  N LINA   D + 
Sbjct: 702 MANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKL 761

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTL 632
            EAF +   M  +G+ PD  TY  L
Sbjct: 762 QEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 161/354 (45%), Gaps = 13/354 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   +   ++   +      +A  +F+E++  G     K Y+ +++  V+ G   DA
Sbjct: 145 GVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDA 204

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM  +GV PDE  Y++ I         + A  VL +M  +  +P    YS ++  
Sbjct: 205 VRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDV 264

Query: 415 YRDRGEWQRTFQVLKEMK-SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
               G      ++  +M  ++G + D     +++  +  +  +  A+  FD ++S+G+ P
Sbjct: 265 LVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTP 324

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
             +T+  LI      G  D   +L  +M E+G    T  +N++I  L   +RW+D   LL
Sbjct: 325 TNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             +   G+ P+V TY  L+    +  +             +AVN +  M+  G+KPS + 
Sbjct: 385 ELVVDTGV-PDVFTYGCLIHWLCKHQKLH-----------EAVNLWDKMKEAGVKPSIVT 432

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +SL+  + E  R  EA  +   M + G  P+ VTYTTLMK  I+   F   ++
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYA 486


>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
          Length = 633

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 199/443 (44%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           RL   TY  L+ A  R+ ++ K   +  KMR+ GY  D   Y++++ +L +   +D +  
Sbjct: 180 RLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQA-- 237

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +++++++ +  + D      +I    KAG  +K +  L      G       Y  VI A
Sbjct: 238 YQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEA 297

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +    EA  +  ++ ES  +P    Y+ +L      G L     ++     SG L +
Sbjct: 298 LGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDIC--SGCL-N 354

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              YS LI A   +G    A  V   M  SH K + + +  +L    +  +      +L 
Sbjct: 355 RPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLH 414

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   G+  D   YN++    GK   +    + +D M + G+ PD  T+N +I    + G
Sbjct: 415 MMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVG 474

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A ELFEEM++    P   TYN MIN LG+    ++   L  +M+ +G  P+V TY+
Sbjct: 475 LVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYS 534

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++ +G+S +            D A + F  M   G  P+ +  N L++      +  E
Sbjct: 535 ILIECFGKSNKV-----------DMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTE 583

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
           A    + +K+ GL PD +TY+ L
Sbjct: 584 AHKFYETLKQQGLTPDSITYSIL 606



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 201/410 (49%), Gaps = 17/410 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----L 184
           +++L N  +    +D AY V   + K N C      Y+ILI   G++ K  +       +
Sbjct: 221 YNMLLNALAKAGMVDQAYQVFEDM-KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEM 279

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +S+   L  + YN +I A  +N  +++A+ ++SKM +     +   YS+++  L+   + 
Sbjct: 280 VSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQ- 338

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
               L +L + ++     L+  + + +I    K+G AS+A                  + 
Sbjct: 339 ----LHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFV 394

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EM 361
           +++ AL N+ +T EA  +   + E G+      YN +   +  +G LK   F+ S    M
Sbjct: 395 SMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMI---FSALGKLKQVSFMSSLYDTM 451

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             +GV+PD  TY+++I ++   G  + A  + +EME    KP+   Y+ ++      G+ 
Sbjct: 452 RANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDL 511

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                + K+M+  G +PD   Y+++I+ FGK N +  A + FD M+++G  P+ +T+N L
Sbjct: 512 DEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNIL 571

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +DC  + G+   A + +E ++++G  P + TY+I+  L    +R   +++
Sbjct: 572 LDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLESRSQRTVRIRK 621



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 185/402 (46%), Gaps = 14/402 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L++AL   G  ++ Y+ F   ++    P   TY  LI    +     K ++L+ +M 
Sbjct: 221 YNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMV 280

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE--CDKIELDGQLLNDVIVGFAKA 278
            +G   + I Y+ VI++L +   +D ++   L K IE  C   +    ++ DV+   +  
Sbjct: 281 SEGCVLNLIAYNTVIEALGKNKMVDEAIFM-LSKMIESDCRPNQFTYSIMLDVL---STG 336

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +    L +  G    P    Y+ +I AL  SG   EA +VF  +  S  K    A+
Sbjct: 337 GQLHRLNEILDICSGCLNRP---VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAF 393

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            ++L+         +A  ++  M   G+  D   Y+++  A     +      +   M  
Sbjct: 394 VSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRA 453

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   P+ F Y+ +++ +   G   +  ++ +EM+    +PD   YN MI+  GK   L  
Sbjct: 454 NGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDE 513

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M  +G +PD  T++ LI+C  K  + D A  LF+EM  +G  P   TYNI+++
Sbjct: 514 AHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLD 573

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
            L  + +  +  +    ++ QGL P+ +TY+ L  +  +S R
Sbjct: 574 CLERRGKTTEAHKFYETLKQQGLTPDSITYSILERLESRSQR 615



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 233/566 (41%), Gaps = 64/566 (11%)

Query: 116 KLAESYR-----AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           +LA +Y      A P+P   S+   +  + +   L     S  ++H +C    +L S + 
Sbjct: 4   RLATTYAGRIAAATPSPSGPSITVTVSPTPAPTPLDTRGYSLPRRHLICAVARILRSPVS 63

Query: 171 HALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           H         + +L S R  LT    + ++ A A +  L  +    +     G+  D  +
Sbjct: 64  HTPLLD---LDDYLRSLRLTLTTAEASEVMKALAPDTSLALSFFRFAATSLPGFRHDAFS 120

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ ++  L  +N+ D +   +L  E+E D +  +   +N ++      G   +  R L +
Sbjct: 121 YNRIL-VLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLV------GMGVEVGRCLDL 173

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           A   GL     TY  ++ A   S    +   V+E+++  G K    AYN LL    K G 
Sbjct: 174 ASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGM 233

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW------------------------ 386
           +  A  V  +M+++   PD +TY++LI     AG+                         
Sbjct: 234 VDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNT 293

Query: 387 -----------ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
                      + A  +L +M  S  +PN F YS +L      G+  R  ++L       
Sbjct: 294 VIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCL 353

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             P    Y+ +I    K      A + F RM +   + D   + ++++      +   A 
Sbjct: 354 NRP---VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAI 410

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L   M E+G       YN++ + LG+ ++   +  L   MRA G++P+V TY  ++  +
Sbjct: 411 DLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSF 470

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G+ G  D A E  E + D +            KP  +  NS+IN  G++    EA  + +
Sbjct: 471 GRVGLVDKASELFEEMEDGSC-----------KPDVVTYNSMINCLGKNGDLDEAHMLFK 519

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDK 641
            M+E G  PDV TY+ L++   + +K
Sbjct: 520 DMQEKGYDPDVFTYSILIECFGKSNK 545



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 29/319 (9%)

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A  +++EMER GV  +  T +LL+      GR       L        + N + Y  ++
Sbjct: 137 EAMRLIAEMERDGVPGNISTVNLLVGMGVEVGR------CLDLASKWGLRLNGYTYKCLV 190

Query: 413 AGY-RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
             + R R  W + F+V ++M+  G + D   YN++++   K   +  A   F+ M     
Sbjct: 191 QAHLRSREVW-KGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYC 249

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  T+  LI    K G+  +   L EEM   G       YN +I  LG+ +  ++   
Sbjct: 250 DPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIF 309

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIY---GQSGRFDDAIE------------------CLEG 570
           +L  M      PN  TY+ ++D+    GQ  R ++ ++                  C  G
Sbjct: 310 MLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSG 369

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
            + +A + F  M     K    A  S++ A    ++  EA  +L  M E G+  DV  Y 
Sbjct: 370 HASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYN 429

Query: 631 TLMKALIRVDKFHKVFSSY 649
            +  AL ++ +   + S Y
Sbjct: 430 MIFSALGKLKQVSFMSSLY 448



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/403 (19%), Positives = 172/403 (42%), Gaps = 36/403 (8%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +++ F+   D ++AMR +   +  G+    +T   ++      G  +E     +   + G
Sbjct: 125 LVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLV------GMGVEVGRCLDLASKWG 178

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L+     Y  L++ +++   +     V  +M R G   D   Y++L++A A AG  + A 
Sbjct: 179 LRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAY 238

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            V ++M+ ++  P+++ Y+ ++      G+  +   +L+EM S G   +   YN +I+  
Sbjct: 239 QVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEAL 298

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           GK   +  A+    +M+     P+  T++ ++D     G+  R  E+ +        P  
Sbjct: 299 GKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRP-- 356

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             Y+ +I  L +     +   +   M       +   + ++++    + +  +AI+ L  
Sbjct: 357 -VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHM 415

Query: 571 LSDQAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQR 606
           + ++ +                          +  MR +G+ P     N +I++FG    
Sbjct: 416 MPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGL 475

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             +A  + + M++   KPDVVTY +++  L +   +D+ H +F
Sbjct: 476 VDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLF 518


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 213/452 (47%), Gaps = 18/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS-- 247
           RL    Y++L+ + A+ D    A     +M  DG+    I+Y  ++ +L +    +++  
Sbjct: 157 RLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAV 306
            + K+ K        LD  ++  +++GF +  +   A++   +    G  +P + +Y+ +
Sbjct: 217 FMCKILKV----GFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSIL 272

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L   GR  EA  + +++ E G +P T+ Y  L+K     G +  A  +  EM   G 
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGC 332

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+ HTY++LID     G+ E A  V ++M      P+   Y+ ++ GY   G     F+
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFE 392

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L  M+    +P+   +N +++   +    + A+    RML  G+ PD +++N LID   
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  + A +L   M      P   T+  +IN   +Q + +     LG M  +G+  + V
Sbjct: 453 REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           T TTL+D     G+  DA+  LE L        R++ T    P   +LN +++   +  +
Sbjct: 513 TGTTLIDGVCNVGKTRDALFILETLVK-----MRMLTT----PH--SLNVILDMLSKGCK 561

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             E  A+L  + + GL P VVTYTTL+  LIR
Sbjct: 562 LKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 228/525 (43%), Gaps = 56/525 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS L+ +L + +  + A++  +R       +  + Y  +++A  +N   E A   M K+ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 221 QDGYHCD-FINYSLVIQSLTRTNKIDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + G+  D  I  SL++      N  D+  +   + +E  C    +   +L   I G  + 
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSIL---IHGLCEV 279

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A          G  P T TY  +I AL + G   +A  +F+E+   G KP    Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTY 339

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+ G  + G +++A  V  +M + G+ P   TY+ LI+ Y   GR   A  +L  ME 
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPN   ++ ++ G    G+  +   +LK M  +G+ PD   YNV+ID   +   ++ 
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNV 459

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG------------- 505
           A      M S  +EPD +T+  +I+   K G+ D A      M  +G             
Sbjct: 460 AYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519

Query: 506 -----------YFPCTT-----------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                       F   T           + N+++++L +  + ++   +LG +   GL+P
Sbjct: 520 GVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVP 579

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +VVTYTTLVD   +SG    +   LE           +M+  G  P+      +IN   +
Sbjct: 580 SVVTYTTLVDGLIRSGDISGSFRMLE-----------LMKLSGCLPNVYPYTIIINGLCQ 628

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
             R  EA  +L  M+++G+ P+ VTYT ++K  +   K  +   +
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 22/500 (4%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
           D+  ++N L +N  +E+A         + +V F L +S+      +  SLL   C   + 
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMCK---ILKVGF-LLDSH------IVTSLLLGFCRGLNL 246

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
            D A  V   + +   C    + YSILIH L    +L EAF L  +      + +  TY 
Sbjct: 247 RD-ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE 255
            LI A      ++KA NL  +M   G   +   Y+++I  L R  KI+  + + +K+ K 
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK- 364

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
              D I       N +I G+ K G    A   L + +     P   T+  ++  L   G+
Sbjct: 365 ---DGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  + + + ++GL P   +YN L+ G  + G++  A  +++ M    + PD  T++ 
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+A+   G+ + A   L  M       +    + ++ G  + G+ +    +L+ +    
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +    H  NV++D   K   L   +A   ++   G+ P  +T+ TL+D   + G    + 
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSF 601

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            + E M+  G  P    Y I+IN L +  R E+ ++LL  M+  G+ PN VTYT +V  Y
Sbjct: 602 RMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 556 GQSGRFDDAIECLEGLSDQA 575
             +G+ D A+E +  + ++ 
Sbjct: 662 VNNGKLDRALETVRAMVERG 681



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 153/348 (43%), Gaps = 57/348 (16%)

Query: 306 VITALSNSGRTIEAE-----AVFEELKE-SGLKPRTKAYNALLKGYVKM--GYLKDAEFV 357
           VI AL       E E     + F+EL+E SG +     Y++LL    K+  G+L  A   
Sbjct: 125 VIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFL--AYVT 182

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
              ME  G +     Y  +++A    G  E+A + +                        
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM------------------------ 218

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTI 476
                   ++LK     G   D+H    ++  F +   L  A+  FD M  EG   P+++
Sbjct: 219 -------CKILK----VGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSV 267

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           +++ LI    + GR + A  L ++M E+G  P T TY ++I  L ++   +    L   M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            A+G  PNV TYT L+D             C +G  ++A    R M  DG+ PS +  N+
Sbjct: 328 IARGCKPNVHTYTVLIDGL-----------CRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           LIN + +D R   AF +L  M++   KP+V T+  LM+ L RV K +K
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 164/359 (45%), Gaps = 9/359 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +  L+  LC  +  I+ A  V   + K  + +   + Y+ LI+     GR    +E   +
Sbjct: 339 YTVLIDGLCR-DGKIEEANGVCRKMVKDGI-FPSVITYNALINGYCKDGRVVPAFELLTV 396

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +++   P   T+N L+    R     KA++L+ +M  +G   D ++Y+++I  L R   
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           ++ +   KL   +    +E D      +I  F K G A  A  FLG+    G+S    T 
Sbjct: 457 MNVA--YKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  + N G+T +A  + E L +  +     + N +L    K   LK+   ++ ++ +
Sbjct: 515 TTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINK 574

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G++P   TY+ L+D    +G    +  +L+ M++S   PN + Y+ I+ G    G  + 
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++L  M+ SGV P+   Y VM+  +     L  A+     M+  G E +   +++L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 46/347 (13%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L+   C     +  A+ +++ ++K   C      ++ L+  L R  K Y+A  L +R
Sbjct: 374 YNALINGYCKDGRVVP-AFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                L+P  ++YN LI    R   +  A  L++ M       D + ++ +I +  +  K
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGK 491

Query: 244 IDSS---LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA------------------- 281
            D +   L   L K I  D  E+ G  L D +    K  DA                   
Sbjct: 492 ADVASAFLGLMLRKGISLD--EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL 549

Query: 282 -------SKAMRF------LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
                  SK  +       LG    +GL P   TY  ++  L  SG    +  + E +K 
Sbjct: 550 NVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKL 609

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG  P    Y  ++ G  + G +++AE ++S M+ SGV P+  TY++++  Y N G+ + 
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGY--RDRGEWQRTFQVLKEMKS 433
           A   ++ M     + N  IYS +L G+    +G  +   + +KE+ S
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELIS 716



 Score = 45.4 bits (106), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 10/152 (6%)

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +  M+  G+      Y  ++N L +    E  +  +  +   G L +    T+L+  + +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCR 242

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                DA++  + +S +   A          P++++ + LI+   E  R  EAF +   M
Sbjct: 243 GLNLRDALKVFDLMSREGTCA----------PNSVSYSILIHGLCEVGRLEEAFGLKDQM 292

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E G +P   TYT L+KAL       K F+ +
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 46/258 (17%)

Query: 153 LQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARND 207
           L K + C      Y+I+I+ L   GR E+  +     Q   ++P  +TY  ++     N 
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY---KEIECDKIELD 264
            L++AL  +  M + GY  +              ++I SSLL+      K I     E D
Sbjct: 666 KLDRALETVRAMVERGYELN--------------DRIYSSLLRGFVLSQKGIR----ETD 707

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
            + + ++I    + G ++  +                    ++T L   GRT E+  + +
Sbjct: 708 PECIKELISVVEQLGGSTSGLCIF-----------------LVTRLCKEGRTDESNGLVQ 750

Query: 325 ELKESGLKPRTKAYNALLKGYV-KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            + +SG+    KA + +++ Y  K  + K  E +   + +SG +P   ++ L+I      
Sbjct: 751 TILKSGVFLE-KAIDIIMESYCSKKKHTKCVELITLVL-KSGFVPSFKSFCLVIQGLKKE 808

Query: 384 GRWESARIVLKEMEVSHA 401
           G  E AR ++ E+  S+ 
Sbjct: 809 GDTERARELVMELLTSNG 826


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 220/512 (42%), Gaps = 57/512 (11%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L++ L ++ +L  A LL      +P  + +  +I+   R   L++A +++ +  + G   
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEP 74

Query: 227 DFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           D++ Y++ I  L +  ++D +  LL+K+  E +C    +    L D   G  KAG   +A
Sbjct: 75  DYVTYNVFIDGLCKAERVDDAFQLLKKM-DEKKCLPTTVTYTALVD---GLLKAGRLDEA 130

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           M  L      G SP   TY  VI  LS +GR  EA  +F ++  +G +P    Y AL+ G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 345 YVKMGYLKDAEFVVSEMERS----GVLPD------------------------------- 369
             K+G L +A   +++M  +    GV PD                               
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSL 250

Query: 370 ---EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
                T++ L+ A   A R E A   +K+M      P  F Y+ ++ G+   G       
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
            LKE    G  PD   Y  +ID   K   +      F  M + G EPD +T+  LID   
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K     +A  ++ +M + G    T TYNI+++ L +  R  +       M  +G +  VV
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY+ L+D +           C EG    AV  FR M   G +P+ ++ N +I       +
Sbjct: 431 TYSALMDGF-----------CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            A+A+   + + +  L PDV T+ + +  L +
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 195/421 (46%), Gaps = 21/421 (4%)

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           ++  L +T ++D ++L  L  E+ C     D      VI G  +     +A   L  A  
Sbjct: 15  LLNGLCKTGQLDRAML--LLDEMPCSP---DMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            G  P   TY   I  L  + R  +A  + +++ E    P T  Y AL+ G +K G L +
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ +M   G  P   TY+++ID  + AGR E AR +  +M  +  +P++F+Y+ +++
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 414 GYRDRGEWQRTFQVLKEMK----SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
           G    G+       L +M     + GVEPD   +N++I        L  A+A FD  L +
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LDD 248

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
            ++    T+N L+    K  R + A    ++M ER  FP   TY  +++   +  R ++ 
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
              L     +G +P+ VTYT+++D   + GR ++  E            F  MR  G +P
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE-----------RFHEMRNRGYEP 357

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +   +LI+ F + +   +A  V + M ++G     VTY  ++  L +  +  + ++++
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417

Query: 650 L 650
           L
Sbjct: 418 L 418



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/609 (23%), Positives = 255/609 (41%), Gaps = 75/609 (12%)

Query: 85  TPLLNFLSENSNSESASALASS-PSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           T LLN L +    + A  L    P S + V F +              ++  LC     +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTV--------------VINGLCREKR-L 57

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNA 198
           D A++V+    +   C    + Y++ I  L ++E++ +AF L ++   ++  P  +TY A
Sbjct: 58  DEAFSVLERAVRAG-CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L+    +   L++A+ ++ +M + G       Y++VI  L++  +++ +  ++++ ++  
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEA--RRIFVDMLG 174

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFL------GMAQGV------------------ 294
           +    D  +   +I G AK G   +A+ +L      G A+GV                  
Sbjct: 175 NGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASG 234

Query: 295 --------------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                          L     T+  ++ AL  + RT EA A  +++ E    P    Y +
Sbjct: 235 NLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTS 294

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K+G L +A   + E    G +PD  TY+ +ID     GR E       EM    
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P++  Y+ ++ G+       +  +V ++M  SG    T  YN+++D   K   +  A 
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 414

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A F  M   G     +T++ L+D     G    A ELF  M +RG  P   +YNI+I  L
Sbjct: 415 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
               +          +  + L P+V T+ +   ++G   R D             V  F 
Sbjct: 475 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF--LHGLCQRLDTV--------GDGVELFE 524

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--- 637
            M + G  P+  + + L++             +   M   G+ PDVV + TL++ L    
Sbjct: 525 SMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAG 584

Query: 638 RVDKFHKVF 646
           RVD+  +VF
Sbjct: 585 RVDEALEVF 593



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/506 (24%), Positives = 215/506 (42%), Gaps = 64/506 (12%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  L ++ ++ EA      +L    R     Y ALIS  A+   L++AL  +++M 
Sbjct: 149 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMV 208

Query: 221 QDG----YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV--- 273
           ++G       D + ++LVI+ L  +  ++ +L    + E++ D ++L     N ++    
Sbjct: 209 ENGCARGVEPDVVIHNLVIRQLCASGNLEDAL--AYFDELD-DSLDLTHFTFNPLVAALC 265

Query: 274 --------------------------------GFAKAGDASKAMRFLGMAQGVGLSPKTA 301
                                           GF K G   +A+  L  A   G  P   
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY ++I  L   GR  E    F E++  G +P    Y AL+ G++K   +  A  V  +M
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            +SG +    TY++++D    AGR   A      ME          YS ++ G+   G  
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               ++ + M   G EP+   YN++I    +   L  A   F+++L   + PD  T+N+ 
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 482 IDCHFKCGRYDR---AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +  H  C R D      ELFE M  +G  P   +Y+I+++ +      E    +   M +
Sbjct: 506 L--HGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G+ P+VV + TL+     +GR D+A+E    L  ++             P   +  SL+
Sbjct: 564 RGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA------------PDAWSYWSLL 611

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKP 624
           +A    +R  EA  +  +MK  G  P
Sbjct: 612 DALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 158/392 (40%), Gaps = 55/392 (14%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T    A++  L  +G+   A  + +E+  S   P   A+  ++ G  +   L +A  V+ 
Sbjct: 9   TRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLE 65

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
              R+G  PD  TY++ ID    A R + A  +LK+M+     P +  Y+ ++ G    G
Sbjct: 66  RAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAG 125

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                  +L++M   G  P    Y V+ID   K   +  A   F  ML  G  PD   + 
Sbjct: 126 RLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185

Query: 480 TLIDCHFKCGRYDRAEELFEEMQE----RGYFP------------CTT------------ 511
            LI    K G+ D A     +M E    RG  P            C +            
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245

Query: 512 ----------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
                     T+N ++  L + ER E+    +  M  +   P + TYT+LVD + + GR 
Sbjct: 246 LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRL 305

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D+A+  L+    +AV         G  P  +   S+I+   +  R  E       M+  G
Sbjct: 306 DEALLQLK----EAVER-------GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 622 LKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
            +PD VTY  L+   ++   + K H+V+   L
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 386



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 30/307 (9%)

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           L D    + L++     G+ + A ++L EM  S   P+   ++ ++ G          F 
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFS 62

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           VL+    +G EPD   YNV ID   K   +  A     +M  +   P T+T+  L+D   
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K GR D A  + E+M E+G  P   TY ++I+ L +  R E+ +R+  +M   G  P+  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 547 TYTTLVDIYGQSGRFDDAI---------ECLEGLSDQAVNAFRVMRT------------- 584
            YT L+    + G+ D+A+          C  G+    V    V+R              
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 585 -----DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
                D L  ++   N L+ A  + +R  EA A ++ M E    P + TYT+L+   +++
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 640 DKFHKVF 646
            +  +  
Sbjct: 303 GRLDEAL 309



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I++  L ++ ++ EA+   L+  +R    T +TY+AL+       ++  A+ L  +M 
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   + ++Y+++I+ L R  K+  +    +KL +   C  +      L+ +       
Sbjct: 457 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTV 516

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD  +    + ++QG   SP   +Y+ ++  +  +G       +F E+   G+ P    +
Sbjct: 517 GDGVELFESM-VSQGT--SPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVF 573

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L++     G + +A  V  E+ER    PD  +Y  L+DA +   R E AR++   M++
Sbjct: 574 NTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDALSRCERMEEARLLSFHMKL 632

Query: 399 SHAKPNSF 406
               P  +
Sbjct: 633 QGCAPRHY 640


>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 674

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 219/471 (46%), Gaps = 8/471 (1%)

Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           R+E ++      +  R    TY ALISACA+  + E ++N + +MRQ G   + + YS V
Sbjct: 127 RAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTV 186

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I +  R+++   ++  KL + +  D I       N VI    K+G  S A+  L     +
Sbjct: 187 ISACERSDQWQKAV--KLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDM 244

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P   T+A+ + A   + +      + ++++E  +     AY   +    ++G     
Sbjct: 245 GCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARC 304

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
              + EM+ +GV  D  T S+ I A A+ G+W  A  +L++M      PN   Y+ ++  
Sbjct: 305 VRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVV 364

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
            R  G+ +R  ++L  M+S GV P+   Y+V I           A+A    M  EG+ P+
Sbjct: 365 LRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPN 424

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            I++NT I      G+   A +L +EM+ RG      TY   +        W+    LL 
Sbjct: 425 EISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELLA 484

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            MR + + PN + Y  ++     +G+   A+   + + ++A+  F  ++    +  ++ +
Sbjct: 485 AMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQI-EEAIQLFNKLQ--ARRNCSVTI 541

Query: 595 NS---LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +S   L++A   + R  EA  + Q M++  + P V  YT++++A  R  ++
Sbjct: 542 HSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQY 592



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 25/369 (6%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKD 353
            + P   +Y  VITA +N+ +   AE +F E+ KE G++P    Y AL+    K G  +D
Sbjct: 104 AVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWED 163

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           +   + +M +SG+ P+   YS +I A   + +W+ A  +L+ M      P +  Y+ +++
Sbjct: 164 SVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVIS 223

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G+W     +L EM   G  P    +   +    +    HH +   D+M  + +  
Sbjct: 224 ACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWV 283

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D   + T I    + G++ R     +EM   G      T ++ I+   ++ +W   ++LL
Sbjct: 284 DKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLL 343

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------------- 578
            +M   GL PNV+TYT+L+ +  + G+ + AI+ L+ +  + V                 
Sbjct: 344 EDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADA 403

Query: 579 ---------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                     + M  +G+ P+ ++ N+ I A G+  + +EA  ++  M+  G+K  VVTY
Sbjct: 404 KEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTY 463

Query: 630 TTLMKALIR 638
            T + A  R
Sbjct: 464 GTAVAACQR 472



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 199/424 (46%), Gaps = 18/424 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLL---SQRQRLTPLT--YNALISACARNDDLEKALNLMSK 218
           ++YS +I A  RS++  +A  L    +R  + P+T  YN +ISAC ++     A++L+ +
Sbjct: 181 VIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDE 240

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M   G     + ++  + +  R  +    L  ++  +++ D++ +D       I    + 
Sbjct: 241 MSDMGCPPGPVTFASAMLACERARQWHHVL--RIMDQMQEDEVWVDKYAYTTAIHAAGQL 298

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  ++ +R+L      G++    T +  I+A ++ G+  +AE + E++ + GL P    Y
Sbjct: 299 GKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITY 358

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            +L+    + G  + A  ++  M   GV+P+  TYS+ I A A+A  W  A  +LKEME 
Sbjct: 359 TSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRALALLKEMER 418

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   Y+  +    D G+      ++ EM+S GV+     Y   +    +      
Sbjct: 419 EGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGTAVAACQRAADWKM 478

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA-------EE---LFEEMQERGYFP 508
           A+     M  E IEP+ I +  +I      G+  +A       EE   LF ++Q R    
Sbjct: 479 ALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQLFNKLQARRNCS 538

Query: 509 CTT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
            T  +Y  +++ L  + RW++   L   M  + ++P V  YT++V    +SG++D A+  
Sbjct: 539 VTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRACERSGQYDVALRL 598

Query: 568 LEGL 571
           L+ +
Sbjct: 599 LDDM 602



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 12/178 (6%)

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWED 528
            +EP+ +++N +I       +  RAE +F EM +ERG  P   TY  +I+   ++  WED
Sbjct: 104 AVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWED 163

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
               L  MR  GL PN V Y+T++    +S ++  A++ L           R MR DG+ 
Sbjct: 164 SVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKAVKLL-----------RTMRRDGIL 212

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P  +  N++I+A G+  + + A ++L  M + G  P  VT+ + M A  R  ++H V 
Sbjct: 213 PVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVL 270


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 204/465 (43%), Gaps = 19/465 (4%)

Query: 185 LSQRQRLTPLTYNALISACA--RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           +  R R+ P T+   I+A A  R    ++AL ++  M + G   D + Y  VI +L    
Sbjct: 162 MVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQG 221

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            ++ +    L  E+       D    ND++ G    G   +A R +      G  P   T
Sbjct: 222 GVNEA--ATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAIT 279

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++  L  + +  EA  +   + E  +      +N ++   +  G LK+A  +   M 
Sbjct: 280 YGFLLKGLCLASQVEEARTMLGRVPELNVV----LFNTVIGRCLLDGKLKEAAELYETMG 335

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  PD HTYS+LI      GR  SA  +L+EME     P+   Y+ +L  +   G W 
Sbjct: 336 SKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWD 395

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L+ M   G+  +   YN MI    K   +  AM     M S+G +PD  T+NT+I
Sbjct: 396 NIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTII 455

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                  + + AE LFE +   G      TYN +I+ L     W+D   L  +M   G  
Sbjct: 456 YHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCS 515

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            ++V+Y  L+    + G  D +I  L  ++++           G+KP+N++ N LI+   
Sbjct: 516 LDIVSYNGLIKALCRDGNVDRSIMLLSEMAEK-----------GIKPNNVSYNLLISELC 564

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + +R  +A  + + M    L PD+VTY TL+  L ++   H   +
Sbjct: 565 KTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALN 609



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 170/395 (43%), Gaps = 3/395 (0%)

Query: 159 CYSYELLYSILIHALGRSEKLYEA-FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C    + Y  L+  L  + ++ EA  +L +   L  + +N +I  C  +  L++A  L  
Sbjct: 273 CVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYE 332

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M   G   D   YS++I  L +  ++ S++  KL +E+E             ++  F +
Sbjct: 333 TMGSKGCPPDAHTYSILIHGLCKLGRLGSAM--KLLREMEDKGFAPSIVTYTILLHSFCR 390

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G        L +    GLS     Y  +I A+    R  +A    +E+K  G KP    
Sbjct: 391 NGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICT 450

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++        +++AE++   +   GV+ +  TY+ LI A    G W+ A  +  +M 
Sbjct: 451 YNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMV 510

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +     +   Y+ ++      G   R+  +L EM   G++P+   YN++I    K   + 
Sbjct: 511 LHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVR 570

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     ML++ + PD +T+NTLI+   K G    A  L E++          TYNI+I
Sbjct: 571 DALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +   +     D   LL      G+ PN  T+  +V
Sbjct: 631 SWHCKARLLHDASMLLNRAVTSGITPNERTWGIMV 665



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 184/457 (40%), Gaps = 39/457 (8%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHAL----GRSEK---LYEAFLLSQRQRLTPLTY 196
           D A  ++  + +H  C    +LY  +IHAL    G +E    L E FL+     +   T+
Sbjct: 189 DEALTMLRSMARHG-CVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVN--TF 245

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--------- 247
           N ++        L +A  L+ +M   G   + I Y  +++ L   ++++ +         
Sbjct: 246 NDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPE 305

Query: 248 -------------LLQ-------KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
                        LL        +LY+ +       D    + +I G  K G    AM+ 
Sbjct: 306 LNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKL 365

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L   +  G +P   TY  ++ +   +G      A+ E + + GL    + YN ++    K
Sbjct: 366 LREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK 425

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              + DA   + EM+  G  PD  TY+ +I    N  + E A  + + +       N+  
Sbjct: 426 DRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAIT 485

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++      G WQ    +  +M   G   D   YN +I    +   +  ++     M 
Sbjct: 486 YNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMA 545

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +GI+P+ +++N LI    K  R   A EL +EM  +   P   TYN +IN L +     
Sbjct: 546 EKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMH 605

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
               LL  +  + +  +++TY  L+  + ++    DA
Sbjct: 606 AALNLLEKLHNEDVHADIITYNILISWHCKARLLHDA 642



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 125/349 (35%), Gaps = 58/349 (16%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGE 420
            R  V P   +Y+ ++ A+A A        + + M       P +F +S         G 
Sbjct: 128 HRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGR 187

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 +L+ M   G  PDT  Y  +I        ++ A    D M   G   D  T+N 
Sbjct: 188 ADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFND 247

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG------ 534
           ++      GR   A  L + M  RG  P   TY  ++  L    + E+ + +LG      
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELN 307

Query: 535 -------------------------NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
                                     M ++G  P+  TY+ L+    + GR   A++   
Sbjct: 308 VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLR 367

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C  G+ D       VM   GL  +    N +I A  +D+
Sbjct: 368 EMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDR 427

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           R  +A   +Q MK  G KPD+ TY T++  L   ++  +  + YLF N+
Sbjct: 428 RMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEE--AEYLFENL 474



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 44/257 (17%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++ +LC++N   +  Y   + L  H    +  + Y+ LIHAL R+    +A  L+  
Sbjct: 451 YNTIIYHLCNNNQMEEAEYLFENLL--HEGVVANAITYNTLIHALLRNGSWQDAISLAND 508

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                  L  ++YN LI A  R+ ++++++ L+S+M + G   + ++Y+L+I  L +T +
Sbjct: 509 MVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRR 568

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +              D +EL  ++LN                          L+P   TY
Sbjct: 569 VR-------------DALELSKEMLNQ------------------------ELTPDIVTY 591

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G    A  + E+L    +      YN L+  + K   L DA  +++    
Sbjct: 592 NTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVT 651

Query: 364 SGVLPDEHTYSLLIDAY 380
           SG+ P+E T+ +++  +
Sbjct: 652 SGITPNERTWGIMVQNF 668


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 195/405 (48%), Gaps = 29/405 (7%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S+V+  L ++ ++D +  ++L  ++    + L+    N ++  + +  D  +    L + 
Sbjct: 135 SVVVDGLCKSGRVDDA--RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIM 192

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+     TY  ++ +LS +    + EA+F E+K + +      Y A++  Y + G +
Sbjct: 193 ENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 252

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  V+ E   +GV P+E TY +LI  +   G+ E+A ++L +M+      N  I++ +
Sbjct: 253 RRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 312

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  +G      ++   M+  GVE + + YN +                  RM   G+
Sbjct: 313 IDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTL-------------ACGLCRM---GV 356

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ +T+ TLI  H K G    A  LF EM E+G  P   TY++MI+   ++ R  + +R
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               M  +G +P+V TY +LV  +G          C+ G  D A+  F  M+  G +P+ 
Sbjct: 417 FRKEMEKKGFVPDVYTYASLV--HGH---------CVNGKVDVALKLFEEMKQRGTEPNV 465

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +A  +LI+   ++ R   AF +   M + GL PD   Y+ L+ +L
Sbjct: 466 VAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 510



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 23/391 (5%)

Query: 167 SILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S+++  L +S ++ +A  LL    R    L  L YN+L+    R  D  +   ++  M  
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G       Y++++ SL+    I  S ++ L+ E++ + +  D  L   VI  + +AG+ 
Sbjct: 195 EGIEATVGTYTILVDSLSTARDI--SKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNM 252

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A + L    G G+ P   TY  +I      G+   AE +  +++  G+      +N +
Sbjct: 253 RRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTM 312

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY + G + DA  + + ME+ GV  + +TY+ L       G                 
Sbjct: 313 IDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMG----------------V 356

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN   Y+ +++ +   G+     ++ +EM   G  P    Y+VMI  + K   +  A  
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
               M  +G  PD  T+ +L+  H   G+ D A +LFEEM++RG  P    Y  +I+ L 
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           ++ R E   +L  +M   GL+P+   Y+ LV
Sbjct: 477 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 150/309 (48%), Gaps = 26/309 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMR 220
           Y+IL+ +L  +  + +   L    +   +      Y A+I+A  R  ++ +A  ++ +  
Sbjct: 204 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 263

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG- 279
            +G   +   Y ++I+   +  +++++  + L  +++   + L+  + N +I G+ + G 
Sbjct: 264 GNGVEPNERTYGVLIKGFCKIGQMEAA--EMLLADMQGQGVGLNQIIFNTMIDGYCRKGM 321

Query: 280 --DASK---AMRFLG----------MAQGV---GLSPKTATYAAVITALSNSGRTIEAEA 321
             DA K   AM  +G          +A G+   G+ P   TY  +I+     G  +EA  
Sbjct: 322 VDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARR 381

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E+ E G  P    Y+ ++ GY K G +++AE    EME+ G +PD +TY+ L+  + 
Sbjct: 382 LFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHC 441

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G+ + A  + +EM+    +PN   Y+ +++G    G  +  FQ+  +M  +G+ PD  
Sbjct: 442 VNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDS 501

Query: 442 FYNVMIDTF 450
            Y+ ++ + 
Sbjct: 502 LYSALVGSL 510



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 16/124 (12%)

Query: 525 RWEDVKRLLGNMRAQGLLPNVVT---YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           R  D   LL   RA G  P  V+    + +VD   +SGR DDA   L+            
Sbjct: 110 RLADAAGLL--ERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDD----------- 156

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G+  + L  NSL++ +   + D     +L+ M+  G++  V TYT L+ +L     
Sbjct: 157 MPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARD 216

Query: 642 FHKV 645
             KV
Sbjct: 217 ISKV 220


>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
 gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
          Length = 647

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 198/416 (47%), Gaps = 55/416 (13%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           +I  +A++G A++AM  L   +G GL P T +Y AVI A    G  +      F ++ + 
Sbjct: 29  LISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQD 88

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P  K +N+LL    + G+L+DA  V  EM   G   D +TY+  +DA    G  E A
Sbjct: 89  GLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELA 148

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V+ +ME ++ KPN   YS ++ G+    ++    ++ ++MKS G++ D   YN ++  
Sbjct: 149 TQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTLLAI 208

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K           + M + GIE DT+T+N+LI+ + K GR D    L ++M+ +G  P 
Sbjct: 209 YVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPS 268

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY+ +I++  +     D   +  + +  GL  +VV +++ +D   ++G     +EC  
Sbjct: 269 VLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNG----LVECAL 324

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ------------------------ 605
            L D+ +         G+KP+ +  N++I+AFG+ +                        
Sbjct: 325 SLLDEMIKM-------GIKPNVVTYNTIIDAFGKSKILTEEDPGNMGIVGVYGGQIVRAT 377

Query: 606 ----------------RDAEAFAVL---QYMKENGLKPDVVTYTTLMKALIRVDKF 642
                           R  E F +L   Q M + G++P+VVT++ ++ A  R + F
Sbjct: 378 NPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNF 433



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 190/428 (44%), Gaps = 32/428 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARND-DLEKALNLMSKM 219
           +S LI A  RS    EA  + +       R T ++YNA+I AC +   DL   L    +M
Sbjct: 26  HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 85

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            QDG   D   ++ ++ + +R   ++ +  + ++ E+       D    N  +    K G
Sbjct: 86  LQDGLCPDRKTFNSLLAACSRAGHLEDA--RTVFDEMIHLGSGRDIYTYNTFVDAICKCG 143

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +   A + +   +   + P   TY+ ++   S   +  EA  + E++K  G++     YN
Sbjct: 144 NMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYN 203

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  YVK G   +   V  +ME  G+  D  TY+ LI+ Y   GR +    ++++M   
Sbjct: 204 TLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 263

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   YS ++  Y   G     F V  + K SG++ D   ++  IDT  K   +  A
Sbjct: 264 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECA 323

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-- 517
           ++  D M+  GI+P+ +T+NT+ID       + +++ L EE  + G       Y   I  
Sbjct: 324 LSLLDEMIKMGIKPNVVTYNTIIDA------FGKSKILTEE--DPGNMGIVGVYGGQIVR 375

Query: 518 --NLLGEQER-WEDVK-----------RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
             N +    R   DV+            L   M  QG+ PNVVT++ +++   +   F+D
Sbjct: 376 ATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFED 435

Query: 564 AIECLEGL 571
           A   LE L
Sbjct: 436 AALLLEQL 443



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 137/282 (48%), Gaps = 14/282 (4%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG-EWQRTFQVLKEM 431
           +S LI AYA +G    A  VL+ M+ +  +P +  Y+ ++      G + + T    ++M
Sbjct: 26  HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 85

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ PD   +N ++    +   L  A   FD M+  G   D  T+NT +D   KCG  
Sbjct: 86  LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNM 145

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A ++  +M+     P   TY+ +++   + E++++  +L   M++ G+  + V Y TL
Sbjct: 146 ELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVCYNTL 205

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR-DAEA 610
           + IY ++G++D+     E            M   G++   +  NSLIN +G+  R D  A
Sbjct: 206 LAIYVKTGKYDEIATVCED-----------MENLGIEKDTVTYNSLINGYGKQGRLDMVA 254

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           F V Q M+  G+ P V+TY+TL+    +       F+ YL F
Sbjct: 255 FLV-QDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 295


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 223/483 (46%), Gaps = 22/483 (4%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR+++ ++    L+     +   + NAL++A  R  + ++   L+++M++     + + +
Sbjct: 284 GRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTF 343

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDK-----IELDGQLLNDVIVGFAKAGDASKAMR 286
            ++I  L +  ++D +L  ++++++   +     +E D    N +I G  K G   + + 
Sbjct: 344 GILINHLCKFRRVDEAL--EVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401

Query: 287 FL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
            +  M       P T TY  +I     +     A  +F+++ + G+ P     N L+ G 
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K G +  A    +EM+  G+  +  TY+ LI A+ N    E A  +  EM  +   P++
Sbjct: 462 CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDA 521

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y  +++G    G+  R   VL +MK +G  PD   +NV+I+ F + N L  A      
Sbjct: 522 IVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKE 581

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M + GI+PD +T+NTLI    K G +  A  L ++M + G  P   TY  +I+       
Sbjct: 582 MENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN 641

Query: 526 WEDVKRLLGNMRAQGLL-PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
            ++  ++  +M +   + PN V Y  L++   +  + D A+  ++            M+ 
Sbjct: 642 LDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD-----------MKV 690

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G+KP+    N++     E    ++AF ++  M E+   PD +T   L + L  V +  K
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750

Query: 645 VFS 647
           + S
Sbjct: 751 LKS 753



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/558 (24%), Positives = 232/558 (41%), Gaps = 81/558 (14%)

Query: 167 SILIHALGRSEKLYEAFL----LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQD 222
           ++LI   GR++ + E+FL    L   +RLT +  N LI    R   ++ AL+L+ +M Q 
Sbjct: 163 TLLIRCFGRAQMVDESFLVYNELCPSRRLTHIR-NILIDVLFRKGRVDDALHLLDEMLQP 221

Query: 223 GYHCDFINYS----LVIQSLTRTNKI----DSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
               +F   S    +V  +L++ +K+    D   +  L  +    ++  +   L  +I  
Sbjct: 222 --KAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISR 279

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             ++G   +A   L     +G   + A+  A++TAL  +        +  E+KE  ++P 
Sbjct: 280 LCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPN 339

Query: 335 TK----------------------------------------AYNALLKGYVKMGYLKDA 354
                                                      YN L+ G  K+G  ++ 
Sbjct: 340 VVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEG 399

Query: 355 EFVVSEME-RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
             +V  M  +   +P+  TY+ LID Y  A   E+AR +  +M      PN    + ++ 
Sbjct: 400 LGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVD 459

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    G      +   EM+  G++ +   Y  +I  F   N +  AM  FD ML  G  P
Sbjct: 460 GMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSP 519

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D I + TLI    + G+ DRA  +  +M+E G+ P   ++N++IN    + + ++   +L
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M   G+ P+ VTY TL+  + ++G F  A                          CL 
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639

Query: 570 GLSDQAVNAFRVM-RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           G  D+A+  FR M  T  + P+ +  N LIN+     +   A +++  MK  G+KP+  T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699

Query: 629 YTTLMKALIRVDKFHKVF 646
           +  + K L   +   K F
Sbjct: 700 FNAMFKGLQEKNWLSKAF 717



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 35/350 (10%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM--ERSGVLPDEHTYSL 375
           E+  V+ EL  S  +  T   N L+    + G + DA  ++ EM   ++   P+ +T  +
Sbjct: 177 ESFLVYNELCPS--RRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHI 234

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAK--------PNSFIYSRILAGYRDRGEWQRTFQV 427
           +  A +   R +  R V +E  V            PNS   +++++     G   R + V
Sbjct: 235 VFSALSK--RDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDV 292

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CH 485
           L  +   G   +    N ++   G+             M    I+P+ +T+  LI+  C 
Sbjct: 293 LHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCK 352

Query: 486 FKCGRYDRAEELFEEM---QERGYF--PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           F+  R D A E+FE+M   +  G+   P   TYN +I+ L +  R E+   L+  MR+Q 
Sbjct: 353 FR--RVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQP 410

Query: 541 -LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
             +PN VTY  L+D Y           C   + + A   F  M  DG+ P+ + LN+L++
Sbjct: 411 RCMPNTVTYNCLIDGY-----------CKASMIEAARELFDQMNKDGVPPNVVTLNTLVD 459

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              +  R   A      M+  GLK + VTYT L++A   V+   K    +
Sbjct: 460 GMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELF 509



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 43/275 (15%)

Query: 166 YSILIHA---LGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A   +   EK  E F  +L        + Y  LIS  ++   L++A  ++SKM+
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D ++++++I    R NK+D +   ++ KE+E   I+ DG   N +I  F+K GD
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAY--EMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF----------------- 323
            S A R +      GL P   TY A+I A   +G   EA  +F                 
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 324 -------------------EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
                              +++K  G+KP T  +NA+ KG  +  +L  A  ++  M   
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
              PD  T  +L +  +  G     +  ++  EVS
Sbjct: 727 ACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVS 761


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 62/532 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+ L ++ +L  AF L ++  +  +     TY ALI+   + +  +K  +++ +M 
Sbjct: 281 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI 340

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--------------LYKEIE--C--DKIE 262
             G++ + + ++ +I    +   I+ +L  K              LY  ++  C  D+IE
Sbjct: 341 GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 400

Query: 263 LDGQLLNDVIVG---------------FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                L +++                   K      A RF  M       P       ++
Sbjct: 401 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 460

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L   G+ +EA  ++  L E G        NAL+ G    G L +A  +V EM   G+ 
Sbjct: 461 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 520

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            D  TY+ LI  + N G+ E    + +EM     +P+ + Y+ +L G  + G+     ++
Sbjct: 521 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 580

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             E K+SG+  + H Y +M++ + K N +      F+ +LS+ +E ++I +N +I  H +
Sbjct: 581 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 640

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G    A +L E M+ +G  P   TY+ +I+ +      ED K L+  MR +G +PNVV 
Sbjct: 641 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 700

Query: 548 YTTLVDIYGQSGRFDDA----IE--------------------CLEGLSDQAVNAFRVMR 583
           YT L+  Y + G+ D A    +E                    C  G  ++A N    M+
Sbjct: 701 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 760

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             G+ P  +  N L N F +      AF V   M   GL  D +TYTTL+  
Sbjct: 761 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 11/333 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G   AG   +A R +      GL     TY A+I    N G+      + EE+ +
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G++P    YN LL+G   +G L DA  +  E + SG++ + HTY ++++ Y  A R E 
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +  E+     + NS +Y+ I+  +   G      Q+L+ MKS G+ P+   Y+ +I 
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 671

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                  +  A    D M  EG  P+ + +  LI  + K G+ D AE  + EM      P
Sbjct: 672 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY +MI+   +    E    LL  M+  G++P+VVTY  L + + ++   D+A +  
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK-- 789

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             + DQ       M T+GL    +   +L++ +
Sbjct: 790 --VCDQ-------MATEGLPVDEITYTTLVHGW 813



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 19/422 (4%)

Query: 133 LKNLCSSNSSI--DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR 190
           L+ + SS  SI  D  Y+VV WL K    + Y        H+  R  K+    +LS+  R
Sbjct: 406 LEEILSSGLSIHPDNCYSVVHWLCKK---FRY--------HSAFRFTKM----MLSRNFR 450

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
            + L    L+    ++    +A  L  ++ + G     +  + +I  L    K+  +   
Sbjct: 451 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA--S 508

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE+    + +D    N +I+GF   G      R        G+ P   TY  ++  L
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 568

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            N G+  +A  +++E K SGL      Y  +++GY K   ++D E + +E+    +  + 
Sbjct: 569 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+++I A+   G   +A  +L+ M+     PN   YS ++ G  + G  +    ++ E
Sbjct: 629 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 688

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+  G  P+   Y  +I  + K   +  A + +  M+S  I P+  T+  +ID + K G 
Sbjct: 689 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 748

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            ++A  L  +M+E G  P   TYN++ N   +    ++  ++   M  +GL  + +TYTT
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 808

Query: 551 LV 552
           LV
Sbjct: 809 LV 810



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 213/503 (42%), Gaps = 31/503 (6%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ +I+AL   G+ E   E F+  ++  ++P  +TYN +I+   +N  L+ A  L  KM 
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y  +I  L + N  D   +  +  E+       +  + N++I G+ K G+
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDK--VNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++   +     ++P + T  +++     S +   AE   EE+  SGL        +
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 423

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RIVLKE 395
           ++    K      A      M      P +   ++L+      G+   A     R++ K 
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
              S    N+ I+     G    G+     +++KEM   G+  D   YN +I  F     
Sbjct: 484 SPASKVTSNALIH-----GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 538

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +       + M   GI+PD  T+N L+      G+ D A +L++E +  G      TY I
Sbjct: 539 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           M+    +  R EDV+ L   + ++ +  N + Y  ++  + Q+G    A++ LE      
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN----- 653

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M++ G+ P+    +SLI+         +A  ++  M++ G  P+VV YT L+  
Sbjct: 654 ------MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 707

Query: 636 LIRVDKFHKVFSSYL---FFNIY 655
             ++ +     S++L    FNI+
Sbjct: 708 YCKLGQMDTAESTWLEMISFNIH 730



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 114/497 (22%), Positives = 199/497 (40%), Gaps = 77/497 (15%)

Query: 217 SKMRQDGYHCDFINYSLVIQ-----SLTRTNKIDSSLLQ--KLYKEIECDKIELDGQL-- 267
           ++ R  G+ C    + L+ +     SL   N + SSL++  +  K  E  ++  +G    
Sbjct: 183 TQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGACPD 242

Query: 268 ---LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
                +VI    K G    A+      + +G+SP   TY  +I  L  +GR   A  + E
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 302

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++   G++P  K Y AL+ G +K+ +      V+ EM  SG  P+   ++ LID Y   G
Sbjct: 303 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMG 362

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG--VEPDTHF 442
             E A  +   M   +  P S     ++ G+    + +     L+E+ SSG  + PD + 
Sbjct: 363 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD-NC 421

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRM------------------------------------ 466
           Y+V+     K+   +H+   F +M                                    
Sbjct: 422 YSVVHWLCKKFR--YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L +G     +T N LI      G+   A  + +EM ERG      TYN +I     + + 
Sbjct: 480 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 539

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
           E   RL   M  +G+ P++ TY  L+      G+ DDAI+                    
Sbjct: 540 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 599

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C     +   N F  + +  ++ +++  N +I A  ++   A A  +L+ MK  G+
Sbjct: 600 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 659

Query: 623 KPDVVTYTTLMKALIRV 639
            P+  TY++L+  +  +
Sbjct: 660 LPNCATYSSLIHGVCNI 676



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 21/159 (13%)

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQER------WEDVKRLLGNMRAQGLLPNVVT 547
           A  LF      G F  T  ++++I++   Q R        DV  LL     +G  P++ T
Sbjct: 155 ANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLAR---KGTFPSLKT 211

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
              L+    ++  F+   E            FRVM ++G  P   +  ++INA  +  + 
Sbjct: 212 CNFLLSSLVKANEFEKCCE-----------VFRVM-SEGACPDVFSFTNVINALCKGGKM 259

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             A  +   M++ G+ P+VVTY  ++  L +  +    F
Sbjct: 260 ENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAF 298


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 208/442 (47%), Gaps = 15/442 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL----LQK 251
           Y +LI A A   D+E+AL+ + KM+++G     + YS+V+    +    D S      + 
Sbjct: 340 YTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAES 399

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +E+E + I+    + + ++ G+   G+  K +      +  G +P   +Y  +I   +
Sbjct: 400 LVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYT 459

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G+  +A  V + ++ +G+K   K Y+ L+ G++K+    +A  V  ++ + G+ PD  
Sbjct: 460 KMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVV 519

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ +I A+   G  + A  ++KEM+    +P S  +  I+ G+   GE +R  ++   M
Sbjct: 520 LYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMM 579

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           + SG  P  H +N ++    +   +  A+   D M   G+ PD  T+ T+++ +   G  
Sbjct: 580 RRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDT 639

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
            +A E F +++  G      TY  ++    +  R +    +   M AQ +  N   Y  L
Sbjct: 640 GKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNIL 699

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D + + G   D  E        A +  + M+ +G++P      S INA  +      A 
Sbjct: 700 IDGWARRG---DVWE--------AADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRAT 748

Query: 612 AVLQYMKENGLKPDVVTYTTLM 633
             +Q M+  G+KP+V TYTTL+
Sbjct: 749 KTIQEMEALGVKPNVKTYTTLI 770



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 187/415 (45%), Gaps = 6/415 (1%)

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSIL--IHALGRSEKLYEAFLLSQRQRLTP--LTYN 197
           ++D A ++V  +++  +    ++ ++++     +G  EK    F   +     P  ++Y 
Sbjct: 393 NMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYG 452

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI+   +   + KAL +   M   G   +   YS++I    +     ++    +++++ 
Sbjct: 453 CLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFT--VFEDVI 510

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
            D ++ D  L N++I  F   G+  +A+  +   Q     P + T+  +I   + +G   
Sbjct: 511 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMR 570

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A  +F+ ++ SG  P    +NAL+ G V+   ++ A  ++ EM  +GV PDEHTY+ ++
Sbjct: 571 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIM 630

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + YA  G    A     ++     + + F Y  +L      G  Q    V +EM +  + 
Sbjct: 631 NGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIP 690

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            +T  YN++ID + +   +  A     +M  EG++PD  T+ + I+   K G   RA + 
Sbjct: 691 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKT 750

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            +EM+  G  P   TY  +I+        E   R    M+  GL P+   Y  L+
Sbjct: 751 IQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLM 805



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 175/384 (45%), Gaps = 18/384 (4%)

Query: 271 VIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++VG+ A+ GD  +A +     +  G+ P +  Y ++I A +      EA +   ++KE 
Sbjct: 307 LMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEE 366

Query: 330 GLKPRTKAYNALLKGYVKMG------YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           G++     Y+ ++ G+ K+G       +  AE +V EME  G+      Y  +++ Y   
Sbjct: 367 GVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMI 426

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G  E   IV K ++     P+   Y  ++  Y   G+  +  +V K M+S+G++ +   Y
Sbjct: 427 GNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTY 486

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +++I+ F K     +A   F+ ++ +G++PD + +N +I      G  DRA  + +EMQ+
Sbjct: 487 SMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK 546

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           + + P + T+  +I+             +   MR  G +P V T+  LV    +  + + 
Sbjct: 547 KRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEK 606

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E L+            M   G+ P      +++N +       +AF     ++  GL+
Sbjct: 607 AVEILDE-----------MALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLE 655

Query: 624 PDVVTYTTLMKALIRVDKFHKVFS 647
            DV TY  L+KA  +  +     +
Sbjct: 656 LDVFTYEALLKACCKSGRMQSALA 679



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 151/359 (42%), Gaps = 34/359 (9%)

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
           + FE +K    KP  + +  ++  Y + G +  A      M   G+ P  H Y+ LI AY
Sbjct: 292 SAFERIK----KPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAY 347

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE------WQRTFQVLKEMKSS 434
           A     E A   +++M+    + +   YS ++ G+   G         R   +++EM+  
Sbjct: 348 AVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEE 407

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++     Y+ M++ +         +  F R+   G  P  I++  LI+ + K G+  +A
Sbjct: 408 GIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKA 467

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+ + M+  G      TY+++IN   + + W +   +  ++   GL P+VV Y  ++  
Sbjct: 468 LEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKA 527

Query: 555 YGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPS 590
           +   G  D AI  ++                        G   +A+  F +MR  G  P+
Sbjct: 528 FCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPT 587

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
               N+L+    E ++  +A  +L  M   G+ PD  TYTT+M     +    K F  +
Sbjct: 588 VHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYF 646



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 128/296 (43%), Gaps = 9/296 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---YEAFL 184
           L+++++K  C    ++D A  +V  +QK     +      I IH   R+ ++    E F 
Sbjct: 520 LYNNIIKAFCGM-GNMDRAIHMVKEMQKKRHRPTSRTFMPI-IHGFARAGEMRRALEIFD 577

Query: 185 LSQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           + +R    P   T+NAL+        +EKA+ ++ +M   G   D   Y+ ++       
Sbjct: 578 MMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALG 637

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
             D+    + + ++  + +ELD      ++    K+G    A+          +   T  
Sbjct: 638 --DTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFV 695

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I   +  G   EA  + +++K+ G++P    Y + +    K G +  A   + EME
Sbjct: 696 YNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEME 755

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             GV P+  TY+ LI  +A A   E A    +EM+++  KP+  +Y  ++     R
Sbjct: 756 ALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSR 811


>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
 gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
          Length = 425

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQK 251
           L  NA+I+A  R+  + K ++   ++ + G   +   Y  VIQSL +   +     LL K
Sbjct: 15  LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDK 74

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + K      +E D  L N V+ G  KA    +A +     + +G      TYA +I +L 
Sbjct: 75  MIKT----GLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLG 130

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              R  EA  +F+E++E G  P   AY  ++  Y K G ++ A  V+ +M    + PD++
Sbjct: 131 RCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDY 190

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T + LI A +  GR E A  + + M+ S    N+  ++ +L      G+    +Q + EM
Sbjct: 191 TLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEM 250

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           ++ G++P++  +N +I+  G+      A      M S G+ PD  T+  +I+   K G  
Sbjct: 251 EARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNM 310

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
            +A E+F +M++ G      TYN++I+ L +  R++D + +  +M+ +G+LP+ +T T L
Sbjct: 311 GKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370

Query: 552 VDIYGQ 557
             + G+
Sbjct: 371 QQLAGK 376



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N VI  + ++    K M         G  P   TY  VI +L  +G  + A  + +++ +
Sbjct: 18  NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIK 77

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +GL+P T   N +L G  K   + +A  + + M+  G   D++TY++LI +     R E 
Sbjct: 78  TGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEE 137

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++  EME     P++  Y+ ++  Y   G  +    VLK+M    + PD +  N +I 
Sbjct: 138 ATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLIT 197

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +      A   F+RM   G+  +T+++N ++DC  K G+   A +  +EM+ RG  P
Sbjct: 198 AVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKP 257

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            + T+N +IN LG  +   +  ++L  MR+ GL P+V TYT +++ + ++G    A E  
Sbjct: 258 NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFE-- 315

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M   G   + +  N LI+A  +  R  +A  +   MK+ G+ PD +T
Sbjct: 316 ---------MFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366

Query: 629 YTTLMK 634
            T L +
Sbjct: 367 ATVLQQ 372



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 19/355 (5%)

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           AVI A   S R  +    F+EL + G KP    Y  +++  VK G +  A  ++ +M ++
Sbjct: 19  AVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDKMIKT 78

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD    ++++D    A   + A  +   M+      + + Y+ ++   R  G  +R 
Sbjct: 79  GLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILI---RSLGRCKRD 135

Query: 425 FQ---VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            +   +  EM+  G  P    Y  +ID + K   +  AM    +ML + + PD  T N+L
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    + GR + A E+FE M++ G    T ++N M++  G+  +     + +  M A+G+
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGI 255

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN +T+ TL++  G++             + +A    + MR+ GL P       +I AF
Sbjct: 256 KPNSITFNTLINCLGRAK-----------YASEAYKVLQEMRSAGLTPDVFTYTCMIEAF 304

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
            +     +AF +   M++ G   +VVTY  L+ AL++  ++    +  ++F++ K
Sbjct: 305 AKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQD--ARDIYFDMKK 357



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 2/295 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L  N ++    + + +++A  L + M+  G   D   Y+++I+SL R  + + + L  L+
Sbjct: 85  LLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATL--LF 142

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+E            +VI  + KAG    AM  L       L+P   T  ++ITA+S +
Sbjct: 143 DEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRT 202

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GRT  A  +FE +K+SG+   T ++NA+L    K G +  A   + EME  G+ P+  T+
Sbjct: 203 GRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITF 262

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+    A     A  VL+EM  +   P+ F Y+ ++  +   G   + F++  +M+ 
Sbjct: 263 NTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEK 322

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +G   +   YN++ID   K      A   +  M  +GI PD IT   L     KC
Sbjct: 323 AGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKC 377



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 126/303 (41%), Gaps = 59/303 (19%)

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            + + ++A Y       +     +E+   G +P+ + Y  +I +  K   +  AM   D+
Sbjct: 15  LVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLDK 74

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M+  G+EPDT+  N ++D   K    D A +LF  M+  G      TY I+I  LG  +R
Sbjct: 75  MIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKR 134

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ----------- 574
            E+   L   M  +G  P+   YT ++DIY ++GR + A+  L+ + D+           
Sbjct: 135 DEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNS 194

Query: 575 -------------AVNAFRVMRTDG----------------------------------- 586
                        A   F  M+  G                                   
Sbjct: 195 LITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +KP+++  N+LIN  G  +  +EA+ VLQ M+  GL PDV TYT +++A  +     K F
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314

Query: 647 SSY 649
             +
Sbjct: 315 EMF 317



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 126/253 (49%), Gaps = 7/253 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKAL 213
           C + +  Y+ILI +LGR ++  EA LL    + +  TP    Y  +I    +   +E A+
Sbjct: 115 CPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAM 174

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++ KM       D    + +I +++RT +  + L  ++++ ++   + ++    N ++ 
Sbjct: 175 VVLKKMLDKNLAPDDYTLNSLITAVSRTGR--TELACEIFERMKKSGVAVNTVSFNAMLD 232

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
              KAG    A +F+   +  G+ P + T+  +I  L  +    EA  V +E++ +GL P
Sbjct: 233 CCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTP 292

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  +++ + K G +  A  +  +ME++G   +  TY+LLIDA   AGR++ AR + 
Sbjct: 293 DVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIY 352

Query: 394 KEMEVSHAKPNSF 406
            +M+     P++ 
Sbjct: 353 FDMKKKGILPDAI 365



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 101 SALASSPSSLNRVEF------KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ 154
           ++L ++ S   R E       ++ +S  AV    ++++L + C     + LAY  +  ++
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAML-DCCGKAGKVGLAYQFMDEME 251

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDL 209
              +     + ++ LI+ LGR++   EA+ + Q  R   LTP   TY  +I A A+  ++
Sbjct: 252 ARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNM 310

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            KA  +   M + G   + + Y+L+I +L +  +
Sbjct: 311 GKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 231/493 (46%), Gaps = 28/493 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           ++ L+ A+ + ++ ++   L +R  L  L     T N LI+     + ++  L ++ +M 
Sbjct: 95  FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + G+  + + ++ +++ L   ++I   + LL+K+ +      +   G LLN    G    
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLN----GLCMT 210

Query: 279 GDASKAMRFL------GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           G+   A++            GV + P    Y  +I +L   G   + + +F E+K  G+ 
Sbjct: 211 GNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGIS 270

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   AY++++ G    G  + A+ + +EM   GV P+  T+++LIDA   AG+ E A  +
Sbjct: 271 PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL 330

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           LK M      P++F Y+ ++ G+   G       +   M+S G+E D   YNV+I+ + K
Sbjct: 331 LKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCK 390

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A   +  M+ + I P  IT+NTL+   F+ G+   A  LF EM+     P + T
Sbjct: 391 SGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCT 450

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YNI+++ L +     +   L   +      P++  +  L+D   ++ + + A E    LS
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +           GL+P+ +    +I+   +  +   A  +   M+E G  P++VT+ TL
Sbjct: 511 HE-----------GLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTL 559

Query: 633 MKALIRVDKFHKV 645
           M+   + D+  KV
Sbjct: 560 MRGFCQNDEMQKV 572



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 205/454 (45%), Gaps = 15/454 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-- 189
           L+   C+ N  +D   AV+  + +     +  + ++ L+  L    ++ EA  L ++   
Sbjct: 133 LINCYCNLNK-VDFGLAVLGEMLRRGHSPN-TVTFTSLVKGLCLGSRISEATGLLRKMVR 190

Query: 190 ---RLTPLTYNALISACARNDDLEKALNLMSKM--RQDGYHC----DFINYSLVIQSLTR 240
              R   +TY  L++      +   A+ L  +M     G+      + + Y  +I SL +
Sbjct: 191 MGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCK 250

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
              ID    ++L+ E++   I  D    + +I G    G    A          G+ P  
Sbjct: 251 DGLIDKG--KELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            T+  +I AL  +G+  EA  + + + + G  P T  YN L+ G+   G + DA  +   
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ME  G+  D  +Y++LI+ Y  +GR   A+ + +EM      P    Y+ +L G    G+
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +  + +  EMK   + P++  YN+++D   K N L  AM  F  + +   +P    +N 
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LID   K  + + A ELF  +   G  P   TY +MI+ L +  + E+ K L   M  +G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
             PN+VT+ TL+  + Q+      +E L+ ++++
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEK 582



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 232/521 (44%), Gaps = 30/521 (5%)

Query: 73  DVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLA---ESYRAVPAP-- 127
           DV+SL K+        +F++ N        L +   +LN+V+F LA   E  R   +P  
Sbjct: 110 DVISLYKRMSLIGLAPDFITLN-------ILINCYCNLNKVDFGLAVLGEMLRRGHSPNT 162

Query: 128 -LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSE------KL 179
             + SL+K LC   S I  A  ++  + +  + Y   ++ Y  L++ L  +       KL
Sbjct: 163 VTFTSLVKGLCLG-SRISEATGLLRKMVR--MGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219

Query: 180 YEAFL-----LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
           +E  L          +   + Y  +I +  ++  ++K   L  +M+  G   D + YS +
Sbjct: 220 HEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSI 279

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I  +  T + + +  + L+ E+  + +  +    N +I    KAG   +A   L +    
Sbjct: 280 IHGMCHTGRWEGA--KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G SP T TY  +I      GR  +A  +F  ++  G++    +YN L+ GY K G + +A
Sbjct: 338 GESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEA 397

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +  EM    ++P   TY+ L+      G+   A  +  EM+V    P S  Y+ +L G
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG 457

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                      ++   +++   +P    +N +ID   K   +  A   F+R+  EG+EP+
Sbjct: 458 LCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPN 517

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT+  +I    K G+ + A++LF  M+E+G  P   T+N ++    + +  + V  LL 
Sbjct: 518 VITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQ 577

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            M  +   P+  T + +VD+  +  ++ + +  L     Q 
Sbjct: 578 EMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 17/359 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P  +++  ++ A++   R  +  ++++ +   GL P     N L+  Y  +  +     
Sbjct: 89  TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           V+ EM R G  P+  T++ L+       R   A  +L++M     +PN   Y  +L G  
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 417 DRGEWQRTFQVLKEMKSSG------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
             G      ++ +EM +        ++P+   Y  +ID+  K   +      F  M   G
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I PD + ++++I      GR++ A+ LF EM + G  P   T+N++I+ L +  + E+  
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  M  +G  P+  TY TL+D +           CLEG  D A + F  M + G++  
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGF-----------CLEGRIDDARDLFVSMESKGIETD 377

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            ++ N LIN + +  R  EA  + + M    + P V+TY TL+  L R  K    ++ +
Sbjct: 378 AVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLF 436



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 33/270 (12%)

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
           +F+ S   +G+  R E    F  L +M+ +   P    +N ++    K       ++ + 
Sbjct: 60  NFLKSNCKSGHIKRSEAFSVFNHLIDMQPT---PPISSFNTLLGAVAKIKRYFDVISLYK 116

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           RM   G+ PD IT N LI+C+    + D    +  EM  RG+ P T T+  ++  L    
Sbjct: 117 RMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGS 176

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVD-----------------IYGQSGRFDDAIE- 566
           R  +   LL  M   G  PNVVTY TL++                 +   +G F   I+ 
Sbjct: 177 RISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKP 236

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +GL D+    F  M+  G+ P  +A +S+I+      R   A  + 
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             M + G+ P+VVT+  L+ AL +  K  +
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 214/473 (45%), Gaps = 52/473 (10%)

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIEC 258
           S C R+  ++ A +++    + G   + + ++ ++  L   NK+  +  L +KL +E  C
Sbjct: 106 SYCLRHR-IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
           +  E+   +   V+ G +K G   K +  L + +     P   TY+ VI AL        
Sbjct: 165 EPNEV---MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +  E+K+  + P    YN+L+ G  K+G  +  + ++SEM    + P+ HT+S+LID
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                G+ E A  V++ M     +P+   YS I+ GY  RG+  R  +V   ++  G++P
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   Y+++I+ + K   L  AM  F  +  +G++PDT+T++T++    + GR   A+++F
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIF 401

Query: 499 EEMQERGYFP--C---------------------------------TTTYNIMINLLGEQ 523
           +EM   G  P  C                                  + Y ++IN L + 
Sbjct: 402 DEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN 461

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
           +R  +   +   + + GL+P+V TY  ++  +           C EGL D+     R M 
Sbjct: 462 DRVREAHAIFEKLPSIGLIPDVRTYNVMITGF-----------CREGLFDEVKGILRKME 510

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +G   +N+  N ++  F    + +E  + ++ M   G   D  T   L+  L
Sbjct: 511 DNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/445 (23%), Positives = 210/445 (47%), Gaps = 14/445 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +++LL  L + N   D A  +   L +  +C   E++Y  +++ L   G +EK      +
Sbjct: 135 FNTLLGGLFAENKVTD-AVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRI 193

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            ++    P   TY+ +I A  ++ +L+ A+NL+++M+Q     +   Y+ +I  L +  +
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKT 300
            +   ++ L  E+    I  +    + +I G  K G   DA + MR + + +GV   P  
Sbjct: 254 WEK--VKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKGV--EPDI 308

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY+A++      G+   A  VF  L++ G+KP   +Y+ L+ GY K   L  A  +  E
Sbjct: 309 ITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE 368

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           + + G+ PD  TYS ++      GR   A+ +  EM      P+  ++S +L GY   G 
Sbjct: 369 ISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGL 428

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +    +  +++ +  + +  FY V+I+   K + +  A A F+++ S G+ PD  T+N 
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I    + G +D  + +  +M++ G      TYN+++       +  ++   +  M  +G
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAI 565
              +  T   L+++  ++    D I
Sbjct: 549 FSFDATTTGVLINVLKENPSIVDMI 573



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 173/357 (48%), Gaps = 15/357 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    ++ +   + N        ++F E++  G+       N +   Y     +  A  V
Sbjct: 60  PSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSV 119

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYSRILAGYR 416
           +    ++G+  +  T++ L+       +   A ++ K++      +PN  +Y  ++ G  
Sbjct: 120 LPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLS 179

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
            RG  ++T  +L+ M+    +PD   Y+++ID   K   L  A+   + M  + I P+  
Sbjct: 180 KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF 239

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N+LID   K G++++ + L  EM      P   T++I+I+ L ++ + ED   ++ +M
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             +G+ P+++TY+ ++D Y           CL G  D+A   F V+R  G+KP+  + + 
Sbjct: 300 IEKGVEPDIITYSAIMDGY-----------CLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYL 650
           LIN + + +  A+A  +   + + GLKPD VTY+T++  LI V +     K+F   L
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 25/216 (11%)

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           CL  A++ F RM+     P  I ++ L         Y     LF EM+  G     +  N
Sbjct: 42  CLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILN 101

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------- 565
           I+ N    + R +    +L      G+  NVVT+ TL+       +  DA+         
Sbjct: 102 IVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161

Query: 566 -----------ECLEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                        + GLS     ++ ++  R+M     KP     + +I+A  +D     
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           A  +L  MK+  + P++ TY +L+  L ++ ++ KV
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKV 257


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 163/613 (26%), Positives = 261/613 (42%), Gaps = 78/613 (12%)

Query: 101 SALASSPSSLNRVEFKLAESYRAV---PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           SALA SPS+  +       S  A+   P     +LL +   S  ++  A + +S +Q   
Sbjct: 180 SALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFG 239

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKA 212
           L     + Y+ L++A  R   L EA  L  R +      T  TYN L+SA AR   +++A
Sbjct: 240 LSPD-AVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQA 298

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE--------------- 257
            +++  M   G+  D   Y+++   L +  K+D +   KL  E+E               
Sbjct: 299 TDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF--KLKDEMEQLGIVSPDVVTYNTL 356

Query: 258 ---CDKIELDGQLLN-----------------DVIV-GFAKAGDASKAMRFLGMAQGVGL 296
              C K +     LN                 ++IV G  + G   +A+  L M    GL
Sbjct: 357 VDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGL 416

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   TY  +I A   +G   +A  + +E+  SGLK  T   N LL    K    ++AE 
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++    + G +PDE +Y  ++ AY    + E A  +  EM      P+   Y+ ++ G  
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLS 536

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+       L E+   G+ PD   YN++I  + K   L  A    ++M+    +PD +
Sbjct: 537 TMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVV 596

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T NTL++     GR ++A +LFE   E+G      TYN +I  L +    +   R   +M
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD--------------QAVNAFRVM 582
             +GL P+V TY  L+    ++GR  +A + L  L++               +V A    
Sbjct: 657 EVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETG 716

Query: 583 RTDGLKPSNLALNSLINAFGEDQRD--------------AEAFAVLQYMKENGLKPDVVT 628
           +   +K     + S+ N  G+DQ                 EA AVL  M + G+  D  T
Sbjct: 717 KDPEVKSD---IESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNST 773

Query: 629 YTTLMKALIRVDK 641
           Y TLM+ LI+  K
Sbjct: 774 YITLMEGLIKRQK 786



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 189/401 (47%), Gaps = 30/401 (7%)

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  + A+  L   QG GLSP   TY  ++ A    G   EA  +   +K+ G+ P    Y
Sbjct: 223 GTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATY 282

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME- 397
           N L+  Y ++G++K A  VV  M   G  PD  TY++L      AG+ + A  +  EME 
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +    P+   Y+ ++              +L+EM+  GV+     +N+++    +   L 
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+   + M  EG+ PD IT+NTLID   K G   +A  L +EM   G    T T N ++
Sbjct: 403 EALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLL 462

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL--------- 568
             L +++R+E+ + LL     +G +P+ V+Y T++  Y +  + + A+ CL         
Sbjct: 463 YNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL-CLWDEMIKRKL 521

Query: 569 -----------EGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                      +GLS      +A++    +   GL P +   N +I+A+ ++    +AF 
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581

Query: 613 VLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
               M EN  KPDVVT  TLM  L    R++K  K+F S++
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 166/344 (48%), Gaps = 14/344 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAV--FEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           P      AV++AL+ S  T    ++  F  L    L P    +N L+  +   G L DA 
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 229

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
             +S+M+  G+ PD  TY+ L++A+   G    AR +L  M+     P    Y+ +++ Y
Sbjct: 230 STLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAY 289

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI-EPD 474
              G  ++   V++ M + G EPD   YNV+     +   +  A    D M   GI  PD
Sbjct: 290 ARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPD 349

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+NTL+D  FKC R   A  L EEM+E+G      T+NI++  L  + + E+    L 
Sbjct: 350 VVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +GL P+V+TY TL+D   ++G    A      L D+ V +       GLK     L
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFV----LMDEMVRS-------GLKMDTFTL 458

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           N+L+    +++R  EA  +L+   + G  PD V+Y T+M A  +
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFK 502


>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 863

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 222/504 (44%), Gaps = 87/504 (17%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    +K  E F  + SQ    +  +Y ALI+A  RN
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              E +L L+ +M+ D      + Y+ VI +  R   +D   L  L+ E+  +       
Sbjct: 190 GRYETSLELLDRMKNDKISPSILTYNTVINACARGG-LDWEGLLGLFAEMRHE------- 241

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                                       G+ P   TY  +++A +  G   EAE VF  +
Sbjct: 242 ----------------------------GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            + G+ P    Y+ L++ + K+  L+    ++SEM   G LPD  +Y++L++AYA +G  
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSI 333

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V  +M+ +   PN+  YS +L  +   G +    Q+  EMKSS  +PD   YN++
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ FG+       +  F  M+ E IEPD  T+  +I   F CG+    E           
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII---FACGKGGLHE----------- 439

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                                D +++L  M A  ++P+   YT +++ +GQ+        
Sbjct: 440 ---------------------DARKILQYMTANDIVPSSKAYTGVIEAFGQA-------- 470

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               L ++A+ AF  M   G  PS    +SL+ +F       E+ A+L  + ++G+  + 
Sbjct: 471 ---ALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527

Query: 627 VTYTTLMKALIRVDKFHKVFSSYL 650
            T+   ++A  +  KF +   +Y+
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYV 551



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 181/400 (45%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA  GD  +++R F  M + +   P    Y  +I+ L   G   +   VF
Sbjct: 105 LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+   G+     +Y AL+  Y + G  + +  ++  M+   + P   TY+ +I+A A  
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARG 224

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L+    RG       V + M   G+ PD   
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +++TFGK   L         M S G  PD  ++N L++ + K G    A  +F +MQ
Sbjct: 285 YSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TY++++NL G+  R++DV++L   M++    P+  TY  L++++G+ G F 
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404

Query: 563 DAI--------ECLE----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +        E +E                GL + A    + M  + + PS+ A   +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            AFG+     EA      M E G  P + TY +L+ +  R
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFAR 504



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 206/457 (45%), Gaps = 40/457 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           Y+ LI+A GR+ +   +  L  R    +++P  LTYN +I+ACAR   D E  L L ++M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC 258
           R +G   D + Y+ ++ +       D                     S L++   K    
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298

Query: 259 DKIE------LDGQLLNDV------IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +K+         G  L D+      +  +AK+G   +AM      Q  G +P   TY+ +
Sbjct: 299 EKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +     SGR  +   +F E+K S   P    YN L++ + + GY K+   +  +M    +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TY  +I A    G  E AR +L+ M  +   P+S  Y+ ++  +     ++    
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
               M   G  P    Y+ ++ +F +   +  + A   R++  GI  +  T+N  I+ + 
Sbjct: 479 AFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G+++ A + + +M++    P   T   ++++       ++ +     M+A  +LP+++
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598

Query: 547 TYTTLVDIYGQSGRFDDAIECLEG-LSDQAVNAFRVM 582
            Y  ++ +YG++ R+DD  E LE  LS++  N  +V+
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 170/395 (43%), Gaps = 15/395 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKL 179
           ++P    +++L    + + SI  A  V   +Q    C      YS+L++  G+S   + +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDV 371

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
            + FL  +     P   TYN LI         ++ + L   M ++    D   Y  +I +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             +    + +  +K+ + +  + I    +    VI  F +A    +A+        VG +
Sbjct: 432 CGKGGLHEDA--RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY +++ + +  G   E+EA+   L +SG+      +NA ++ Y + G  ++A   
Sbjct: 490 PSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +ME+S   PDE T   ++  Y+ A   +  R   +EM+ S   P+   Y  +LA Y  
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMI----DTFGKYNCLHHAMAAFDRMLSEGIEP 473
              W    ++L+EM S+ V         MI    D    +  + + +   D++ SEG   
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVL---DKLNSEGCGL 666

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               +N L+D  +  G+ +RA  +  E  +RG FP
Sbjct: 667 GIRFYNALLDALWWLGQKERAARVLNEATKRGLFP 701


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 219/493 (44%), Gaps = 23/493 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           SY+L+  IL+   G   ++       +LS+    T  T+  ++ A    ++++ A +L+ 
Sbjct: 185 SYDLVLEILVT--GNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLR 242

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + I Y  +I +L++ N++  +L  KL +E+       D Q  NDVI G  K
Sbjct: 243 DMTKHGCVPNSIVYQTLIHALSQKNQVSEAL--KLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                 A + +      G  P   TY  ++  L   G+  EA  +  ++      P    
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAI 356

Query: 338 YNALLKGYVKMGYLKDAE-FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            N L+ GYV  G LK+A+ F+   M   G  PD  TY++L+      G    AR ++ EM
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +PN   Y+ ++ G    G  +    VL EM + G+  ++  YN +I    +   +
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           H A+     M ++G +PD  T+N+LI    K  R D A  LF  M   G      TYN +
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ L  +  ++    L+ +M  +G   + +TY  L+  + + G  +  +E  E       
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQ------ 590

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M  DGL    ++ N +IN   +  +   AF  L+     G  PD+VTY +++  L
Sbjct: 591 -----MIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 637 IRVDKFHKVFSSY 649
            +V +  +  + +
Sbjct: 646 CKVGRIKEALNLF 658



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 224/524 (42%), Gaps = 60/524 (11%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           ++K LC  N  +D A +++  + KH  C    ++Y  LIHAL +  ++ EA  L +   +
Sbjct: 224 VMKALCMFNE-VDSACSLLRDMTKHG-CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
                   T+N +I    + + +  A  L+ +M   G++ D + Y  ++  L R  K++ 
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNE 341

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ-GVGLSPKTATYAA 305
           +  +K+  +I C     +  +LN +I G+  +G   +A  FL       G  P   TY  
Sbjct: 342 A--RKILIKIPCP----NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G    A  +  E+   G +P    Y  L+ G  K G L++A  V+ EM   G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG----------Y 415
           +  +   Y+ LI A     +   A  +L EM     KP+ F Y+ ++ G          +
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515

Query: 416 R-------------------------DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           R                          RG +Q+   ++ +M   G   D   YN +I  F
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +   +  +++M+ +G+  DTI+ N +I+   K G+ D A E   +   RG+ P  
Sbjct: 576 CKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDI 635

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN ++N L +  R ++   L   ++ +G+ P+  TY T +           + +C EG
Sbjct: 636 VTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI-----------SWQCKEG 684

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + + A   F     +G  PSNL  N L+    +       F VL
Sbjct: 685 MVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVL 728



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 187/466 (40%), Gaps = 81/466 (17%)

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q GY   F  Y + I  L    K    L+ KL  +++ + I     +   ++  + KAG 
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKF--KLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQ 162

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+R L                            ++  AV+        +P  K+Y+ 
Sbjct: 163 PGQAIRLL----------------------------LDMRAVYL------CEPTFKSYDL 188

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L+  V     + A  V  +M   GV P   T+ +++ A       +SA  +L++M    
Sbjct: 189 VLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PNS +Y  ++     + +     ++L+EM   G  PD   +N +I    K N +H A 
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308

Query: 461 AAFDRMLSEGIEPDTITW-------------------------------NTLIDCHFKCG 489
              DRML  G  PD +T+                               NTLI+ +   G
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368

Query: 490 RYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           +   A+    E M   G+ P   TYNI+++ L ++      + L+  M  +G  PNV+TY
Sbjct: 369 QLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITY 428

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             LV+             C  GL ++A      M   GL  +++  N LI A    ++  
Sbjct: 429 AILVNGL-----------CKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
            A  +L  M   G KPD+ TY +L+  L +VD+  + F   LF N+
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFR--LFHNM 521



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 7/236 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L + +++ EAF L     L       +TYN LI A  R    +KAL L++ M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I++  +   I+  L  +LY+++  D +  D    N +I G  K G 
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGL--ELYEQMIMDGLGADTISCNIMINGLCKVGK 615

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A  FL  A   G  P   TY +V+  L   GR  EA  +F+ L+  G++P    YN 
Sbjct: 616 VDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNT 675

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            +    K G + DA         +G +P   T+++L+         E+   VL E+
Sbjct: 676 FISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731


>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 243/546 (44%), Gaps = 49/546 (8%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAF--LLSQRQRLTPLTYNA 198
           D A  V + +Q H    +Y  ++SIL+ +    G+ +K +E    +  Q  RL   T+  
Sbjct: 27  DEALNVFNEIQDHGWLDAY--VFSILVLSFSKWGQVDKSFEFIEKMEEQNFRLNEKTFCN 84

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           LI    +   ++K + L  KM++ G   D   Y ++I       K+D +L   LY E++ 
Sbjct: 85  LIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKAL--SLYAEMKM 142

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
            KI+ D  +++ +I  F + G     +      + + +  +T    +V+++L NSG   +
Sbjct: 143 LKIQPDIGVVSKLISSFPEEGKLIDILE--ETLEDMNIETQTLLCNSVLSSLVNSGLIDK 200

Query: 319 AEAVFEELKESG--------------LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A  +   +  +G              ++P T +++ ++ G ++   L  A  +  +M   
Sbjct: 201 ACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEI 260

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G   D   Y+ LI+   N+ R E +  +LKEME S  KP  F  + I      R +    
Sbjct: 261 GCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGA 320

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             ++K+M+  G EP    Y +++    K+     A      M+ EG  P+ I ++ L+  
Sbjct: 321 LDLVKKMRLYGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGG 380

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             +    D+A +LF+++  RG  P    YNI++  L E  R E+ + L   M  +GL+P+
Sbjct: 381 LIEVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPS 440

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------DQAVNAFR 580
           VVTY  L+D + ++G  DDA+ CL  +S                        D AV  + 
Sbjct: 441 VVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWN 500

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            MR  G +P+ +A    I+   +  +   A      M+E  ++PD   Y +L+ A + + 
Sbjct: 501 EMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVSAFVNIS 560

Query: 641 KFHKVF 646
            F   F
Sbjct: 561 NFPMAF 566



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 180/441 (40%), Gaps = 55/441 (12%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +  N L+ AC     L+ A+ L   M + G + D + Y+ +I  L  +++++ S   KL 
Sbjct: 236 IVINGLMQACK----LDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEES--YKLL 289

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE+E    +     LN +     K  D S A+  +   +  G  P    Y  ++  L   
Sbjct: 290 KEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLLVRKLCKH 349

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA     ++ + G  P   AY+ALL G +++  +  A  +  ++   G  PD   Y
Sbjct: 350 GKAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLFKDISARGRCPDVIAY 409

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+     A R E AR +  EM                              V+K    
Sbjct: 410 NILMKGLYEAHRTEEARNLFNEM------------------------------VMK---- 435

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P    YN++ID + K  C+  AM     M ++  EP+  T+ TLID   K GR D 
Sbjct: 436 -GLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDD 494

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L+ EM+ RG  P    +   I+ L + ++ E        M  + + P+   Y +LV 
Sbjct: 495 AVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLVS 554

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            +     F  A E L+ + D      R    D L  + + +   I    +D R + +   
Sbjct: 555 AFVNISNFPMAFEILKKMVD------RRNFPDPLDKNCIIIRDAILKLSKDARTSSSVKS 608

Query: 614 L--------QYMKENGLKPDV 626
           L         Y+ +NG K +V
Sbjct: 609 LIASGSIPTIYLSDNGDKGEV 629



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 63/404 (15%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG------------------------ 330
           GLS    T   V+    N+G+  EA  VF E+++ G                        
Sbjct: 5   GLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWLDAYVFSILVLSFSKWGQVDKSF 64

Query: 331 ----------LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
                      +   K +  L+ G+VK   +     +  +M++ G+ PD   Y +LI  +
Sbjct: 65  EFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVLIGGF 124

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE-MKSSGVEPD 439
            +  + + A  +  EM++   +P+  + S++++ + + G   +   +L+E ++   +E  
Sbjct: 125 CSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEG---KLIDILEETLEDMNIETQ 181

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEG--------------IEPDTITWNTLIDCH 485
           T   N ++ +      +  A      M+  G              I P+T +++ +I+  
Sbjct: 182 TLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASFSIVINGL 241

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +  + D A  LF++M E G       YN +IN L   +R E+  +LL  M   G  P  
Sbjct: 242 MQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESYKLLKEMEESGFKP-- 299

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            T  TL  I+G   +  D           A++  + MR  G +P       L+    +  
Sbjct: 300 -TQFTLNSIFGCLCKRQDV--------SGALDLVKKMRLYGCEPWVKHYTLLVRKLCKHG 350

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + AEA   L  M + G  P+++ Y+ L+  LI V +  +    +
Sbjct: 351 KAAEASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEVDQALKLF 394



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 133/292 (45%), Gaps = 12/292 (4%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+   ++T + ++  Y NAG+++ A  V  E++  H   +++++S ++  +   G+
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQ-DHGWLDAYVFSILVLSFSKWGQ 59

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
             ++F+ +++M+      +   +  +I  F K + +   +  F +M   G+ PD   ++ 
Sbjct: 60  VDKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDV 119

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL---GNMR 537
           LI       + D+A  L+ EM+     P     + +I+   E+ +  D+        N+ 
Sbjct: 120 LIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKLISSFPEEGKLIDILEETLEDMNIE 179

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE---GLSDQAVNAFRVMRTDGLKPSNLAL 594
            Q LL N V  ++LV+    SG  D A   L    G  D     +++ R + ++P+  + 
Sbjct: 180 TQTLLCNSV-LSSLVN----SGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNTASF 234

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + +IN   +  +   A  + Q M E G   D++ Y  L+  L   D+  + +
Sbjct: 235 SIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRLEESY 286



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 23/145 (15%)

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA---VNAFRVMR--------- 583
           MR QGL  +  T T ++ +Y  +G+FD+A+     + D        F ++          
Sbjct: 1   MRDQGLSFSKYTLTPVLQVYCNAGKFDEALNVFNEIQDHGWLDAYVFSILVLSFSKWGQV 60

Query: 584 ------TDGLKPSNLALN-----SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                  + ++  N  LN     +LI+ F +  R  +   +   M++ GL PD+  Y  L
Sbjct: 61  DKSFEFIEKMEEQNFRLNEKTFCNLIHGFVKQSRVDKGVQLFYKMQKYGLSPDISLYDVL 120

Query: 633 MKALIRVDKFHKVFSSYLFFNIYKM 657
           +       K  K  S Y    + K+
Sbjct: 121 IGGFCSNKKLDKALSLYAEMKMLKI 145


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 195/417 (46%), Gaps = 16/417 (3%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +++S V+  + ++   D  L+  L+  +E   I  D    N VI    +      A+  
Sbjct: 10  IVDFSKVLSKIAKSKNYD--LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           +G     G  P   T +++I       R  +A  +  +++E G +P    YN ++ G  K
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G + DA  +   MER GV  D  TY+ L+     +GRW  A  ++++M +    PN   
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           ++ ++  +   G++    ++ +EM    V+PD   YN +I+    +  +  A    D M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           ++G  PD +T+NTLI+   K  R D   +LF EM +RG    T TYN +I    +  R +
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
             + +   M ++   PN+ TY+ L  +YG          C+    ++A+  F  M+   +
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSIL--LYGL---------CMNWRVEKALVLFENMQKSEI 353

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +      N +I+   +     +A+ + + +   GLKPDVV+YTT++    R  ++ K
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 410



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 185/405 (45%), Gaps = 18/405 (4%)

Query: 149 VVSWLQKHNLCYSYELLYS--ILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALIS 201
           V+S      +C     LYS  I+I+ L R  +   A  ++ +  +       +T ++LI+
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 88

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
              + + +  A++L+SKM + G+  D + Y+ +I    +   ++ ++  +L+  +E D +
Sbjct: 89  GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV--ELFDRMERDGV 146

Query: 262 ELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             D    N ++ G   +G   DA++ MR + M     + P   T+ AVI      G+  E
Sbjct: 147 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD---IVPNVITFTAVIDVFVKEGKFSE 203

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  ++EE+    + P    YN+L+ G    G + +A+ ++  M   G LPD  TY+ LI+
Sbjct: 204 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 263

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +  + R +    + +EM       ++  Y+ I+ GY   G      ++   M S    P
Sbjct: 264 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RP 320

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   Y++++        +  A+  F+ M    IE D  T+N +I    K G  + A +LF
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             +  +G  P   +Y  MI+    + +W+    L   M+  GLLP
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 179/387 (46%), Gaps = 17/387 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLS 186
           ++++ N     S   +A +VV  + K    + YE   +  S LI+   +  ++++A  L 
Sbjct: 48  YNIVINCLCRCSRFVIALSVVGKMMK----FGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 187 QRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
            +      R   + YN +I    +   +  A+ L  +M +DG   D + Y+ ++  L  +
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +   +   +L +++    I  +      VI  F K G  S+AM+         + P   
Sbjct: 164 GRWSDA--ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 221

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY ++I  L   GR  EA+ + + +   G  P    YN L+ G+ K   + +   +  EM
Sbjct: 222 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + G++ D  TY+ +I  Y  AGR ++A+ +   M+   ++PN   YS +L G       
Sbjct: 282 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRV 338

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++   + + M+ S +E D   YN++I    K   +  A   F  +  +G++PD +++ T+
Sbjct: 339 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 398

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFP 508
           I    +  ++D+++ L+ +MQE G  P
Sbjct: 399 ISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 62/311 (19%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+   +S++L+       +     +   M+  G+  D + YN++I+   + +    
Sbjct: 4   SRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI 63

Query: 459 AMAAFDRMLSEGIEPDTIT-----------------------------------WNTLID 483
           A++   +M+  G EPD +T                                   +NT+ID
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G  + A ELF+ M+  G      TYN ++  L    RW D  RL+ +M  + ++P
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183

Query: 544 NVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAF 579
           NV+T+T ++D++ + G+F +A++                        C+ G  D+A    
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI-- 637
            +M T G  P  +  N+LIN F + +R  E   + + M + GL  D +TY T+++     
Sbjct: 244 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303

Query: 638 -RVDKFHKVFS 647
            R D   ++FS
Sbjct: 304 GRPDAAQEIFS 314



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            ++ F  M   GI  D  ++N +I+C  +C R+  A  +  +M + GY P   T + +IN
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 88

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R  D   L+  M   G  P+VV Y T++D             C  GL + AV  
Sbjct: 89  GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG-----------SCKIGLVNDAVEL 137

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M  DG++   +  NSL+       R ++A  +++ M    + P+V+T+T ++   ++
Sbjct: 138 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 197

Query: 639 VDKFHKVFSSY 649
             KF +    Y
Sbjct: 198 EGKFSEAMKLY 208


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 215/473 (45%), Gaps = 15/473 (3%)

Query: 174 GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G+ E++   F L Q++  +    TY  +  + +    L++A   + KMR+ G+  +  +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + +I  L ++     ++  ++Y+ +  +      Q  + ++VG  K  D    M  L   
Sbjct: 192 NGLIHLLLKSRFCTEAM--EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           + +GL P   T+   I  L  +G+  EA  + + + + G  P    Y  L+        L
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A+ V  +M+     PD  TY  L+D +++    +S +    EME     P+   ++ +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +      G +   F  L  M+  G+ P+ H YN +I    + + L  A+  F  M S G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +P   T+   ID + K G    A E FE+M+ +G  P     N  +  L +  R  + K+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           +   ++  GL+P+ VTY  ++  Y + G  D+AI+ L             M  +G +P  
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE-----------MMENGCEPDV 538

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + +NSLIN   +  R  EA+ +   MKE  LKP VVTY TL+  L +  K  +
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 235/499 (47%), Gaps = 32/499 (6%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           YS L+  LG+   +     LL + + L       T+   I    R   + +A  ++ +M 
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D + Y+++I +L    K+D +  ++++++++  + + D      ++  F+   D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCA--KEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                +F    +  G  P   T+  ++ AL  +G   EA    + +++ G+ P    YN 
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G +++  L DA  +   ME  GV P  +TY + ID Y  +G   SA    ++M+   
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463

Query: 401 AKPN-----SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
             PN     + +YS   AG RDR E ++ F  LK++   G+ PD+  YN+M+  + K   
Sbjct: 464 IAPNIVACNASLYSLAKAG-RDR-EAKQIFYGLKDI---GLVPDSVTYNMMMKCYSKVGE 518

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+     M+  G EPD I  N+LI+  +K  R D A ++F  M+E    P   TYN 
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           ++  LG+  + ++   L   M  +G  PN +T+ TL D   ++     A++ L       
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML------- 631

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F++M   G  P     N++I    ++ +  EA      MK+  + PD VT  TL+  
Sbjct: 632 ---FKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686

Query: 636 LIR---VDKFHKVFSSYLF 651
           +++   ++  +K+ +++L+
Sbjct: 687 VVKASLIEDAYKIITNFLY 705



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 232/544 (42%), Gaps = 88/544 (16%)

Query: 166  YSILIHALGRSEKLYEAFLL--SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
            Y+ L+  LG++ K+ EA  L     Q+  P   +T+N L     +ND++  AL ++ KM 
Sbjct: 576  YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIEL--------DGQLLND 270
              G   D   Y+ +I  L +  ++  ++    ++ K +  D + L           L+ D
Sbjct: 636  DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695

Query: 271  ---VIVGFAKAGDASKAMRF-----------LGMAQGVGLSPK----------TATYAAV 306
               +I  F        A  F            G+   V  S +           +    +
Sbjct: 696  AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755

Query: 307  ITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
            I           A  +FE+  K+ G++P+   YN L+ G ++   ++ A+ V  +++ +G
Sbjct: 756  IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815

Query: 366  VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG----------- 414
             +PD  TY+ L+DAY  +G+ +    + KEM     + N+  ++ +++G           
Sbjct: 816  CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875

Query: 415  ------YRDR-------------------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                    DR                   G      Q+ + M   G  P+   YN++I+ 
Sbjct: 876  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935

Query: 450  FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            FGK      A A F RM+ EG+ PD  T++ L+DC    GR D     F+E++E G  P 
Sbjct: 936  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995

Query: 510  TTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YN++IN LG+  R E+   L   M+ ++G+ P++ TY +L+   G           +
Sbjct: 996  VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG-----------I 1044

Query: 569  EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             G+ ++A   +  ++  GL+P+    N+LI  +    +   A+AV Q M   G  P+  T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104

Query: 629  YTTL 632
            Y  L
Sbjct: 1105 YEQL 1108



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 12/403 (2%)

Query: 125  PAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE------LLYSILIHALGRSE 177
            PA L W  L+ ++ +  + ID A +    L  + +C   +      + YS   + +  + 
Sbjct: 711  PANLFWEDLIGSILAE-AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769

Query: 178  KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             L+E F      +    TYN LI      D +E A ++  +++  G   D   Y+ ++ +
Sbjct: 770  TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829

Query: 238  LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGL 296
              ++ KID   L +LYKE+   + E +    N VI G  KAG+   A+  +  +      
Sbjct: 830  YGKSGKIDE--LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887

Query: 297  SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            SP   TY  +I  LS SGR  EA+ +FE + + G +P    YN L+ G+ K G    A  
Sbjct: 888  SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947

Query: 357  VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
            +   M + GV PD  TYS+L+D     GR +      KE++ S   P+   Y+ I+ G  
Sbjct: 948  LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007

Query: 417  DRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                 +    +  EMK+S G+ PD + YN +I   G    +  A   ++ +   G+EP+ 
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067

Query: 476  ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             T+N LI  +   G+ + A  +++ M   G+ P T TY  + N
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 170/379 (44%), Gaps = 24/379 (6%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           F  +A  + L   T T   ++ AL   G+  E   VF+ +++  +K  T  Y  + K   
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G LK A + + +M   G + + ++Y+ LI     +     A  V + M +   +P+  
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS ++ G   R +      +LKEM++ G++P+ + + + I   G+   ++ A     RM
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             EG  PD +T+  LID      + D A+E+FE+M+   + P   TY  +++   +    
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV---------- 576
           + VK+    M   G +P+VVT+T LVD   ++G F +A + L+ + DQ +          
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 577 --NAFRVMRTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                RV R D            G+KP+       I+ +G+      A    + MK  G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 623 KPDVVTYTTLMKALIRVDK 641
            P++V     + +L +  +
Sbjct: 465 APNIVACNASLYSLAKAGR 483



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/539 (22%), Positives = 239/539 (44%), Gaps = 27/539 (5%)

Query: 124  VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
            VP  + ++++    S    ID A  ++S + + N C    ++ + LI+ L +++++ EA 
Sbjct: 500  VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAW 558

Query: 183  --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              F+  +  +L P  +TYN L++   +N  +++A+ L   M Q G   + I ++ +   L
Sbjct: 559  KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618

Query: 239  TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
             + +++  +L + L+K ++   +  D    N +I G  K G   +AM F    + + + P
Sbjct: 619  CKNDEVTLAL-KMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYP 675

Query: 299  KTATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
               T   ++  +  +    +A  +    L     +P    +  L+   +    + +A   
Sbjct: 676  DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735

Query: 358  VSEMERSGVLPDEHTYSLLIDAYA-NAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGY 415
               +  +G+  D  +  + I  Y+        AR + ++       +P    Y+ ++ G 
Sbjct: 736  SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795

Query: 416  RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
             +    +    V  ++KS+G  PD   YN ++D +GK   +      +  M +   E +T
Sbjct: 796  LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855

Query: 476  ITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT N +I    K G  D A +L+ + M +R + P   TY  +I+ L +  R  + K+L  
Sbjct: 856  ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915

Query: 535  NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
             M   G  PN   Y  L++ +G++G            +D A   F+ M  +G++P     
Sbjct: 916  GMLDYGCRPNCAIYNILINGFGKAGE-----------ADAACALFKRMVKEGVRPDLKTY 964

Query: 595  NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + L++      R  E     + +KE+GL PDVV Y  ++  L    K H++  + + FN
Sbjct: 965  SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFN 1020



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)

Query: 84   FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
              P++ +  +++N   A  L    +    V+ KL         P ++ L+  L  ++  I
Sbjct: 752  LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL---------PTYNLLIGGLLEADM-I 801

Query: 144  DLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYN 197
            ++A  V  +LQ K   C      Y+ L+ A G+S K+ E F L     +       +T+N
Sbjct: 802  EIAQDV--FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859

Query: 198  ALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
             +IS   +  +++ AL+L   +  D  +      Y  +I  L+++ ++  +  ++L++ +
Sbjct: 860  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA--KQLFEGM 917

Query: 257  ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                   +  + N +I GF KAG+A  A          G+ P   TY+ ++  L   GR 
Sbjct: 918  LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977

Query: 317  IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSL 375
             E    F+ELKESGL P    YN ++ G  K   L++A  + +EM+ S G+ PD +TY+ 
Sbjct: 978  DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037

Query: 376  LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            LI     AG  E A  +  E++ +  +PN F ++ ++ GY   G+ +  + V + M + G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097

Query: 436  VEPDTHFY 443
              P+T  Y
Sbjct: 1098 FSPNTGTY 1105


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 207/476 (43%), Gaps = 28/476 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY ALI        L +    + +M +        + S +++ L +   ++ +L   ++ 
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKAL--SIFY 183

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNS 313
           +I+  K +      N +I+   + G   K       M       P T TY+A+I A    
Sbjct: 184 QIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKL 243

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR   A ++F+E+KE+GL P  K Y  +L  Y K+G ++ A  +V EM+  G     +TY
Sbjct: 244 GRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTY 303

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI     AG+ E A  +   M     KP+  + + ++      G      ++ +EM+S
Sbjct: 304 TELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES 363

Query: 434 SGVEPDTHFYNVMIDT-FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
               P+   YN +I   F        A   +++M   G+ P + T++ LID   K  R +
Sbjct: 364 LQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVE 423

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A  L EEM E+G+ PC   Y  +IN LG+ +R+E    L   +R      +   Y  ++
Sbjct: 424 KALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMI 483

Query: 553 DIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLK 588
              G+ GR  +A++                           G++D+A +  R M  +G  
Sbjct: 484 KHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCT 543

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           P   + N ++N F        A  +   MK + +KPDVV+Y T++  L R   F +
Sbjct: 544 PDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEE 599



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C    + YS LI A   LGR +     F   +   L P    Y  ++    +   +EKAL
Sbjct: 226 CLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDV 271
            L+ +M++ G       Y+ +I+ + +  K++   S+   + KE      + D  L+N++
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE----GCKPDVVLINNL 341

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESG 330
           I    KAG  + A++     + +  +P   TY  VI AL  S  R  EA   +E++KE+G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LI+A   A R+E+A 
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +E+  +    ++ +Y+ ++      G       +  EMK  G  PD + YN ++   
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +      A +    M   G  PD  + N +++   + G    A E+F  M+     P  
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +YN ++  L     +E+  +L+  M ++G   +++TY+++++  G+
Sbjct: 582 VSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 13/311 (4%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+    + G L +    + EM RS  +      S ++     A     A  +  +++
Sbjct: 127 YMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIK 186

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCL 456
               KP S  Y+ ++      G  ++  ++  EM + G   PDT  Y+ +I  FGK    
Sbjct: 187 GRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRD 246

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A++ FD M   G+ P    + T++  +FK GR ++A  L +EM+E+G      TY  +
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I  +G+  + E+   +  NM  +G  P+VV    L+++ G++GR  DAI+          
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK---------- 356

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQ-RDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             F  M +    P+ +  N++I A  E + R +EAF   + MKENG+ P   TY+ L+  
Sbjct: 357 -LFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415

Query: 636 LIRVDKFHKVF 646
             + ++  K  
Sbjct: 416 FCKTNRVEKAL 426


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 207/476 (43%), Gaps = 28/476 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY ALI        L +    + +M +        + S +++ L +   ++ +L   ++ 
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKAL--SIFY 183

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNS 313
           +I+  K +      N +I+   + G   K       M       P T TY+A+I A    
Sbjct: 184 QIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKL 243

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR   A ++F+E+KE+GL P  K Y  +L  Y K+G ++ A  +V EM+  G     +TY
Sbjct: 244 GRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTY 303

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI     AG+ E A  +   M     KP+  + + ++      G      ++ +EM+S
Sbjct: 304 TELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES 363

Query: 434 SGVEPDTHFYNVMIDT-FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
               P+   YN +I   F        A   +++M   G+ P + T++ LID   K  R +
Sbjct: 364 LQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVE 423

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A  L EEM E+G+ PC   Y  +IN LG+ +R+E    L   +R      +   Y  ++
Sbjct: 424 KALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMI 483

Query: 553 DIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLK 588
              G+ GR  +A++                           G++D+A +  R M  +G  
Sbjct: 484 KHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCT 543

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           P   + N ++N F        A  +   MK + +KPDVV+Y T++  L R   F +
Sbjct: 544 PDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEE 599



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C    + YS LI A   LGR +     F   +   L P    Y  ++    +   +EKAL
Sbjct: 226 CLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDV 271
            L+ +M++ G       Y+ +I+ + +  K++   S+   + KE      + D  L+N++
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE----GCKPDVVLINNL 341

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESG 330
           I    KAG  + A++     + +  +P   TY  VI AL  S  R  EA   +E++KE+G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LI+A   A R+E+A 
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +E+  +    ++ +Y+ ++      G       +  EMK  G  PD + YN ++   
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +      A +    M   G  PD  + N +++   + G    A E+F  M+     P  
Sbjct: 522 VRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDV 581

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +YN ++  L     +E+  +L+  M ++G   +++TY+++++  G+
Sbjct: 582 VSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 13/311 (4%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+    + G L +    + EM RS  +      S ++     A     A  +  +++
Sbjct: 127 YMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIK 186

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCL 456
               KP S  Y+ ++      G  ++  ++  EM + G   PDT  Y+ +I  FGK    
Sbjct: 187 GRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRD 246

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A++ FD M   G+ P    + T++  +FK GR ++A  L +EM+E+G      TY  +
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I  +G+  + E+   +  NM  +G  P+VV    L+++ G++GR  DAI+          
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK---------- 356

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQ-RDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             F  M +    P+ +  N++I A  E + R +EAF   + MKENG+ P   TY+ L+  
Sbjct: 357 -LFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDG 415

Query: 636 LIRVDKFHKVF 646
             + ++  K  
Sbjct: 416 FCKTNRVEKAL 426


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 215/451 (47%), Gaps = 15/451 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           TPL Y+A+++A   +   ++AL  +  M  +G+      ++ ++  L R+N  D +    
Sbjct: 89  TPL-YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWW-- 145

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           ++  ++  K+ L+      +I G  +AG   +  R L + +  GLSP    Y  +I    
Sbjct: 146 IFNVLK-SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCC 204

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +G  + A+ +F ++   GL P    Y+ L+ G+ K G  ++   +   M RSG++P+ +
Sbjct: 205 KNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAY 264

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ LI  Y N G  + A  V  EM           Y+ ++ G     ++    +++ ++
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ P+   YN++I+ F     +  A+  F+++ S G+ P  +T+NTLI  + K    
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A +L +EM+ER       TY I+I+        +    +   M   GL+P+V TY+ L
Sbjct: 385 AGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVL 444

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
             I+G          C+ G   +A   F+ +    L+P+++  N++I+ + ++     A 
Sbjct: 445 --IHGX---------CVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +L  M  +G+ P+V ++ + M  L R +K+
Sbjct: 494 RLLNEMVHSGMVPNVASFCSTMGLLCRDEKW 524



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 180/443 (40%), Gaps = 78/443 (17%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           E +   P  + ++ L + C  N  + LA  +   + +  L  + +  YS+L++   +   
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPN-QHTYSVLMNGFFKQGL 243

Query: 179 LYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
             E F + +   R  + P    YN LIS    +  ++KA  + ++MR+ G  C  + Y++
Sbjct: 244 QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I  L R  K                                       +A++ +     
Sbjct: 304 LIGGLCRGKKF-------------------------------------GEAVKLVHKVNK 326

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VGLSP   TY  +I    + G+   A  +F +LK SGL P    YN L+ GY K+  L  
Sbjct: 327 VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAG 386

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +V EME   +   + TY++LIDA+A                                
Sbjct: 387 ALDLVKEMEERCIARSKVTYTILIDAFARLN----------------------------- 417

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
            Y D+     +      M+ SG+ PD + Y+V+I        +  A   F  +    ++P
Sbjct: 418 -YTDKACEMHSL-----MEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQP 471

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +++ +NT+I  + K G   RA  L  EM   G  P   ++   + LL   E+W++ + LL
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLL 531

Query: 534 GNMRAQGLLPNVVTYTTLVDIYG 556
           G M   GL P+V  Y  +  + G
Sbjct: 532 GQMINSGLKPSVSLYKMVHKVKG 554



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 15/211 (7%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  Y+ +++ +   +    A+     M+ EG  P + T+N L+    +   +D+A  +F 
Sbjct: 89  TPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN 148

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            ++ +       ++ IMI    E   +  V RLL  +   GL PNVV YTTL+D      
Sbjct: 149 VLKSKVVLN-AYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC---- 203

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C  G    A N F  M   GL P+    + L+N F +     E F + + M  
Sbjct: 204 -------CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNR 256

Query: 620 NGLKPDVVTYTTLMKALIR---VDKFHKVFS 647
           +G+ P+   Y  L+        VDK  KVF+
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFA 287


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 236/504 (46%), Gaps = 37/504 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  +   +     TY  LI +  +   +E+A +   +MR
Sbjct: 291 YSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 350

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   + + Y+ ++ +  +  ++   S +  ++  +  C    +    L D   G  KA
Sbjct: 351 SIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI-DAGCPPNTITYSALVD---GLCKA 406

Query: 279 GDASKAM----RFLGMAQGVG------------LSPKTATYAAVITALSNSGRTIEAEAV 322
           G+  KA     + +G +  VG            ++P   TY A+I  L  + + ++A+ +
Sbjct: 407 GEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 466

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +  +G +P    Y+AL+ G+ K+G + +A+ V   M + G LP  HTY+ LIDA   
Sbjct: 467 LDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFK 526

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             R + A  VL +M  S   PN   Y+ ++ G    GE Q+  ++L  M+  G  P+   
Sbjct: 527 DRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVT 586

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  +ID  GK   +  ++  F +M ++G  P+ +T+  LI+     G  D A  L  EM+
Sbjct: 587 YTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 646

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           +  +      Y  ++   G  +++     LL  + + G +P    Y  L+D + ++GR +
Sbjct: 647 QTYWPKYLQGYCSVVQ--GFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLE 704

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           +A+E  + + + + ++  +   D          SLI A     +  +AF +   +   G+
Sbjct: 705 EALELHKEMMELS-SSLNITSKD-------MYTSLIQALCLASQLEKAFELYSEITRKGV 756

Query: 623 KPDVVTYTTLMKALIRVDKFHKVF 646
            P++  +  L+K LI+V+K+++  
Sbjct: 757 VPELSVFVCLIKGLIKVNKWNEAL 780



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 135/572 (23%), Positives = 222/572 (38%), Gaps = 115/572 (20%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS----SL 248
           P  +N+L+ +     D   A  L+ +M   G    ++ Y++ I S+    ++ S    +L
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            +K+Y+E+      L+     +        G    A + + +  G G  P T+TY+ VIT
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  + +  +A  +F+E+K  G+ P    Y  L+  + K G ++ A     EM   G   
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ L+ AY  A +   A  +   M  +   PN+  YS ++ G    GE Q+  +V 
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416

Query: 429 KEM----------------KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            ++                 +  + P+   Y  +ID   K + +  A    D MLS G E
Sbjct: 417 TKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCE 476

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP------------------------ 508
           P+ I ++ LID   K G+ D A+E+F  M + GY P                        
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKV 536

Query: 509 --------CT---TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
                   CT    TY  MI+ L      +   +LL  M  +G  PNVVTYT L+D  G+
Sbjct: 537 LSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGK 596

Query: 558 SGRFDDAIE------------------------CLEGLSDQAVNAFRVMR---------- 583
           SG+ D +++                        C  GL D+A +    M+          
Sbjct: 597 SGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQG 656

Query: 584 -----------------------TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
                                  + G  P       LI+ F +  R  EA  + + M E 
Sbjct: 657 YCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMEL 716

Query: 621 GLKPDVVT---YTTLMKALIRVDKFHKVFSSY 649
               ++ +   YT+L++AL    +  K F  Y
Sbjct: 717 SSSLNITSKDMYTSLIQALCLASQLEKAFELY 748



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 124/538 (23%), Positives = 213/538 (39%), Gaps = 86/538 (15%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +  TYNAL+   A    ++    +  +M + G+  D        Q+L +  +   +L+
Sbjct: 37  RPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALV 96

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                 IE +  +LD  L   +I G  +A    +A+ FL   +     P   TY  ++T 
Sbjct: 97  M-----IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTG 151

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
                +    + +   + + G  P    +N+L+  Y        A  ++  M   G  P 
Sbjct: 152 FLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPG 211

Query: 370 EHTYSLLIDAYANA-----------------------------------------GRWES 388
              Y++ I +                                             G+++ 
Sbjct: 212 YVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDM 271

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++K M      P++  YS+++    +  + ++ F + +EMKS GV PD + Y ++ID
Sbjct: 272 AFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILID 331

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +F K   +  A + FD M S G   + +T+  L+  + K  +  +A ++F  M + G  P
Sbjct: 332 SFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPP 391

Query: 509 CTTTYNIMINLL---GE-QERWEDVKRLLGNMRAQG------------LLPNVVTYTTLV 552
            T TY+ +++ L   GE Q+  E   +L+G     G            + PNVVTY  L+
Sbjct: 392 NTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALI 451

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D   ++ +  DA E                        C  G  D A   F  M   G  
Sbjct: 452 DGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYL 511

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P+     SLI+A  +D+R   A  VL  M E+   P+VVTYT ++  L R+ +  K  
Sbjct: 512 PTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 161/427 (37%), Gaps = 85/427 (19%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           +S + A  AA+ ++L  +  +  +     ELK+ G +P    YNAL++     G +    
Sbjct: 2   ISRRVAATAALRSSLRRACSS-SSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGF 60

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV----------------------- 392
            V  EM  SG   D+ T      A    GRW  A ++                       
Sbjct: 61  RVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEA 120

Query: 393 ---------LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
                    L  M  +   PN   Y  +L G+  + +     +++  M   G  P+   +
Sbjct: 121 SLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLF 180

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-------------------- 483
           N ++ ++       +A     RM   G  P  + +N  I                     
Sbjct: 181 NSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKV 240

Query: 484 ---------------------CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
                                C    G++D A ++ + M  +G+ P T+TY+ +I  L E
Sbjct: 241 YEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCE 300

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
             + E    L   M++ G+ P+V TYT L+D +           C  GL +QA + F  M
Sbjct: 301 AMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSF-----------CKAGLIEQARSWFDEM 349

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           R+ G   + +   +L++A+ + ++  +A  +   M + G  P+ +TY+ L+  L +  + 
Sbjct: 350 RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEI 409

Query: 643 HKVFSSY 649
            K    Y
Sbjct: 410 QKACEVY 416



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/441 (22%), Positives = 186/441 (42%), Gaps = 61/441 (13%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKAL 213
           C +  + Y+ L+HA  ++++L +A  +  R       P  +TY+AL+    +  +++KA 
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413

Query: 214 NLMSKMRQ-----------DGYHCD-----FINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            + +K+             +G H D      + Y  +I  L + +K+  +  Q+L   + 
Sbjct: 414 EVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDA--QELLDAML 471

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRT 316
            +  E +  + + +I GF K G    A   FL M++  G  P   TY ++I A+    R 
Sbjct: 472 SNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK-CGYLPTVHTYTSLIDAMFKDRRL 530

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A  V  ++ ES   P    Y A++ G  ++G  + A  ++S ME  G  P+  TY+ L
Sbjct: 531 DLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTAL 590

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-----AGYRDRGE----------W 421
           ID    +G+ + +  +  +M      PN   Y  ++     AG  D             W
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW 650

Query: 422 QRTFQ------------------VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
            +  Q                  +L+E++S G  P    Y ++ID F K   L  A+   
Sbjct: 651 PKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELH 710

Query: 464 DRMLSEGIEPDTIT---WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             M+      +  +   + +LI       + ++A EL+ E+  +G  P  + +  +I  L
Sbjct: 711 KEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGL 770

Query: 521 GEQERWEDVKRLLGNMRAQGL 541
            +  +W +  +L  ++  +G+
Sbjct: 771 IKVNKWNEALQLCYSICDEGV 791


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 229/532 (43%), Gaps = 62/532 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I+ L ++ +L  AF L ++  +  +     TY ALI+   + +  +K  +++ +M 
Sbjct: 258 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI 317

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--------------LYKEIE--C--DKIE 262
             G++ + + ++ +I    +   I+ +L  K              LY  ++  C  D+IE
Sbjct: 318 GAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 377

Query: 263 LDGQLLNDVIVG---------------FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                L +++                   K      A RF  M       P       ++
Sbjct: 378 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 437

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L   G+ +EA  ++  L E G        NAL+ G    G L +A  +V EM   G+ 
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
            D  TY+ LI  + N G+ E    + +EM     +P+ + Y+ +L G  + G+     ++
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             E K+SG+  + H Y +M++ + K N +      F+ +LS+ +E ++I +N +I  H +
Sbjct: 558 WDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQ 617

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G    A +L E M+ +G  P   TY+ +I+ +      ED K L+  MR +G +PNVV 
Sbjct: 618 NGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVC 677

Query: 548 YTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMR 583
           YT L+  Y + G+ D A                          C  G  ++A N    M+
Sbjct: 678 YTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMK 737

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             G+ P  +  N L N F +      AF V   M   GL  D +TYTTL+  
Sbjct: 738 ESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 154/333 (46%), Gaps = 11/333 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G   AG   +A R +      GL     TY A+I    N G+      + EE+ +
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G++P    YN LL+G   +G L DA  +  E + SG++ + HTY ++++ Y  A R E 
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              +  E+     + NS +Y+ I+  +   G      Q+L+ MKS G+ P+   Y+ +I 
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 648

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                  +  A    D M  EG  P+ + +  LI  + K G+ D AE  + EM      P
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY +MI+   +    E    LL  M+  G++P+VVTY  L + + ++   D+A +  
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK-- 766

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             + DQ       M T+GL    +   +L++ +
Sbjct: 767 --VCDQ-------MATEGLPVDEITYTTLVHGW 790



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 191/422 (45%), Gaps = 19/422 (4%)

Query: 133 LKNLCSSNSSI--DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR 190
           L+ + SS  SI  D  Y+VV WL K    + Y        H+  R  K+    +LS+  R
Sbjct: 383 LEEILSSGLSIHPDNCYSVVHWLCKK---FRY--------HSAFRFTKM----MLSRNFR 427

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
            + L    L+    ++    +A  L  ++ + G     +  + +I  L    K+  +   
Sbjct: 428 PSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA--S 485

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ KE+    + +D    N +I+GF   G      R        G+ P   TY  ++  L
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
            N G+  +A  +++E K SGL      Y  +++GY K   ++D E + +E+    +  + 
Sbjct: 546 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+++I A+   G   +A  +L+ M+     PN   YS ++ G  + G  +    ++ E
Sbjct: 606 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 665

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+  G  P+   Y  +I  + K   +  A + +  M+S  I P+  T+  +ID + K G 
Sbjct: 666 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 725

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            ++A  L  +M+E G  P   TYN++ N   +    ++  ++   M  +GL  + +TYTT
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 785

Query: 551 LV 552
           LV
Sbjct: 786 LV 787



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 213/503 (42%), Gaps = 31/503 (6%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ +I+AL   G+ E   E F+  ++  ++P  +TYN +I+   +N  L+ A  L  KM 
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 282

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y  +I  L + N  D   +  +  E+       +  + N++I G+ K G+
Sbjct: 283 VKGVQPNLKTYGALINGLIKLNFFDK--VNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++   +     ++P + T  +++     S +   AE   EE+  SGL        +
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 400

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RIVLKE 395
           ++    K      A      M      P +   ++L+      G+   A     R++ K 
Sbjct: 401 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
              S    N+ I+     G    G+     +++KEM   G+  D   YN +I  F     
Sbjct: 461 SPASKVTSNALIH-----GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGK 515

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +       + M   GI+PD  T+N L+      G+ D A +L++E +  G      TY I
Sbjct: 516 VEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           M+    +  R EDV+ L   + ++ +  N + Y  ++  + Q+G    A++ LE      
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLEN----- 630

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M++ G+ P+    +SLI+         +A  ++  M++ G  P+VV YT L+  
Sbjct: 631 ------MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGG 684

Query: 636 LIRVDKFHKVFSSYL---FFNIY 655
             ++ +     S++L    FNI+
Sbjct: 685 YCKLGQMDTAESTWLEMISFNIH 707



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P   ++  VI AL   G+   A  +F ++++ G+ P    YN ++ G  + G L +A
Sbjct: 215 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 274

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  +M   GV P+  TY  LI+       ++    +L EM  +   PN  +++ ++ G
Sbjct: 275 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDG 334

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG--IE 472
           Y   G  +   ++   M S  + P +     ++  F K + + HA  A + +LS G  I 
Sbjct: 335 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 394

Query: 473 PDTITWNTLIDCHFKCG--RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           PD    N     H+ C   RY  A    + M  R + P      +++  L +  +  +  
Sbjct: 395 PD----NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 450

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            L   +  +G   + VT   L  I+G  G          G   +A    + M   GL   
Sbjct: 451 ELWFRLLEKGSPASKVTSNAL--IHGLCG---------AGKLPEASRIVKEMLERGLPMD 499

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +  N+LI  F  + +    F + + M + G++PD+ TY  L++ L  V K 
Sbjct: 500 RITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 551



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           E+++  +V + M S G  PD   +  +I+   K   + +A+  F +M   GI P+ +T+N
Sbjct: 201 EFEKCCEVFRVM-SEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYN 259

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +I+   + GR D A EL E+M  +G  P   TY  +IN L +   ++ V  +L  M   
Sbjct: 260 CIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGA 319

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G  PNVV +  L+D Y + G  + A++    + D       VM +  + P+++ L SL+ 
Sbjct: 320 GFNPNVVVFNNLIDGYCKMGNIEGALK----IKD-------VMISKNITPTSVTLYSLMQ 368

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            F +  +   A   L+ +  +GL        +++  L +  ++H  F
Sbjct: 369 GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAF 415


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 234/512 (45%), Gaps = 23/512 (4%)

Query: 146 AYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNAL 199
           A+ V++ + K    ++ Y   Y+IL+  L R+ +  +A  L +  R   L P  ++YN +
Sbjct: 126 AHGVLALMLKRGFAFNVYN--YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTV 183

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I       +LEKAL L ++M+  G     + + ++I +  +  K+D ++   L KE++  
Sbjct: 184 IRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM--GLLKEMKHK 241

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +E D  +   +I GF   G+  +           G SP   TY  +I      GR  EA
Sbjct: 242 GLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEA 301

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +FE + E G++P    Y  L+ G   +G  K+A  +++ M +    P+  TY+++I+ 
Sbjct: 302 SEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINK 361

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVE 437
                    A  +++ M+    +P++  Y+ +L G   +G+     ++L  M   SS  +
Sbjct: 362 LCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   +N +I    K N LH A+  +D ++ +    D +T N L++   K G  ++A EL
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMEL 481

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++++      P + TY  MI+   +       K LL  MR   L P+V  Y  L+     
Sbjct: 482 WKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSL-- 539

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C +G  DQA   F  M+ D   P  ++ N +I+   +      A ++L  M
Sbjct: 540 ---------CKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              GL PD+ TY+ L+   +++    +  S +
Sbjct: 591 SHAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 168/369 (45%), Gaps = 20/369 (5%)

Query: 285 MRFLGMAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           MR  G A GV       G +     Y  ++  L  +    +A ++  E++++ L P   +
Sbjct: 120 MRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVS 179

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN +++G+ +   L+ A  + +EM+ SG      T+ +LIDA+  AG+ + A  +LKEM+
Sbjct: 180 YNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMK 239

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               + +  +Y+ ++ G+ D GE  R   +  E+   G  P    YN +I  F K   L 
Sbjct: 240 HKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLK 299

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ M+  G+ P+  T+  LID     G+   A +L   M ++   P   TYNI+I
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L +     D   ++  M+ +   P+ +TY +L+              C +G  D+A  
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGL-----------CAKGDLDEASK 408

Query: 578 AFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              +M  D     P  ++ N+LI+   +  R  +A  +   + E     D+VT   L+ +
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468

Query: 636 LIRVDKFHK 644
            ++    +K
Sbjct: 469 TLKSGDVNK 477



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 159/350 (45%), Gaps = 9/350 (2%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +  +L EA     F++ +  R    TY  LI         ++AL L++ M 
Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML 344

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     + + Y+++I  L + + +  +L  ++ + ++  +   D    N ++ G    GD
Sbjct: 345 QKDEEPNVVTYNIIINKLCKDSLVADAL--EIVELMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 281 ASKAMR--FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
             +A +  +L +       P   ++ A+I  L    R  +A  +++ L E          
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL   +K G +  A  +  ++  S ++P+  TY+ +ID +   G    A+ +L +M +
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S   P+ F Y+ +L+    +G   + +++ +EM+     PD   +N+MID   K   +  
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           A +    M   G+ PD  T++ LI+   K G  D A   F++M + G+ P
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 23/212 (10%)

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           H + A   ML  G   +   +N L+    +   + +A  L  EM++    P   +YN +I
Sbjct: 127 HGVLAL--MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVI 184

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
               E +  E   +L   M+  G   ++VT+  L+D + ++G+ D+A+  L         
Sbjct: 185 RGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLL--------- 235

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             + M+  GL+   +   SLI  F +        A+   + E G  P  +TY TL++   
Sbjct: 236 --KEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 638 RVDKFHKVFSSYLFF-------NIYKMLSYSG 662
           ++ +  +    + F        N+Y   +Y+G
Sbjct: 294 KLGRLKEASEIFEFMMERGVRPNVY---TYTG 322


>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
 gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
          Length = 431

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 11/366 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N VI  + ++    K M         G  P   TY  VI +L  +G  + A    +++ +
Sbjct: 18  NAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIK 77

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +GL+P T  YN +L G  K   + +A  + + M+  G   D++TY++LI +     R E 
Sbjct: 78  TGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEE 137

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++  EME     P++  Y+ ++  Y   G  +    VLK+M    + PD +  N +I 
Sbjct: 138 ATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLIT 197

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +      A   F+RM   G+  +T+++N ++DC  K G+   A +  +EM+ RG  P
Sbjct: 198 AVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKP 257

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            + T+N +IN LG  +   +  ++L  MR+ GL P+V TYT +++ + ++G    A E  
Sbjct: 258 NSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFE-- 315

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M   G   + +  N LI+A  +  R  +A  +   MK+ G+ PD +T
Sbjct: 316 ---------MFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366

Query: 629 YTTLMK 634
            T L +
Sbjct: 367 ATVLQQ 372



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 185/370 (50%), Gaps = 6/370 (1%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL- 248
           R   L  NA+I+A  R+  + K ++   ++ + G   +   Y  VIQSL +   +  ++ 
Sbjct: 11  RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMD 70

Query: 249 -LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
            L K+ K      +E D  L N V+ G  KA    +A +     + +G      TYA +I
Sbjct: 71  FLDKMIKT----GLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILI 126

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            +L    R  EA  +F+E++E G  P   AY  ++  Y K G ++ A  V+ +M    + 
Sbjct: 127 RSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLA 186

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD++T + LI A +  GR E A  + + M+ S    N+  ++ +L      G+    +Q 
Sbjct: 187 PDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQF 246

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
           + EM++ G++P++  +N +I+  G+      A      M S G+ PD  T+  +I+   K
Sbjct: 247 MDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAK 306

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G   +A E+F +M++ G      TYN++I+ L +  R++D + +  +M+ +G+LP+ +T
Sbjct: 307 AGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAIT 366

Query: 548 YTTLVDIYGQ 557
            T L  + G+
Sbjct: 367 ATVLQQLAGK 376



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 17/349 (4%)

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           AVI A   S R  +    F+EL + G KP    Y  +++  VK G +  A   + +M ++
Sbjct: 19  AVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLDKMIKT 78

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD   Y++++D    A   + A  +   M+      + + Y+ ++   R  G  +R 
Sbjct: 79  GLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILI---RSLGRCKRD 135

Query: 425 FQ---VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            +   +  EM+  G  P    Y  +ID + K   +  AM    +ML + + PD  T N+L
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    + GR + A E+FE M++ G    T ++N M++  G+  +     + +  M A+G+
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGI 255

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN +T+ TL++  G++             + +A    + MR+ GL P       +I AF
Sbjct: 256 KPNSITFNTLINCLGRAK-----------YASEAYKVLQEMRSAGLTPDVFTYTCMIEAF 304

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            +     +AF +   M++ G   +VVTY  L+ AL++  ++      Y 
Sbjct: 305 AKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYF 353



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 2/295 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L YN ++    + + +++A  L + M+  G   D   Y+++I+SL R  + + + L  L+
Sbjct: 85  LLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATL--LF 142

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+E            +VI  + KAG    AM  L       L+P   T  ++ITA+S +
Sbjct: 143 DEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRT 202

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GRT  A  +FE +K+SG+   T ++NA+L    K G +  A   + EME  G+ P+  T+
Sbjct: 203 GRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITF 262

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+    A     A  VL+EM  +   P+ F Y+ ++  +   G   + F++  +M+ 
Sbjct: 263 NTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEK 322

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +G   +   YN++ID   K      A   +  M  +GI PD IT   L     KC
Sbjct: 323 AGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVLQQLAGKC 377



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 59/317 (18%)

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L  ++ +  + +  + + ++A Y       +     +E+   G +P+ + Y  +I +  
Sbjct: 1   MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  AM   D+M+  G+EPDT+ +N ++D   K    D A +LF  M+  G      
Sbjct: 61  KAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDY 120

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY I+I  LG  +R E+   L   M  +G  P+   YT ++DIY ++GR + A+  L+ +
Sbjct: 121 TYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180

Query: 572 SDQ------------------------AVNAFRVMRTDG--------------------- 586
            D+                        A   F  M+  G                     
Sbjct: 181 LDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKV 240

Query: 587 --------------LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
                         +KP+++  N+LIN  G  +  +EA+ VLQ M+  GL PDV TYT +
Sbjct: 241 GLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCM 300

Query: 633 MKALIRVDKFHKVFSSY 649
           ++A  +     K F  +
Sbjct: 301 IEAFAKAGNMGKAFEMF 317



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 141/284 (49%), Gaps = 9/284 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           L++ +L  L  +N  ID A  + + ++    C + +  Y+ILI +LGR ++  EA LL  
Sbjct: 86  LYNVVLDGLGKANM-IDEACKLFASMKSMG-CPADDYTYAILIRSLGRCKRDEEATLLFD 143

Query: 186 -SQRQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             + +  TP    Y  +I    +   +E A+ ++ KM       D    + +I +++RT 
Sbjct: 144 EMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTG 203

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +  + L  ++++ ++   + ++    N ++    KAG    A +F+   +  G+ P + T
Sbjct: 204 R--TELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSIT 261

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I  L  +    EA  V +E++ +GL P    Y  +++ + K G +  A  +  +ME
Sbjct: 262 FNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDME 321

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G   +  TY+LLIDA   AGR++ AR +  +M+     P++ 
Sbjct: 322 KAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAI 365



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)

Query: 101 SALASSPSSLNRVEF------KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ 154
           ++L ++ S   R E       ++ +S  AV    ++++L + C     + LAY  +  ++
Sbjct: 193 NSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAML-DCCGKAGKVGLAYQFMDEME 251

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDL 209
              +     + ++ LI+ LGR++   EA+ + Q  R   LTP   TY  +I A A+  ++
Sbjct: 252 ARGI-KPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNM 310

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            KA  +   M + G   + + Y+L+I +L +  +
Sbjct: 311 GKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGR 344


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 192/432 (44%), Gaps = 30/432 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL 252
           T+N ++    ++  +  A++       +G   D   Y+ ++  L +  KI  +  L++K+
Sbjct: 132 THNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKI 191

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
                   I     LLN    G  K G   +A+  L      G +P   TY ++I  L  
Sbjct: 192 TANGCTPTIATYNALLN----GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 247

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             R+ EA  +F+E+   GL   T  Y AL++G ++ G +  A  V   M   G +PD  T
Sbjct: 248 EKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 307

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            S +ID    AGR  +A  + K ME     PN  +YS ++ G     +     ++L +MK
Sbjct: 308 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +   PDT  YN++ID   K   +  A A FD ML  G +PD  T+N L+    K G  D
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  +F++M      P   TY  +I+ L ++ +         +M+ +G  P+   Y++LV
Sbjct: 428 AACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLV 487

Query: 553 DIYGQSGRFD------DAIE-----------------CLEGLSDQAVNAFRVMRTDGLKP 589
           D   +SG+ +      D +E                 C     D+AV+ F  +R +G+ P
Sbjct: 488 DGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-P 546

Query: 590 SNLALNSLINAF 601
              A NS+I+  
Sbjct: 547 HPYAYNSIISTL 558



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 214/469 (45%), Gaps = 16/469 (3%)

Query: 102 ALASSPSSLNRVEFKLAESYRAVPAPLWHSL-LKNLCSSNSSIDLAYAVVSWLQKH--NL 158
            LA  P     V  ++ E Y   P+   H+L L  LC S   +    A +   +    N 
Sbjct: 105 CLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVL----AAMDHFETTTTNG 160

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTPL--TYNALISACARNDDLEKAL 213
           C      Y+ ++  L +++K+ +A  L ++      TP   TYNAL++   +   LE+A+
Sbjct: 161 CTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L+ K+  +G   D + Y+ +I  L +  +  S    KL+KE+    + LD      +I 
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKR--SFEAYKLFKEMALRGLVLDTVCYTALIR 278

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  +AG   +A          G  P   T + +I  L  +GR   A  +F+ ++  GL P
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y+AL+ G  K   +  A  ++++M+++   PD  TY++LID    +G  E+AR   
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM  +  KP+ + Y+ +++G+   G       V  +M SS   P+   Y  +I    K 
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             L  A   F  M   G  PD+  +++L+D   K G+ +    LF+EM+  G     T  
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 518

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            ++ +L  +  R ++   L   +R +G +P+   Y +++    +S + +
Sbjct: 519 RLIFHLC-KANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVN 565



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 184/407 (45%), Gaps = 31/407 (7%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
           D +  N +I G+  A +  +A   +  M +  G++P   T+  V+  L  SG+ + A   
Sbjct: 93  DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           FE    +G       Y A++    K   ++DA  ++ ++  +G  P   TY+ L++    
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ---VLKEMKSSGVEPD 439
            GR E A  +L+++  +   P+   Y+ ++ G    G+ +R+F+   + KEM   G+  D
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL---GKEKRSFEAYKLFKEMALRGLVLD 269

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  Y  +I    +   +  A + +  M S+G  PD +T +T+ID   K GR   A  +F+
Sbjct: 270 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 329

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M+ RG  P    Y+ +I+ L +  + +    +L  M+     P+ +TY  L+D   +SG
Sbjct: 330 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 389

Query: 560 R-------FDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
                   FD+ +E                 C  G +D A   F  M +    P+ +   
Sbjct: 390 DVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYG 449

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +LI+   + ++  +A    Q+MKE G  PD   Y++L+  L +  K 
Sbjct: 450 TLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 146/314 (46%), Gaps = 12/314 (3%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +      NALL  + +    ++A  ++     +  LPD  T+++LI  Y  A   E A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 390 RIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
             V++EME  +   P+   ++ +L G    G+        +   ++G   D H Y  ++D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A+A  +++ + G  P   T+N L++   K GR + A +L  ++ + G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +I+ LG+++R  +  +L   M  +GL+ + V YT L+    Q+G+        
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI------- 286

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                QA + ++ M + G  P  + L+++I+   +  R   A  + + M+  GL P+ V 
Sbjct: 287 ----PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 342

Query: 629 YTTLMKALIRVDKF 642
           Y+ L+  L +  K 
Sbjct: 343 YSALIHGLCKARKM 356



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 154/345 (44%), Gaps = 12/345 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G      T  A++   + + R  EA  + +    +   P  + +N L+ GY      ++A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 355 EFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
             V+ EME   GV P   T++L++     +G+  +A    +    +    +   Y+ I+ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                 + Q    +++++ ++G  P    YN +++   K   L  A+    +++  G  P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+ +LID   K  R   A +LF+EM  RG    T  Y  +I  L +  +      + 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M +QG +P+VVT +T++D   ++GR              AV  F+ M   GL P+ + 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRI-----------GAAVRIFKSMEARGLAPNEVV 342

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            ++LI+   + ++   A  +L  MK+    PD +TY  L+  L +
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 387



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 52/305 (17%)

Query: 351 LKDAE-----FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           LKDA+     F      R G     HT + L+D +A   R   A  +LK    +   P+ 
Sbjct: 35  LKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDV 94

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
             ++ ++ GY    E +  F V++EM+   GV P    +N+++    K   +  AM  F+
Sbjct: 95  ETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                     T T    ID H                          TY  +++ L + +
Sbjct: 155 ---------TTTTNGCTIDIH--------------------------TYTAIVDWLAKNK 179

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           + +D   L+  + A G  P + TY  L++   + GR ++AI+ L  + D           
Sbjct: 180 KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD----------- 228

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +G  P  +   SLI+  G+++R  EA+ + + M   GL  D V YT L++ L++  K  +
Sbjct: 229 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQ 288

Query: 645 VFSSY 649
             S Y
Sbjct: 289 ASSVY 293


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 243/515 (47%), Gaps = 27/515 (5%)

Query: 132 LLKNLCSSN--SSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLS 186
           ++ NL + N  S +++  A++S    +++C S   ++  L+     +G +E  YE     
Sbjct: 63  IMGNLMNVNGISPLEVLDALIS---SYDICKSSPAVFDALVRTCTQIGATEGAYEVITKL 119

Query: 187 QRQR--LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           Q     +T   +N  +S   + +D+ +   +  +M   GY  +   ++L+I +L +  ++
Sbjct: 120 QLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRL 179

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD---ASKAMRFLGMAQGVGLSPKTA 301
             ++   +Y+ ++   I  +    N +I G  K G    A K +R + +  G  + P + 
Sbjct: 180 VEAV-SVIYRSLK-TGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSV 237

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY + +      G    AE   +E+    ++P  + Y  L+ GY ++G L++A  +  E+
Sbjct: 238 TYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+LP+   Y+ +I   +  G  E A ++L +M      P+ F YS ++ G    G  
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYL 357

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              F+ L+ +    +  D   +NV+I+   + N L  A      M   G+ PD +T+ TL
Sbjct: 358 NEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTL 417

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID H K G+ + A +++E+M + G  P    YN +IN   ++  ++    L+  +R  GL
Sbjct: 418 IDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL 477

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
             +VVTY TL+  Y   G+            DQA   F  MR  G+  S++  N+LIN+ 
Sbjct: 478 F-DVVTYNTLIHGYCNCGKI-----------DQAFALFSEMRNSGILASHVTYNTLINSL 525

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +     +A  +++ M   GL PD VTYT L+ + 
Sbjct: 526 CKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSF 560



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/540 (24%), Positives = 237/540 (43%), Gaps = 76/540 (14%)

Query: 136 LCSSNSSIDLAYAVVSW-LQKHNLCYSYELLYSILIHALGRSEKLYEA-FLLSQRQRL-- 191
           +C   +S  LA     W L+K ++ +S E    ++IH L  S++  +A F++     +  
Sbjct: 14  ICKFQNSPQLALEFHDWVLEKKSVLHSIESC-CVVIHVLVNSKRYDDALFIMGNLMNVNG 72

Query: 192 -------------------TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
                              +P  ++AL+  C +    E A  +++K++ DG+      ++
Sbjct: 73  ISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWN 132

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
             +  L + N  D +   K+YKE+                                    
Sbjct: 133 NFLSHLLKLN--DVNRFWKMYKEM-----------------------------------V 155

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             G      T+  +I AL   GR +EA +V     ++G+ P    +N ++ G +KMG + 
Sbjct: 156 SYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMD 215

Query: 353 DAEFVVSEME-RSG--VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            A  +V +ME  SG  V PD  TY+  ++ +   G    A    KEM     +PN   Y+
Sbjct: 216 LALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYA 275

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ GY   G  +  F++  E+   G+ P++  YN +I        +  A      M+ +
Sbjct: 276 TLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDK 335

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
            I PD  T++ +I+   + G  + A +  + + E        ++N++IN L         
Sbjct: 336 RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA 395

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
           K+LL NM  +GL+P+VVT+ TL+D + + G+ ++AI+  E          ++++T G KP
Sbjct: 396 KQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYE----------KMIKT-GEKP 444

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + L  NS+IN F ++     A  ++  ++  GL  DVVTY TL+       K  + F+ +
Sbjct: 445 NLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALF 503



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 211/485 (43%), Gaps = 49/485 (10%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL-----GRSEKLY 180
           +P     L   C+   + + AY V++ LQ      +     + L H L      R  K+Y
Sbjct: 92  SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMY 151

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           +  ++S        T+N +I A  +   L +A++++ +  + G   + + ++++I    +
Sbjct: 152 KE-MVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIK 210

Query: 241 TNKIDSSLLQKLYKEIE----CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
              +D +L  KL +++E    C  ++ D    N  + GF K G+ + A  F     G  +
Sbjct: 211 MGAMDLAL--KLVRKMEVMSGCS-VKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEI 267

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   TYA ++   +  G    A  + +EL E GL P +  YN+++      G ++ A  
Sbjct: 268 EPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASL 327

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAG-------------------------------- 384
           ++S+M    + PD+ TYS++I+     G                                
Sbjct: 328 LLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLC 387

Query: 385 ---RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                  A+ +L  M V    P+   +  ++  +   G+ +   QV ++M  +G +P+  
Sbjct: 388 RSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLL 447

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +I+ F K      A+   D +   G+  D +T+NTLI  +  CG+ D+A  LF EM
Sbjct: 448 IYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEM 506

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G      TYN +IN L +       K L+  M  +GL+P+ VTYT L+  + +    
Sbjct: 507 RNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSP 566

Query: 562 DDAIE 566
           ++ IE
Sbjct: 567 EEVIE 571



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/439 (21%), Positives = 177/439 (40%), Gaps = 79/439 (17%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           ++++I+ALG+  +L EA  +  R   T +     T+N +I    +   ++ AL L+ KM 
Sbjct: 166 FNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKME 225

Query: 221 -QDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
              G     D + Y+  +    +   +  ++ ++  KE+   +IE + +    ++ G+ +
Sbjct: 226 VMSGCSVKPDSVTYNSFVNGFCKIGNL--AVAEEFKKEMLGKEIEPNVRTYATLVDGYTR 283

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A R        GL P +  Y ++I  LS  G    A  +  ++ +  + P    
Sbjct: 284 VGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFT 343

Query: 338 YNALLKGYVKMGYLKDA-------------------EFVVSEMERS-------------- 364
           Y+ +++G  + GYL +A                     V++ + RS              
Sbjct: 344 YSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMY 403

Query: 365 --GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G++PD  T+  LID +   G+ E+A  V ++M  +  KPN  IY+ ++ G+   G + 
Sbjct: 404 VRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFD 463

Query: 423 ----------------------------------RTFQVLKEMKSSGVEPDTHFYNVMID 448
                                             + F +  EM++SG+      YN +I+
Sbjct: 464 PAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLIN 523

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +  K   +  A      M+  G+ PD +T+  LI    K    +   EL + M  +G  P
Sbjct: 524 SLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVP 583

Query: 509 CTTTYNIMINLLGEQERWE 527
              TY  M+  L ++E  E
Sbjct: 584 DRQTYQTMVIPLLQEESVE 602


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 210/454 (46%), Gaps = 13/454 (2%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N+L+S   +N +  KAL +  +M   G   D  +Y++++ +  +  ++D +      KE+
Sbjct: 225 NSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAF--NFVKEM 282

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E    E +    N +I G+   GD   A + L +    G+   + TY  +I      G+ 
Sbjct: 283 ERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQM 342

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +AE +   + E  L      Y  L+  Y   G + DA  +   M + G+  +    + L
Sbjct: 343 EQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSL 402

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+ Y   G    A  VL  M+  + KP+S+ Y+ +L G+  + ++ + F++  EM + GV
Sbjct: 403 INGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV 462

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
                 YN ++        + HA+  ++ M   G+ P+ +T+ TL+D  FK G +DRA  
Sbjct: 463 NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMM 522

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           ++++   +G+    T YN MI    + E+    + +   M+  G  P+ +TY TL+D Y 
Sbjct: 523 IWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYC 582

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G   +A++ L+ +S++          DG+  S    NSLI      +   +   +L  
Sbjct: 583 KVGNLVEALK-LKDMSER----------DGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           MK   L P+VVTY +L+          K +++Y 
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 202/460 (43%), Gaps = 20/460 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLS---QRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+++A  +  ++ EAF      +R    P  +TYN+LI       D+  A  +++ M 
Sbjct: 259 YTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMS 318

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y+L+I+   +  +++ +  +KL   +    + +D  +   +I  +  AG 
Sbjct: 319 EKGIPENSRTYTLLIKGYCKRGQMEQA--EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGR 376

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+R       VGL   T    ++I      G   +A  V   +K+  LKP +  YN 
Sbjct: 377 VDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNT 436

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G+ K      A  +  EM   GV     TY+ L+    + G  E A  +   M    
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y  +L  +   G + R   + K+  S G       YN MI  F K   L  A 
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER-GYFPCTTTYNIMINL 519
             F +M   G  PD IT+ TLID + K G    A +L ++M ER G    T  YN +I  
Sbjct: 557 EIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDGISSSTEMYNSLITG 615

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           +   E  + +  LL  M+ + L PNVVTY +L+           A  C +G+ D+A NA+
Sbjct: 616 VFRSEELQKLNGLLAEMKNRELSPNVVTYGSLI-----------AGWCDKGMMDKAYNAY 664

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
             M   G+ P+ +  + ++++     +  EA  +L  + +
Sbjct: 665 FKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 123/570 (21%), Positives = 233/570 (40%), Gaps = 70/570 (12%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLS 186
           L+K  C     ++ A  ++  + + NL +  E +Y +LIHA   + ++ +A      +L 
Sbjct: 332 LIKGYCK-RGQMEQAEKLIGCMMEKNL-FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLK 389

Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              ++  +  N+LI+   +   + KA  ++  M+      D   Y+ ++    +      
Sbjct: 390 VGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIK 449

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +   KL  E+    +       N ++      G    A+    +    G++P   TY  +
Sbjct: 450 AF--KLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           + A    G    A  ++++    G       YN ++ G+ KM  L  A+ +  +M+  G 
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            PDE TY  LID Y   G    A + LK+M E      ++ +Y+ ++ G     E Q+  
Sbjct: 568 PPDEITYRTLIDGYCKVGNLVEA-LKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L EMK+  + P+   Y  +I  +     +  A  A+ +M+ +GI P+ I  + ++   
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686

Query: 486 FKCGRYDRAEELFEEM---------------------------------QERGYFPCTT- 511
           ++ G+ D A  +  ++                                 ++    P +  
Sbjct: 687 YRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNN 746

Query: 512 -TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF-------DD 563
             YNI I  L + +  +DV+R+L ++  +G  P+  TY +L+      G+        DD
Sbjct: 747 IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDD 806

Query: 564 AIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
            I                  C  G  D+A   F  +   GL P+ +  N+LI+ + +  R
Sbjct: 807 MINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGR 866

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             EA  +   M+E G+ P  +TY+TL+  L
Sbjct: 867 TTEALELKDKMREEGICPSSITYSTLIHGL 896



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 24/389 (6%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           FA+ G    A+         G  P   +  ++++ L  +G   +A  V+E++   G+ P 
Sbjct: 196 FAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPD 255

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
             +Y  ++  Y K G + +A   V EMERS   P+  TY+ LID Y + G    A+ VL 
Sbjct: 256 IFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLA 315

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M       NS  Y+ ++ GY  RG+ ++  +++  M    +  D H Y V+I  +    
Sbjct: 316 LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAG 375

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A+   D ML  G++ +T+  N+LI+ + K G  ++A E+   M++    P +  YN
Sbjct: 376 RVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE----- 569
            +++   +QE +    +L   M  +G+   VVTY TL+      G  + A+         
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKR 495

Query: 570 -------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                              G  D+A+  ++   + G   S    N++I  F + ++  +A
Sbjct: 496 GVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQA 555

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             +   MKE G  PD +TY TL+    +V
Sbjct: 556 QEIFLKMKELGFPPDEITYRTLIDGYCKV 584



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 213/498 (42%), Gaps = 57/498 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+    + E   +AF L           T +TYN L+        +E AL++ + M 
Sbjct: 434 YNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMH 493

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   + + Y  ++ +  +    D +++  ++K+           L N +I GF K   
Sbjct: 494 KRGVAPNEVTYCTLLDAFFKVGTFDRAMM--IWKDALSKGFTKSITLYNTMICGFCKMEK 551

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A       + +G  P   TY  +I      G  +EA  + +  +  G+   T+ YN+
Sbjct: 552 LVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNS 611

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  +   L+    +++EM+   + P+  TY  LI  + + G  + A     +M    
Sbjct: 612 LITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKG 671

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP-DTHFYNV-------------- 445
             PN  I S+I++     G+      +L ++  + ++P   H ++V              
Sbjct: 672 IAPNIIIGSKIVSSLYRHGKIDEANLILHQI--ADIDPIAAHAHSVELPKSDLRHLETQK 729

Query: 446 MIDTFGK------------YN------CLHHAMAAFDRMLSE----GIEPDTITWNTLID 483
           ++D+FGK            YN      C    +    R+LS+    G  PD  T+ +LI 
Sbjct: 730 IVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIH 789

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G+ + A  L ++M   G  P    YN +IN L +    +  +RL   +  +GL P
Sbjct: 790 ACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSP 849

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            VVTY TL+D Y + GR  +A+E    L D+       MR +G+ PS++  ++LI+    
Sbjct: 850 TVVTYNTLIDGYCKGGRTTEALE----LKDK-------MREEGICPSSITYSTLIHGLYM 898

Query: 604 DQRDAEAFAVLQYMKENG 621
           + +  ++  +L  M + G
Sbjct: 899 EGKSEQSVGLLNEMMKAG 916



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/452 (21%), Positives = 193/452 (42%), Gaps = 44/452 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL---- 184
           +++LLKNL      ++ A  + + + K  +  + E+ Y  L+ A  +      A +    
Sbjct: 469 YNTLLKNLFHV-GHVEHALHIWNLMHKRGVAPN-EVTYCTLLDAFFKVGTFDRAMMIWKD 526

Query: 185 -LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            LS+    +   YN +I    + + L +A  +  KM++ G+  D I Y  +I    +   
Sbjct: 527 ALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGN 586

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +L  KL    E D I    ++ N +I G  ++ +  K    L   +   LSP   TY
Sbjct: 587 LVEAL--KLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-- 361
            ++I    + G   +A   + ++ + G+ P     + ++    + G + +A  ++ ++  
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704

Query: 362 -------------------------------ERSGVLP--DEHTYSLLIDAYANAGRWES 388
                                          +++  +P  +   Y++ I     +   + 
Sbjct: 705 IDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDD 764

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
            R +L ++ +    P+++ Y  ++      G+    F +  +M ++G+ P+   YN +I+
Sbjct: 765 VRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALIN 824

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A   F+++  +G+ P  +T+NTLID + K GR   A EL ++M+E G  P
Sbjct: 825 GLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICP 884

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            + TY+ +I+ L  + + E    LL  M   G
Sbjct: 885 SSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 175/388 (45%), Gaps = 49/388 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P T TY  +I A    G    A   F  L+ESG++  T   NALL GY + G L+ A
Sbjct: 178 GLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKA 237

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
            +++  M   G   +E++Y++LI           A ++L  M      PN   Y+ ++ G
Sbjct: 238 CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRG 297

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G       +L EM   GV P    YN MID + K   L  A+     M   G  PD
Sbjct: 298 LCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357

Query: 475 TITWNTLIDCHFKC-GRYDRAEELFEEMQERGYFPCTTT--------------------- 512
             T+N+LI  H  C G+ D AEEL      RG+ P   T                     
Sbjct: 358 DWTYNSLI--HGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVK 415

Query: 513 --------------YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
                         Y ++I++L ++ R ++ K  L  + A GL PNVV YT+++D Y + 
Sbjct: 416 SIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKV 475

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G+   A+E            F++   +G +P+    +SLI    +DQ+  +A A++  M+
Sbjct: 476 GKVGAALE-----------VFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E+G+ P V+TYTTL++   +  +F   F
Sbjct: 525 EDGITPGVITYTTLIQGQCKKHEFDNAF 552



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 240/563 (42%), Gaps = 65/563 (11%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ--------RQRLTPLTYNAL 199
           A++  L +     +Y+ L   +I   G +E + EA    Q        R  L+P  YN  
Sbjct: 95  ALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLA 154

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           + +  R D  E    L S++ Q+G   D + Y+ +I +  +   +  ++  + ++ +   
Sbjct: 155 LRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSL--AIAHRYFRLLRES 212

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +E+D    N +++G+ + GD  KA   L M   +G      +Y  +I  L  +    EA
Sbjct: 213 GMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREA 272

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +   + + G  P    Y  L++G  K G + DA  ++ EM R GV+P   TY+ +ID 
Sbjct: 273 LVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDG 332

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIY------------------------------- 408
           Y  +GR + A  +   ME +   P+ + Y                               
Sbjct: 333 YCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTV 392

Query: 409 ---SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              + I+ GY    +     +V   M SS  + D   Y V+I    K + L  A    + 
Sbjct: 393 ITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNE 452

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           + + G+ P+ + + ++ID + K G+   A E+F+  +  G  P   TY+ +I  L + ++
Sbjct: 453 IFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQK 512

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLS--DQAVN- 577
                 L+  M+  G+ P V+TYTTL+    +   FD+A    E     GL+  +QA N 
Sbjct: 513 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 572

Query: 578 -------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                        A+  +   G+  + +   SL++ F +      A A+++ M   G K 
Sbjct: 573 LTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKA 632

Query: 625 DVVTYTTLMKALIRVDKFHKVFS 647
           D  TY+ L++AL +  K ++  S
Sbjct: 633 DSHTYSVLLQALCKQKKLNEALS 655



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 202/452 (44%), Gaps = 17/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    +Y  LI        + +AL L+  M QDG   +   Y+L+I+ L +  +I  +  
Sbjct: 250 RRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDA-- 307

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           + L  E+    +       N +I G+ K+G    A+    + +G G +P   TY ++I  
Sbjct: 308 RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG 367

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+  EAE +       G  P    +  ++ GY K   + DA  V S M  S    D
Sbjct: 368 LC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD 426

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y +LI       R + A+  L E+  +   PN  IY+ I+  Y   G+     +V K
Sbjct: 427 LQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK 486

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
             +  G  P+   Y+ +I    +   LH AMA   +M  +GI P  IT+ TLI    K  
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +D A  LFE M++ G  P    YN++ + L +  R E+    L     +G++   VTYT
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYT 603

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +LVD + ++G  + A   +E            M  +G K  +   + L+ A  + ++  E
Sbjct: 604 SLVDGFSKAGNTEFAAALIEK-----------MVNEGCKADSHTYSVLLQALCKQKKLNE 652

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A ++L  M   G+K ++V YT ++  +I+  K
Sbjct: 653 ALSILDQMTLRGVKGNIVAYTIIISEMIKEGK 684



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 219/494 (44%), Gaps = 15/494 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + ++ +I+   ++EK+ +A      ++S + +L    Y  LIS   +   L++A + +++
Sbjct: 393 ITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNE 452

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +  +G   + + Y+ +I +  +  K+ ++L  +++K  E +    +    + +I G  + 
Sbjct: 453 IFANGLSPNVVIYTSIIDAYCKVGKVGAAL--EVFKLTEHEGCRPNAWTYSSLIYGLIQD 510

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               KAM  +   Q  G++P   TY  +I           A  +FE ++++GL P  +AY
Sbjct: 511 QKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAY 570

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L     K G    AE   S + + GV+  + TY+ L+D ++ AG  E A  ++++M  
Sbjct: 571 NVLTDALCKSG---RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVN 627

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              K +S  YS +L     + +      +L +M   GV+ +   Y ++I    K     H
Sbjct: 628 EGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDH 687

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F+ M+S G +P  IT+   I  + K GR + A  L  EM+  G  P   TYN+ IN
Sbjct: 688 AKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFIN 747

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-----D 573
             G     +     L  M      PN  TY  L+  + +    +       G+      D
Sbjct: 748 GCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLD 807

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M   GL P+ +  +S+I  F +  R  EA  +L +M    + P+   YT L+
Sbjct: 808 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 867

Query: 634 KALIRVDKFHKVFS 647
           K    +  F K  S
Sbjct: 868 KCCCDIKLFEKAAS 881



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 186/431 (43%), Gaps = 57/431 (13%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           E  Y++L  AL   GR+E+ Y +FL+ +   LT +TY +L+   ++  + E A  L+ KM
Sbjct: 567 EQAYNVLTDALCKSGRAEEAY-SFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKM 625

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             +G   D   YS+++Q+L +  K++                                  
Sbjct: 626 VNEGCKADSHTYSVLLQALCKQKKLN---------------------------------- 651

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+  L      G+      Y  +I+ +   G+   A+++F E+  SG KP    Y 
Sbjct: 652 ---EALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYT 708

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
             +  Y K+G +++A  ++ EMER+GV PD  TY++ I+   + G  + A   LK M  +
Sbjct: 709 VFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDA 768

Query: 400 HAKPNSFIYSRIL----------AGYRD-RGEWQ-----RTFQVLKEMKSSGVEPDTHFY 443
             +PN + Y  +L          A Y D  G W        +Q+L+ M   G+ P    Y
Sbjct: 769 SCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTY 828

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + +I  F K   L  A    D ML + I P+   +  LI C      +++A      M E
Sbjct: 829 SSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIE 888

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G+ P   +Y+ +I  L ++  ++  K L  ++       N V +  L D   ++G  D 
Sbjct: 889 CGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDI 948

Query: 564 AIECLEGLSDQ 574
             + L  + ++
Sbjct: 949 CSQLLSAMENR 959


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 220/481 (45%), Gaps = 47/481 (9%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP----LTYNALISACARNDDLEKALNLMSKM 219
            +YS LI A GRS KL +A  + +  ++      + YNA+I AC++  D   AL +  +M
Sbjct: 157 FVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREM 216

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D I ++ +I +  R N+ +           ECD+I             FA+  
Sbjct: 217 LEQGMSPDRITFNTLISAAGRANRWE-----------ECDRI-------------FAEME 252

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAY 338
           +              G++    TY  +I      G+     A+ E + K SG++P    Y
Sbjct: 253 ER-------------GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITY 299

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + ++ GY K+G   +A  +  EM    V PD   Y+ ++D +A  G ++ A  + + ME 
Sbjct: 300 STMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEE 359

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +    +   Y+ +L  Y  +G+++    +L+EMK  G  P+   Y+ +ID + K+     
Sbjct: 360 AGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRD 419

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AMA F  +   G++PD + ++TL+D   K G  D A  L EEM + G  P   TYN +++
Sbjct: 420 AMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLD 479

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G Q     V++    +R   LLP V         Y Q    D   +  + L   A   
Sbjct: 480 AYGRQCLM--VRKNFPKLRFF-LLPRVTMLLKPSVDYDQQSLVDPKQK--QALVLAAARV 534

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           FR M  +G+KP+ +  +S++NA        +A ++L+ M+    +   VT+  LM   IR
Sbjct: 535 FREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLMGFRIR 594

Query: 639 V 639
           V
Sbjct: 595 V 595



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 13/275 (4%)

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I +    GR + A+++      +    N F+YS ++  Y   G+  +  ++ + MK 
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 184

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
              +P+   YN +ID   K      A+  F  ML +G+ PD IT+NTLI    +  R++ 
Sbjct: 185 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLV 552
            + +F EM+ERG      TYN +I       +      L+  M ++ G+ P+V+TY+T++
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 303

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D Y + G           L+ +A+  F+ MR   ++P  +  N++++         EA +
Sbjct: 304 DGYAKLG-----------LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 352

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + + M+E G   D+VTY  L+ +  +  KF +  S
Sbjct: 353 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 387



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 21/237 (8%)

Query: 419 GEWQRT-----FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+W++      + VL++   S  +  T   + +I + G+      A   FDR +  G   
Sbjct: 98  GQWEKVVKSFDWMVLQQNLRSQWDKVT---STIISSLGRLGRSDWAQLIFDRAVGAGFGN 154

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +   +++LI  + + G+  +A E+FE M+     P    YN +I+   +   +    R+ 
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK-PNLVVYNAVIDACSKGGDYPTALRIF 213

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  QG+ P+ +T+ TL+   G++ R++   EC     D+    F  M   G+   ++ 
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWE---EC-----DRI---FAEMEERGIARDDVT 262

Query: 594 LNSLINAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            N+LI  +    +     A+++ M K +G++P V+TY+T++    ++   H+  + +
Sbjct: 263 YNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 319


>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 793

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 214/473 (45%), Gaps = 25/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y AL+SA +R      A+ +  +M  +G     + Y++V+   ++   +    +  L   
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKI-AVPWKDVVALVDS 239

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++ D I LD    N +I    +     +A +     +  G  P   T+ +++     +  
Sbjct: 240 MKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARM 299

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  V +E++  G  P    YN+L+  YVK G LK+A  +  EME  G+ PD  TY+ 
Sbjct: 300 HDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTT 359

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI     AG+ ++A     EM  +  KPN   Y+ ++  +  RG++     V  +++S+G
Sbjct: 360 LISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAG 419

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   +N ++  FG+          F  M   G  P+  T+ +LI  + +CG +D++ 
Sbjct: 420 FVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSM 479

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+++ M E G +P  +TYN +++ L    RWE  ++L   M      P+ ++Y++L+  Y
Sbjct: 480 EIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAY 539

Query: 556 GQSGRFD-----------DAIECLEG------LSDQAVNAF----RVMRTDGLKPSNL-- 592
             + + D           + IE   G      L +  VN      +     G +  +L  
Sbjct: 540 ANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDI 599

Query: 593 -ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             LN++++ +G+++   +   +L  MK + +     TY +LM    R+    K
Sbjct: 600 NVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEK 652



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 201/468 (42%), Gaps = 50/468 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN+LIS+  ++  L++A  L  +M   G   D I Y+ +I  L R  KID+++    Y
Sbjct: 320 VTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAI--GTY 377

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+  +  + +    N +I      G   + M      +  G  P   T+  ++     +
Sbjct: 378 DEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQN 437

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   E   VF+E+K+SG  P    Y +L+  Y + G    +  +   M  +G+ PD  TY
Sbjct: 438 GLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTY 497

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++ A A  GRWE A  +  EME    +P+   YS +L  Y +  +  +   + +++ +
Sbjct: 498 NAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYA 557

Query: 434 SGVEP-----------------------------------DTHFYNVMIDTFGKYNCLHH 458
             +E                                    D +  N M+  +GK   +  
Sbjct: 558 EKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKK 617

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                  M    I   T T+N+L+  + + G  ++ E +  E++  G  P   +YN MI 
Sbjct: 618 VEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIY 677

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G + + ++  RL   M++ GL+P++VTY   V  Y  +  F++AI+ +          
Sbjct: 678 AYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLV---------- 727

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            R M T G KP+    NS++  +    + A+A + L  + +  L P +
Sbjct: 728 -RYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ--LHPGI 772



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/522 (21%), Positives = 223/522 (42%), Gaps = 54/522 (10%)

Query: 166 YSILIHALGRSEKLYE---AFLLSQRQRLTPL---TYNALISACARNDDLEKALNLMSKM 219
           Y++++H   +    ++   A + S +    PL   TYN LIS C R    ++A  +  +M
Sbjct: 216 YNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEM 275

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G+  D + ++ ++    +    D ++   + KE+E           N +I  + K G
Sbjct: 276 RAAGFEPDKVTFNSLLDVYGKARMHDEAI--GVLKEMELGGCPPSVVTYNSLISSYVKDG 333

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A       +  G+ P   TY  +I+ L  +G+   A   ++E+  +G KP    YN
Sbjct: 334 LLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYN 393

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+K +   G   +   V  ++  +G +PD  T++ L+  +   G       V KEM+ S
Sbjct: 394 ALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKS 453

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y  +++ Y   G + ++ ++ K M  +G+ PD   YN ++    +      A
Sbjct: 454 GYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQA 513

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ----------------- 502
              F  M +    PD +++++L+  +    + D+ + L E++                  
Sbjct: 514 EKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLV 573

Query: 503 ---------------ERGYFPCTTTYNI---MINLLGEQERWEDVKRLLGNMRAQGLLPN 544
                          E G   C+   N+   M+++ G+    + V+ +L  M+   +  +
Sbjct: 574 NSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLS 633

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             TY +L+ +Y    R  D  +C   L++        +++ G +P   + N++I A+G  
Sbjct: 634 TATYNSLMHMYS---RLGDCEKCENILTE--------IKSSGARPDRYSYNTMIYAYGRK 682

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            +  EA  +   MK +GL PD+VTY   +K+ +    F +  
Sbjct: 683 GQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAI 724



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 161/346 (46%), Gaps = 16/346 (4%)

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           A +  L+ +GR  +A A+ +   E    P   AY AL+  + +    +DA  V   M  +
Sbjct: 152 AAVRVLARAGRLADASALLDAAPE----PDASAYTALVSAFSRASRFRDAVAVFRRMVAN 207

Query: 365 GVLPDEHTYSLLIDAYAN-AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           G+ P   TY++++  Y+  A  W+    ++  M+      + + Y+ +++  R    ++ 
Sbjct: 208 GIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKE 267

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +V  EM+++G EPD   +N ++D +GK      A+     M   G  P  +T+N+LI 
Sbjct: 268 AAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLIS 327

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            + K G    A EL EEM+ +G  P   TY  +I+ L    + +        M   G  P
Sbjct: 328 SYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKP 387

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           N+ TY  L+ ++G  G+F + +   + L           R+ G  P  +  N+L+  FG+
Sbjct: 388 NLCTYNALIKLHGVRGKFPEMMAVFDDL-----------RSAGFVPDVVTWNTLLAVFGQ 436

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  D+E   V + MK++G  P+  TY +L+ +  R   F +    Y
Sbjct: 437 NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIY 482



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 171/413 (41%), Gaps = 42/413 (10%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y+ LI  L R+ K+  A      +L    +    TYNALI          + + +   
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +R  G+  D + ++ ++    + N +DS +   ++KE++      +      +I  +++ 
Sbjct: 415 LRSAGFVPDVVTWNTLLAVFGQ-NGLDSEV-SGVFKEMKKSGYVPERDTYVSLISSYSRC 472

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   ++M         G+ P  +TY AV++AL+  GR  +AE +F E++    +P   +Y
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSY 532

Query: 339 NALLKGYV-----------------------------------KMGYLKDAEFVVSEMER 363
           ++LL  Y                                    K+  L + E    E+ R
Sbjct: 533 SSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGR 592

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                D +  + ++  Y      +    +L  M+ S    ++  Y+ ++  Y   G+ ++
Sbjct: 593 RRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEK 652

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +L E+KSSG  PD + YN MI  +G+   +  A   F  M S G+ PD +T+N  + 
Sbjct: 653 CENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVK 712

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +     ++ A +L   M  RG  P   TYN ++       +  D K  L N+
Sbjct: 713 SYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNL 765



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-------ALISACARN-DDLE 210
           C   EL YS L+HA   ++KL +   LS+      +  +        L+++   N  + E
Sbjct: 525 CRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETE 584

Query: 211 KALNLMSKMRQDGYHCDF-INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           KA   + + R     C   IN    + S+   N++   + +++   ++   I L     N
Sbjct: 585 KAFLELGRRR-----CSLDINVLNAMVSVYGKNRMVKKV-EEILSLMKGSSINLSTATYN 638

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            ++  +++ GD  K    L   +  G  P   +Y  +I A    G+  EA  +F E+K S
Sbjct: 639 SLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSS 698

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P    YN  +K YV     ++A  +V  M   G  P+E TY+ ++  Y   G+   A
Sbjct: 699 GLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADA 758

Query: 390 RIVLKEMEVSH 400
           +  L  +   H
Sbjct: 759 KSFLSNLPQLH 769


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 140/548 (25%), Positives = 243/548 (44%), Gaps = 44/548 (8%)

Query: 128 LWHSLLKNLCSSNSSI-DLAYAV---VSWLQKHNLCYS----YELL-----YSILIHALG 174
           LW +  +N+C S S + D+ ++V   +  L++ N C+S    +  L      + L+H L 
Sbjct: 149 LWST--RNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLS 206

Query: 175 RSE--KLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +S   +L   F   ++      +  TYN +I    +  DLE +  L  +MR+ G   D +
Sbjct: 207 KSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 266

Query: 230 NYSLVIQSLTRTNKID--SSLLQKLYKEIEC--DKIELDGQLLNDVIVGFAKAGDASKAM 285
            Y+ +I    +   ++  +SL  ++ K++ C  D I  +G     +I  + K     +A 
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEM-KDVGCVPDIITYNG-----LINCYCKFEKMPRAF 320

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
            +    +  GL P   TY+ +I A    G    A  +  +++ +GL P    Y +L+   
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            K G L +A  ++++M ++GV  +  TY+ L+D    AGR   A  V + M      PN 
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQ 440

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y+ ++ GY      +   ++LK+M    ++PD   Y  +I        L       + 
Sbjct: 441 QVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE 500

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M S GI  + +   T+ID +FK G+   A   F+EMQ+ G      TY ++I+ L E   
Sbjct: 501 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGI 560

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            E        M + GL PNV  YT+L+D             C     + A   F  M+  
Sbjct: 561 VELAVDYFCRMLSLGLQPNVAVYTSLIDGL-----------CXNNCIESAKKLFDEMQCR 609

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+ P   A  +LI+   +     EA  ++  M E  ++ D+  YT+L+    +  + H+ 
Sbjct: 610 GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ- 668

Query: 646 FSSYLFFN 653
             +  FFN
Sbjct: 669 --ARKFFN 674



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 220/474 (46%), Gaps = 18/474 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I  L   G  E     F+  +   L+P  +TYN+LI    +   LE+  +L ++M+
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+ +I    +  K+  +   + + E++ + ++ +    + +I  F K G 
Sbjct: 293 DVGCVPDIITYNGLINCYCKFEKMPRAF--EYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A++ L   +  GL P   TY ++I A   +G   EA  +  ++ ++G+K     Y A
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  K G + +AE V   M + G+ P++  Y+ L+  Y  A R E A  +LK+M   +
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  +Y  I+ G+  + + + T  +L+EMKS G+  +      +ID + K      A+
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M   G+E   +T+  LID   + G  + A + F  M   G  P    Y  +I+ L
Sbjct: 531 NFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                 E  K+L   M+ +G+ P++  +T L+D   + G   +A+  +  +++ A+    
Sbjct: 591 CXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDL 650

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            + T           SL++ F +     +A      M E G+ P+ V    L++
Sbjct: 651 HVYT-----------SLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 195/443 (44%), Gaps = 46/443 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI   G+   L E   L    +     P  +TYN LI+   + + + +A    S+M+
Sbjct: 268 YNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK 327

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + + YS +I +  +   +  ++  KL  ++    +  +      +I    KAG+
Sbjct: 328 NNGLKPNVVTYSTLIDAFCKEGMMQGAI--KLLXDMRRTGLLPNEFTYTSLIDANCKAGN 385

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A + L      G+     TY A++  L  +GR IEAE VF  + + G+ P  + Y A
Sbjct: 386 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY+K   ++DA  ++ +M    + PD   Y  +I  + +  + E  +++L+EM+   
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N  I + I+  Y   G+        +EM+  GVE     Y V+ID   +   +  A+
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565

Query: 461 AAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI- 517
             F RMLS G++P+   + +LID  C   C   + A++LF+EMQ RG  P  T +  +I 
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNC--IESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 518 ------NL----------------------------LGEQERWEDVKRLLGNMRAQGLLP 543
                 NL                              +       ++    M  +G+LP
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683

Query: 544 NVVTYTTLVDIYGQSGRFDDAIE 566
             V    L+  Y + G+ D+AIE
Sbjct: 684 EEVLCICLLREYYKRGQLDEAIE 706



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 158/392 (40%), Gaps = 45/392 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YS LI A  +   +  A  L    R T L     TY +LI A  +  +L +A  L++ M 
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y+ ++  L +  ++  +  +++++ +  D I  + Q+   ++ G+ KA  
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEA--EEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              AM+ L       + P    Y ++I    +  +  E + + EE+K  G+         
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR--------------- 385
           ++  Y K G   DA     EM+  GV     TY +LID    AG                
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575

Query: 386 --------------------WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
                                ESA+ +  EM+     P+   ++ ++ G    G  Q   
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 635

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            ++  M    +E D H Y  ++  F +   LH A   F+ M+ +GI P+ +    L+  +
Sbjct: 636 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 695

Query: 486 FKCGRYDRAEELFEEMQERGY---FPCTTTYN 514
           +K G+ D A EL  EM+   Y   F     YN
Sbjct: 696 YKRGQLDEAIELKNEMERMAYSFEFDAQLAYN 727


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 214/509 (42%), Gaps = 36/509 (7%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNL 215
           HN  +S  L ++ L  AL    ++     L      + + +N L+++ A+        +L
Sbjct: 37  HNRFHSKSLNFNTLDDALSSFNRM-----LHMHPPPSTVDFNRLLTSIAKTKQYPTVFSL 91

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIV 273
            ++M   G   D    +++I S    N++    S+L K+ K       + D      +I 
Sbjct: 92  SNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGH----QPDTATFTTLIR 147

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G    G    A+       G G  P   TY  +I  L   G T  A  +   +++   +P
Sbjct: 148 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 207

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y +++    K   + +A  + S+M   G+ PD  TY+ LI +  N   W+    +L
Sbjct: 208 DVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL 267

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            +M  S   P+  I+S ++      G+      V+  M   GVEP+   YN ++D     
Sbjct: 268 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 327

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + +  A+  FD M+  G  P+ I++NTLI+ + K  R D+A  LFEEM ++   P T TY
Sbjct: 328 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 387

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------- 566
           N +++      R +D   L   M A G +P++ TY  L+D   +    D+A+        
Sbjct: 388 NTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 446

Query: 567 -----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            C  G  + A + F  + + GL+P+      +IN         E
Sbjct: 447 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 506

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  +   M  NG  PD  TY T+ + L++
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 201/459 (43%), Gaps = 14/459 (3%)

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           +   +LS     + L++N   S     + L+ AL+  ++M         ++++ ++ S+ 
Sbjct: 21  FGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIA 80

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +T +  +     L  +++   I  D   LN +I  F        A   L     +G  P 
Sbjct: 81  KTKQYPTVF--SLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPD 138

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           TAT+  +I  L   G+  +A  +F+++   G +P    Y  L+ G  K+G    A  ++ 
Sbjct: 139 TATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLR 198

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            ME+    PD   Y+ +ID+     +   A  +  +M      P+ F Y+ ++    +  
Sbjct: 199 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 258

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           EW+    +L +M +S + PD   ++ ++D   K   +  A    D M+  G+EP+ +T+N
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYN 318

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            L+D H      D A ++F+ M   GY P   +YN +IN   + +R +    L   M  +
Sbjct: 319 ALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 378

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            L+PN VTY TL+      GR  DAI             F  M   G  P       L++
Sbjct: 379 ELIPNTVTYNTLMH-XCHVGRLQDAIA-----------LFHEMVAHGQIPDLATYRILLD 426

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +     EA A+L+ ++ + + PD+  YT ++  + R
Sbjct: 427 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCR 465



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 167/362 (46%), Gaps = 5/362 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y ++I +  ++  + +A NL SKM   G   D   Y+ +I SL   N  +   +  L 
Sbjct: 210 VVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC--NLCEWKHVTTLL 267

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++   KI  D  + + V+    K G  ++A   + M    G+ P   TY A++      
Sbjct: 268 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 327

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  VF+ +  +G  P   +YN L+ GY K+  +  A ++  EM +  ++P+  TY
Sbjct: 328 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 387

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR-DRGEWQRTFQVLKEMK 432
           + L+    + GR + A  +  EM V+H +       RIL  Y   +        +LK ++
Sbjct: 388 NTLMHX-CHVGRLQDAIALFHEM-VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            S ++PD   Y ++ID   +   L  A   F  + S+G+ P+  T+  +I+   + G  D
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +LF EM   G  P   TYN +   L + +      +LL  M A+G   +V T T LV
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565

Query: 553 DI 554
           ++
Sbjct: 566 EM 567



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 8/409 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L    K+ +A  L  +   +   P  +TY  LI+   +  +   A+ L+  M 
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     D + Y+ +I SL +  ++  +    L+ ++    I  D      +I       +
Sbjct: 202 QGNCQPDVVVYTSIIDSLCKDRQVTEAF--NLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                  L       + P    ++ V+ AL   G+  EA  V + +   G++P    YNA
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     + +A  V   M  +G  P+  +Y+ LI+ Y    R + A  + +EM    
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN+  Y+ ++      G  Q    +  EM + G  PD   Y +++D   K + L  AM
Sbjct: 380 LIPNTVTYNTLMHXCH-VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 438

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A    +    ++PD   +  +ID   + G  + A ++F  +  +G  P   TY IMIN L
Sbjct: 439 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +   ++  +L   M   G  P+  TY T+     Q+     AI+ L+
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 189/410 (46%), Gaps = 10/410 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + +L+  LC   ++ + A  ++  +++ N C    ++Y+ +I +L +  ++ EAF L  +
Sbjct: 177 YGTLINGLCKVGNT-NAAIRLLRSMEQGN-CQPDVVVYTSIIDSLCKDRQVTEAFNLFSK 234

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              Q ++P   TY +LI +     + +    L+++M       D + +S V+ +L +  K
Sbjct: 235 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 294

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I  +    +   +    +E +    N ++ G     +  +A++        G +P   +Y
Sbjct: 295 ITEA--HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 352

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I       R  +A  +FEE+ +  L P T  YN L+     +G L+DA  +  EM  
Sbjct: 353 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVA 411

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G +PD  TY +L+D        + A  +LK +E S+  P+  IY+ ++ G    GE + 
Sbjct: 412 HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEA 471

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +   + S G+ P+   Y +MI+   +   L  A   F  M   G  PD  T+NT+  
Sbjct: 472 ARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQ 531

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
              +     RA +L +EM  RG+    +T  +++ +L + +  + VK++L
Sbjct: 532 GLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQIL 581



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 15/335 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A + F  +      P T  +N LL    K         + ++M+  G+ PD +T ++LI
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 378 DAYANAGRWESARIVL-KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +++ +  R   A  VL K +++ H +P++  ++ ++ G    G+      +  +M   G 
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGH-QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 170

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+   Y  +I+   K    + A+     M     +PD + + ++ID   K  +   A  
Sbjct: 171 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF +M  +G  P   TY  +I+ L     W+ V  LL  M    ++P+VV ++T+VD   
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL- 289

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C EG   +A +   +M   G++P+ +  N+L++         EA  V   
Sbjct: 290 ----------CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 339

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLF 651
           M  NG  P+V++Y TL+    ++ +  K  ++YLF
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDK--ATYLF 372



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 11/198 (5%)

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
            +N L  A+++F+RML     P T+ +N L+    K  +Y     L  +M   G  P   
Sbjct: 46  NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 105

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T NI+IN      R      +L  +   G  P+  T+TTL+              C+EG 
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGL-----------CVEGK 154

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
              A++ F  M  +G +P+ +   +LIN   +      A  +L+ M++   +PDVV YT+
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 632 LMKALIRVDKFHKVFSSY 649
           ++ +L +  +  + F+ +
Sbjct: 215 IIDSLCKDRQVTEAFNLF 232



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   + +++ +A  L +   ++ L P  +TYN L+  C     L+ A+ L  +M 
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGR-LQDAIALFHEMV 410

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y +++  L + + +D ++   L K IE   ++ D Q+   VI G  +AG+
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAM--ALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          GL P   TY  +I  L   G   EA  +F E+  +G  P    YN 
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + +G ++      A  ++ EM   G   D  T +LL++   +    +S + +L E
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 224/515 (43%), Gaps = 62/515 (12%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  LISA  +   L +AL+L  +M  DG+  D + YS +I  L +   +  +  + L 
Sbjct: 157 VTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEA--KALL 214

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E++   +  +  +   ++    KAG A ++  +       G+S        +I  L  +
Sbjct: 215 REMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKA 274

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G++ EAEA+F  L +    P    Y A++ GY K+G +  AE ++ +ME+  V+P+  TY
Sbjct: 275 GKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTY 334

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I+ Y   G  + A  ++K+M   +  PN++IY+ ++ G+   G+      +  EMK 
Sbjct: 335 SSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKL 394

Query: 434 SGVEPDTHF-----------------------------------YNVMIDTFGKYNCLHH 458
           +G+E ++                                     Y  ++D F K      
Sbjct: 395 NGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESA 454

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A    ++M   GI+ D + +N LI+   + G+YD AE ++  ++E G  P   TYN MIN
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMIN 513

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL------- 571
              +Q + E+  +L   M+   ++PN +T   LV    ++G  + AI+ L  +       
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 572 -----------------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                            +D  +   + +   GLK +    NSLI           A  VL
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             M + G+  D VTY  L+    +     K  ++Y
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATY 668



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/538 (24%), Positives = 227/538 (42%), Gaps = 55/538 (10%)

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           D A A+   L K N C    + Y+ +I     LG  +         +++++ P  +TY++
Sbjct: 278 DEAEAMFCTLAKLN-CIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSS 336

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I+   +   L+ A+ +M KM       +   Y+ +I    +  K D+++   LY E++ 
Sbjct: 337 IINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAV--DLYNEMKL 394

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
           + +E +  +++  I    +     +A          GL      Y +++     +GR   
Sbjct: 395 NGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESA 454

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  + E++ E+G+K    AYN L+ G +++G   DAE V S +   G+ PD  TY+ +I+
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMIN 513

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           AY   G+ E+A  +  EM+     PNS   + ++ G    GE +R   VL EM   G+ P
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 439 DTHFYNVMIDTFGK-------------------------YNCL----------HHAMAAF 463
           +   +  +++   K                         YN L            A    
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  EGI  DT+T+N LI  HFK    ++A   + +M   G  P   TYN+++  L   
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAA 693

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
                   +L  M+  GL P+   Y TL+  +G+ G              +A+  +  M 
Sbjct: 694 GLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGN-----------KKEAIKFYCEMV 742

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           T GL P     N LI  F +  +  +A  +L  M+   + P+  TY  L+     + K
Sbjct: 743 TKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSK 800



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 231/534 (43%), Gaps = 79/534 (14%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI A  +   L EA  L +        P  +TY+++I+   +   L +A  L+ +M 
Sbjct: 159 YTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMD 218

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G + + + Y++++ SL +      S + +  + I C  +  D  +   +I G  KAG 
Sbjct: 219 KMGVNPNHVVYAILVDSLFKAGSAWESFIYQ-SQMIVCG-VSFDLVVCTTLIDGLFKAGK 276

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + +A         +   P   TY A+I      G    AE++  ++++  + P    Y++
Sbjct: 277 SDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSS 336

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K G L  A  ++ +M    ++P+ + Y+ LID +  AG+ ++A  +  EM+++ 
Sbjct: 337 IINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNG 396

Query: 401 AKPNSFI-----------------------------------YSRILAGYRDRGEWQRTF 425
            + NSFI                                   Y+ ++ G+   G     F
Sbjct: 397 LEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAF 456

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
            + ++M  +G++ D   YNV+I+     GKY+    A + +  +   G+ PD  T+NT+I
Sbjct: 457 TMAEKMAETGIKFDVVAYNVLINGLLRLGKYD----AESVYSGIRELGLAPDRATYNTMI 512

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQERWEDVKRLLGNMRAQ 539
           + + K G+ + A +L+ EM+     P + T NI++  L   GE ER  DV   L  M   
Sbjct: 513 NAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDV---LNEMLLW 569

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQA 575
           G+ PNV  +  L++   +  R D  ++                        C  G++ +A
Sbjct: 570 GICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRA 629

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                 M  +G+    +  N+LI+   +     +A A    M   G+ P + TY
Sbjct: 630 TLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTY 683



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 210/482 (43%), Gaps = 38/482 (7%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           PL +N LI        + +  +L S+M   G   +   +++++ +  +   +  SL   L
Sbjct: 12  PL-WNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHL--SLALDL 68

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            + ++   I++D    N  I GF + G A++   FL +         + T   ++     
Sbjct: 69  IRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 313 SGRTIEAEAVFEELKE--------SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            G     E V + L +        + L+P    Y  L+  Y K   L +A  +  EM   
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G LPD  TYS +I+     G    A+ +L+EM+     PN  +Y+ ++      G    +
Sbjct: 186 GFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWES 245

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           F    +M   GV  D      +ID   K      A A F  +      P+ IT+  +ID 
Sbjct: 246 FIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDG 305

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G  D AE L  +M+++   P   TY+ +IN   ++   +   R++  M  Q ++PN
Sbjct: 306 YCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPN 365

Query: 545 VVTYTTLVDIYGQSGRFDDAIEC-----LEGLSDQA--VNAF-----------------R 580
              Y TL+D + ++G+ D A++      L GL + +  V+AF                 +
Sbjct: 366 AYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCK 425

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M + GL    +   SL++ F +  R++ AF + + M E G+K DVV Y  L+  L+R+ 
Sbjct: 426 YMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLG 485

Query: 641 KF 642
           K+
Sbjct: 486 KY 487



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 213/486 (43%), Gaps = 22/486 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLT--PLTYNALISACARNDDLEKALNLMSKMRQDG 223
           ++IL+HA  +   L  A  L +   +    +TYN  I    +     +    +S M +  
Sbjct: 49  HNILVHAWCKMGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKD 108

Query: 224 YHCDFINYSLVIQSLTRTNKID------SSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
              D    +++++   R   +        +L+  +  +     +E +      +I  + K
Sbjct: 109 TFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCK 168

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
               S+A+         G  P   TY+++I  L   G   EA+A+  E+ + G+ P    
Sbjct: 169 QHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVV 228

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  L+    K G   ++    S+M   GV  D    + LID    AG+ + A  +   + 
Sbjct: 229 YAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLA 288

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
             +  PN+  Y+ ++ GY   G+      +L++M+   V P+   Y+ +I+ + K   L 
Sbjct: 289 KLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLD 348

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+    +ML + I P+   + TLID H K G+ D A +L+ EM+  G    +   +  I
Sbjct: 349 VAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFI 408

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L    + E+ + L   M ++GLL + V YT+L+D + ++GR   A    E +++    
Sbjct: 409 NNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAET--- 465

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGE-DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                   G+K   +A N LIN      + DAE  +V   ++E GL PD  TY T++ A 
Sbjct: 466 --------GIKFDVVAYNVLINGLLRLGKYDAE--SVYSGIRELGLAPDRATYNTMINAY 515

Query: 637 IRVDKF 642
            +  K 
Sbjct: 516 CKQGKL 521



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 197/423 (46%), Gaps = 20/423 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+    ++ +   AF ++++      +   + YN LI+   R    + A ++ S +R
Sbjct: 439 YTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIR 497

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y+ +I +  +  K+++++  KL+ E++   +  +    N ++ G +KAG+
Sbjct: 498 ELGLAPDRATYNTMINAYCKQGKLENAI--KLWNEMKGHSVMPNSITCNILVGGLSKAGE 555

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L      G+ P    + A++ A S   R      + + L   GLK   + YN+
Sbjct: 556 TERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNS 615

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+     +G  K A  V++ M + G+  D  TY+ LI  +  +   E A     +M    
Sbjct: 616 LITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEG 675

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P    Y+ +L G    G   + +++L +MK SG++PD   YN +I   GK      A+
Sbjct: 676 VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAI 735

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
             +  M+++G+ P T T+N LI+   K G+ D+A EL  EMQ R   P ++TY+I+I   
Sbjct: 736 KFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGW 795

Query: 518 -NL--------LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            NL        + ++    + + L   M  +G +P   T   +   + + G   DA   L
Sbjct: 796 CNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHML 855

Query: 569 EGL 571
           + +
Sbjct: 856 KDM 858



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 206/455 (45%), Gaps = 9/455 (1%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK 178
           E  + VP  + +S + N  +    +D+A  ++  +   N+      +Y+ LI    ++ K
Sbjct: 323 EKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNI-MPNAYIYATLIDGHLKAGK 381

Query: 179 LYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
              A  L    +L  L  N     A I+   R   +E+A  L   M   G   D +NY+ 
Sbjct: 382 QDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTS 441

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           ++    +T +  ++    + +++    I+ D    N +I G  + G       + G+ + 
Sbjct: 442 LMDGFFKTGRESAAF--TMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRE- 498

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +GL+P  ATY  +I A    G+   A  ++ E+K   + P +   N L+ G  K G  + 
Sbjct: 499 LGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETER 558

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  V++EM   G+ P+   +  L++A +   R ++   + K +     K N  +Y+ ++ 
Sbjct: 559 AIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLIT 618

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                G  +R   VL  M   G+  DT  YN +I    K + +  A+A + +ML+EG+ P
Sbjct: 619 VLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSP 678

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
              T+N L+      G   +A E+  +M++ G  P  + YN +I+  G+    ++  +  
Sbjct: 679 GIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFY 738

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
             M  +GL+P   TY  L++ + + G+ D A E L
Sbjct: 739 CEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELL 773



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 35/335 (10%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +N L+  +   G +     + SEM   GVLP+  T+++L+ A+   G    A  +
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           ++ +++     ++  Y+  + G+  +G   + F  L  M       D+   N+++  F +
Sbjct: 69  IRNVDID---VDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 453 YNCLHHAMAAFDRMLSE--------GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
              + +     D ++ +         +EP+ +T+ TLI  + K      A  L+EEM   
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD----------- 553
           G+ P   TY+ +IN L ++    + K LL  M   G+ PN V Y  LVD           
Sbjct: 186 GFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWES 245

Query: 554 -IYGQ----SGRFDDAIEC---LEGL-----SDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            IY       G   D + C   ++GL     SD+A   F  +      P+N+   ++I+ 
Sbjct: 246 FIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDG 305

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           + +      A ++L+ M++  + P+VVTY++++  
Sbjct: 306 YCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIING 340


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 232/494 (46%), Gaps = 34/494 (6%)

Query: 165 LYSILI-HALGRSEKLYEAFLLSQRQRLTPLTYNALISAC---ARNDDLEKALNLMSKMR 220
           L SIL+ H   RS +   A L +     T ++YN +IS      R+  L  AL  +++M 
Sbjct: 100 LNSILLSHCALRSLRPALALLRASESADT-VSYNVVISGLTEQGRHGGLAPAL--LAEMC 156

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + G   D +  +  + +L R  +++  ++L + + +  E  ++++ G   N ++ G+ K+
Sbjct: 157 KRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGW--NALLDGYCKS 214

Query: 279 GD------ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           GD      A++ MR     QGVG+      Y  ++  L  +G    A  + E +K  G++
Sbjct: 215 GDMEAALTAAQRMR----TQGVGVD--VVGYNTLVAGLCRAGEADAARGMLETMKGDGVE 268

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    Y   +    +   + DA  +  EM R GVLPD  T S L+D    AGR+  A  +
Sbjct: 269 PNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYAL 328

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +EME   A PN   Y  ++           +  +L E+ S GV  D   Y  ++D  GK
Sbjct: 329 FREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGK 388

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +      F   LS+   P+ +T+  LID   + G  D AE++  EM+++   P   T
Sbjct: 389 QGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVT 448

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           ++ +IN L +Q         +  M+ +G+ PNVVTY T++D +          +C E   
Sbjct: 449 FSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGF---------FKCQE--Q 497

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           + A++ +  M  +G++ +   ++ L+N   ++ +  EA A+ + M + G+  D V YTTL
Sbjct: 498 ESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTL 557

Query: 633 MKALIRVDKFHKVF 646
           +  L ++      F
Sbjct: 558 IDGLFKMGNMPAAF 571



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 34/393 (8%)

Query: 297 SPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           S  T +Y  VI+ L+  GR    A A+  E+ + G+       N  L    + G ++ A 
Sbjct: 125 SADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAA 184

Query: 356 FVVSEMERSGVLP--DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            +   M R   +   D   ++ L+D Y  +G  E+A    + M       +   Y+ ++A
Sbjct: 185 ALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVA 244

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G    GE      +L+ MK  GVEP+   Y   I    + N +  A + ++ M+  G+ P
Sbjct: 245 GLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLP 304

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T + L+D   + GR+  A  LF EM++ G  P   TY  +I+ L +  R  +   LL
Sbjct: 305 DVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLL 364

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
           G + ++G++ ++V YT+L+D  G+ G+ D+  +                        C  
Sbjct: 365 GEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRA 424

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G  D A      M    + P+ +  +S+IN   +     +A   ++ MKE G+ P+VVTY
Sbjct: 425 GNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTY 484

Query: 630 TTLMKALIR-------VDKFHKVFSSYLFFNIY 655
            T+M    +       +D +H++    +  N +
Sbjct: 485 GTVMDGFFKCQEQESALDLYHEMLCEGVEVNKF 517



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/493 (22%), Positives = 216/493 (43%), Gaps = 21/493 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ ++  L        LA A+++ + K  + +    + + L+ AL R  ++  A  L++ 
Sbjct: 131 YNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALV-ALCRDGQVEGAAALAEM 189

Query: 189 -------QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
                   RL  + +NAL+    ++ D+E AL    +MR  G   D + Y+ ++  L R 
Sbjct: 190 MVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRA 249

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            + D++  + + + ++ D +E +       I    +      A         +G+ P   
Sbjct: 250 GEADAA--RGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVV 307

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T +A++  L  +GR  EA A+F E+++ G  P    Y  L+    K     ++  ++ E+
Sbjct: 308 TLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEV 367

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              GV+ D   Y+ L+D     G+ +  + +       +  PN   Y+ ++      G  
Sbjct: 368 VSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNV 427

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               Q+L EM+   V P+   ++ +I+   K   L  A     +M   GI+P+ +T+ T+
Sbjct: 428 DGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTV 487

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +D  FKC   + A +L+ EM   G        ++++N L +  + E+ + L  +M  +G+
Sbjct: 488 MDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGM 547

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           L + V YTTL+D   + G    A +  + L+++            L P  +  N  +N  
Sbjct: 548 LLDHVNYTTLIDGLFKMGNMPAAFKVGQELTER-----------NLSPDAVVYNVFVNCL 596

Query: 602 GEDQRDAEAFAVL 614
               +  EA ++L
Sbjct: 597 CMLGKSKEAESIL 609


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 226/480 (47%), Gaps = 18/480 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSK 218
            +++ L+HA   +  +  A   ++  +     LT +TY+ LIS   + +D + A NL  +
Sbjct: 313 FVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKE 372

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            + +    + I YS +I +  ++  +D +  ++L  E+E D I+      + ++ G+   
Sbjct: 373 AKTNLGDLNGIIYSNIIHAHCQSGNMDRA--EELVHEMEEDGIDAPIDAYHSMMHGYTII 430

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D  K +      +    +P   +Y  +I      G+  +A A+ +E++ SG+K   K Y
Sbjct: 431 QDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTY 490

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ G++ +    +A  +  EM +SG+ PD   Y+LLI+A+   G  + A  +L++M+ 
Sbjct: 491 SMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQK 550

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P++  +  I+ G+   G+ +R   +L  M+ SG  P    YN +I    + N +  
Sbjct: 551 ERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVER 610

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++  ++M   GI P+  T+  ++  +   G   +A E F +++E G       Y  ++ 
Sbjct: 611 AVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLR 670

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R +    +   M +Q +  N   Y  L+D + + G   D  E        A + 
Sbjct: 671 ACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRG---DVWE--------AADL 719

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+ DG+ P+     S INA  +      A  V+  M + GLKP++ TYTTL+K   R
Sbjct: 720 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWAR 779



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 225/499 (45%), Gaps = 28/499 (5%)

Query: 155 KHNLCYSYELLYSILIHA------LGRSEKLYEAFLLSQRQRLTPL-TYNALISACARND 207
           K NL     ++YS +IHA      + R+E+L     + +     P+  Y++++       
Sbjct: 374 KTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHE--MEEDGIDAPIDAYHSMMHGYTIIQ 431

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           D +K L +  ++++  +    I+Y  +I    +  K+  ++   + KE+E   I+ + + 
Sbjct: 432 DEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAI--AISKEMESSGIKHNNKT 489

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            + +I GF    D + A R        GL P  A Y  +I A    G    A  + E+++
Sbjct: 490 YSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ 549

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  ++P  +A+  +++G+   G +K A  ++  M RSG  P   TY+ LI       + E
Sbjct: 550 KERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVE 609

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  VL +M ++   PN   Y+ I+ GY   G+  + F+   ++K  G++ D + Y  ++
Sbjct: 610 RAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLL 669

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   +  A+A    M S+ I  +T  +N LID   + G    A +L ++M+E G  
Sbjct: 670 RACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 729

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY   IN   +    +  + ++  M   GL PN+ TYTTL+  + ++         
Sbjct: 730 PNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARA--------- 780

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENG 621
              L D+A+  F  M+  GLKP   A + L+ +        E        +V + M EN 
Sbjct: 781 --SLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFEND 838

Query: 622 LKPDVVTYTTLMKALIRVD 640
           L  D+ T     + L +++
Sbjct: 839 LTVDMRTAVHWSRWLHKIE 857



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/459 (22%), Positives = 185/459 (40%), Gaps = 59/459 (12%)

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D    +  ++ +    IE +  +   ++  +A A D   A+      +  G+     TY+
Sbjct: 292 DKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYS 351

Query: 305 AVITALS-----------------------------------NSGRTIEAEAVFEELKES 329
            +I+                                       SG    AE +  E++E 
Sbjct: 352 ILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEED 411

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+     AY++++ GY  +   K    V   ++     P   +Y  LI+ Y   G+   A
Sbjct: 412 GIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKA 471

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + KEME S  K N+  YS +++G+    ++   F++ +EM  SG++PD   YN++I+ 
Sbjct: 472 IAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEA 531

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F K   +  A+   ++M  E ++P    +  +I+     G   RA ++ + M+  G  P 
Sbjct: 532 FCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPT 591

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TYN +I+ L  + + E    +L  M   G+ PN  TYT ++  Y  +G    A E   
Sbjct: 592 VMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFT 651

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C  G    A+   R M +  +  +    N LI+ +    
Sbjct: 652 KIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRG 711

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              EA  +++ MKE+G+ P++ TYT+ + A  +     +
Sbjct: 712 DVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 750



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +I   +  G    A A FE ++  G++P    + +L+  Y     ++ A   
Sbjct: 275 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 334

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             EM+  G+     TYS+LI  +      +SA  + KE + +    N  IYS I+  +  
Sbjct: 335 TEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQ 394

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G   R  +++ EM+  G++     Y+ M+  +         +  F+R+      P  I+
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A  + +EM+  G      TY+++I+       + +  R+   M 
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  L++ + + G  D AI  LE            M+ + ++PSN A   +
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEK-----------MQKERMQPSNRAFRPI 563

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  F        A  +L  M+ +G  P V+TY  L+  LIR ++  +  S
Sbjct: 564 IEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVS 613



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 46/273 (16%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+   +  ++  Y  RG+        + M++ G+EP+   +  ++  +     +  A++
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333

Query: 462 AFDRMLSEGIEPDTITWNTLID-----------------------------------CHF 486
             + M +EGIE   +T++ LI                                     H 
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  DRAEEL  EM+E G       Y+ M++     +  +    +   ++     P+++
Sbjct: 394 QSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 453

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +Y  L+++Y + G+   AI     +S +       M + G+K +N   + LI+ F     
Sbjct: 454 SYGCLINLYVKIGKVAKAI----AISKE-------MESSGIKHNNKTYSMLISGFIHLHD 502

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
              AF + + M ++GL+PD   Y  L++A  ++
Sbjct: 503 FTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKM 535


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 248/561 (44%), Gaps = 56/561 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + +++K LC +   ID A+A+++ L++  +     + Y++L+ AL +S ++ EAF L  R
Sbjct: 214 YTAMIKALCRAGE-IDAAFAMLAELRRSGI-QPTVVTYNVLMDALCKSGRVEEAFRLKGR 271

Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMR-------------QDGYHC---- 226
               R+ P  +T+  LIS  AR     +   ++ +M+               G+HC    
Sbjct: 272 MVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGH 331

Query: 227 ------------------DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
                               + Y+L+ ++L +  +++ +  +K+  E+    + +   L 
Sbjct: 332 CSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHA--EKILDEMLLAGMMVHCSLF 389

Query: 269 NDVIVGFAKA-GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N V+    +  G     +R +       L P  A   A I  L  SG+  EA  ++ ++ 
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
             GL       NAL+ G  +   +K+A  V+  M  SGV  D  TY+++I     A + +
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +  +M     KP+ F ++  L  Y + G+ +    +L +MKS G++PD   Y  +I
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D + K   +H A      ++  G+ P+ + +N LI  + + G    A  + + M+  G  
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYN ++  +      E+VK +      + +   V+ YT ++  + + G+ D     
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKID----- 684

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +AV  F+ M + G+ P+ +   +L+ A+ +     EA  +   M   G+ PD V
Sbjct: 685 ------EAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSV 738

Query: 628 TYTTLMKALIRVDKFHKVFSS 648
           +Y TL+     VD   K+  S
Sbjct: 739 SYNTLISGFCEVDSLDKMVES 759



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 51/466 (10%)

Query: 163 ELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E++Y+ +I    R     EA      ++S+  + T +TYN +  A  +  ++E A  ++ 
Sbjct: 316 EVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILD 375

Query: 218 KMRQDG--YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +M   G   HC   N S+V   L  T ++D  L+ +L +E+    ++ +  L+   I   
Sbjct: 376 EMLLAGMMVHCSLFN-SVVAWHLRGTGRLD--LVLRLIREMLARFLKPNDALMTACIQEL 432

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K+G   +A        G GL    AT  A+I  L       EA  V + +  SG++   
Sbjct: 433 CKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDR 492

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN +++G  K   + +A  +  +M + G  PD  T+++ +  Y N G+ E    +L +
Sbjct: 493 ITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQ 552

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M+    KP+   Y  I+ GY    +  +  + L E+  +G+ P+   YN +I  +G+   
Sbjct: 553 MKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGN 612

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLI--DCH---------------------------- 485
           +  A+   D M   GI+P  +T+N+L+   CH                            
Sbjct: 613 ISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTI 672

Query: 486 -----FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
                 K G+ D A   F+EM  RG  P   TY  ++    +    E+  +L   M + G
Sbjct: 673 IIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLG 732

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++P+ V+Y TL+  + +    D  +E    +S Q      V++ DG
Sbjct: 733 IVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQ------VLKQDG 772



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 161/393 (40%), Gaps = 26/393 (6%)

Query: 278 AGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
            G    A +  G M  G  ++P   TY A+I AL  +G    A A+  EL+ SG++P   
Sbjct: 188 GGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVV 247

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YN L+    K G +++A  +   M    V P   T+ +LI   A   ++     VL+EM
Sbjct: 248 TYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM 307

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +     PN  IY+ ++  +  +G      ++  EM S G++     YN++     K   +
Sbjct: 308 QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEM 367

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFK-CGRYDRAEELFEEMQERGYFPCTTTYNI 515
            HA    D ML  G+      +N+++  H +  GR D    L  EM  R   P       
Sbjct: 368 EHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA 427

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            I  L +  + E+   +   +  +GL  NV T   L+    Q     +A + L+ + +  
Sbjct: 428 CIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSG 487

Query: 576 VNAFRV--------------------MRTD----GLKPSNLALNSLINAFGEDQRDAEAF 611
           V   R+                    +R D    G KP     N  ++ +    +  E  
Sbjct: 488 VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEIL 547

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +L  MK  GLKPD+VTY T++    +    HK
Sbjct: 548 HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHK 580



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 161/359 (44%), Gaps = 7/359 (1%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           L +  I  L +S K  EA      +L +   +   T NALI    + +++++A  ++  M
Sbjct: 424 LMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAM 483

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   D I Y+++IQ   + +K+D ++  +L  ++     + D    N  +  +   G
Sbjct: 484 VNSGVELDRITYNIMIQGCCKASKMDEAI--QLRDDMIKRGFKPDLFTFNIFLHTYCNLG 541

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              + +  L   +  GL P   TY  +I     +    +A     EL ++GL+P    YN
Sbjct: 542 KVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYN 601

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           AL+ GY + G + DA  ++  M+ +G+ P   TY+ L+    +AG  E  + V  +  V 
Sbjct: 602 ALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVK 661

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +     Y+ I+ G+   G+        KEM S G+ P+   Y  ++  + K      A
Sbjct: 662 DIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEA 721

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
              FD M+S GI PD++++NTLI    +    D+  E   EM  +       +YN  ++
Sbjct: 722 SKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVT 547
           G   RA + F E+  RG  P   T +I++  LG   + +  +++ G MR  + + P+V T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           YT ++    ++G  D A   L  L           R  G++P+ +  N L++A  +  R 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAEL-----------RRSGIQPTVVTYNVLMDALCKSGRV 262

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            EAF +   M E  ++P +VT+  L+  L R  +F +V
Sbjct: 263 EEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 196/436 (44%), Gaps = 16/436 (3%)

Query: 203  CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
            C + DD   A +L  +M Q       ++++ V+  + + NK D  ++  LY ++E   I 
Sbjct: 582  CIKFDD---AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD--IVIYLYHKMENLGIS 636

Query: 263  LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
             D      +I  F +    S A+  LG    +G  P   T  +++       R  EA ++
Sbjct: 637  HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 696

Query: 323  FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
             + +   G  P    YN ++ G  K   L +A  V   ME+ G+  D  TY+ LI   +N
Sbjct: 697  VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 756

Query: 383  AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            +GRW  A  +L++M      PN   ++ ++  +   G       + KEM    V P+   
Sbjct: 757  SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 816

Query: 443  YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
            YN +I+ F  + CL  A   FD M+S+G  PD +T+NTLI    K  R +   +LF EM 
Sbjct: 817  YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 876

Query: 503  ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             +G      TYN +I+   +  +    +++   M   G+ P++VTY  L+D    +G+ +
Sbjct: 877  YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 936

Query: 563  DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
             A+  +E L    ++              +  N +I       +  EA+ + + +   G+
Sbjct: 937  KALVMVEDLQKSEMDV-----------DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 623  KPDVVTYTTLMKALIR 638
            KPD + Y T++  L R
Sbjct: 986  KPDAIAYITMISGLCR 1001



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 11/364 (3%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F +    S A+  LG    +G  P   T+ +++       R  +A ++   + +SG +P 
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              YN L+ G  K G L  A  +++EME+ G+  D  TY+ L+     +GRW  A  +L+
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +M      P+   ++ ++  +  +G      ++ KEM  S V+P+   YN +I+    + 
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L+ A   FD M S+G  P+ +T+NTLI    K    D   +LF+ M   G+     TYN
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +I+   +  +      +   M ++ + P+++T+  L  ++G          C+ G  + 
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCIL--LHGL---------CVNGEIES 404

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A+  F  MR        +A N +I+   +  +  +A+ +   +   G+KPD  TYT ++ 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 635 ALIR 638
            L +
Sbjct: 465 GLCK 468



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 11/418 (2%)

Query: 147  YAVVSWL--QKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNA 198
            + +V +L  +  NL  S++L  ++ILIH   R  +L  A  L  +      R + +T  +
Sbjct: 620  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 679

Query: 199  LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
            L++   + +  ++A++L+  M   G+  + + Y+ VI  L +   ++++L  +++  +E 
Sbjct: 680  LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL--EVFYCMEK 737

Query: 259  DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
              I  D    N +I G + +G  + A R L       + P    + A+I      G  +E
Sbjct: 738  KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 797

Query: 319  AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
            A  +++E+    + P    YN+L+ G+   G L DA+++   M   G  PD  TY+ LI 
Sbjct: 798  ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 857

Query: 379  AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
             +  + R E    +  EM       ++F Y+ ++ GY   G+     +V   M   GV P
Sbjct: 858  GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 917

Query: 439  DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
            D   YN+++D       +  A+   + +    ++ D IT+N +I    +  +   A  LF
Sbjct: 918  DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977

Query: 499  EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT-TLVDIY 555
              +  +G  P    Y  MI+ L  +    +  +L   M+  G +P+   Y  TL D Y
Sbjct: 978  RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 1035



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 189/463 (40%), Gaps = 18/463 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-YNALISACARNDDLEKALNLMSKMRQ 221
           E L +  +H++   +     F +   Q L  +  +  L++A A     E  +    KM  
Sbjct: 40  EKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL 99

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            G   D  +++++I    R +++  +L  L K+ K      I   G LL+    GF    
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLH----GFCLVN 155

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A   + +    G  P    Y  +I  L  +G    A  +  E+++ GL      YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL G    G   DA  ++ +M +  + PD  T++ LID +   G  + A+ + KEM  S
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN+  Y+ I+ G    G      +    M S G  P+   YN +I  F K+  +   
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           M  F RM  EG   D  T+NTLI  + + G+   A ++F  M  R   P   T+ I+++ 
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L      E       +MR       +V Y  ++    ++ + + A E            F
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE-----------LF 444

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
             +  +G+KP       +I    ++    EA  +++ MKE G+
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 11/355 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+S    ++  +I       R   A +V  ++ + G +P    + +LL G+  +  + DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +V  M +SG  P+   Y+ LID     G    A  +L EME      +   Y+ +L G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G W    ++L++M    + PD   +  +ID F K   L  A   +  M+   ++P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+N++I+     GR   A++ F+ M  +G FP   TYN +I+   +    ++  +L  
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G   ++ TY TL+  Y Q G+   A++            F  M +  + P  +  
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALD-----------IFCWMVSRRVTPDIITH 389

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             L++    +     A      M+E+     +V Y  ++  L + DK  K +  +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 24/326 (7%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G++     +DA  +  EM  S  LP    ++ L+ A AN  R+E+     ++ME+  
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              + + ++ ++  +           VL +M   G EP    +  ++  F   N +  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           +    M+  G EP+ + +NTLID   K G  + A EL  EM+++G      TYN ++  L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------- 566
               RW D  R+L +M  + + P+VVT+T L+D++ + G  D+A E              
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C+ G    A   F +M + G  P+ +  N+LI+ F + +   E   + Q 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M   G   D+ TY TL+    +V K 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKL 367



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 123/548 (22%), Positives = 237/548 (43%), Gaps = 38/548 (6%)

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
           S R  P  + H +L +    N  I+ A      +++    Y   + Y+I+IH L +++K+
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK-YIGIVAYNIMIHGLCKADKV 437

Query: 180 YEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            +A+ L  R  +  +     TY  +I    +N    +A  L+ +M+++G  C        
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDH 497

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           ++  + +NK  S  L+++++  + +   +  Q L  + + F+ +        +L + +G 
Sbjct: 498 LEEHSSSNKEISLSLREIWERSKSNPFWM--QRL--IPIAFSSSVKGFVRRHYLLLERGN 553

Query: 295 GLSPKTATYAAVITA---------LSNSGRTI---EAEAVFEELKESGLKPRTKAYNALL 342
             +P+T+   +   A         L N    I   +A ++F E+ +S   P    +  +L
Sbjct: 554 --NPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVL 611

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               KM       ++  +ME  G+  D +++++LI  +    R   A  +L +M     +
Sbjct: 612 TVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFR 671

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+      +L G+     +Q    ++  M   G  P+   YN +I+   K   L++A+  
Sbjct: 672 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 731

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  M  +GI  D +T+NTLI      GR+  A  L  +M +R   P    +  +I+   +
Sbjct: 732 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 791

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           +    + + L   M  + ++PNV TY +L++ +           C+ G    A   F +M
Sbjct: 792 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF-----------CIHGCLGDAKYMFDLM 840

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            + G  P  +  N+LI  F + +R  +   +   M   GL  D  TY TL+    +  K 
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 643 H---KVFS 647
           +   KVF+
Sbjct: 901 NVAQKVFN 908



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 11/384 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-------TYNALISACARNDDLEKALNLMSK 218
           ++ILIH   R  +L  +F LS   ++  L       T+ +L+      + +  A +L+  
Sbjct: 109 FTILIHCFCRCSRL--SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + GY  + + Y+ +I  L +  +++ +L  +L  E+E   +  D    N ++ G   +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIAL--ELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G  S A R L       ++P   T+ A+I      G   EA+ +++E+ +S + P    Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+++ G    G L DA+     M   G  P+  TY+ LI  +      +    + + M  
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                + F Y+ ++ GY   G+ +    +   M S  V PD   + +++        +  
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  FD M         + +N +I    K  + ++A ELF  +   G  P   TY IMI 
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464

Query: 519 LLGEQERWEDVKRLLGNMRAQGLL 542
            L +     +   L+  M+ +G++
Sbjct: 465 GLCKNGPRREADELIRRMKEEGII 488


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 200/454 (44%), Gaps = 15/454 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN LI    R  D+ + + L+ +M   G     + Y  ++  L R   ++   +  L  E
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEK--IASLLSE 354

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   ++  + Q+ N VI    K   AS+A+  L      G  P   T++ +I+ L   GR
Sbjct: 355 MRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGR 414

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EAE +  E     L P   +Y +L+ G+   G +  A  ++ EM   G  PD  T+  
Sbjct: 415 VQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGA 474

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI     AG+   A +V ++M      P++ IY+ +++G   +        +++EM    
Sbjct: 475 LIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQN 534

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V PD + Y  +ID F +   L  A   F+ M  +GI PD + +N +I  + + G  + A 
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E    M++ G  P   TY  +I    +Q        LL +M  +   PNVV Y++L++ Y
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + G   DA ECL          F  M + GL P+ +    LI +  +  +   A    +
Sbjct: 655 CKLGD-TDAAECL----------FGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFE 703

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           YM  N   P+  T  +L+  L   +    + SS+
Sbjct: 704 YMLLNQCSPNDYTLHSLVTGL--CNSMASIISSH 735



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 222/527 (42%), Gaps = 46/527 (8%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + Y++LI    R   +    LL    + + L P  +TY  L+S   R  DLEK  
Sbjct: 290 CVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIA 349

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L+S+MR+     +   Y+ VI +L +      +L+  + K++     + D    + +I 
Sbjct: 350 SLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALV--VLKQMFAGGCDPDAITFSTLIS 407

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G   +A R L       L+P  ++Y ++I      G  I A  +  E+ E G  P
Sbjct: 408 GLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTP 467

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               + AL+ G V  G + +A  V  +M    +LPD + Y++LI          +AR ++
Sbjct: 468 DVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLI 527

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +EM   +  P+ ++Y+ ++ G+          ++ + M+  G+ PD   YN MI  + ++
Sbjct: 528 EEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQF 587

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             ++ A+     M   G  PD  T+ TLI  + K G    A  L  +M +R   P    Y
Sbjct: 588 GMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAY 647

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD------------------IY 555
           + +IN   +    +  + L G+M +QGL PNV+TYT L+                   + 
Sbjct: 648 SSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLL 707

Query: 556 GQSGRFDDAIECL-EGLSDQA--------------------VNAFRVMRTDGLKPSNLAL 594
            Q    D  +  L  GL +                      ++ FR +  D   P N A 
Sbjct: 708 NQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAY 767

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           N++I +        EA  +   M   G KPD  T+ +L+     V K
Sbjct: 768 NAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 190/476 (39%), Gaps = 83/476 (17%)

Query: 250 QKLYKEIECDK---------IELDGQLL--------------------------NDVIVG 274
           +KLY E+  ++         + + G  L                          N +I G
Sbjct: 244 RKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDG 303

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           + + GD  + +  LG  +  GL P   TY  +++ L   G   +  ++  E++E  L P 
Sbjct: 304 YCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPN 363

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
            + YN+++    K      A  V+ +M   G  PD  T+S LI      GR + A  +L+
Sbjct: 364 VQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLR 423

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------------------- 435
           E       PN   Y+ ++ G+  RGE      +L EM   G                   
Sbjct: 424 ETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAG 483

Query: 436 ----------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                           + PD + YNV+I    K   L  A    + ML + + PD   + 
Sbjct: 484 QVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYT 543

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID   +    D A ++FE M+++G  P    YN MI    +     +    +  MR  
Sbjct: 544 TLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV 603

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G +P+  TYTTL+  Y + G    A+  L  +  +             +P+ +A +SLIN
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRC-----------QPNVVAYSSLIN 652

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK--VFSSYLFFN 653
            + +      A  +   M+  GL P+V+TYT L+ +L + DK  +  ++  Y+  N
Sbjct: 653 GYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLN 708



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 28/376 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTPLT--YNALISACARNDDLEKALNLMSKMR 220
           +  LIH L  + ++ EA L+ ++   ++L P    YN LIS   +   L  A NL+ +M 
Sbjct: 472 FGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEML 531

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +   H D   Y+ +I    R   +D +  +K+++ +E   I  D    N +I G+ + G 
Sbjct: 532 EQNVHPDKYVYTTLIDGFIRNESLDEA--RKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A+  +   + VG  P   TY  +I   +  G    A ++  ++ +   +P   AY++
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSS 649

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K+G    AE +   ME  G+ P+  TY++LI +     +   A +  + M ++ 
Sbjct: 650 LINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQ 709

Query: 401 AKPNSFIYSRILAGY------------------RDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             PN +    ++ G                     +G     F+ L   +    +P    
Sbjct: 710 CSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDR---CDPRNSA 766

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I +   +N L  A+   ++M ++G +PD+ T+ +L+      G+      +     
Sbjct: 767 YNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEF 826

Query: 503 ERGYFPCTTTYNIMIN 518
           +R      + Y I+ +
Sbjct: 827 QRDELEVASRYKILFD 842



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 15/339 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLK---PRTKAYNALLKGYVKMGY-LKDAEFVV 358
           ++A++  L+ +GR    +A   ++  +G     P      AL+  Y   G   K AE   
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
              E  G LP     + L+       RW+ AR +  EM    +  + +    ++ G    
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G  ++  ++++    +G  P+  FYNV+ID + +   +   +     M ++G+ P  +T+
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            TL+    + G  ++   L  EM+ER   P    YN +I+ L +         +L  M A
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G  P+ +T++TL+    Q GR  +A   L   +   +N           P+  +  SLI
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN-----------PNLSSYTSLI 441

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           + F        A  +L  M E G  PDVVT+  L+  L+
Sbjct: 442 HGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 12/176 (6%)

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQER-GYFPCTTTYNIMINLLGEQERWEDVKR 531
           P       L+  +   G   +A E+ +  +E  G  P  T  N ++ LL E+ RW+D ++
Sbjct: 186 PTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARK 245

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M A+        Y+T V + G          CLEGL ++ +         G  P+ 
Sbjct: 246 LYDEMLAEE--SGADDYSTCVMVRGL---------CLEGLVEKGLKLIEARWGAGCVPNA 294

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +  N LI+ +           +L  M+  GL P VVTY TLM  L R     K+ S
Sbjct: 295 VFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIAS 350


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 232/498 (46%), Gaps = 33/498 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I  L +++K+ ++FLL Q   R  + P   TY  LI +  +   +E+A +   +MR
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+ ++ +  ++ ++  +    ++  +       +    + +I G  KAG+
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQLIQA--HDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572

Query: 281 ASKAM----RFLGMAQGV------------GLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA     + +G +  V             ++P   TY A+I  L  + +  +A  + +
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +  +G +P    Y+AL+ G+ K+G + +A+ V   M + G LP  HTY+ LID     G
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL EM      PN   Y+ ++ G    GE ++   +L  M+  G  P+   Y 
Sbjct: 693 RLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYT 752

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID  GK      ++  F +M S+G  P+ +T+  LI+     G  D A  L +EM+  
Sbjct: 753 ALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHT 812

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +      Y+  +   G  +++     LL  M +   +P    Y  L+D + ++GR + A
Sbjct: 813 HWPKHLQGYHCAVQ--GFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E  + L +  V++   M + G+        SLI A     +  EAF +   M   G+ P
Sbjct: 871 LELHKELVE--VSSSLNMTSTGMYA------SLIQALCLASQVEEAFTLYTEMTRKGIVP 922

Query: 625 DVVTYTTLMKALIRVDKF 642
           D++ + +L+K LI V+K+
Sbjct: 923 DLIVFVSLVKGLIEVNKW 940



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 215/539 (39%), Gaps = 86/539 (15%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R + +TYNAL+   A    +E    +  +M   G+  D        Q+L +  +   +L 
Sbjct: 201 RPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADAL- 259

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                 +E +   LD  L   +I G  +A   ++AM FL   +     P   TY  +++ 
Sbjct: 260 ----NMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSG 315

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
                +    + +   +   G  P    +N+L+ GY   G    A  + + M   G  P 
Sbjct: 316 FLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPG 375

Query: 370 EHTYSLLIDAYAN-----------------------------------------AGRWES 388
              Y++ I +                                             G++E 
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEK 435

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LKEM      P++  Y++++       + +++F + +EMK +GV PD + Y ++ID
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +F K   +  A + FD M S G  P+ +T+  L+  + K  +  +A ++F  M +   +P
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555

Query: 509 CTTTYNIMINLL---GE-QERWEDVKRLL---GNMRAQ---------GLLPNVVTYTTLV 552
              TY+ +I+ L   GE Q+  E  ++L+   GN+ +           + PNVVTY  L+
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D   ++ +  DA E                        C  G  D A   F  M   G  
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL 675

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           PS     SLI+   +D R   A  VL  M  +   P+VVTYT ++  L +V +  K  +
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 184/441 (41%), Gaps = 55/441 (12%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++L +EI  D  E+  +LLN ++    + G   +A+  LG  +  G  P   TY A++  
Sbjct: 154 ERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQV 213

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+++G+      V +E+  SG            +   K+G   DA   ++ +E+     D
Sbjct: 214 LASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLD 270

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
               + +I     A  +  A   L  M  +   PN   Y  +L+G+  + ++    +++ 
Sbjct: 271 TVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIIN 330

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID------ 483
            M + G  P+   +N ++  +       +A   F+RM + G  P  + +N  I       
Sbjct: 331 MMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390

Query: 484 -----------------------------------CHFKCGRYDRAEELFEEMQERGYFP 508
                                              C    G++++A ++ +EM  +G+ P
Sbjct: 391 ELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVP 450

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            T+TY  +I  L + ++ E    L   M+  G+ P+V TYT L+D +           C 
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF-----------CK 499

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
            GL +QA + F  MR+ G  P+ +   +L++A+ + ++  +A  +   M +    P+ VT
Sbjct: 500 AGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVT 559

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           Y+ L+  L +  +  K    Y
Sbjct: 560 YSALIDGLCKAGEIQKACEVY 580



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 148/340 (43%), Gaps = 12/340 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI  L +++K+ +A      +L+       + Y+ALI    +   ++ A  +  +M 
Sbjct: 611 YGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY      Y+ +I  + +  ++D  L  K+  E+  D    +      +I G +K G+
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLD--LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+  L + +  G SP   TY A+I  L  +G+   +  +F+++   G  P    Y  
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+      G L +A  ++ EM+ +        Y   +  ++   ++ ++  +L+EME   
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHE 846

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEM---KSSGVEPDTHFYNVMIDTFGKYNCLH 457
             P + +Y  ++  +   G  +   ++ KE+    SS     T  Y  +I      + + 
Sbjct: 847 TVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVE 906

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            A   +  M  +GI PD I + +L+    +  ++D A +L
Sbjct: 907 EAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 147/397 (37%), Gaps = 63/397 (15%)

Query: 287 FLGMAQGVGLSPKTATYAAV--ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           FL   + VG S   A Y A+  I    +  RT  AE +  E+ E   +   +  N L++ 
Sbjct: 121 FLWAERQVGYSHTGACYDALAEILGFEDPART--AERLLREIGEDDREVLRRLLNVLVRR 178

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
             + G   +A   +  ++  G  P   TY+ L+   A+AG+ E    V KEM  S     
Sbjct: 179 CCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS----- 233

Query: 405 SFIYSRILAGYRDR-----GEWQRTFQVLKE----------------------------- 430
            F   R   GY  +     G W     +L++                             
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293

Query: 431 ---MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M+ +   P+   Y  ++  F K           + M++EG  P+   +N+L+  +  
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED------VKRLLGNMRAQGL 541
            G Y  A +LF  M   G  P    YNI I  +  QE   +      V+++   M A   
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASC 413

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           + N V            G+F+ A + L           + M   G  P       +I   
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQIL-----------KEMMRKGFVPDTSTYTKVITFL 462

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + ++  ++F + Q MK  G+ PDV TYT L+ +  +
Sbjct: 463 CQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCK 499


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 219/479 (45%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ILI AL R+ ++  A LL +      L P   T+  ++       +L+ A+ +  +M 
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC-DKIELDGQLLNDVIVGFAKAG 279
           + G     +  ++++    +  +I+ +L  +  +E+   +    D    N ++ G +K G
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEAL--RFIEEMSLREGFFPDKYTFNMLVNGLSKTG 315

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A+  + M    G  P   TY ++I+ L   G   EA  V  ++ E    P T  YN
Sbjct: 316 HVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYN 375

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++    K   +++A  +   +   G+LPD  TY+ LI     +     A  + KEM+  
Sbjct: 376 TIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK 435

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+ F Y+ ++     RG+ Q    +LKEM+ SG   +   YN +ID F K   +  A
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              FD+M  +G+  +++T+NTLID   K  R + A +L ++M   G  P   TYN ++  
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +    +    ++  M + G  P++VTY TL+    ++GR + A + L           
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLL----------- 604

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           R ++  G+  +  A N +I A    +R  EA  + + M E    PD VTY  + + L +
Sbjct: 605 RTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 203/451 (45%), Gaps = 22/451 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN L++     + L+      S M   G   D   ++++I++L R ++I  ++L  L +E
Sbjct: 163 YNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAIL--LMEE 220

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   +  D +    ++ GF + G+   AMR        G      T   ++      GR
Sbjct: 221 MEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGR 280

Query: 316 TIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             EA    EE+    G  P    +N L+ G  K G++K A  V+  M R G  PD +TY+
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI      G  + A  VL +M      PN+  Y+ I++      + +   ++   +   
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHH----AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           G+ PD   YN +I       CL      AM  +  M ++G  PD  T+N LID     G+
Sbjct: 401 GILPDVCTYNSLIQGL----CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A  L +EM+  G      TYN +I+   + +R  + + +   M  QG+  N VTY T
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D   +S R ++A +    L DQ       M  +GL+P     NSL+  F +     +A
Sbjct: 517 LIDGLCKSERVEEASQ----LMDQ-------MIMEGLRPDKFTYNSLLTYFCKAGDIKKA 565

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             ++Q M  +G +PD+VTY TL+  L +  +
Sbjct: 566 ADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 220/480 (45%), Gaps = 30/480 (6%)

Query: 190 RLTP-LTYNALISACARNDDLEKALNLMS-KMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
           RL+P  T   L+ +  R +D    ++L     +Q  +      +  V+  L +  + D+ 
Sbjct: 49  RLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDA- 107

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAV 306
            ++ + KE++     +D   L   I  +A  G  ++ ++F+  M    G+   T  Y  +
Sbjct: 108 -MKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFL 166

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L +  +    E     +   G++P    +N L+K   +   ++ A  ++ EME  G+
Sbjct: 167 LNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGL 226

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           LPDE T++ ++  +   G  + A  V ++M  +     +   + ++ G+   G  +   +
Sbjct: 227 LPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALR 286

Query: 427 VLKEMK-SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            ++EM    G  PD + +N++++   K   + HA+   D ML EG +PD  T+N+LI   
Sbjct: 287 FIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGL 346

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G  D A ++  +M ER   P T TYN +I+ L ++ + E+  +L   +  +G+LP+V
Sbjct: 347 CKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406

Query: 546 VTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRV 581
            TY +L+     S     A+E                        C  G   +A+N  + 
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G   + +  N+LI+ F +++R AEA  +   M+  G+  + VTY TL+  L + ++
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 14/287 (4%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P    +  ++     AG +++ + +LKEM++S +  ++      +  Y   G +    Q 
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQF 146

Query: 428 LKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  M+   GV  +THFYN +++     N L     A   M+S GI PD  T+N LI    
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  +   A  L EEM++ G  P   T+  ++    E+   +   R+   M   G +   V
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           T   LV+ + + GR ++A+  +E +S +          +G  P     N L+N   +   
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLR----------EGFFPDKYTFNMLVNGLSKTGH 316

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSSYL 650
              A  V+  M   G  PD+ TY +L+  L +   VD+  KV +  +
Sbjct: 317 VKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 13/288 (4%)

Query: 129 WHSLLKNLC-SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           ++SL++ LC S N ++ +    +    K   C+  E  Y++LI +L    KL EA  L +
Sbjct: 409 YNSLIQGLCLSRNHTVAME---LYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK 465

Query: 188 RQRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
              ++      +TYN LI    +N  + +A  +  +M   G   + + Y+ +I  L ++ 
Sbjct: 466 EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSE 525

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           +++ +   +L  ++  + +  D    N ++  F KAGD  KA   +      G  P   T
Sbjct: 526 RVEEA--SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L  +GR   A  +   ++  G+     AYN +++   +    K+A  +  EM 
Sbjct: 584 YGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMI 643

Query: 363 RSGVLPDEHTYSLLIDAYANAGR--WESARIVLKEMEVSHAKPNSFIY 408
                PD  TY ++       G    E+   V++ +E  +    S  Y
Sbjct: 644 EKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 217/491 (44%), Gaps = 31/491 (6%)

Query: 176 SEKLYEAFLLSQRQRLTPLTYNALISACAR-------NDDLEKALNLMSKMRQDGYHCD- 227
           +  L++  LL +         N L+SA AR        D    A+ L  +M  D   C  
Sbjct: 127 ARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRM--DRCACPE 184

Query: 228 ----FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
                  Y+++I    R  + D  L   ++  +    +  D    N +I GF+K G+  K
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGL--PVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A       +  G+ P   TY+++I  L  +    +AE V  ++  +G++P    YN L+ 
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY   G  K++  V  EM  S ++PD    +  + A    GR + AR +   M +   KP
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y  +L GY   G       +   M   GV PD H +N +I+ + +   +  ++  F
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           + M  +G+ PD IT++T+I    + GR D A E F  M + G  P T  Y+ +I     +
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVT-YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
                 K L+ +M ++G+ P  +  +T++++   + GR  +  + ++           ++
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD-----------LI 531

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RV 639
              G +P+ +  NSL++ +       EA  +L  M+  G++PD+ TY TL+       R+
Sbjct: 532 IHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRI 591

Query: 640 DKFHKVFSSYL 650
           D    +F   L
Sbjct: 592 DDALTLFRDML 602



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 231/546 (42%), Gaps = 56/546 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SL+  LC +   +D A  V+  +    +     + Y+ LIH    S    E+  + + 
Sbjct: 262 YSSLINGLCKTKE-MDKAERVLRQMVGAGV-RPNNMTYNCLIHGYSTSGMWKESVRVFKE 319

Query: 189 QRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + L       N+ ++A  ++  +++A ++   M   G   D I+Y  ++        
Sbjct: 320 MSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGC 379

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I    +  L+  + C+ +  D  + N +I  +A+ G   K++         G++P   T+
Sbjct: 380 IAG--MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF 437

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + VI+A    GR  +A   F  + ++G+ P T  Y+ L++G      L  A+ ++S+M  
Sbjct: 438 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 497

Query: 364 SGVLPD-EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G+ P     ++ +I+     GR    + V+  +  +  +PN   ++ ++ GY   G  +
Sbjct: 498 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 557

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L  M+S GVEPD + YN ++D + K+  +  A+  F  ML + +   ++++N ++
Sbjct: 558 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 617

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFP----------------CT---------------- 510
              F+  R   A+E+F EM E G                   CT                
Sbjct: 618 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 677

Query: 511 ---TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               T+NI+I  + +  R ++ K L   +   GL+P ++TY  ++    +   F+D    
Sbjct: 678 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFED---- 733

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                  A N F  M      P +  LN +I         A+A   L  + + G+ P+  
Sbjct: 734 -------ADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEAT 786

Query: 628 TYTTLM 633
           T + L+
Sbjct: 787 TTSLLI 792



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 21/298 (7%)

Query: 114 EFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH-NLCYSYELL------- 165
           E ++AE    V   +      NL + NS +D  Y +V  +++   L  S E +       
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVD-GYCLVGNMKEAVGLLDSMESVGVEPDIY 576

Query: 166 -YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y+ L+    +  ++ +A      +L +R  LT ++YN ++    +      A  +  +M
Sbjct: 577 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + G       Y+ V+  L R N  D +  LL+KL+       ++ D    N VI    K
Sbjct: 637 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM----NVKFDILTFNIVIRAMFK 692

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A          GL P   TY  +IT L       +A+ +F  +++S   P ++ 
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            N +++  +  G +  A   +S++++ G+LP+  T SLLI  ++  G++     +L E
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/306 (19%), Positives = 123/306 (40%), Gaps = 42/306 (13%)

Query: 165 LYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            ++ +I+ L +  ++ E       ++   QR   +T+N+L+       ++++A+ L+  M
Sbjct: 507 FFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSM 566

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF--AK 277
              G   D   Y+ ++    +  +ID +L   L++++   ++ L     N ++ G   A+
Sbjct: 567 ESVGVEPDIYTYNTLVDGYCKHGRIDDAL--TLFRDMLHKRVTLTSVSYNIILHGLFQAR 624

Query: 278 AGDASKAMRFLGMAQGVGLSPKT---------------------------------ATYA 304
               +K M    +  G+ +S  T                                  T+ 
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 684

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            VI A+   GR  EA+ +F  +   GL P    Y  ++   +K    +DA+ + S ME+S
Sbjct: 685 IVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 744

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              PD    + +I    N G    A   L +++     P +   S ++  +   G+++  
Sbjct: 745 SCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREY 804

Query: 425 FQVLKE 430
            ++L E
Sbjct: 805 IKLLPE 810


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 234/504 (46%), Gaps = 37/504 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  +   +     TY  LI +  +   +E+A +   +M 
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEME 517

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G     + Y+ ++ +  +T ++   S +  ++  +  C    +    L D   G  KA
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMV-DAGCAPNTITYSALVD---GLCKA 573

Query: 279 GDASKAM----RFLGMAQGVG------------LSPKTATYAAVITALSNSGRTIEAEAV 322
           G++ KA     + +G +  VG            ++P   TY A+I  L  + + ++A+ +
Sbjct: 574 GESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQEL 633

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +  +G +P    Y+AL+ G+ K+G L +A+ V   M + G LP  HTY+ LIDA   
Sbjct: 634 LDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFK 693

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             R + A  VL +M  S   PN   Y+ ++ G    GE Q+  ++L  M+  G  P+   
Sbjct: 694 DRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVT 753

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  +ID  GK   +  ++  F +M+++G  P+ +T+  LI+     G  D A  L  EM+
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           +  +      Y  ++   G  +++     LL  + + G++     Y  L+D + ++GR +
Sbjct: 814 QTYWPKYVQGYCSVVQ--GFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLE 871

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+E L     +  ++  +   D          SLI A     +  +AF +   +   G+
Sbjct: 872 KALE-LHKEMMEVSSSLNITSKD-------TYTSLIQALCLASQLEKAFELYSEITRKGV 923

Query: 623 KPDVVTYTTLMKALIRVDKFHKVF 646
            P++  +  L+K LI+V+K+++  
Sbjct: 924 VPELSAFICLIKGLIKVNKWNEAL 947



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/538 (22%), Positives = 216/538 (40%), Gaps = 86/538 (15%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +  TYNAL+   A    ++    +  +M + G+  D        Q+L +  +   +L+
Sbjct: 204 RPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALV 263

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                 IE +  +LD  L   +I G  +A    +A+ FL   +     P   TY  ++  
Sbjct: 264 M-----IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAG 318

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
                +    + +   +   G  P    +N+L+  Y        A  +++ M   G  P 
Sbjct: 319 FLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPG 378

Query: 370 EHTYSLLIDAYANA-----------------------------------------GRWES 388
              Y++ I +  +                                          G+++ 
Sbjct: 379 YVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDK 438

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++K M      P++  YS+++    +  + ++ F + +EMKS GV PD + Y ++ID
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID 498

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +F K   +  A + FD M S G  P  +T+  L+  + K  +  +A ++F  M + G  P
Sbjct: 499 SFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAP 558

Query: 509 CTTTYNIMINLL---GEQERWEDV-KRLLGNMRAQG------------LLPNVVTYTTLV 552
            T TY+ +++ L   GE ++  +V  +++G     G            + PNVVTY  L+
Sbjct: 559 NTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALI 618

Query: 553 DIYGQSGRFDDAIECLEGLS------------------------DQAVNAFRVMRTDGLK 588
           D   ++ +  DA E L+ +S                        D A   F  M   G  
Sbjct: 619 DGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYL 678

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           P+     SLI+A  +D+R   A  VL  M E+   P+VVTYT ++  L R+ +  K  
Sbjct: 679 PTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 197/471 (41%), Gaps = 57/471 (12%)

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           RQ GY      Y+ + + L   ++  ++  ++L +EI  D  E+ G+LLN ++    + G
Sbjct: 129 RQVGYSHTGACYNALAEVLHFDDRARTT--ERLLREIGEDDREVLGRLLNVIVRKCCRHG 186

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA+  LG  +  G  P  ATY A++  L+ +G+      V +E+ E G         
Sbjct: 187 AWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVG 246

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
              +   K G   DA  ++   ER     D    + +I     A  ++ A   L  M  +
Sbjct: 247 CFAQALCKEGRWSDALVMI---EREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCN 303

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   Y  +LAG+  + +     +++  M + G  P+   +N ++ ++       +A
Sbjct: 304 SCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYA 363

Query: 460 MAAFDRMLSEGIEPDTITWNTLID------------------------------------ 483
               +RM   G  P  + +N  I                                     
Sbjct: 364 YKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNT 423

Query: 484 -----CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
                C    G++D+A ++ + M  +G+ P T+TY+ +I  L E  + E    L   M++
Sbjct: 424 ANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 483

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G++P+V TYT L+D +           C  GL +QA + F  M + G  PS +   +L+
Sbjct: 484 VGVIPDVYTYTILIDSF-----------CKVGLIEQARSWFDEMESVGCSPSVVTYTALL 532

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +A+ + ++  +A  +   M + G  P+ +TY+ L+  L +  +  K    Y
Sbjct: 533 HAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVY 583



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/517 (21%), Positives = 208/517 (40%), Gaps = 75/517 (14%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           ++ ++ FL E    E A  L           F+  +S   +P    +++L +   S   +
Sbjct: 458 YSKVITFLCEAMKVEKAFLL-----------FQEMKSVGVIPDVYTYTILID---SFCKV 503

Query: 144 DLAYAVVSWLQKHNL--CYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTY 196
            L     SW  +     C    + Y+ L+HA  +++++ +A  +  R       P  +TY
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563

Query: 197 NALISACARNDDLEKALNLMSKMRQ-----------DGYHCD-----FINYSLVIQSLTR 240
           +AL+    +  + +KA  + +KM             +G H D      + Y  +I  L +
Sbjct: 564 SALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCK 623

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            +K+  +  Q+L   +  +  E +  + + +I GF K G    A          G  P  
Sbjct: 624 AHKVVDA--QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTV 681

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY ++I A+    R   A  V  ++ ES   P    Y A++ G  ++G  + A  ++S 
Sbjct: 682 HTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 741

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-----AGY 415
           ME+ G  P+  TY+ LID    +G+ + +  +  +M      PN   Y  ++     AG 
Sbjct: 742 MEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGL 801

Query: 416 RDRGE----------WQRTFQ------------------VLKEMKSSGVEPDTHFYNVMI 447
            D             W +  Q                  +L+E++S G+      Y ++I
Sbjct: 802 LDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLI 861

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTI---TWNTLIDCHFKCGRYDRAEELFEEMQER 504
           D+F K   L  A+     M+      +     T+ +LI       + ++A EL+ E+  +
Sbjct: 862 DSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRK 921

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           G  P  + +  +I  L +  +W +  +L  +M  +G+
Sbjct: 922 GVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 145/391 (37%), Gaps = 49/391 (12%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL   + VG S   A Y A+   L    R    E +  E+ E   +   +  N +++   
Sbjct: 124 FLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCC 183

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM---------- 396
           + G    A   +  ++  G  P   TY+ L+   A AG+ +    V KEM          
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243

Query: 397 ----------------------EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
                                 E    K ++ + +++++G  +   +      L  M+ +
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCN 303

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              P+   Y  ++  F K   L         M++EG  P+   +N+L+  +     Y  A
Sbjct: 304 SCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYA 363

Query: 495 EELFEEMQERGYFPCTTTYNIMINLL--GEQERWEDV----KRLLGNMRAQGLLPNVVTY 548
            +L   M   G  P    YNI I  +  GE+    D+    +++   M A   + N V  
Sbjct: 364 YKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNT 423

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                     G+FD A + +           ++M   G  P     + +I    E  +  
Sbjct: 424 ANFARCLCGMGKFDKAFQII-----------KLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +AF + Q MK  G+ PDV TYT L+ +  +V
Sbjct: 473 KAFLLFQEMKSVGVIPDVYTYTILIDSFCKV 503


>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
          Length = 607

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 200/434 (46%), Gaps = 66/434 (15%)

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKESGLKPRTKAYNALLK 343
           M  L   +G GL P T +Y AVI A    G  +      F ++ + GL P  K +N+LL 
Sbjct: 1   MGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLA 60

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
              ++G+L+DA  V  EM   G+  D +TY+  IDA    G  E A  VL +ME    KP
Sbjct: 61  ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           N   YS ++ GY    +++   ++ ++MKS  ++ D   YN ++  + K           
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           D M   GIE DT+T+N+LI+ + K GR D    L ++M++RG  P   TY+ +I++  + 
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKA 240

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
               D   +  + +  GL P+VV +++ +D   ++G  + A+  L  +++          
Sbjct: 241 GMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEM--------- 291

Query: 584 TDGLKPSNLALNSLINAFGEDQ-------------------------------------- 605
             G+KP+ +  N++I+AFG+ +                                      
Sbjct: 292 --GIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATD 349

Query: 606 ----RDAEAFAVL---QYMKENGLKPDVVTYTTLMKALIRVDKFH---------KVFSSY 649
               R  E F +L   Q M + G++P+VVT++ ++ A  R + F          ++F ++
Sbjct: 350 VRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNF 409

Query: 650 LFFNIYKMLSYSGE 663
           ++   Y +L  S E
Sbjct: 410 VYGVAYGLLVGSRE 423



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 181/399 (45%), Gaps = 25/399 (6%)

Query: 190 RLTPLTYNALISACARND-DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           R T ++YNA+I AC +   DL   L    +M +DG   D   ++ ++ + +R   ++ + 
Sbjct: 13  RPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDA- 71

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            + ++ E+    I  D    N  I    K G+   AM+ L   +  G+ P   TY+ +I 
Sbjct: 72  -RAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLID 130

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
             S   +  EA  + E++K   ++     YN LL  YVK G   +   V  EME  G+  
Sbjct: 131 GYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEK 190

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ LI+ Y   GR +   I++++M      P+   YS ++  Y   G     F V 
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 250

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            + K SG++PD   ++  IDT  K   +  A++  + M   GI+P+ +T+N +ID     
Sbjct: 251 LDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDA---- 306

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMI----NLLGEQER-WEDVK-----------RL 532
             + +++ + E+  E G       Y   I    N +    R   DV+            L
Sbjct: 307 --FGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILEL 364

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
              M  QG+ PNVVT++ +++   +   F+DA   LE L
Sbjct: 365 FQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQL 403



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 173/411 (42%), Gaps = 50/411 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N+L++AC+R   LE A  +  +M   G   D   Y+  I ++ +   ++  L  ++  
Sbjct: 54  TFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNME--LAMQVLL 111

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++E   ++ +    + +I G++K     +A++     + + +      Y  ++     +G
Sbjct: 112 DMEAKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAG 171

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  E   V +E++E G++  T  YN+L+ GY K G L     +V +M + GV P   TYS
Sbjct: 172 KYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYS 231

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID Y+ AG    A  V  + + S  KP+  ++S  +      G  +    +L +M   
Sbjct: 232 TLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEM 291

Query: 435 GVEPDTHFYNVMIDTFGKYNC--------------------------------------- 455
           G++P+   YN +ID FGK                                          
Sbjct: 292 GIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVR 351

Query: 456 ------LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 L   +  F +M+ +G+ P+ +T++ +++   +C  ++ A  L E+++    F  
Sbjct: 352 MRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVY 411

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
              Y +   L+G +E W   + L   +       +   Y  L D+    G+
Sbjct: 412 GVAYGL---LVGSREVWSQAQSLFNQLGRMDSPTSSAFYNALTDVLWHFGQ 459


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 196/436 (44%), Gaps = 16/436 (3%)

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           C + DD   A +L  +M Q       ++++ V+  + + NK D  ++  LY ++E   I 
Sbjct: 57  CIKFDD---AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD--IVIYLYHKMENLGIS 111

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D      +I  F +    S A+  LG    +G  P   T  +++       R  EA ++
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 171

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +   G  P    YN ++ G  K   L +A  V   ME+ G+  D  TY+ LI   +N
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           +GRW  A  +L++M      PN   ++ ++  +   G       + KEM    V P+   
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +I+ F  + CL  A   FD M+S+G  PD +T+NTLI    K  R +   +LF EM 
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            +G      TYN +I+   +  +    +++   M   G+ P++VTY  L+D    +G+ +
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+  +E L    ++              +  N +I       +  EA+ + + +   G+
Sbjct: 412 KALVMVEDLQKSEMDV-----------DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460

Query: 623 KPDVVTYTTLMKALIR 638
           KPD + Y T++  L R
Sbjct: 461 KPDAIAYITMISGLCR 476



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 11/418 (2%)

Query: 147 YAVVSWL--QKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNA 198
           + +V +L  +  NL  S++L  ++ILIH   R  +L  A  L  +      R + +T  +
Sbjct: 95  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           L++   + +  ++A++L+  M   G+  + + Y+ VI  L +   ++++L  +++  +E 
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL--EVFYCMEK 212

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             I  D    N +I G + +G  + A R L       + P    + A+I      G  +E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +++E+    + P    YN+L+ G+   G L DA+++   M   G  PD  TY+ LI 
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +  + R E    +  EM       ++F Y+ ++ GY   G+     +V   M   GV P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   YN+++D       +  A+   + +    ++ D IT+N +I    +  +   A  LF
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT-TLVDIY 555
             +  +G  P    Y  MI+ L  +    +  +L   M+  G +P+   Y  TL D Y
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 14/333 (4%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A ++F E+ +S   P    +  +L    KM       ++  +ME  G+  D +++++LI
Sbjct: 62  DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             +    R   A  +L +M     +P+      +L G+     +Q    ++  M   G  
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   YN +I+   K   L++A+  F  M  +GI  D +T+NTLI      GR+  A  L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +M +R   P    +  +I+   ++    + + L   M  + ++PNV TY +L++ +  
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF-- 299

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C+ G    A   F +M + G  P  +  N+LI  F + +R  +   +   M
Sbjct: 300 ---------CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFH---KVFS 647
              GL  D  TY TL+    +  K +   KVF+
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 221/483 (45%), Gaps = 21/483 (4%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS +I +L +  K  E++     +++         +N ++   AR++++EKA  +   M 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + GY  D ++Y ++I  L +  K+D SL  K+  E+         Q  + ++   AKA  
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESL--KILSEMVMRGQTPSMQAYSSLVRALAKARR 130

Query: 281 ASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              A   F  M +G G  P    +  +I  L  +G+  +A   F+++ + G +P    YN
Sbjct: 131 VDHASSLFDEMIRG-GHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYN 189

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL G    G L+ A  + +EM+     PD  TY+ L+DA   A R E    + + M  +
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   +S ++ G    GE ++  +V   M  +G +P+ + Y  +I    +   +  A
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMIN 518
              F++M    I PD + +N+LI  + K G  D AE+L+ EM    G  P   T+N +I+
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLID 369

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  +      L+  M  +GL  +  TY  L+    ++ + D+A+E            
Sbjct: 370 GFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE-----------V 418

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           ++ MR        ++  S +    +     +A+AV +  +++G  P+  T+  L ++LI+
Sbjct: 419 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478

Query: 639 VDK 641
           + +
Sbjct: 479 LGR 481



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 189/431 (43%), Gaps = 12/431 (2%)

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR      +   YS +I+SL +  K + S   K+ +E+       D    N V+ GFA++
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESY--KVLEEMMAAGCNPDVFAFNGVMQGFARS 58

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            +  KA          G  P   +Y  +I  L+  G+  E+  +  E+   G  P  +AY
Sbjct: 59  NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAY 118

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           ++L++   K   +  A  +  EM R G  PD   +  LI     AG+ + A    K+M  
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +PN  +Y+ +L G    G+ ++   +  EMKS    PD   YN ++D   K   +  
Sbjct: 179 HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEE 238

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
               F+ M + G  P+ IT++TLI    + G  ++A E+F  M E G  P   TY  +I+
Sbjct: 239 GCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIS 298

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L   E+    + L   M    + P+ V Y +L+  Y + G  D+A +    +S  A   
Sbjct: 299 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA--- 355

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  GL+P+ +  N+LI+ F +  +   A  ++  M   GL  D  TY  L+  L R
Sbjct: 356 -------GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408

Query: 639 VDKFHKVFSSY 649
             K  +    Y
Sbjct: 409 ATKLDEALEVY 419



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 193/410 (47%), Gaps = 8/410 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y ILIH L +  KL E+      ++ + Q  +   Y++L+ A A+   ++ A +L  +M 
Sbjct: 83  YHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMI 142

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+H D + +  +I  L +  K+  +   + +K++     + +  + N ++ G   +G 
Sbjct: 143 RGGHHPDRLMFYELILGLCQAGKVKDA--SERFKQMPKHGCQPNVPVYNVLLHGLCSSGQ 200

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A       +    SP   TY  ++ A+  + R  E   +FE ++ +G  P    ++ 
Sbjct: 201 LEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFST 260

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  + G L+ A  V   M  +G  P+++TY+ LI     A +   AR + ++M  + 
Sbjct: 261 LIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQAC 320

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHA 459
             P++  Y+ ++AGY  RG      ++ +EM   +G++P    +N +ID F K   L  A
Sbjct: 321 IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRA 380

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                 M ++G+  D+ T+  LI    +  + D A E++++M+E+ +     +    +  
Sbjct: 381 NELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGG 440

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           L +    +    +    R  G +PN  T+  L +   + GR +DA + +E
Sbjct: 441 LCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 197/410 (48%), Gaps = 16/410 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D ++Y+ ++     T ++D++  ++L   +    +E D    N +I G    G    A+ 
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNA--RRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALA 173

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   TY  ++ A        +A  + +E+++ G  P    YN ++ G  
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G + DA   +  +   G  P+  +Y++++     A RWE A  ++ EM      PN  
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +++    RG  +   ++L ++   G  P++  YN ++  F K   +  AMA  + M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +S G  PD +++NTL+    + G  D A EL  +++++G  P   +YN +I+ L +  + 
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E+   LL  M  +GL P+++TY+T+      SG       C EG  ++A+ AF  ++  G
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTI-----SSGL------CREGRIEEAIKAFCKVQDMG 462

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           ++P+ +  N+++    + +    A  +  YM  NG  P+  TYT L++ L
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 37/407 (9%)

Query: 269 NDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTA-TYAAVITALSNSGRTIEAEAVFEEL 326
           ND +    + GD  +A+R +  MA   GL P  A   AA+I  L  SGRT EA  V    
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMA---GLEPSAAGPCAALIKKLCASGRTAEARRVL--- 113

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             +  +P   +YNA++ GY   G L +A  +V+ M      PD +TY+ LI      GR 
Sbjct: 114 --ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRT 168

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           ++A  VL +M      P+   Y+ +L     R  +++  ++L EM+  G  PD   YNV+
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ++   +   +  AM     + S G EP+T+++N ++       R++ AE+L  EM  +G 
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   T+N++I+ L  +   E    +L  +   G  PN ++Y  ++  + +  + D A+ 
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C  G  D AV     ++  G  P  ++ N++I+   
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  +  EA  +L  M   GL+PD++TY+T+   L R  +  +   ++
Sbjct: 409 KAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAF 455



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 174/391 (44%), Gaps = 14/391 (3%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E D    N ++ G+   G    A R +     + + P T TY  +I  L   GRT  A A
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVA---AMPMEPDTYTYNTLIRGLCGRGRTDNALA 173

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           V +++   G  P    Y  LL+   K    K A  ++ EM   G  PD  TY+++++   
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             GR + A   LK +     +PN+  Y+ +L G      W+   +++ EM   G  P+  
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            +N++I    +   +  AM   D++   G  P+++++N ++    K  + DRA    E M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G +P   +YN ++  L      +    LL  ++ +G  P +++Y T++D   ++G+ 
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           ++A+E L             M T GL+P  +  +++ +    + R  EA      +++ G
Sbjct: 414 EEALELLNE-----------MVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           ++P+ V Y  ++  L +    H     + + 
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYM 493



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 197/448 (43%), Gaps = 11/448 (2%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR 190
           +L+K LC+S  + +    + S       C    + Y+ ++     + +L  A  L     
Sbjct: 95  ALIKKLCASGRTAEARRVLAS-------CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP 147

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           + P   TYN LI         + AL ++  M + G   D + Y++++++  + +    ++
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             KL  E+       D    N V+ G  + G    AM FL      G  P T +Y  V+ 
Sbjct: 208 --KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLK 265

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  + R  +AE +  E+   G  P    +N L+    + G ++ A  ++ ++ + G  P
Sbjct: 266 GLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  +Y+ ++ A+    + + A   ++ M  S   P+   Y+ +L      GE     ++L
Sbjct: 326 NSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELL 385

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            ++K  G  P    YN +ID   K      A+   + M+++G++PD IT++T+     + 
Sbjct: 386 HQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCRE 445

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR + A + F ++Q+ G  P T  YN ++  L ++        L   M + G +PN  TY
Sbjct: 446 GRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTY 505

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           T L++     G   +A E +  L  + V
Sbjct: 506 TILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 186/416 (44%), Gaps = 6/416 (1%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++   C +   +D A  +V+ +      Y+Y  L   L    GR++          R
Sbjct: 123 YNAMVAGYCVTGQ-LDNARRLVAAMPMEPDTYTYNTLIRGLC-GRGRTDNALAVLDDMLR 180

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +   P  +TY  L+ A  +    ++A+ L+ +MR  G   D + Y++V+  + +  ++D 
Sbjct: 181 RGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDD 240

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           ++  +  K +     E +    N V+ G   A     A + +      G  P   T+  +
Sbjct: 241 AM--EFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNML 298

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I+ L   G    A  + +++ + G  P + +YN +L  + K   +  A   V  M  SG 
Sbjct: 299 ISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGC 358

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  +Y+ L+ A    G  ++A  +L +++     P    Y+ ++ G    G+ +   +
Sbjct: 359 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALE 418

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L EM + G++PD   Y+ +     +   +  A+ AF ++   GI P+T+ +N ++    
Sbjct: 419 LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           K      A +LF  M   G  P  +TY I+I  L  +   ++ + ++  + ++G++
Sbjct: 479 KRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 171/397 (43%), Gaps = 9/397 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L++ LC    + D A AV+  + +   C    + Y+IL+ A  +     +A  L   
Sbjct: 155 YNTLIRGLCGRGRT-DNALAVLDDMLRRG-CVPDVVTYTILLEATCKRSGYKQAVKLLDE 212

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R     P  +TYN +++   +   ++ A+  +  +   G   + ++Y++V++ L    +
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            + +  +KL  E+       +    N +I    + G    AM  L      G +P + +Y
Sbjct: 273 WEDA--EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++ A     +   A A  E +  SG  P   +YN LL    + G +  A  ++ +++ 
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  P   +Y+ +ID    AG+ E A  +L EM     +P+   YS I +G    G  + 
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEE 450

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             +   +++  G+ P+T  YN ++    K    H A+  F  M+S G  P+  T+  LI+
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                G    A E+  E+  RG    T      I LL
Sbjct: 511 GLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLL 547


>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
          Length = 1420

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 253/536 (47%), Gaps = 39/536 (7%)

Query: 129 WHSLLKNLCSSNSSIDL--AYAVVSWLQKHNLCYSYELLYSILIHA------LGRSEKLY 180
           + +L K + S N   DL  A+ + + LQ  N     E+L+++L+ A      L R+ +L+
Sbjct: 474 YSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELF 533

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC---DFINYSLVIQS 237
           +      + ++     +   ++ +  D  + A N  + +    +H    D I+++ +I+ 
Sbjct: 534 KQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKG 593

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             +  K+  +       +++C  ++ +    N +I    +    + A + L   Q   + 
Sbjct: 594 CAQEKKLQLAFEMFNLMKMQC--LKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIV 651

Query: 298 PKTATYAAVI----------TALSNSGRTIEAEAVFEELKES--GLKPRTKAYNALLKGY 345
           P   TY+ +I            +SN     +A A+ E++K+S  G+KP    YN L+   
Sbjct: 652 PDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDAC 711

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
           V+   +  A  V  EM+ S + P   TY +LI AY +A + ++A  V K+M+ +   PNS
Sbjct: 712 VRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNS 771

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y  ++       + +R  +V + MK  GV+ +T  +  +I  F K   L  A+  +  
Sbjct: 772 VTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQI 831

Query: 466 M-LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE--RGYFPCTTTYNIMINLLGE 522
           M + + I+P+ +T+N+LIDC  +C    +A E+FEEM++      P   TY+ MI     
Sbjct: 832 MKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCR 891

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           ++  +    +L +M    ++ + V Y +L+D             C     + A+  ++ M
Sbjct: 892 EKNIQQALIMLNDMEKNNIMADEVLYNSLLDGC-----------CKANEIEMALKVYKNM 940

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               +KPSN+  + LI  +G+ +   +A  VL+ MK++G++P ++ YT L++  I+
Sbjct: 941 EILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIK 996



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 246/504 (48%), Gaps = 41/504 (8%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMS 217
           E+LY+ +I    ++ ++ +AFLL      + +TP  +T+N+LI  C R+ + ++A  ++ 
Sbjct: 401 EVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLE 460

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK---LYKEIE-CDKIELDGQLLN---D 270
           +M++     D   YS + + +   N+     L+K   LY +++  +    D  L N   D
Sbjct: 461 QMKEKQVKPDNYTYSTLFKGIKSENQRQD--LEKAFVLYNQLQNSNDFTPDEILFNVLLD 518

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
             +   +   A +  + L       +       A    +L +S  + + A AV       
Sbjct: 519 ACINCKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHH 578

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            ++P   ++N ++KG  +   L+ A  + + M+   + P++ TY+ LIDA     R  SA
Sbjct: 579 FMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSA 638

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ----------RTFQVLKEMKSS--GVE 437
             +L EM+ ++  P++F YS ++ G R   + Q          + F +L++MK S  GV+
Sbjct: 639 WQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVK 698

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   YN +ID   +++ ++ A+A F  M    I+P ++T+  LI  +    + D A  +
Sbjct: 699 PDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFV 758

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F++M++    P + TY  +I+   +  + E    +   M+  G+  N + +TTL+  + +
Sbjct: 759 FKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAK 818

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDG-LKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           S + D A+E            +++M+ D  +KP+N+  NSLI+         +A  + + 
Sbjct: 819 SFKLDQALE-----------VYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEE 867

Query: 617 MKE--NGLKPDVVTYTTLMKALIR 638
           MK+  +  KPD++TY+T++K   R
Sbjct: 868 MKQPISHTKPDLITYSTMIKGFCR 891



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 218/484 (45%), Gaps = 54/484 (11%)

Query: 146  AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL---YEAFLLSQRQRLTP--LTYNALI 200
            A AVV+    H+     E+ ++ +I    + +KL   +E F L + Q L P  +TYN+LI
Sbjct: 568  APAVVNS-SNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLI 626

Query: 201  SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-----LQKLYKE 255
             AC R + L  A  L+S+M+Q+    D   YS +I+ +   N+  + +     L+K +  
Sbjct: 627  DACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFAL 686

Query: 256  IECDK-----IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            +E  K     ++ D  L N +I    +  D ++A+      Q   + P + TY  +I A 
Sbjct: 687  LEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAY 746

Query: 311  SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL--- 367
             ++ +   A  VF+++K++ L P +  Y  L+   VK   ++ A  V   M+R GV    
Sbjct: 747  GSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNT 806

Query: 368  ---------------------------------PDEHTYSLLIDAYANAGRWESARIVLK 394
                                             P+  T++ LID        + A  + +
Sbjct: 807  IIFTTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFE 866

Query: 395  EME--VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            EM+  +SH KP+   YS ++ G+      Q+   +L +M+ + +  D   YN ++D   K
Sbjct: 867  EMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCK 926

Query: 453  YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
             N +  A+  +  M    I+P  +T++ LI  + K     +A  + EEM++ G  P    
Sbjct: 927  ANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIV 986

Query: 513  YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            Y  ++    +  + +  ++L  +MR QG+  + +TY T+++    S +FD  +  L+  S
Sbjct: 987  YTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDAS 1046

Query: 573  DQAV 576
            D  V
Sbjct: 1047 DSKV 1050



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 219/472 (46%), Gaps = 50/472 (10%)

Query: 207 DDLEKALNLMSKMRQDGYHC-DFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELD 264
           ++ E+  N +  + +D  +C D + +S +I+   R  ++  +L +  + KE     I+ D
Sbjct: 344 EEAEQIYNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKE---RGIKPD 400

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             L N +I G +K    +KA        G G++P T T+ ++I     SG   +A  V E
Sbjct: 401 EVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLE 460

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAE--FVV-SEMERSG-VLPDEHTYSLLIDAY 380
           ++KE  +KP    Y+ L KG       +D E  FV+ ++++ S    PDE  +++L+DA 
Sbjct: 461 QMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDAC 520

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ-----------VLK 429
            N  + + A  + K++     KP S    +I     D  +   + +           V+ 
Sbjct: 521 INCKQLDRAVELFKQL-----KPQS--QPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVN 573

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                 + PD   +N +I    +   L  A   F+ M  + ++P+ +T+N+LID   +C 
Sbjct: 574 SSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCN 633

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE-------DVKR---LLGNMRAQ 539
           R + A +L  EMQ+    P   TY+ +I  +  + + +       D+++   LL  M+  
Sbjct: 634 RLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQS 693

Query: 540 --GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G+ P+ + Y  L+D      RF D         ++AV  F+ M+   +KPS++    L
Sbjct: 694 NGGVKPDEILYNCLIDA---CVRFHDV--------NRAVAVFQEMQFSNIKPSSVTYGIL 742

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           I A+G   +   AF V + MK+N L P+ VTY  L+ A ++ ++  +    +
Sbjct: 743 IKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVF 794



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 179/373 (47%), Gaps = 15/373 (4%)

Query: 163  ELLYSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMS 217
            E+LY+ LI A  R   +  A  + Q  + +      +TY  LI A    + L+ A  +  
Sbjct: 701  EILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFK 760

Query: 218  KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            KM+ +    + + Y  +I +  + N+I+ ++  ++++ ++ D ++L+  +   +I GFAK
Sbjct: 761  KMKDNCLIPNSVTYGCLIDACVKNNQIERAM--EVFETMKRDGVQLNTIIFTTLIKGFAK 818

Query: 278  AGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE--SGLKPR 334
            +    +A+  +  M     + P   T+ ++I          +A  +FEE+K+  S  KP 
Sbjct: 819  SFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPD 878

Query: 335  TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
               Y+ ++KG+ +   ++ A  ++++ME++ ++ DE  Y+ L+D    A   E A  V K
Sbjct: 879  LITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYK 938

Query: 395  EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
             ME+   KP++  YS ++  Y  +    +   VL+EMK  G+ P    Y  ++ T  K  
Sbjct: 939  NMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSR 998

Query: 455  CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTY 513
             L  A   F  M  +GI  D +T+ T+I+      ++D    L ++  + +   P    +
Sbjct: 999  QLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQLP----H 1054

Query: 514  NIMINLLGEQERW 526
             +  N+L E  +W
Sbjct: 1055 ELSQNILTELNKW 1067



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 40/346 (11%)

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY----SLLIDAYANAGRWESA-RIVLKE 395
            +K Y ++   + A     +++++    ++ TY    + ++D+   A  +E A +I  K 
Sbjct: 294 FVKYYSRLNQTQTALQYFHQLQQTSQAQNDPTYYQTVNQMLDSLLKAELFEEAEQIYNKV 353

Query: 396 MEVSHAKPNSF---IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             +S  +PN      +S ++ GY       +   VL  MK  G++PD   YN +ID   K
Sbjct: 354 FTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNVLSIMKERGIKPDEVLYNSIIDGCSK 413

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            N +  A   +D ML EG+ P TIT+N+LIDC  + G  D+A  + E+M+E+   P   T
Sbjct: 414 NNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYT 473

Query: 513 YNIMINLLGEQERWEDVKR--LLGN--MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
           Y+ +   +  + + +D+++  +L N    +    P+ + +  L+D      + D A+E  
Sbjct: 474 YSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELF 533

Query: 569 EGLSDQAVNAFRVMRTDG----------------------------LKPSNLALNSLINA 600
           + L  Q+    +V  TD                             ++P  ++ N++I  
Sbjct: 534 KQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKG 593

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             ++++   AF +   MK   LKP+ VTY +L+ A +R ++ +  +
Sbjct: 594 CAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAW 639



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 164/379 (43%), Gaps = 46/379 (12%)

Query: 125  PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
            P  + ++ L + C     ++ A AV   +Q  N+  S  + Y ILI A G + +L  AF 
Sbjct: 699  PDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPS-SVTYGILIKAYGSANQLDNAFF 757

Query: 185  LSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            + ++ +   L P  +TY  LI AC +N+ +E+A+ +   M++DG   + I ++ +I+   
Sbjct: 758  VFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFA 817

Query: 240  RTNKIDSSLLQKLYKEIECD-KIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLS 297
            ++ K+D +L  ++Y+ ++ D KI+ +    N +I    +     KAM  F  M Q +  +
Sbjct: 818  KSFKLDQAL--EVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHT 875

Query: 298  -PKTATYAAVITALSNSGRTIEAEAVFEELKESGL------------------------- 331
             P   TY+ +I          +A  +  +++++ +                         
Sbjct: 876  KPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALK 935

Query: 332  ----------KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
                      KP    Y+ L+K Y K   L  A  V+ EM++ G+ P    Y+ L+    
Sbjct: 936  VYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCI 995

Query: 382  NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             + + ++A  +  +M +   + +   Y  ++ G     ++     +LK+   S V+    
Sbjct: 996  KSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFDSILILLKDASDSKVQLPHE 1055

Query: 442  FYNVMIDTFGKYNCLHHAM 460
                ++    K+N  +H M
Sbjct: 1056 LSQNILTELNKWNTDNHQM 1074


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 237/527 (44%), Gaps = 49/527 (9%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLE 210
           H+  +  E ++SIL+ A  +  K+ +A  L      +  RL   T+ +LI    +   ++
Sbjct: 128 HDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVD 187

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           KAL+L  KM++ G+  D   Y ++I  L     +  +L   LY E++  KI+ D +++  
Sbjct: 188 KALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALC--LYSEMKGFKIQPDVKIVTK 245

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK--- 327
           +I  F+K  + +    F  M + +     T  Y +V+ +L ++G   +A  + + +    
Sbjct: 246 LISSFSKEEELT--CFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGN 303

Query: 328 -------------ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
                        ++ + P +  ++ ++ G +K G L  A  +  +M R G  PD   Y+
Sbjct: 304 CIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYN 363

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID    + R + +  +L+EME S  +P SF  + I      R +      +LK+M+  
Sbjct: 364 NLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIH 423

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P       ++    K+     A      M  EG +PD + ++  +D   K    D+A
Sbjct: 424 GHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQA 483

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +LF+++  +GY P    YNI+I  L + +R  + + LL  M  +GL+P+ VTY TL+D 
Sbjct: 484 LKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDG 543

Query: 555 YGQSGRFDDA-------IE-----------------CLEGLSDQAVNAFRVMRTDGLKPS 590
             ++   ++A       IE                 C  G  D A+  +  M   G  PS
Sbjct: 544 LCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPS 603

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           ++A  + I+      R  EA   L+ M+E  +KPD   Y  L+ A +
Sbjct: 604 SIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFL 650



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 225/523 (43%), Gaps = 53/523 (10%)

Query: 169 LIHALGRSEKLYEAFLL-SQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQD 222
           LI  LG +  + EA LL  Q Q++        +Y  L+   +++  ++     + +M   
Sbjct: 36  LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDH 95

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G+  D    + V+Q      + D +L   ++ EI  D+  +D  + + +++ F+K G   
Sbjct: 96  GWGFDKYTLTPVLQVYCNMAEFDKAL--DVFNEIH-DRGWVDEYVFSILVLAFSKWGKVD 152

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KA   +   +   +     T+ ++I       R  +A  +F+++K+SG  P    Y+ ++
Sbjct: 153 KACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVII 212

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHA 401
            G      +K A  + SEM+   + PD    + LI +++   + E      +EM E    
Sbjct: 213 GGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFS---KEEELTCFFEEMHEDMDP 269

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMK----------------SSGVEPDTHFYNV 445
           K ++ +Y+ +L    D G   + + +L+ +                  + V P++  +++
Sbjct: 270 KASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSI 329

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K   L  A+  F  M   G +PD + +N LID      R   +  L +EM+E G
Sbjct: 330 VINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESG 389

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P + T N +   L  +        LL  MR  G +P +   T+LV    + G+  +A 
Sbjct: 390 IEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEAC 449

Query: 566 E-------------------CLEGL-----SDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           +                   CL+GL      DQA+  F+ +   G  P  +A N LI   
Sbjct: 450 KFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGL 509

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            + QR AEA  +L  M+E GL P  VTY TL+  L + D   +
Sbjct: 510 CKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 173/438 (39%), Gaps = 55/438 (12%)

Query: 55  SSFTSKQNDT---EEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLN 111
           SSF+ ++  T   EE  ED D     +     +  +LN L +N +   A  L  + +  N
Sbjct: 248 SSFSKEEELTCFFEEMHEDMDP----KASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGN 303

Query: 112 RV-EFKLAESYRA----VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
            + + ++ + +R      P     S++ N       +DLA  +   + +   C    LLY
Sbjct: 304 CIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIG-CKPDLLLY 362

Query: 167 SILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR- 220
           + LI  L  S +L E+  L Q         T  T N +     R  D+  AL+L+ KMR 
Sbjct: 363 NNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRI 422

Query: 221 ----------------------------------QDGYHCDFINYSLVIQSLTRTNKIDS 246
                                             ++G+  D + YS  +  L +  ++D 
Sbjct: 423 HGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQ 482

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +L  KL+++I       D    N +I G  K    ++A   L   +  GL P   TY  +
Sbjct: 483 AL--KLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTL 540

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L  +    EA      + E   +P    Y+ L+ G    G   DA  + +EM R G 
Sbjct: 541 IDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGC 600

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P    Y   I   +N GR   A + L+EME    KP++++Y  +L  +         F+
Sbjct: 601 TPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFE 660

Query: 427 VLKEMKSSGVEPDTHFYN 444
           +L+EM   G  PD H  N
Sbjct: 661 ILQEMVDKGKFPDLHDKN 678


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/538 (24%), Positives = 244/538 (45%), Gaps = 38/538 (7%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQR- 190
           L  +C ++   D A+ V+  LQ  +  ++ ++L  + L++ L  S K+  A  + ++ + 
Sbjct: 155 LIKVCVASGMFDQAFDVL--LQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKA 212

Query: 191 --LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             L P   TY   I    R  +L +A+++   M + G   +  +Y+  I+ L    + D 
Sbjct: 213 FGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDL 272

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
               K+ +++   KI +D      VI GF       +A   L   +  G +P    Y A+
Sbjct: 273 GF--KVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCAL 330

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I+     G  ++A A+ +E+   G+K      +++L+G  +MG   +      E ++ G+
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGI 390

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             DE  Y++++DA    G+ E A  +L EM+     P+   Y+ +++GY  +G+      
Sbjct: 391 FFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + +EMK  G +PD   YNV+   F +      A++  + M ++G++PDT+T N +I+   
Sbjct: 451 IYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLC 510

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+ D A+  F+ ++E+    C   Y+ M+N   E         LL  +  QG +    
Sbjct: 511 IGGKVDDAQAFFDNLEEK----CLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKA 566

Query: 547 TYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVM 582
           ++  L+      G  + A+  LE                        G  ++A   F ++
Sbjct: 567 SFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNML 626

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
              GL P  +    +IN +    +  EA+ VL  MK  G++PDV+TYT L+    ++D
Sbjct: 627 VDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKID 684



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 225/493 (45%), Gaps = 25/493 (5%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+++I       KL EA  +    ++Q   P    Y ALIS      +L KAL L  +M 
Sbjct: 292 YTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMV 351

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + +  S ++Q L++     +S +   +KE +   I  D    N V+    K G 
Sbjct: 352 SKGVKTNCVILSSILQGLSQMGM--ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGK 409

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +G  + P    Y  VI+     G+ ++A  ++ E+K+ G KP    YN 
Sbjct: 410 VEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNV 469

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L  G+ + G  ++A  +++ ME  GV PD  T++++I+     G+ + A+     +E   
Sbjct: 470 LAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKC 529

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHA 459
            +     YS ++ GY +     + F +L  +   G +     F+ ++ +   + +    A
Sbjct: 530 LEN----YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDS-EKA 584

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +   + M++  I P  I ++ +I   F+ G  ++A+ +F  + +RG  P   TY IMIN 
Sbjct: 585 LCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMING 644

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD--------DAIECLEGL 571
                + ++   +LG+M+ +G+ P+V+TYT L++      + D        DA++  E +
Sbjct: 645 YCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLN---NCSKIDLRSSSSSLDAMKSKENM 701

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            D +   +  M+   +KP  +    LI+   +     +A  +   M + GL PD VTYT 
Sbjct: 702 MDPSA-LWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTA 760

Query: 632 LMKALIRVDKFHK 644
           L+     V    K
Sbjct: 761 LLSGYCNVGNIKK 773



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 213/445 (47%), Gaps = 31/445 (6%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECD--KIEL--- 263
           A +  +++++ GY  D   Y+ +++ L     + K+DS L++ + K+   D   + L   
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 264 --DG----------QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
             DG          Q+ + +I     +G   +A   L   +  G +P+  +   ++  L 
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            S +   A A++ +LK  GL P    Y   +KG+ + G L +A  V  +ME SGV P+  
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           +Y+  I+     GR +    VL+++  +    + F Y+ ++ G+    + +    +L+EM
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G  PD + Y  +I  +     L  A+A  D M+S+G++ + +  ++++    + G  
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
                 F+E ++ G F     YN++++ L +  + E+   LL  M+ + ++P+++ YTT+
Sbjct: 376 SEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y   G+  DA+           N +R M+  G KP  +  N L   F  +    EA 
Sbjct: 436 ISGYFLKGKVVDAL-----------NIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEAL 484

Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL 636
           ++L YM+  G+KPD VT+  +++ L
Sbjct: 485 SLLNYMETQGVKPDTVTHNMIIEGL 509



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 210/500 (42%), Gaps = 57/500 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +ALI  C  +   ++A +++ + +  G+    ++ + ++  L  + K+D ++   +Y+++
Sbjct: 153 DALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAI--AIYRQL 210

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   +  +       I GF + G+ ++A+      +  G++P + +Y   I  L   GR+
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
                V +++  + +     AY  +++G+     LK+AE ++ EME+ G  PD + Y  L
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCAL 330

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  Y   G    A  +  EM     K N  I S IL G    G         KE K  G+
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGI 390

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             D   YNV++D   K   +  A+     M  + + PD I + T+I  +F  G+   A  
Sbjct: 391 FFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           ++ EM++ G+ P   TYN++          ++   LL  M  QG+ P+ VT+  +++   
Sbjct: 451 IYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLC 510

Query: 557 QSGRFDDAI--------ECLE--------------------------------------- 569
             G+ DDA         +CLE                                       
Sbjct: 511 IGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFK 570

Query: 570 --------GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                   G S++A+     M    + P+ +  + +I A  +     +A  V   + + G
Sbjct: 571 LLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG 630

Query: 622 LKPDVVTYTTLMKALIRVDK 641
           L PDV+TYT ++    R++K
Sbjct: 631 LAPDVITYTIMINGYCRMNK 650



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 200/448 (44%), Gaps = 38/448 (8%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN ++ A  +   +E+A+ L+ +M+      D INY+ VI       K+  +L   +Y+E
Sbjct: 397 YNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDAL--NIYRE 454

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++    + D    N +  GF++ G   +A+  L   +  G+ P T T+  +I  L   G+
Sbjct: 455 MKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGK 514

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A+A F+ L+E  L+     Y+A++ GY +  ++  A  ++  + + G +  + ++  
Sbjct: 515 VDDAQAFFDNLEEKCLEN----YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFK 570

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+    + G  E A  +L+ M   +  P   +YS+++      GE ++   V   +   G
Sbjct: 571 LLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG 630

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + PD   Y +MI+ + + N +  A      M + GIEPD IT+  L++    C + D   
Sbjct: 631 LAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLN---NCSKID--- 684

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
                           + +  ++ +  +E   D   L   M+   + P+V+ YT L+D +
Sbjct: 685 --------------LRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKH 730

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++    DAI           N F  M   GL P  +   +L++ +       +A  +  
Sbjct: 731 CKTNNIQDAI-----------NLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFD 779

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFH 643
            M   G++PD  T + L   +++V K H
Sbjct: 780 EMLNKGIRPDAHTMSVL-HCILKVRKVH 806



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 160/354 (45%), Gaps = 53/354 (14%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN L    +RN   ++AL+L++ M   G   D + ++++I+ L    K+D +  Q  +
Sbjct: 465 VTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDA--QAFF 522

Query: 254 KEIE--------------CD------------KIELDGQLLND-----VIVGFAKAGDAS 282
             +E              C+            ++   G++L       ++      GD+ 
Sbjct: 523 DNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSE 582

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KA+  L     + ++P    Y+ VI AL  +G   +A+ VF  L + GL P    Y  ++
Sbjct: 583 KALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            GY +M  +K+A  V+ +M+  G+ PD  TY++L++   N  + +  R     ++   +K
Sbjct: 643 NGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLN---NCSKID-LRSSSSSLDAMKSK 698

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
            N    S +         W        EMK   ++PD   Y V+ID   K N +  A+  
Sbjct: 699 ENMMDPSAL---------WS-------EMKDMDIKPDVICYTVLIDKHCKTNNIQDAINL 742

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           F+ M+  G+ PDT+T+  L+  +   G   +A  LF+EM  +G  P   T +++
Sbjct: 743 FNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 245/566 (43%), Gaps = 62/566 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LL 185
           ++ +++   C +   +D A+ ++  +++  +     LL+S LI  L R  ++ EA     
Sbjct: 113 MYTTVINGFCKAGQ-VDQAFELLDEMKERGVKMDV-LLHSTLIQGLCRKGRIDEALEQFK 170

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ-----DGYHCDFINYSLVIQSL 238
           S  +  +P  +TYN +++   + + +++AL L   M +      G   D I+YS VI +L
Sbjct: 171 SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  ++D +   + +K +       +    + +I G  K    S+ +  L   +  G   
Sbjct: 231 CKAQRVDKAY--EYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGI 288

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               + A++ AL  +    +A   FE L +SG KP    YN  + G  K G + +A  ++
Sbjct: 289 NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRIL 348

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM  S V PD  TYS +ID +  AGR + A  V   M V    P+   +  +L G+ + 
Sbjct: 349 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 408

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            + +  F+V ++M ++G  P    YNV++D     + +  A+  + +M  +  +PD  T+
Sbjct: 409 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQ-----------------------------------E 503
             LI C  +  R D A+E  + M+                                   E
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P   T+ I++  L  +++WE   +LL   R+ G + +  TY+  V    ++G+ D+
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLL---RSPGFVADAATYSLCVAEICKAGKPDE 585

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E +E            M   G++P      +++ +     R   A A  + M   G  
Sbjct: 586 AVEVIEQ-----------MVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCA 634

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P +VTYT L+      D   + F  +
Sbjct: 635 PGLVTYTLLIGEACSADMADEAFRIF 660



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 39/323 (12%)

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           + G   + +T ++L++A+  A R E A  +LKE       PN  +Y+ ++ G+   G+  
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           + F++L EMK  GV+ D   ++ +I    +   +  A+  F  M  E   P+ IT+NT++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVV 187

Query: 483 DCHFKCGRYDRAEELFEEMQER-----GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +   K  R D A ELF++M++R     G  P   +Y+ +I+ L + +R +        MR
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL-------------------------- 571
           A G  PNVVTY++L+D      + D   ECLE L                          
Sbjct: 248 AVGCAPNVVTYSSLID---GLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 572 -SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             ++A   F  +   G KP+ +  N  ++   +  R  EA+ +L  M E+ + PDV+TY+
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 631 TLMKALI---RVDKFHKVFSSYL 650
           +++       R+DK   VF+  +
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMM 387



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 204/475 (42%), Gaps = 25/475 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LLS 186
           + +++  LC +   +D AY     ++    C    + YS LI  L + ++  E    LL 
Sbjct: 223 YSTVIDALCKAQR-VDKAYEYFKRMRAVG-CAPNVVTYSSLIDGLCKVDRPSECLELLLH 280

Query: 187 QRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +++   +  + +NA++ A  +ND+ EKA     ++ + G   + + Y++ +  L +  +
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGR 340

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   ++  E+   K+  D    + +I GF KAG   KA             P   T+
Sbjct: 341 VDEAY--RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++   S   ++ EA  V E++  +G  P  + YN L+        ++ A  +  +M+R
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 458

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               PD +TY+ LI     A R + A+  L  ME  +  PN  I   ++     +GE   
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 518

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLI 482
              VL  +   G +P    + ++++       L     A  ++L S G   D  T++  +
Sbjct: 519 ACSVLDNVVEVGCQPLGETFKILVEELY----LRKKWEAASKLLRSPGFVADAATYSLCV 574

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K G+ D A E+ E+M  +G  P   TY  ++  L   +R E        M ++G  
Sbjct: 575 AEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCA 634

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           P +VTYT L+   G++        C   ++D+A   F  M   G  P    + +L
Sbjct: 635 PGLVTYTLLI---GEA--------CSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 152/384 (39%), Gaps = 30/384 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G      T A ++ A   + R  EA  + +E  E    P    Y  ++ G+ K G +  A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             ++ EM+  GV  D   +S LI      GR + A    K M      PN   Y+ ++ G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNTVVNG 189

Query: 415 YRDRGEWQRTFQVLKEMK-----SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
                      ++  +M+     S G EPD   Y+ +ID   K   +  A   F RM + 
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  P+ +T+++LID   K  R     EL   M+E+G+      +N M++ L + +  E  
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------------------- 566
            +    +   G  PNVVTY   V    ++GR D+A                         
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369

Query: 567 -CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C  G  D+A + F  M      P  +   +L++ F E ++  EAF V + M   G  P 
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           + TY  LM  +   D        Y
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIY 453



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/387 (21%), Positives = 148/387 (38%), Gaps = 49/387 (12%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           R+  ++ ES        + S++   C +   +D A  V + +  H  C  + + +  L+H
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGR-MDKADDVFTRMMVHE-CIPHPVTFMTLLH 403

Query: 172 ALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
                +K  EAF + +        P   TYN L+      D +E AL +  KM++     
Sbjct: 404 GFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 463

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D   Y+ +IQ L R  ++D                                     +A  
Sbjct: 464 DCNTYAPLIQCLCRARRVD-------------------------------------EAKE 486

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL + +   + P  A   A++  L   G   EA +V + + E G +P  + +  L++   
Sbjct: 487 FLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL- 545

Query: 347 KMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
              YL+      S++ RS G + D  TYSL +     AG+ + A  V+++M +   +P+ 
Sbjct: 546 ---YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDE 602

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y  +L         +      ++M S G  P    Y ++I      +    A   F+ 
Sbjct: 603 GTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEA 662

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYD 492
           M++ G  P   T  TL  C    G  D
Sbjct: 663 MVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 213/478 (44%), Gaps = 32/478 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY ALI     N  + +    +  M +          S +++ L R   ++ +L   ++ 
Sbjct: 127 TYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKAL--SIFY 184

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNS 313
           +++  K        N VI+   + G   K       M       P T TY+A+I+A    
Sbjct: 185 QVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKL 244

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R   A  +F+E+KE+GL+P  K Y  L+  Y K+G +++A  +V EM     +P  +TY
Sbjct: 245 NRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTY 304

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL--AGYRDRGEWQRTFQVLKEM 431
           + LI     +GR E A  V K M     KP+  + + ++   G  DR   +   ++ +EM
Sbjct: 305 TELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDR--LKEAVELFEEM 362

Query: 432 KSSGVEPDTHFYNVMIDT-FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +     P+   YN +I + F        A +  +RM  +G+ P + T++ LID   K  R
Sbjct: 363 RLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNR 422

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            ++A  L EEM E+G+ PC   Y  +IN LG+ +R+E    L   ++      +V  Y  
Sbjct: 423 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAV 482

Query: 551 LVDIYGQSGRFDDA---------IECLEG---------------LSDQAVNAFRVMRTDG 586
           ++  +G+ GRF++A         + C+                 + D+A + FR M  +G
Sbjct: 483 MIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             P   + N ++N          A  +   MK + +KPD V+Y T++  L R   F +
Sbjct: 543 CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 213/490 (43%), Gaps = 60/490 (12%)

Query: 167 SILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           S ++  LGR + + +A  +      ++ R T  TYN++I    +    EK   L ++M  
Sbjct: 164 SEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCS 223

Query: 222 DGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +G HC  D + YS +I +  + N+ DS++  +L+ E++ + ++   ++   ++  + K G
Sbjct: 224 EG-HCFPDTVTYSALISAFGKLNRDDSAV--RLFDEMKENGLQPTAKIYTTLMGIYFKLG 280

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A+  +   +     P   TY  +I  L  SGR  +A  V++ + + G KP     N
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340

Query: 340 ALLKGYVKMGYLKDAEFVVSEM------------------------------------ER 363
            L+    +   LK+A  +  EM                                    ++
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKK 400

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GV+P   TYS+LID +    R E A ++L+EM+     P    Y  ++        ++ 
Sbjct: 401 DGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEA 460

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++ +E+K +        Y VMI  FGK    + AM  F+ M   G  PD   +N LI 
Sbjct: 461 ANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALIT 520

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              +    D A  LF  M+E G  P   ++NI++N L      +    +   M++  + P
Sbjct: 521 GMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKP 580

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG- 602
           + V+Y T++    ++G F++A + +           + M + G +   +  +S++ A G 
Sbjct: 581 DAVSYNTVLGCLSRAGLFEEATKLM-----------KEMNSKGFEYDLITYSSILEAVGK 629

Query: 603 --EDQRDAEA 610
             ED+  AE+
Sbjct: 630 VDEDRNMAES 639



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 191/405 (47%), Gaps = 8/405 (1%)

Query: 159 CYSYELLYSILIHALG---RSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A G   R +     F   +   L P    Y  L+    +   +E+AL
Sbjct: 227 CFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEAL 286

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           NL+ +MR          Y+ +I+ L ++ +++ +    +YK +  D  + D  L+N++I 
Sbjct: 287 NLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAY--GVYKNMLKDGCKPDVVLMNNLIN 344

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL-SNSGRTIEAEAVFEELKESGLK 332
              ++    +A+      + +  +P   TY  +I +L  +     EA +  E +K+ G+ 
Sbjct: 345 ILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVV 404

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LI++   A R+E+A  +
Sbjct: 405 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANEL 464

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +E++ +    +  +Y+ ++  +   G +     +  EMK  G  PD + YN +I    +
Sbjct: 465 FQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVR 524

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            + +  A + F  M   G  PD  + N +++   + G   RA E+F +M+     P   +
Sbjct: 525 ADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVS 584

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           YN ++  L     +E+  +L+  M ++G   +++TY+++++  G+
Sbjct: 585 YNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 13/248 (5%)

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHA 459
            +P +  Y+ ++      G  ++  ++  EM S G   PDT  Y+ +I  FGK N    A
Sbjct: 191 CRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSA 250

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  FD M   G++P    + TL+  +FK G+ + A  L  EM+ R   P   TY  +I  
Sbjct: 251 VRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRG 310

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           LG+  R ED   +  NM   G  P+VV    L++I G+S R  +A+E            F
Sbjct: 311 LGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVE-----------LF 359

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQR-DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             MR     P+ +  N++I +  ED+   +EA + L+ MK++G+ P   TY+ L+    +
Sbjct: 360 EEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCK 419

Query: 639 VDKFHKVF 646
            ++  K  
Sbjct: 420 TNRVEKAL 427


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 179/386 (46%), Gaps = 15/386 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I GF+K G+  KA       +  G+ P   TY+++I  L  +    +AE V  ++  
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +G++P    YN L+ GY   G  K++  V  EM  S ++PD    +  + A    GR + 
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 276

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           AR +   M +   KP+   Y  +L GY   G       +   M   GV PD H +N +I+
Sbjct: 277 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 336

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            + +   +  ++  F+ M  +G+ PD IT++T+I    + GR D A E F  M + G  P
Sbjct: 337 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 396

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT-YTTLVDIYGQSGRFDDAIEC 567
            T  Y+ +I     +      K L+ +M ++G+ P  +  +T++++             C
Sbjct: 397 DTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNL-----------C 445

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
            EG   +  +   ++   G +P+ +  NSL++ +       EA  +L  M+  G++PD+ 
Sbjct: 446 KEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIY 505

Query: 628 TYTTLMKALI---RVDKFHKVFSSYL 650
           TY TL+       R+D    +F   L
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDML 531



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 119/546 (21%), Positives = 231/546 (42%), Gaps = 56/546 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SL+  LC +   +D A  V+  +    +     + Y+ LIH    S    E+  + + 
Sbjct: 191 YSSLINGLCKT-KEMDKAERVLRQMVGAGV-RPNNMTYNCLIHGYSTSGMWKESVRVFKE 248

Query: 189 QRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + L       N+ ++A  ++  +++A ++   M   G   D I+Y  ++        
Sbjct: 249 MSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGC 308

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I    +  L+  + C+ +  D  + N +I  +A+ G   K++         G++P   T+
Sbjct: 309 IAG--MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF 366

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + VI+A    GR  +A   F  + ++G+ P T  Y+ L++G      L  A+ ++S+M  
Sbjct: 367 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 426

Query: 364 SGVLPD-EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            G+ P     ++ +I+     GR    + V+  +  +  +PN   ++ ++ GY   G  +
Sbjct: 427 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 486

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               +L  M+S GVEPD + YN ++D + K+  +  A+  F  ML + +   ++++N ++
Sbjct: 487 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 546

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFP----------------CT---------------- 510
              F+  R   A+E+F EM E G                   CT                
Sbjct: 547 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 606

Query: 511 ---TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               T+NI+I  + +  R ++ K L   +   GL+P ++TY  ++    +   F+D    
Sbjct: 607 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFED---- 662

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                  A N F  M      P +  LN +I         A+A   L  + + G+ P+  
Sbjct: 663 -------ADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEAT 715

Query: 628 TYTTLM 633
           T + L+
Sbjct: 716 TTSLLI 721



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 21/298 (7%)

Query: 114 EFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH-NLCYSYELL------- 165
           E ++AE    V   +      NL + NS +D  Y +V  +++   L  S E +       
Sbjct: 447 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVD-GYCLVGNMKEAVGLLDSMESVGVEPDIY 505

Query: 166 -YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
            Y+ L+    +  ++ +A      +L +R  LT ++YN ++    +      A  +  +M
Sbjct: 506 TYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + G       Y+ V+  L R N  D +  LL+KL+       ++ D    N VI    K
Sbjct: 566 IESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSM----NVKFDILTFNIVIRAMFK 621

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A          GL P   TY  +IT L       +A+ +F  +++S   P ++ 
Sbjct: 622 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            N +++  +  G +  A   +S++++ G+LP+  T SLLI  ++  G++     +L E
Sbjct: 682 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/320 (19%), Positives = 129/320 (40%), Gaps = 18/320 (5%)

Query: 122 RAVPAP---LWHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175
           + +P P    + S++ NLC         D+   ++   Q+ NL     + ++ L+     
Sbjct: 427 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL-----ITFNSLVDGYCL 481

Query: 176 SEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
              + EA  L        +     TYN L+    ++  ++ AL L   M         ++
Sbjct: 482 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 541

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++++  L +  +  + + ++++ E+    + +       V+ G  +     +A   L  
Sbjct: 542 YNIILHGLFQARR--TIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEK 599

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
              + +     T+  VI A+   GR  EA+ +F  +   GL P    Y  ++   +K   
Sbjct: 600 LFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEES 659

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
            +DA+ + S ME+S   PD    + +I    N G    A   L +++     P +   S 
Sbjct: 660 FEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSL 719

Query: 411 ILAGYRDRGEWQRTFQVLKE 430
           ++  +   G+++   ++L E
Sbjct: 720 LIYLFSVNGKYREYIKLLPE 739



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P + TY  L++ Y ++ R D  +              R++RT GL P   + N+LI+ F 
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFG----------RLLRT-GLGPDVFSYNALIDGFS 164

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           ++    +A  +   M+E G+ P+VVTY++L+  L +  +  K
Sbjct: 165 KEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDK 206


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 213/476 (44%), Gaps = 20/476 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ILI AL ++ +L  A L+ +       R    T+  L+       D+E AL +   M 
Sbjct: 202 FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMV 261

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     ++ ++++  L +  +I+ +L + +Y+E   +    D    N ++ G  + G 
Sbjct: 262 ESGCELTSVSVNVLVNGLCKEGRIEEAL-RFIYEE---EGFCPDQVTFNALVNGLCRTGH 317

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             + +  +      G      TY ++I+ L   G   EA  +   +     +P T  YN 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K  +++ A  +   +   GVLPD  T++ LI         E A  + +EM+   
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ F YS ++         +    +LKEM+ SG   +   YN +ID   K N +  A 
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD+M   G+   ++T+NTLI+   K  R + A +L ++M   G  P   TY  M+   
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +Q   +    ++ NM   G  P++VTY TL+    ++GR D A + L           R
Sbjct: 558 CQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL-----------R 606

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            ++  G+  +  A N +I A  + +R  EA  + + M E G  PDV+TY  + + L
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGL 662



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 195/445 (43%), Gaps = 31/445 (6%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y++ +  L + NK+   L++ L+ ++  D +  D    N +I    KA     A+  L  
Sbjct: 167 YNVALSLLVKANKL--KLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLED 224

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   T+  ++           A  + E + ESG +  + + N L+ G  K G 
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGR 284

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A   + E E  G  PD+ T++ L++     G  +    ++  M     + + + Y+ 
Sbjct: 285 IEEALRFIYEEE--GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNS 342

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++G    GE     ++L  M S   EP+T  YN +I T  K N +  A      + S+G
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKG 402

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + PD  T+N+LI         + A ELFEEM+E+G  P   TY+I+I  L  + R ++  
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
            LL  M   G   NVV Y TL+D   ++ R  DA +                        
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGL 522

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C     ++A      M  +GLKP      +++  F +      A  ++Q M  NG +PD+
Sbjct: 523 CKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDI 582

Query: 627 VTYTTLMKALI---RVDKFHKVFSS 648
           VTY TL+  L    RVD   K+  S
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRS 607



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 159/368 (43%), Gaps = 47/368 (12%)

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           ++  +KP T+ YN  L   VK   LK  E + S+M    V PD  T+++LI A   A + 
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE--------- 437
             A ++L++M     +P+   ++ ++ G+ +  + +   ++ + M  SG E         
Sbjct: 216 RPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVL 275

Query: 438 ------------------------PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                                   PD   +N +++   +   +   +   D ML +G E 
Sbjct: 276 VNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL 335

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+N+LI    K G  D A E+   M  R   P T TYN +I  L ++   E    L 
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELA 395

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             + ++G+LP+V T+ +L+              CL    + A+  F  M+  G  P    
Sbjct: 396 RVLTSKGVLPDVCTFNSLIQGL-----------CLTSNREIAMELFEEMKEKGCDPDEFT 444

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
            + LI +   ++R  EA  +L+ M+ +G   +VV Y TL+  L    K ++V  +   F+
Sbjct: 445 YSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLC---KNNRVGDAEDIFD 501

Query: 654 IYKMLSYS 661
             +ML  S
Sbjct: 502 QMEMLGVS 509



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 124/312 (39%), Gaps = 35/312 (11%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++SL++ LC + S+ ++A  +   +++   C   E  YSILI +L    +L EA +L + 
Sbjct: 410 FNSLIQGLCLT-SNREIAMELFEEMKEKG-CDPDEFTYSILIESLCSERRLKEALMLLKE 467

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
             L         S CARN                      + Y+ +I  L + N++  + 
Sbjct: 468 MEL---------SGCARN---------------------VVVYNTLIDGLCKNNRVGDA- 496

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
            + ++ ++E   +       N +I G  K+    +A + +      GL P   TY  ++ 
Sbjct: 497 -EDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                G    A  + + +  +G +P    Y  L+ G  K G +  A  ++  ++  G++ 
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL 615

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEWQRTFQV 427
               Y+ +I A     R + A  + +EM      P+   Y  +  G     G  Q     
Sbjct: 616 TPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF 675

Query: 428 LKEMKSSGVEPD 439
             EM   G+ P+
Sbjct: 676 TVEMLEKGILPE 687


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 214/463 (46%), Gaps = 16/463 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N +I    +  +L +A +L S+M++ G   D + ++ +I    +  ++D   +++L +
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE--VEQLVE 247

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+     + D    N +I  F K G    A  +    +  G+     T++  + A    G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  +F +++  G+      Y  L+ G  K G L DA  ++ EM R GV  +  TY+
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYT 367

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D      +   A  VL+ ME +  + N  +Y+ ++ G+      ++   +L EMK+ 
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E D   Y  +I      + L  A +   +M   G+EP+ I + T++D  FK G+   A
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + +++ + G+ P   TY  +I+ L +    ++       MR  GL PNV  YT LVD 
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++G       CL    ++AV  F  M   G+    +   +L++ + +     +AFA+ 
Sbjct: 548 LCKNG-------CL----NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 596

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYLFFNI 654
             M ++GL+ D+  YT  +     ++      +VFS  +   I
Sbjct: 597 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 639



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 167/410 (40%), Gaps = 59/410 (14%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   T+  VI  L   G   EA ++F  +KE G  P    +N+L+ GY K G L + E 
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESA--------------------------- 389
           +V EM RSG   D  TY+ LI+ +   GR E+A                           
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 390 -----RIVLK---EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                R  +K   +M V     N F Y+ ++ G    G       +L EM   GV  +  
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y V++D   K   +  A      M   G+  + + + TLI  HF     ++A  L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           + +G     + Y  +I  L    + ++ K LL  M   GL PN + YTT++D   +SG+ 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +AI                         C  G  D+A++ F  MR  GL P+  A  +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           ++   ++    EA  +   M   G+  D V YT L+   ++    H  F+
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 185/412 (44%), Gaps = 7/412 (1%)

Query: 159 CYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C +  + Y+ LI+     GR E  Y  F   +R+ +    +T++  + A  +   + +A+
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L ++MR  G   +   Y+ +I    +  ++D +++  L  E+    + L+      ++ 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV--LLDEMVRQGVPLNVVTYTVLVD 371

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  K    ++A   L M +  G+      Y  +I     +  + +A  +  E+K  GL+ 
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y AL++G   +  L +A+ ++++M+ SG+ P+   Y+ ++DA   +G+   A  +L
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +++  S  +PN   Y  ++ G    G          +M+  G++P+   Y  ++D   K 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
            CL+ A+  F+ M+ +G+  D + +  L+D + K G    A  L  +M + G       Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
              I+         + + +   M   G+ P+   Y  L+  Y + G  ++AI
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 160/381 (41%), Gaps = 20/381 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E  Y+ LI    ++ +L +A +L      Q   L  +TY  L+    +   + +A +++ 
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y+ +I         + +L   L  E++   +ELD  L   +I G   
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMNKNSEKAL--GLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A   L      GL P    Y  ++ A   SG+  EA A+ +++ +SG +P    
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+ G  K G + +A    ++M   G+ P+   Y+ L+D     G    A  +  EM 
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 +  +Y+ +L GY  +G     F +  +M  SG++ D   Y   I  F   N + 
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT------- 510
            A   F  M+  GI PD   +N LI  + K G  + A  L +EM ER    CT       
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM-ERVLPSCTDSDTATD 684

Query: 511 -----TTYNIMINLLGEQERW 526
                TT  I   +LG   ++
Sbjct: 685 AGSVCTTKCIRCQILGSTPKF 705



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 28/256 (10%)

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +   +L+   DRG      + +  ++   V P+T   N ++    +      +     R+
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRL 179

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +   P+  T+N +ID   K G    A  LF  M+E G  P   T+N +I+  G+    
Sbjct: 180 FEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
           ++V++L+  MR  G   +VVTY  L++ + + GR + A                      
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EGL  +A+  F  MR  G+  +      LI+   +  R  +A  +L  M   G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 623 KPDVVTYTTLMKALIR 638
             +VVTYT L+  L +
Sbjct: 360 PLNVVTYTVLVDGLCK 375


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 221/506 (43%), Gaps = 57/506 (11%)

Query: 147 YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTPLT--YNALIS 201
           + ++  + ++ +C       S ++  LG ++ + +A   F   + ++  P+   YN++I 
Sbjct: 110 WKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMII 169

Query: 202 ACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
                   EK   L ++M  +G HC  D + YS +I +  +  + DS++           
Sbjct: 170 MLMHEGQYEKVHQLYNEMSTEG-HCFPDTVTYSALISAFCKLGRRDSAI----------- 217

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
                 QLLN++                    + +G+ P T  Y  +I           A
Sbjct: 218 ------QLLNEM--------------------KEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
            ++FEE++    +P    Y  L++G  K G + +A     EM+R G  PD    + +I+ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEP 438
              AGR + A  + +EME     P+   Y+ I+ A +  +          + MK SG+ P
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
            +  Y+++ID F K N +  AM   + M  +G  P    + +LID   K  RYD A ELF
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +E++E         Y +MI  LG+  R +D   +   M   G  P+V  Y  L+    ++
Sbjct: 432 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 491

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G           + D+A++  R M+  G  P   + N ++N   +      A  +L  MK
Sbjct: 492 G-----------MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 540

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHK 644
           ++ ++PDVV+Y T++ AL     F +
Sbjct: 541 QSTVRPDVVSYNTVLGALSHAGMFEE 566



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 8/405 (1%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A   LGR +   +     +   + P T  Y  LI+   + +D   AL
Sbjct: 193 CFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGAL 252

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L  +MR      D   Y+ +I+ L +  +ID +     + E++ +    D   +N++I 
Sbjct: 253 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAY--HFFCEMQREGCRPDTVFMNNMIN 310

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESGLK 332
              KAG    AM+     + +   P   TY  +I AL  S  R  E  + FE +KESG+ 
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 370

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LIDA   A R++ A  +
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +E++ +    ++ +Y+ ++      G       +  EM   G  PD + YN ++    +
Sbjct: 431 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 490

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              L  A++   RM   G  PD  ++N +++   K G   RA E+   M++    P   +
Sbjct: 491 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 550

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           YN ++  L     +E+  +L+  M   G   +++TY+++++  G+
Sbjct: 551 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 199/447 (44%), Gaps = 18/447 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +Y  +  +L+H  G+ EK+++ +  +S      P  +TY+ALISA  +    + A+ L++
Sbjct: 163 AYNSMIIMLMHE-GQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 221

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M++ G       Y+++I    + N    +L   L++E+       D     ++I G  K
Sbjct: 222 EMKEIGMQPTTKIYTMLIALFFKFNDAHGAL--SLFEEMRHQYCRPDVFTYTELIRGLGK 279

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A  F    Q  G  P T     +I  L  +GR  +A  +F+E++     P    
Sbjct: 280 AGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVT 339

Query: 338 YNALLKG-YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           YN ++K  +       +       M+ SG+ P   TYS+LID +    R E A ++L+EM
Sbjct: 340 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 399

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +     P    Y  ++        +    ++ +E+K +        Y VMI   GK   L
Sbjct: 400 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 459

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  FD M   G  PD   +N L+    + G  D A      MQE G  P   +YNI+
Sbjct: 460 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 519

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +N L +         +L NM+   + P+VV+Y T++     +G F++A + +        
Sbjct: 520 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLM-------- 571

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGE 603
              + M T G +   +  +S++ A G+
Sbjct: 572 ---KEMNTLGFEYDLITYSSILEAIGK 595



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 33/294 (11%)

Query: 87  LLNFLSENSNSESASALASSPSSL---------NRVEFKLAESY-RAVPAPLWHSLLKNL 136
           ++NFL +    + A  L     +L         N +   L ES  RA   P W   +K  
Sbjct: 308 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 367

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELL--------------YSILIHALGRSEKLYEA 182
             S SS   +  +  + + + +  +  LL              Y  LI ALG++++   A
Sbjct: 368 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 427

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             L Q  +      +   Y  +I    +   L+ A+N+  +M + G   D   Y+ ++  
Sbjct: 428 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 487

Query: 238 LTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           L RT  +D +L   +  +E  C     D    N ++ G AK G   +AM  L   +   +
Sbjct: 488 LARTGMLDEALSTMRRMQEHGCIP---DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTV 544

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            P   +Y  V+ ALS++G   EA  + +E+   G +     Y+++L+   K+ +
Sbjct: 545 RPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 226/494 (45%), Gaps = 59/494 (11%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQ------RLTPLTYNALISA-CARNDDLEK 211
           C  + + Y+  I  L R  +L+ A    +R        L P TY+  ISA C+  +++  
Sbjct: 41  CRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINL 100

Query: 212 AL--NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            L  +L+  M   G+  D   ++  +  L R N+++++L  +L+  +             
Sbjct: 101 PLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETAL--ELFHSM------------- 145

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
                       SK           G  P   +Y  +I AL N+ R  EA  V+  L + 
Sbjct: 146 -----------PSK-----------GRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDK 183

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P  KA  AL+ G    G +  A  +V  + + GV  +   Y+ LID +   GR + A
Sbjct: 184 GLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKA 243

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M  +   P+   Y+ +L    + G      ++++ M+ SGVEPD + YN ++  
Sbjct: 244 MKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKG 303

Query: 450 FGKYNCLHHA-MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           F K N +  A +   +RM ++G+  D +++NT+I    K  R  +  ELFEEM  +G  P
Sbjct: 304 FCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRP 362

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              T+NI+I+    +     VK+LL  M    +LP+ + YT +VD   ++G+ D      
Sbjct: 363 DMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVD------ 416

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                 A + FR M  +G+ P  ++ N+L+N F +  R  +A  +   M+  GL PD VT
Sbjct: 417 -----VAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471

Query: 629 YTTLMKALIRVDKF 642
           Y  ++  LIR  K 
Sbjct: 472 YKLIVGGLIRGKKI 485



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 33/391 (8%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS-------- 247
           +N  ++   R + LE AL L   M   G   D ++Y+++I +L    + D +        
Sbjct: 122 FNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181

Query: 248 -------------------------LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
                                    L  +L   +    ++++  + N +I GF + G   
Sbjct: 182 DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVD 241

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           KAM+        G  P   TY  ++      G   EA  + E ++ SG++P   +YN LL
Sbjct: 242 KAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELL 301

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           KG+ K   +  A  ++ E  ++  + D  +Y+ +I A+  A R      + +EM     +
Sbjct: 302 KGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIR 361

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+   ++ ++  +   G      ++L EM    V PD  FY  ++D   K   +  A + 
Sbjct: 362 PDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSV 421

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           F  M+  G+ PD I++N L++   K  R   A  LF+EMQ +G +P   TY +++  L  
Sbjct: 422 FRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            ++     R+   M  +G   N     TLV+
Sbjct: 482 GKKISLACRVWDQMMERGFTLNRHLSETLVN 512



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 149/354 (42%), Gaps = 49/354 (13%)

Query: 295 GLSPKTATYAAVITALSNSGRTIE---AEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           G S    TY+  I+AL ++   I      ++  ++   G  P   A+N  L    +   L
Sbjct: 76  GFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRL 135

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  +   M   G  PD  +Y+++IDA  NA R++ A  V                   
Sbjct: 136 ETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV------------------- 176

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
                    W+R       +   G+ PD      ++        +  A      ++  G+
Sbjct: 177 ---------WRR-------LIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGV 220

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           + +++ +N LID   + GR D+A ++   M   G  P   TYNI++N   E+   ++  R
Sbjct: 221 KVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVR 280

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L+  M   G+ P++ +Y  L+  + ++   D A           +     M+T G+    
Sbjct: 281 LVETMERSGVEPDLYSYNELLKGFCKANMVDRA----------HLMMVERMQTKGM-CDV 329

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           ++ N++I AF + +R  + + + + M   G++PD+VT+  L+ A +R    H V
Sbjct: 330 VSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVV 383


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 205/449 (45%), Gaps = 22/449 (4%)

Query: 192 TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--S 247
           TP  L +N ++++  + +    A++L  ++  +G     +  ++++     T  I    S
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +L K+ K       E +      +I G    G A +A+ F       G      +YA ++
Sbjct: 67  ILTKILKM----GYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILM 122

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L   G   E  A  + L+++ +      Y+ ++    K  ++ DA  + SEM   G+ 
Sbjct: 123 NGLCKMG---ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIF 179

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+ +T+S+L+DA     + + A  +L  M     KPN   Y  I+ GY    +  +   +
Sbjct: 180 PNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNI 239

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M   GVEP+   YN++I+   K   +  AM  F  M  + I PD +T+N LID   K
Sbjct: 240 FNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G+   + EL +EM+  G      TYN +++ L +    +    L+  ++ QG+ PNV T
Sbjct: 300 LGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           YTTL+D   + GR +DA              F+ + T+G   +    N +IN   +    
Sbjct: 360 YTTLIDGLCKDGRLEDAYV-----------IFQEILTEGYHITVWTYNVMINGLCKKGLF 408

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            EA A+L  M++N   PD V+Y T++ AL
Sbjct: 409 DEALALLSRMEDNACIPDAVSYETIIYAL 437



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 169/366 (46%), Gaps = 5/366 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+  LI     N    +AL     +   G+  D ++Y++++  L +  +  +++ Q L 
Sbjct: 81  ITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM-QMLR 139

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K      +  D  + + +I    K    + A R        G+ P   T++ ++ AL   
Sbjct: 140 KT----WVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKD 195

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  +A  +   + + G+KP    Y A++ GY  +  +  A  + + M + GV P+   Y
Sbjct: 196 RKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCY 255

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +++I+      R + A  + KEM      P+   Y+ ++ G    G+   + +++ EM+S
Sbjct: 256 NIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRS 315

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G   D   YN ++    K + L  A+     +  +GI+P+  T+ TLID   K GR + 
Sbjct: 316 IGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLED 375

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  +F+E+   GY     TYN+MIN L ++  +++   LL  M     +P+ V+Y T++ 
Sbjct: 376 AYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIY 435

Query: 554 IYGQSG 559
              + G
Sbjct: 436 ALSEKG 441



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/480 (22%), Positives = 205/480 (42%), Gaps = 25/480 (5%)

Query: 86  PLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDL 145
           P+L F   N    S   +   P++++   F+  E     P+ +  ++L N       I  
Sbjct: 9   PILQF---NHILASLVKINHYPTAISL--FRQLEFNGIKPSIVTLTILMNCYCHTGGITF 63

Query: 146 AYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFL-----LSQRQRLTPLTYN 197
            +++++ + K      YE   + ++ LI  +  + + YEA L     ++   +L  ++Y 
Sbjct: 64  LFSILTKILK----MGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYA 119

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            L++   +  +   A   M  +R+   + D + YS +I SL +   +  +   +LY E+ 
Sbjct: 120 ILMNGLCKMGETRAA---MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDA--YRLYSEMI 174

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I  +    + ++    K     +AM  L M    G+ P   TY A++       +  
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F  + + G++P    YN ++ G  K   + +A  +  EM    + PD  TY++LI
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D     G+  ++  ++ EM       +   Y+ +L          +   ++KE+K  G++
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y  +ID   K   L  A   F  +L+EG      T+N +I+   K G +D A  L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL---LPNVVTYTTLVDI 554
              M++    P   +Y  +I  L E+       +LL  M  +GL   L   V  TT+ D+
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADL 474



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 174/370 (47%), Gaps = 14/370 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++    K      A+      +  G+ P   T   ++    ++G      ++  ++ +
Sbjct: 14  NHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILK 73

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G +P +  +  L+KG    G   +A      +   G   D+ +Y++L++     G   +
Sbjct: 74  MGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRA 133

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L++  V+    +  +YS I+            +++  EM + G+ P+ + +++++D
Sbjct: 134 AMQMLRKTWVN---ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVD 190

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K      AM     M+ +G++P+ +T+  ++D +    + ++A  +F  M + G  P
Sbjct: 191 ALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP 250

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YNI+IN L +++R ++   L   M  + + P+VVTY  L+D   + G+   ++E  
Sbjct: 251 NVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE-- 308

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
             L D+       MR+ G     +  NSL++A  ++    +A  +++ +K+ G++P+V T
Sbjct: 309 --LVDE-------MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCT 359

Query: 629 YTTLMKALIR 638
           YTTL+  L +
Sbjct: 360 YTTLIDGLCK 369



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 144/310 (46%), Gaps = 14/310 (4%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +N +L   VK+ +   A  +  ++E +G+ P   T ++L++ Y + G       +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +PNS  ++ ++ G    G+          + + G + D   Y ++++   K
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +    AA   +    +  D + ++T+ID   K      A  L+ EM  +G FP   T
Sbjct: 128 ---MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           ++I+++ L +  + +    LL  M  +G+ PNVVTY  ++D Y           CL    
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGY-----------CLVNQV 233

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           ++A+N F VM  +G++P+    N +IN   + +R  EA  + + M    + PDVVTY  L
Sbjct: 234 NKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNIL 293

Query: 633 MKALIRVDKF 642
           +  L ++ K 
Sbjct: 294 IDGLCKLGKI 303



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 116/255 (45%), Gaps = 23/255 (9%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P    ++ ILA       +     + ++++ +G++P      ++++ +     +    + 
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
             ++L  G EP++IT+ TLI      G+   A    + +   G+     +Y I++N L +
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV- 581
                   ++L   R   +  +VV Y+T++D   + G+F               +A+R+ 
Sbjct: 128 MGETRAAMQML---RKTWVNADVVMYSTIIDSLCK-GKF-------------VTDAYRLY 170

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M   G+ P+    + L++A  +D++  +A  +L  M + G+KP+VVTY  +M     V
Sbjct: 171 SEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLV 230

Query: 640 DKFHKVFSSYLFFNI 654
           ++ +K  +    FN+
Sbjct: 231 NQVNKALN---IFNV 242


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 207/452 (45%), Gaps = 17/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    +Y  LI        + +AL L+  M QDG   +   Y+L+I+ L +  +I  +  
Sbjct: 157 RRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGA-- 214

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           +++ +E+    +       N +I G+ K+G    A+    + +  G +P   TY  +I  
Sbjct: 215 RRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYG 274

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L    +  EAE +  +    G  P    +  ++ GY K   + DA  V + M  S    D
Sbjct: 275 LCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLD 333

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y +LI+      R++ A+  + EM  +   PN  IY+ I+ GY   G+     +V +
Sbjct: 334 LQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR 393

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M+  G  P+   Y+ +I    +   LH AMA   +M  +GI P  IT+ TLI    K  
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 453

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +D A  LFE M++ G  P    YN++ + L +  R E+    L     +G++   VTYT
Sbjct: 454 EFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYT 510

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +LVD + ++G  D A   +E            M  +G K  +   + L+ A  + ++  E
Sbjct: 511 SLVDGFSKAGNTDFAAVLIEK-----------MVNEGCKADSYTYSVLLQALCKQKKLNE 559

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A ++L  M  +G+K ++V YT ++  +I+  K
Sbjct: 560 ALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 219/494 (44%), Gaps = 15/494 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + ++ +I+   ++E++ +A      +LS   +L    Y  LI+   +    ++A   +S+
Sbjct: 300 ITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSE 359

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +G   + + Y+ +I    +  K+ ++L  ++++ +E +    +    + +I G  + 
Sbjct: 360 MFANGLAPNVVIYTSIIDGYCKVGKVGAAL--EVFRLMEHEGCRPNAWTYSSLIYGLIQD 417

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               KAM  +   Q  G++P   TY  +I           A  +FE ++++GL P  +AY
Sbjct: 418 QKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAY 477

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L     K G    AE   S + R GV+  + TY+ L+D ++ AG  + A +++++M  
Sbjct: 478 NVLTHALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 534

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              K +S+ YS +L     + +      +L +M  SGV+ +   Y ++I    K     H
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDH 594

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F+ M+S G +P   T+   I  + K G+ + AE L  EM+  G  P   TYN+ IN
Sbjct: 595 AKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-----D 573
             G     +     L  M      PN  TY  L+  + +    D       G+      D
Sbjct: 655 GCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M   GL P+ +  +S+I  F +  R  EA  +  +M+   + P+   YT L+
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774

Query: 634 KALIRVDKFHKVFS 647
           K    +  F K  S
Sbjct: 775 KCCCDIKLFGKAVS 788



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 206/464 (44%), Gaps = 60/464 (12%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQ 187
           +L++  C  +   D A+ +   ++++ L    E  Y++L HAL   GR+E+ Y +FL+ +
Sbjct: 444 TLIQGQCKKHE-FDNAFRLFEMMEQNGLTPD-EQAYNVLTHALCKSGRAEEAY-SFLVRK 500

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
              LT +TY +L+   ++  + + A  L+ KM  +G   D   YS+++Q+L +  K++ +
Sbjct: 501 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEA 560

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           L          D++ L G   N V                               Y  +I
Sbjct: 561 LSI-------LDQMTLSGVKCNIV------------------------------AYTIII 583

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           + +   G+   A+++F E+  SG KP    Y   +  Y K+G +++AE ++ EMER GV 
Sbjct: 584 SEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVA 643

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY----------SRILAGYRD 417
           PD  TY++ I+   + G  + A   LK M  +  +PN + Y          S + A Y D
Sbjct: 644 PDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVD 703

Query: 418 -RGEWQ-----RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
             G W        +Q+L+ M   G+ P    Y+ +I  F K   L  A   FD M  + I
Sbjct: 704 TSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDI 763

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+   +  LI C      + +A     +M E G+ P   +Y+ +I  L ++  ++  K 
Sbjct: 764 SPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKS 823

Query: 532 LLGNMRA-QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           L  ++   +    N V +  L D   ++G  D   + L  + ++
Sbjct: 824 LFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENR 867



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 185/460 (40%), Gaps = 56/460 (12%)

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK-A 278
           R+ G+     +++ ++Q L R  +  ++  + +   + C     D +   D I    +  
Sbjct: 80  RRPGFRHTAASHAALLQLLAR-RRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVG 138

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD  KA   L M   +G      +Y  +I  L  +    EA  +   + + G       Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+KG  K G +  A  V+ EM   GV+P   TY+ +ID Y  +GR + A  +   ME 
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 399 SHAKPNSFIY----------------------------------SRILAGYRDRGEWQRT 424
           +   P+ + Y                                  + I+ GY         
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            +V   M SS  + D   Y V+I+   K      A      M + G+ P+ + + ++ID 
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + K G+   A E+F  M+  G  P   TY+ +I  L + ++      L+  M+  G+ P 
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 438

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           V+TYTTL+    +   FD+A              F +M  +GL P   A N L +A  + 
Sbjct: 439 VITYTTLIQGQCKKHEFDNAFR-----------LFEMMEQNGLTPDEQAYNVLTHALCKS 487

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            R  EA++   ++   G+    VTYT+L      VD F K
Sbjct: 488 GRAEEAYS---FLVRKGVVLTKVTYTSL------VDGFSK 518


>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 416

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 178/393 (45%), Gaps = 35/393 (8%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           VI    + G   +A++ L      GLSP   TY AV  A +   +   A A+ +E+   G
Sbjct: 36  VITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVG 95

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L P    Y++ +    K    K A  ++ EM   G+ PD  TYS  +DA A   +W+ A 
Sbjct: 96  LTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKEAL 155

Query: 391 IVLKEMEVSHAKPNSFIYSRI------------LAGYRDRGEWQRTFQVLKEMKSSGVEP 438
            +LKEM      PN   Y+ +            + G    G+W+ T  +LKEM + G+ P
Sbjct: 156 ALLKEMTAVGLTPNVISYNGLPSMSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTP 215

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-CH-------FKCGR 490
           +   YN  ID   K      A+A    M + G+ PD I++++ ID C        F C +
Sbjct: 216 NVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPCAK 275

Query: 491 ---YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
              +  A  L +EM   G  P   +Y+  I    + ++W+    LL  M A GL P+V+T
Sbjct: 276 GEQWKGALALLKEMTVVGLTPNVVSYSAAIA-CAKGDQWKVALALLKKMTAVGLTPDVIT 334

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
             + +D   + G+++ A+  L           + M   GL PS +  NS I+A     R 
Sbjct: 335 CNSAIDACSKGGQWETALALL-----------KEMAAVGLTPSVVGYNSAIDACARGGRW 383

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            E   +L+ M+E G+ PDV+TY  LM   +  D
Sbjct: 384 KEGVDLLEEMRELGVVPDVITYHALMVTCVNYD 416



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 176/388 (45%), Gaps = 26/388 (6%)

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
           R+ L   ++  +I+AC R    E+A+ L+ +M   G   + I Y+ V  +  +  +   +
Sbjct: 25  RELLHQKSHCMVITACGRGGQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQWKGA 84

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           L   L KE+    +  D    +  +   AK      A+  L     VGL+P   TY++ +
Sbjct: 85  L--ALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSAV 142

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL------------LKGYVKMGYLKDAE 355
            A +   +  EA A+ +E+   GL P   +YN L            + G  K G  K+  
Sbjct: 143 DACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSMSPWCTYNSAIDGCSKGGQWKETL 202

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++ EM   G+ P+  TY+  IDA +  G+W+ A  +LKEM      P+   YS  +   
Sbjct: 203 ALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDAC 262

Query: 416 RD----------RGE-WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
                       +GE W+    +LKEM   G+ P+   Y+  I    K +    A+A   
Sbjct: 263 SKGATAQLFPCAKGEQWKGALALLKEMTVVGLTPNVVSYSAAI-ACAKGDQWKVALALLK 321

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           +M + G+ PD IT N+ ID   K G+++ A  L +EM   G  P    YN  I+      
Sbjct: 322 KMTAVGLTPDVITCNSAIDACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGG 381

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           RW++   LL  MR  G++P+V+TY  L+
Sbjct: 382 RWKEGVDLLEEMRELGVVPDVITYHALM 409



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 39/403 (9%)

Query: 204 ARNDDLEKALNLMSKMRQ-------DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +R  D  KAL  +  M++          HC      +VI +  R  + + ++  KL +E+
Sbjct: 5   SRGGDRRKALRALDGMKRLPRELLHQKSHC------MVITACGRGGQWEQAV--KLLREM 56

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
               +  +    N V    AK      A+  L     VGL+P   TY++ + A +   + 
Sbjct: 57  PTAGLSPNVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQW 116

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A A+ +E+   GL P    Y++ +    K    K+A  ++ EM   G+ P+  +Y+ L
Sbjct: 117 KGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGL 176

Query: 377 ------------IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
                       ID  +  G+W+    +LKEM      PN   Y+  +      G+W+  
Sbjct: 177 PSMSPWCTYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEA 236

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGK------YNC-----LHHAMAAFDRMLSEGIEP 473
             +LKEM + G+ PD   Y+  ID   K      + C        A+A    M   G+ P
Sbjct: 237 LALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEMTVVGLTP 296

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + ++++  I C  K  ++  A  L ++M   G  P   T N  I+   +  +WE    LL
Sbjct: 297 NVVSYSAAIACA-KGDQWKVALALLKKMTAVGLTPDVITCNSAIDACSKGGQWETALALL 355

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
             M A GL P+VV Y + +D   + GR+ + ++ LE + +  V
Sbjct: 356 KEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGV 398



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 13/257 (5%)

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           E+ H K +  + +    G    G+W++  ++L+EM ++G+ P+   YN +     K    
Sbjct: 26  ELLHQKSHCMVITACGRG----GQWEQAVKLLREMPTAGLSPNVITYNAVFAACAKGEQW 81

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+A    M + G+ PD IT+++ +D   K  ++  A  L +EM   G  P   TY+  
Sbjct: 82  KGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALALLKEMTAVGLTPDVITYSSA 141

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-CLEGLS-DQ 574
           ++   + E+W++   LL  M A GL PNV++Y  L  +      ++ AI+ C +G    +
Sbjct: 142 VDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSMSPWC-TYNSAIDGCSKGGQWKE 200

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
            +   + M   GL P+ +  NS I+A  +  +  EA A+L+ M   GL PDV++Y++   
Sbjct: 201 TLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLKEMTAVGLTPDVISYSS--- 257

Query: 635 ALIRVDKFHKVFSSYLF 651
               +D   K  ++ LF
Sbjct: 258 ---AIDACSKGATAQLF 271



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 37/249 (14%)

Query: 120 SYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL----------LYSIL 169
           SY  +P+      +   C+ NS+ID       W  K  L    E+           Y+  
Sbjct: 172 SYNGLPS------MSPWCTYNSAIDGCSKGGQW--KETLALLKEMAAVGLTPNVITYNSA 223

Query: 170 IHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISAC-----------ARNDDLEKAL 213
           I A  +  +  EA  L +      LTP  ++Y++ I AC           A+ +  + AL
Sbjct: 224 IDACSKGGQWKEALALLKEMTAVGLTPDVISYSSAIDACSKGATAQLFPCAKGEQWKGAL 283

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+ +M   G   + ++YS  I +  + ++   +L   L K++    +  D    N  I 
Sbjct: 284 ALLKEMTVVGLTPNVVSYSAAI-ACAKGDQWKVAL--ALLKKMTAVGLTPDVITCNSAID 340

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
             +K G    A+  L     VGL+P    Y + I A +  GR  E   + EE++E G+ P
Sbjct: 341 ACSKGGQWETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVP 400

Query: 334 RTKAYNALL 342
               Y+AL+
Sbjct: 401 DVITYHALM 409


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 227/527 (43%), Gaps = 61/527 (11%)

Query: 147  YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTPLT--YNALIS 201
            + ++  + ++ +C       S ++  LG ++ + +A   F   + ++  P+   YN++I 
Sbjct: 1133 WKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMII 1192

Query: 202  ACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
                    EK   L ++M  +G HC  D + YS +I +  +  + DS++           
Sbjct: 1193 MLMHEGQYEKVHQLYNEMSTEG-HCFPDTVTYSALISAFCKLGRRDSAI----------- 1240

Query: 260  KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
                  QLLN++                    + +G+ P T  Y  +I           A
Sbjct: 1241 ------QLLNEM--------------------KEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 320  EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             ++FEE++    +P    Y  L++G  K G + +A     EM+R G  PD    + +I+ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 380  YANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEP 438
               AGR + A  + +EME     P+   Y+ I+ A +  +          + MK SG+ P
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 439  DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
             +  Y+++ID F K N +  AM   + M  +G  P    + +LID   K  RYD A ELF
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 499  EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            +E++E         Y +MI  LG+  R +D   +   M   G  P+V  Y  L+    ++
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 1514

Query: 559  GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
            G  D+A+           +  R M+  G  P   + N ++N   +      A  +L  MK
Sbjct: 1515 GMLDEAL-----------STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563

Query: 619  ENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI----YKMLSYS 661
            ++ ++PDVV+Y T++ AL     F +        N     Y +++YS
Sbjct: 1564 QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYS 1610



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 8/405 (1%)

Query: 159  CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
            C+   + YS LI A   LGR +   +     +   + P T  Y  LI+   + +D   AL
Sbjct: 1216 CFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGAL 1275

Query: 214  NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            +L  +MR      D   Y+ +I+ L +  +ID +     + E++ +    D   +N++I 
Sbjct: 1276 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAY--HFFCEMQREGCRPDTVFMNNMIN 1333

Query: 274  GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESGLK 332
               KAG    AM+     + +   P   TY  +I AL  S  R  E  + FE +KESG+ 
Sbjct: 1334 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 1393

Query: 333  PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
            P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LIDA   A R++ A  +
Sbjct: 1394 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 1453

Query: 393  LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
             +E++ +    ++ +Y+ ++      G       +  EM   G  PD + YN ++    +
Sbjct: 1454 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 1513

Query: 453  YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
               L  A++   RM   G  PD  ++N +++   K G   RA E+   M++    P   +
Sbjct: 1514 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 1573

Query: 513  YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            YN ++  L     +E+  +L+  M   G   +++TY+++++  G+
Sbjct: 1574 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 23/249 (9%)

Query: 122  RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL--------------YS 167
            RA   P W   +K    S SS   +  +  + + + +  +  LL              Y 
Sbjct: 1376 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 1435

Query: 168  ILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQD 222
             LI ALG++++   A  L Q  +      +   Y  +I    +   L+ A+N+  +M + 
Sbjct: 1436 SLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL 1495

Query: 223  GYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D   Y+ ++  L RT  +D +L   +  +E  C     D    N ++ G AK G  
Sbjct: 1496 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP---DINSYNIILNGLAKTGGP 1552

Query: 282  SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             +AM  L   +   + P   +Y  V+ ALS++G   EA  + +E+   G +     Y+++
Sbjct: 1553 HRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSI 1612

Query: 342  LKGYVKMGY 350
            L+   K+ +
Sbjct: 1613 LEAIGKVDH 1621


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 214/463 (46%), Gaps = 16/463 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N +I    +  +L +A +L S+M++ G   D + ++ +I    +  ++D   +++L +
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE--VEQLVE 247

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+     + D    N +I  F K G    A  +    +  G+     T++  + A    G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              EA  +F +++  G+      Y  L+ G  K G L DA  ++ EM R GV  +  TY+
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYT 367

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D      +   A  VL+ ME +  + N  +Y+ ++ G+      ++   +L EMK+ 
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E D   Y  +I      + L  A +   +M   G+EP+ I + T++D  FK G+   A
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + +++ + G+ P   TY  +I+ L +    ++       MR  GL PNV  YT LVD 
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++G       CL    ++AV  F  M   G+    +   +L++ + +     +AFA+ 
Sbjct: 548 LCKNG-------CL----NEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 596

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKF---HKVFSSYLFFNI 654
             M ++GL+ D+  YT  +     ++      +VFS  +   I
Sbjct: 597 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 639



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 167/410 (40%), Gaps = 59/410 (14%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   T+  VI  L   G   EA ++F  +KE G  P    +N+L+ GY K G L + E 
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESA--------------------------- 389
           +V EM RSG   D  TY+ LI+ +   GR E+A                           
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 390 -----RIVLK---EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                R  +K   +M V     N F Y+ ++ G    G       +L EM   GV  +  
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y V++D   K   +  A      M   G+  + + + TLI  HF     ++A  L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           + +G     + Y  +I  L    + ++ K LL  M   GL PN + YTT++D   +SG+ 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +AI                         C  G  D+A++ F  MR  GL P+  A  +L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           ++   ++    EA  +   M   G+  D V YT L+   ++    H  F+
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 185/412 (44%), Gaps = 7/412 (1%)

Query: 159 CYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C +  + Y+ LI+     GR E  Y  F   +R+ +    +T++  + A  +   + +A+
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L ++MR  G   +   Y+ +I    +  ++D +++  L  E+    + L+      ++ 
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIV--LLDEMVRQGVPLNVVTYTVLVD 371

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  K    ++A   L M +  G+      Y  +I     +  + +A  +  E+K  GL+ 
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y AL++G   +  L +A+ ++++M+ SG+ P+   Y+ ++DA   +G+   A  +L
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +++  S  +PN   Y  ++ G    G          +M+  G++P+   Y  ++D   K 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
            CL+ A+  F+ M+ +G+  D + +  L+D + K G    A  L  +M + G       Y
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCY 611

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
              I+         + + +   M   G+ P+   Y  L+  Y + G  ++AI
Sbjct: 612 TCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 152/353 (43%), Gaps = 8/353 (2%)

Query: 163 ELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E  Y+ LI    ++ +L +A +L      Q   L  +TY  L+    +   + +A +++ 
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M + G   + + Y+ +I         + +L   L  E++   +ELD  L   +I G   
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMNKNSEKAL--GLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A   L      GL P    Y  ++ A   SG+  EA A+ +++ +SG +P    
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y AL+ G  K G + +A    ++M   G+ P+   Y+ L+D     G    A  +  EM 
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 +  +Y+ +L GY  +G     F +  +M  SG++ D   Y   I  F   N + 
Sbjct: 566 HKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMP 625

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            A   F  M+  GI PD   +N LI  + K G  + A  L +EM ER    CT
Sbjct: 626 EAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM-ERVLPSCT 677



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 28/256 (10%)

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +   +L+   DRG      + +  ++   V P+T   N ++    +      +     R+
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRL 179

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +   P+  T+N +ID   K G    A  LF  M+E G  P   T+N +I+  G+    
Sbjct: 180 FEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
           ++V++L+  MR  G   +VVTY  L++ + + GR + A                      
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EGL  +A+  F  MR  G+  +      LI+   +  R  +A  +L  M   G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 623 KPDVVTYTTLMKALIR 638
             +VVTYT L+  L +
Sbjct: 360 PLNVVTYTVLVDGLCK 375


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 211/445 (47%), Gaps = 14/445 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +A+I+A  ++  LE++L+    M   G+     +++  +  L ++  +D +     + E 
Sbjct: 42  DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTW--GFFTEY 99

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
              + + D       I  F + G+ SK    L   + +G+SP    Y  +I A   +G  
Sbjct: 100 -LGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDI 158

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A+ +F  + + GL      Y  ++ G+ K GY KD   +  +M+  GVLP+ +TY+ L
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  Y   G+   A  V  E+       N+  Y+ ++ G   +G+  +   +L+ MK + +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            P T  +N+++D       L  A++  +++   G+ P  +T+N LI    K G      E
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L  EM++RG  P   TY I++N     +  E    +   M+  GL+P+  TY  L  I+G
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVL--IHG 396

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C++G   +A   ++ M    L+P+++  N++IN + ++    +A   L+ 
Sbjct: 397 L---------CIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEE 447

Query: 617 MKENGLKPDVVTYTTLMKALIRVDK 641
           M +NG+ P+V +Y + ++ L +  K
Sbjct: 448 MVKNGVTPNVASYISTIQILCKDGK 472



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 179/384 (46%), Gaps = 9/384 (2%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL--TP--LTYNALISACARNDDLEKALNLMSKMR 220
           + I I A   +  + + F LL+Q + +  +P    Y  LI AC RN D+++A  + S+M 
Sbjct: 110 FGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y+++I    +          +LY++++   +  +    N +I  + + G 
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGF--ELYQKMKLVGVLPNLYTYNSLITEYCRDGK 227

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A +        G++    TY  +I  L   G+  +AE + E +K + + P T+ +N 
Sbjct: 228 LSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNM 287

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G    G L  A   + +++  G+ P   TY++LI  ++  G       +++EME   
Sbjct: 288 LMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ ++  +    + ++ +++   MK  G+ PD H Y V+I        +  A 
Sbjct: 348 ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEAS 407

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFK-CGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             +  M+   ++P+ + +NT+I+ + K C  Y +A +  EEM + G  P   +Y   I +
Sbjct: 408 KLYKSMVEMHLQPNDVIYNTMINGYCKECNSY-KALKFLEEMVKNGVTPNVASYISTIQI 466

Query: 520 LGEQERWEDVKRLLGNMRAQGLLP 543
           L +  +  + KRLL  M   GL P
Sbjct: 467 LCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 9/288 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++SL+   C  +  + LA+ V   + K  +  +  + Y+ILI  L R  ++ +A  L +R
Sbjct: 215 YNSLITEYCR-DGKLSLAFKVFDEISKRGVACN-AVTYNILIGGLCRKGQVSKAEGLLER 272

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +      T  T+N L+        L+KAL+ + K++  G     + Y+++I   ++   
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG- 331

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +SS++ +L +E+E   I         ++  F ++ D  KA     + + +GL P   TY
Sbjct: 332 -NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTY 390

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G  +EA  +++ + E  L+P    YN ++ GY K      A   + EM +
Sbjct: 391 GVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           +GV P+  +Y   I      G+   A+ +LKEM  +  KP   + S++
Sbjct: 451 NGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKV 498



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 77/194 (39%), Gaps = 12/194 (6%)

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  ++ +F  M+ +G  P + ++N  +D   K G  DR    F E   R  F    ++ I
Sbjct: 54  LEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFD-VYSFGI 112

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            I    E         LL  M   G+ PNV  YT L++             C  G  DQA
Sbjct: 113 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC-----------CRNGDIDQA 161

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M   GL  +      +IN F +     + F + Q MK  G+ P++ TY +L+  
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221

Query: 636 LIRVDKFHKVFSSY 649
             R  K    F  +
Sbjct: 222 YCRDGKLSLAFKVF 235


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 18/414 (4%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
           F  Y L++++L +    DS+  + ++  +  D I  D  +L  ++  +A+ G    A  F
Sbjct: 109 FNTYDLLMRNLCKVGLNDSA--KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L      G+      Y  ++  L       EA  +F E  E    P   ++N L++G  +
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE-MEVSHAKPNSF 406
           +G +  A      M   G  PD  +Y+ LI+ +           +LKE M +    P+  
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ I++GY   G+ +   ++  EM SSG++P+   +NV+ID FGK   +  AM  +++M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L  G  PD +T+ +LID + + G  ++  +L+EEM+ R   P   TY ++IN L ++ R 
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV--MRT 584
            + +  L ++++  ++P    Y  ++D + ++G+ D+A              F V  M+ 
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA-------------NFIVAEMQE 453

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +P  +    LI       R  EA +    M E    PD +T  +L+  L++
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 14/342 (4%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L   G    A+ VF+ ++  G+ P +     L+  Y +MG L  A+  ++E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+      Y+ L++        + A ++ +E    +  P+ + ++ ++ G    GE 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH--HAMAAFDRMLSEGIEPDTITWN 479
            + F+  + M + G  PD   YN +I+ F + N +   H +   D ML +G+ PD IT+ 
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED-MLIKGVSPDVITYT 289

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I  + K G    A ELF+EM   G  P   T+N++I+  G+         +   M   
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G LP+VVT+T+L+D Y           C EG  +Q +  +  M+   L P+      LIN
Sbjct: 350 GCLPDVVTFTSLIDGY-----------CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A  ++ R  EA   L+++K + + P    Y  ++    +  K
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 169/404 (41%), Gaps = 34/404 (8%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS------- 247
           TY+ L+    +    + A  +   MR DG   D     L++ S  R  K+DS+       
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 248 --------------LLQKLYKEIECDKIEL------------DGQLLNDVIVGFAKAGDA 281
                         LL  L K+   D+  L            D    N +I G  + G+ 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF-EELKESGLKPRTKAYNA 340
            KA  F       G  P   +Y  +I          +   +  E++   G+ P    Y +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K+G +K A  +  EM  SG+ P++ T+++LID +   G   SA ++ ++M +  
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++ GY   GE  +  ++ +EMK   + P+ + Y V+I+   K N +  A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                + S  + P    +N +ID   K G+ D A  +  EMQE+   P   T+ I+I   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             + R  +       M     +P+ +T  +L+    ++G  ++A
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 21/353 (5%)

Query: 159 CYSYEL---LYSILIHALGRSEKLYEAFLLSQRQRLTPL------TYNALISACARNDDL 209
           CY  ++   +Y+ L++ L +   + EA LL  R+ L P       ++N LI    R  ++
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF-REHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLL 268
           +KA      M   G   D ++Y+ +I    R N+I       L KE +    +  D    
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG--HDLLKEDMLIKGVSPDVITY 288

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G+ K GD   A          G+ P   T+  +I      G    A  ++E++  
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P    + +L+ GY + G +     +  EM+   + P+ +TY++LI+A     R   
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           AR  L+ ++ S   P  FIY+ ++ G+   G+      ++ EM+     PD   + ++I 
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILII 468

Query: 449 TFGKYNCLH----HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                NC+      A++ F +M+     PD IT N+LI C  K G  + A ++
Sbjct: 469 G----NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ L+    K G  D A+ +F+ M+  G  P ++   ++++      + +  K  L  +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
              G+  +   Y  L+++  +           + L D+AV  FR        P   + N 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVK-----------QNLVDEAVLLFREHLEPYFVPDVYSFNI 219

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           LI          +AF   Q M   G  PD+V+Y TL+    RV++  K
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY++++  L +    +  K +   MR+ G+LP+      LV  Y + G+ D        
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD-------- 161

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
               A N    +   G+K S    N+L+N   +     EA  + +   E    PDV ++ 
Sbjct: 162 ---SAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFN 218

Query: 631 TLMKALIRVDKFHKVFSSY 649
            L++ L R+ +  K F  +
Sbjct: 219 ILIRGLCRIGEIDKAFEFF 237


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 19/477 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E+ Y+ILIHAL +   + +A  L  + R     +T   YN+LI+   +   L++A  L+S
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M ++G      +YS +I  L R   + S +  +L++E+    I  +      +I GF K
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCM--ELHREMAERGIAWNNYTFTALINGFCK 490

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A R         + P   T+  +I      G   +A  +++++ E GLKP    
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G      +  A   V+++E S  + +  + + L+  +   GR+     +  EM 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V   K +   ++ I+     + + +++  + +EMK  GV+PD  FY  MID   K   + 
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +D+M+ +G  P+T+T   LI+   K G    AE L +EM      P   TYN  +
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +    +   E  K L   M  QG L ++V++  L+    ++G+  +AI+ +  +++    
Sbjct: 731 DYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES--- 786

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   G  P  ++ +++I+   +     +AF +   M   GLKPDVV Y   ++
Sbjct: 787 --------GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/510 (22%), Positives = 216/510 (42%), Gaps = 41/510 (8%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMS 217
           E +Y+  I A   S  L  A  L  R      + + + YN L+    +N  +++A+ + +
Sbjct: 198 EYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKN 257

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA- 276
            M   G   D + Y  ++    R  +++ +L       I  D I L G + ++    F  
Sbjct: 258 VMVNIGVTADEVTYRTLVYGFCRMEELEMAL------RITHDMIRL-GFVPSEANCSFMI 310

Query: 277 ----KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
               K     +A         +G+ P    Y A+I  L  + R  +A+ +F+E+   GL+
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    Y  L+    K G ++DA  +  +M   G+    + Y+ LI+ Y   G  + AR +
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L  M      P +  YS ++AG    G+     ++ +EM   G+  + + +  +I+ F K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A   FD+M+   + P+ +T+N +I+ +   G   +A +L+++M E G  P   T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y  +I+ L            + ++     + N  + T L+  + + GRF +     + ++
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 573 DQAVN------------------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            + V                          FR M+  G+KP ++    +I+A  +++   
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +A      M  +G  P+ VT+T L+  L +
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCK 700



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 24/386 (6%)

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG++   G++    T + ++ +L    +   A  +F+++ +SG+      Y A ++ Y +
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L  A  +V  ME  GV      Y++L+       R + A  V   M       +   
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++ G+    E +   ++  +M   G  P     + MID   K   +  A +   ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ P+   +N LID   K  R+D A+ LF+EM  RG  P   TY I+I+ L ++   E
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------- 578
           D   L   MR +G+   V  Y +L++ Y + G  D A   L G+  + +           
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 579 ---------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                           R M   G+  +N    +LIN F +D++  EA  +   M ++ + 
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P+ VT+  +++    V    K F  Y
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLY 536



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/462 (20%), Positives = 187/462 (40%), Gaps = 48/462 (10%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A +L  KM Q G H D   Y+  I++   +  +D +  + L   +E + ++      N +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA--RGLVVRMESEGVKASAVPYNVL 239

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G  K     +A+    +   +G++    TY  ++           A  +  ++   G 
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P     + ++    K   +++A  +  ++   G++P+   Y+ LID      R++ A  
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + KEM     +PN   Y+ ++     RG  +    +  +M+  G++   + YN +I+ + 
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A      M+ EG+ P   +++ LI    + G      EL  EM ERG      
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+  +IN   + ++ ++  RL   M    ++PN VT+  +++ Y           CL G 
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-----------CLVGN 528

Query: 572 SDQAVNAFRVMRTDGLKP-----------------------------------SNLALNS 596
             +A   +  M   GLKP                                   +N +L +
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           L+  F  + R  E + +   M   G+K D+V++T ++ A ++
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 13/405 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++ SL +  +   +L + L+ ++    + LD  +    I  + ++ +   A   +   
Sbjct: 167 SQILFSLVKIRQF--ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+      Y  ++  L  + R  EA  V   +   G+      Y  L+ G+ +M  L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  +  +M R G +P E   S +ID        E A  +  ++      PN F Y+ +
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +        +    ++ KEM   G+EP+   Y ++I    K   +  A+  FD+M  +GI
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +     +N+LI+ + K G  DRA  L   M + G  P   +Y+ +I  L           
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +G+  N  T+T L++ + +  + D+A    + + D  V            P+ 
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV-----------IPNE 513

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N +I  +       +AF +   M E GLKPD  TY +L+  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 170/395 (43%), Gaps = 14/395 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI+   + +K+ EA  L  +     + P  +T+N +I       ++ KA  L  +M 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y  +I  L  T+ +  +   +   ++E     L+   L  ++ GF + G 
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKA--NEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++           G+     ++  ++ A        ++  +F E+KE G+KP    Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K   +  A     +M   G  P+  T+++LI+    +G   SA ++ KEM   +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN F Y+  L  +   G+ ++   +   M    +     F N++I    K   +  A+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAI 777

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
               ++   G  PD I+++T+I    K G  ++A EL+ EM  +G  P    YNI I   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           N+ GE ++      +  NM   G+ PN  TY  L+
Sbjct: 838 NVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 869



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+++A  +    EK    F   + Q + P  + Y  +I A ++ +++ +ALN   +M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DGY  + + ++++I +L ++  + S+ L  L KE+    +  +    N  +  FA  GD
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAEL--LCKEMLAGNVLPNKFTYNCFLDYFATEGD 738

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA + L  A   G      ++  +I  L  +G+  EA  +  ++ ESG  P   +Y+ 
Sbjct: 739 MEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    KMG +  A  + +EM   G+ PD   Y++ I      G  + A  +   M  S 
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857

Query: 401 AKPNSFIYSRILAG 414
            +PN   Y  +L+G
Sbjct: 858 VQPNWDTYRALLSG 871


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 39/513 (7%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARN 206
           WL +          Y+  + AL ++   +  YE F   QR+   P   TY+ ++    + 
Sbjct: 27  WLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKA 86

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL-DG 265
            +L+KA  L+ ++R+ G   + I YS+VI    + +++D +L  +++K +      + D 
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL--EIFKTMSSGGGCVPDV 144

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              N ++ G       S+A          G  P   +Y+ ++  L  +GR  EA  ++EE
Sbjct: 145 VTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E    P   AY + + G  K   + +A     +M   G   D   +S +I      G 
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 386 WESAR-----------------IVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTF 425
            E A+                    +EM   +  P++ +++ ++      +   +    F
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q +K MK     P+   YN+M+D   K   L  A    + M + G+ PD +T++ L+D  
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ DRA +L EEM + G FP + T   ++N L +  + +     L  M+A+G  P++
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY TL+D   ++GR D+AI  L             M      P   +   +I A     
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAK-----------MVAAKCTPDVFSYTIIITALCRSG 493

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + A A A+ Q M + G+ PD V Y +L+  L R
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 222/493 (45%), Gaps = 39/493 (7%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSK 218
           Y ++  +L H LG+   +   F    RQ+    +  TYN  + A A+ +  + A     +
Sbjct: 5   YTVVGEVLRH-LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQ 63

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++ GY  D   YS+V++ L +  ++D +  ++L  ++    ++L+    + VI G  KA
Sbjct: 64  MQRRGYPPDDFTYSIVLRGLCKAGELDKA--KELLGQLRESGVKLNVITYSVVIDGCCKA 121

Query: 279 GDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                A+  F  M+ G G  P   T+ +++  L +  R  EA  +FE + ++G +P   +
Sbjct: 122 SRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ LL G  K G L +A  +  EM     +PD   Y+  +     A R   A    ++M 
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
              +K ++  +S ++     +G  +                     N MI+   +   L 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEA------------------QNQMIEHLCRSGMLD 283

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT---TYN 514
            A   F+ M+S    P    +NTLI    K  R      LF+ M+    F C     TYN
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYN 343

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           IM++ L + ++ ++ + L+  M   GL P+VVTY+ LVD   + G+ D A + LE +S +
Sbjct: 344 IMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE 403

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                      G+ P +    S++NA  +  +   A + L+ MK  G  PD+VTY TL+ 
Sbjct: 404 -----------GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 635 ALIRVDKFHKVFS 647
            L +  +  +  +
Sbjct: 453 GLCKAGRIDEAIT 465



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 208/478 (43%), Gaps = 32/478 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++SLLK LCS    +  A+ +  ++ K   C    + YS L+  L ++ +L EA  L + 
Sbjct: 147 FNSLLKGLCSGER-MSEAFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI-------- 235
              +   P  + Y + ++   + + + +A +   KM   G   D + +S VI        
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 236 ---------QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
                    + L R+  +D +   K ++E+         +L N +I    K+      + 
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEAC--KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 287 FLGMAQGVG---LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
                + +      P   TY  ++  L  + +  EA+ +  E+   GL P    Y+AL+ 
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K+G L  A  ++ EM + GV PD  T + +++A + AG+ + A   L+ M+   + P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ +L G    G        L +M ++   PD   Y ++I    +      A A F
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+  G+ PDT+ +++L+D   + G  D A EL +    +  F     + ++++ L + 
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDF---VMHKMVLDGLCKA 559

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            + ED   ++  M   G   +  TY ++V    + G+ D A + ++  S+   +  R+
Sbjct: 560 GKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERL 617



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 129/323 (39%), Gaps = 73/323 (22%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR-----LTPL---TYNALISACARNDDLEKALNLM 216
           L++ LIHA+ +S++L +  LL QR +       P    TYN ++    +   L++A  L+
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLN----- 269
           ++M   G   D + YS ++  L +  K+D +  LL+++ KE        D  +LN     
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 270 --------------------DVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                               D++       G  KAG   +A+ FL        +P   +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY------------------ 345
             +ITAL  SG+   A A+F+E+ + G+ P T  Y++LL G                   
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLC 542

Query: 346 --------------VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
                          K G  +DA  VV  M  +G   D  TY  ++      G+ + AR 
Sbjct: 543 KPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQ 602

Query: 392 VLKEMEVSHAKPNSFIYSRILAG 414
           ++ +   +H         +  AG
Sbjct: 603 LVDDASETHTSVERLSMEKAEAG 625


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 193/414 (46%), Gaps = 18/414 (4%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
           F  Y L++++L +    DS+  + ++  +  D I  D  +L  ++  +A+ G    A  F
Sbjct: 109 FNTYDLLMRNLCKVGLNDSA--KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNF 166

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L      G+      Y  ++  L       EA  +F E  E    P   ++N L++G  +
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE-MEVSHAKPNSF 406
           +G +  A      M   G  PD  +Y+ LI+ +           +LKE M +    P+  
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVI 286

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ I++GY   G+ +   ++  EM SSG++P+   +NV+ID FGK   +  AM  +++M
Sbjct: 287 TYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           L  G  PD +T+ +LID + + G  ++  +L+EEM+ R   P   TY ++IN L ++ R 
Sbjct: 347 LLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRI 406

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV--MRT 584
            + +  L ++++  ++P    Y  ++D + ++G+ D+A              F V  M+ 
Sbjct: 407 REARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEA-------------NFIVAEMQE 453

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              +P  +    LI       R  EA +    M E    PD +T  +L+  L++
Sbjct: 454 KKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLK 507



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 14/342 (4%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  ++  L   G    A+ VF+ ++  G+ P +     L+  Y +MG L  A+  ++E+
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+      Y+ L++        + A ++ +E    +  P+ + ++ ++ G    GE 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH--HAMAAFDRMLSEGIEPDTITWN 479
            + F+  + M + G  PD   YN +I+ F + N +   H +   D ML +G+ PD IT+ 
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKED-MLIKGVSPDVITYT 289

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I  + K G    A ELF+EM   G  P   T+N++I+  G+         +   M   
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           G LP+VVT+T+L+D Y           C EG  +Q +  +  M+   L P+      LIN
Sbjct: 350 GCLPDVVTFTSLIDGY-----------CREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A  ++ R  EA   L+++K + + P    Y  ++    +  K
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGK 440



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 169/404 (41%), Gaps = 34/404 (8%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS------- 247
           TY+ L+    +    + A  +   MR DG   D     L++ S  R  K+DS+       
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 248 --------------LLQKLYKEIECDKIEL------------DGQLLNDVIVGFAKAGDA 281
                         LL  L K+   D+  L            D    N +I G  + G+ 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF-EELKESGLKPRTKAYNA 340
            KA  F       G  P   +Y  +I          +   +  E++   G+ P    Y +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K+G +K A  +  EM  SG+ P++ T+++LID +   G   SA ++ ++M +  
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++ GY   GE  +  ++ +EMK   + P+ + Y V+I+   K N +  A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                + S  + P    +N +ID   K G+ D A  +  EMQE+   P   T+ I+I   
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGN 470

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             + R  +       M     +P+ +T  +L+    ++G  ++A
Sbjct: 471 CMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEA 514



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 21/353 (5%)

Query: 159 CYSYEL---LYSILIHALGRSEKLYEAFLLSQRQRLTPL------TYNALISACARNDDL 209
           CY  ++   +Y+ L++ L +   + EA LL  R+ L P       ++N LI    R  ++
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLF-REHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE-IECDKIELDGQLL 268
           +KA      M   G   D ++Y+ +I    R N+I       L KE +    +  D    
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKG--HDLLKEDMLIKGVSPDVITY 288

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G+ K GD   A          G+ P   T+  +I      G    A  ++E++  
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G  P    + +L+ GY + G +     +  EM+   + P+ +TY++LI+A     R   
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           AR  L+ ++ S   P  FIY+ ++ G+   G+      ++ EM+     PD   + ++I 
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILII 468

Query: 449 TFGKYNCLH----HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                NC+      A++ F +M+     PD IT N+LI C  K G  + A ++
Sbjct: 469 G----NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ L+    K G  D A+ +F+ M+  G  P ++   ++++      + +  K  L  +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
              G+  +   Y  L+++  +           + L D+AV  FR        P   + N 
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVK-----------QNLVDEAVLLFREHLEPYFVPDVYSFNI 219

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           LI          +AF   Q M   G  PD+V+Y TL+    RV++  K
Sbjct: 220 LIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISK 267



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY++++  L +    +  K +   MR+ G+LP+      LV  Y + G+ D        
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD-------- 161

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
               A N    +   G+K S    N+L+N   +     EA  + +   E    PDV ++ 
Sbjct: 162 ---SAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFN 218

Query: 631 TLMKALIRVDKFHKVFSSY 649
            L++ L R+ +  K F  +
Sbjct: 219 ILIRGLCRIGEIDKAFEFF 237


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 213/467 (45%), Gaps = 29/467 (6%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY AL+        + +A+ +   MR D    D   Y+ ++  L    +  +   + 
Sbjct: 141 TAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR--TEEAEV 198

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +E   +  E +  + N +I G+  AG+   A++      G   SP   TY  +I  L 
Sbjct: 199 LLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLC 258

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG+   A  +F  + E+GL+P    Y AL++G    G+L+ A  ++  ME +G++P++ 
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S+LIDA     + E A++ L  +     K N  +Y+ ++ G    G+     +++++M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G  PD H Y+ +ID   +   L  A    + M+ +GI+   +T+  +ID   +    
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +  +++F++M   G  P   TY + +    E+ R ED + ++  M  +G+ PN+VTY TL
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE-------- 603
           +  Y              GL  QA + F VM   G KP+  +   L+    +        
Sbjct: 499 IRGYANL-----------GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547

Query: 604 ------DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                 D +D +    L+ + E  L      Y+  ++ L RVD+  +
Sbjct: 548 DIWKIADMKDLQVL--LEDITERQLPLAADIYSCFIRCLCRVDRLEE 592



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 190/378 (50%), Gaps = 15/378 (3%)

Query: 274 GFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           G   AG   +AM  F+GM +    +P T  YA ++  L  +GRT EAE + EE   +G +
Sbjct: 151 GLLGAGMVREAMTVFVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFE 209

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    YNAL+ GY   G ++ A  V   M+ +   P+  TY+ LI     +G+ E A ++
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
              M  +  +PN   Y+ ++ G  + G  Q  F++L  M+++G+ P+   ++V+ID   K
Sbjct: 270 FSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCK 329

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A      ++ +G++ + + + +LID   K G+ D A+EL ++M   G+ P   +
Sbjct: 330 REKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHS 389

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD-IYGQSGRFDDAIECLEGL 571
           Y+ +I+ L  Q++      +L +M  +G+  + VTYT ++D +  + G            
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG------------ 437

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S+     F  M   G+ P  +     + ++ E+ R  +A +++  M + G+ P++VTY T
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 632 LMKALIRVDKFHKVFSSY 649
           L++    +    + FS++
Sbjct: 498 LIRGYANLGLVSQAFSTF 515



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/399 (21%), Positives = 168/399 (42%), Gaps = 26/399 (6%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G  E   + F      R +P   TY  LI    ++  +E+A+ L S+M + G   + + Y
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND-----VIVGFAKAGDASKAMR 286
           + +IQ      + +   LQ  ++ +    +E +G + ND     +I    K     +A  
Sbjct: 286 TALIQ-----GQCNEGHLQCAFRLLH--LMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FLG     G+      Y ++I  L  +G+   A+ + +++   G  P   +Y++L+ G  
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           +   L  A  ++ +M   G+     TY+++ID        E  + +  +M  +   P+  
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+  +  Y + G  +    ++ +M   GV P+   YN +I  +     +  A + F+ M
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM 518

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRA------------EELFEEMQERGYFPCTTTYN 514
           + +G +P+  ++  L+    K    D +            + L E++ ER        Y+
Sbjct: 519 VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYS 578

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             I  L   +R E+ K     M+   L P+   YT+++D
Sbjct: 579 CFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 25/237 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS LI  L R +KL +A L+ +       + +P+TY  +I    R    E    +  KM 
Sbjct: 390 YSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMI 449

Query: 221 QDGYHCDFINYSLVIQSLT---RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             G + D + Y++ ++S     R    +S ++Q + + +  + +       N +I G+A 
Sbjct: 450 ATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTY-----NTLIRGYAN 504

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITAL---SNSGRTIEA---------EAVFEE 325
            G  S+A     +  G G  P   +Y  ++  +   S+S  +++          + + E+
Sbjct: 505 LGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLED 564

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           + E  L      Y+  ++   ++  L++A+     M+ + + P E  Y+ +ID  A+
Sbjct: 565 ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCAD 621


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 224/513 (43%), Gaps = 39/513 (7%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARN 206
           WL +          Y+  + AL ++   +  YE F   QR+   P   TY+ ++    + 
Sbjct: 27  WLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKA 86

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL-DG 265
            +L+KA  L+ ++R+ G   + I YS+VI    + +++D +L  +++K +      + D 
Sbjct: 87  GELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDAL--EIFKTMSAGGGCVPDV 144

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              N ++ G       S+A          G  P   +Y+ ++  L  +GR  EA  ++EE
Sbjct: 145 VTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           + E    P   AY + + G  K   + +A     +M   G   D   +S +I      G 
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 386 WESAR-----------------IVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTF 425
            E A+                    +EM   +  P++ +++ ++      +   +    F
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLF 324

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           Q +K MK     P+   YN+M+D   K   L  A    + M + G+ PD +T++ L+D  
Sbjct: 325 QRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGL 384

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K G+ DRA +L EEM + G FP + T   ++N L +  + +     L  M+A+G  P++
Sbjct: 385 CKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDL 444

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY TL+D   ++GR D+AI  L             M      P   +   +I A     
Sbjct: 445 VTYNTLLDGLCKAGRIDEAITFLAK-----------MVAAKCTPDVFSYTIIITALCRSG 493

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + A A A+ Q M + G+ PD V Y +L+  L R
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLAR 526



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 222/493 (45%), Gaps = 39/493 (7%)

Query: 162 YELLYSILIHALGRSEKLYEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSK 218
           Y ++  +L H LG+   +   F    RQ+    +  TYN  + A A+ +  + A     +
Sbjct: 5   YTVVGEVLRH-LGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQ 63

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++ GY  D   YS+V++ L +  ++D +  ++L  ++    ++L+    + VI G  KA
Sbjct: 64  MQRRGYPPDDFTYSIVLRGLCKAGELDKA--KELLGQLRESGVKLNVITYSVVIDGCCKA 121

Query: 279 GDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                A+  F  M+ G G  P   T+ +++  L +  R  EA  +FE + ++G +P   +
Sbjct: 122 SRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ LL G  K G L +A  +  EM     +PD   Y+  +     A R   A    ++M 
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
              +K ++  +S ++     +G  +                     N MI+   +   L 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEA------------------QNQMIEHLCRSGMLD 283

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT---TYN 514
            A   F+ M+S    P    +NTLI    K  R      LF+ M+    F C     TYN
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYN 343

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           IM++ L + ++ ++ + L+  M   GL P+VVTY+ LVD   + G+ D A + LE +S +
Sbjct: 344 IMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKE 403

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                      G+ P +    S++NA  +  +   A + L+ MK  G  PD+VTY TL+ 
Sbjct: 404 -----------GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 635 ALIRVDKFHKVFS 647
            L +  +  +  +
Sbjct: 453 GLCKAGRIDEAIT 465



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 207/478 (43%), Gaps = 32/478 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++SLLK LCS    +  A+ +  ++ K   C    + YS L+  L ++ +L EA  L + 
Sbjct: 147 FNSLLKGLCSGER-MSEAFVLFEYMAKAG-CEPNVISYSTLLDGLCKAGRLDEACRLWEE 204

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI-------- 235
              +   P  + Y + ++   + + + +A +   KM   G   D + +S VI        
Sbjct: 205 MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGH 264

Query: 236 ---------QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
                    + L R+  +D +   K ++E+         +L N +I    K+      + 
Sbjct: 265 AEEAQNQMIEHLCRSGMLDEAC--KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322

Query: 287 FLGMAQGVG---LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
                + +      P   TY  ++  L  + +  EA+ +  E+   GL P    Y+AL+ 
Sbjct: 323 LFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVD 382

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  K+G L  A  ++ EM + GV PD  T + +++A + AG+ + A   L+ M+   + P
Sbjct: 383 GLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ +L G    G        L +M ++   PD   Y ++I    +      A A F
Sbjct: 443 DLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIF 502

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M+  G+ PDT+ +++L+D   + G  D A EL +    +  F     + ++++ L + 
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDF---VMHKMVVDGLCKA 559

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            + ED   ++  M   G   +  TY  +V    + G+ D A + ++  S+   +  R+
Sbjct: 560 GKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERL 617



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 144/358 (40%), Gaps = 75/358 (20%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ 189
           + ++++LC S   +D A      +   N   S EL ++ LIHA+ +S++L +  LL QR 
Sbjct: 270 NQMIEHLCRSGM-LDEACKTFEEMISRNHPPSAEL-FNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 190 R-----LTPL---TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +       P    TYN ++    +   L++A  L+++M   G   D + YS ++  L + 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 242 NKIDSS--LLQKLYKEIECDKIELDGQLLN-------------------------DVIV- 273
            K+D +  LL+++ KE        D  +LN                         D++  
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 274 -----GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
                G  KAG   +A+ FL        +P   +Y  +ITAL  SG+   A A+F+E+ +
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 329 SGLKPRTKAYNALLKGY--------------------------------VKMGYLKDAEF 356
            G+ P T  Y++LL G                                  K G  +DA  
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACE 567

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           VV  M  +G   D  TY  ++      G+ + AR ++ +   +H         +  AG
Sbjct: 568 VVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLSMEKAEAG 625


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 208/454 (45%), Gaps = 21/454 (4%)

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           +TP  +T + LI+       +  A +++  + + GY  + I  + +++ L    ++  +L
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             + +  +      LD      +I G  K G   +A   L   +G  + P    Y  ++ 
Sbjct: 169 --EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD 226

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L   G   EA  ++ ++   G+ P    Y  L+ G+  +G  ++   ++ +M    V  
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTF 425
           + +TY++LIDA    G    A  +   M     +P+   ++ +++GY    D  E ++ F
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
               E    G+ PD   YN++I  + K N +  A++ F++M  + + P+ +T+++LID  
Sbjct: 347 DTFAE---CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K GR   A ELF  + + G  P   TYNIM++ L + +  +    L   M  +GL PNV
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
            +Y  L++ Y +S R D           +A+N F  M    L P ++  N LI+   +  
Sbjct: 464 SSYNILINGYCKSKRID-----------EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           R + A+ +   M + G   DV+TY  L  A  ++
Sbjct: 513 RISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 189/445 (42%), Gaps = 17/445 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +N ++ +  +      A++L  +M   G     +  S++I        +    S+L  + 
Sbjct: 81  FNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVL 140

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       +L+   L  ++ G    G+  KA+ F       G      TY  +I  L   
Sbjct: 141 KR----GYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKI 196

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G T EA  +  +++   ++P    YN ++ G  K G + +A  + S++   G+ PD  TY
Sbjct: 197 GLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTY 256

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  +   G+W     +L +M   +   N + Y+ ++     +G   +   +   M  
Sbjct: 257 TCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE 316

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  PD   +N ++  +  YN +  A   FD     GI PD  ++N LI  + K  R D 
Sbjct: 317 RGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDE 376

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF +M  +   P   TY+ +I+ L +  R      L   +   G  PNV+TY  ++D
Sbjct: 377 ALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLD 436

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                        C   L D+A+  F +M   GL P+  + N LIN + + +R  EA  +
Sbjct: 437 AL-----------CKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNL 485

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            + M    L PD VTY  L+  L +
Sbjct: 486 FEEMHRRNLVPDSVTYNCLIDGLCK 510



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 210/506 (41%), Gaps = 11/506 (2%)

Query: 58  TSKQNDTEEEEEDD-DDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFK 116
           + KQN  ++   D  DD ++L  +     PL + +  N    S   +   P++   +   
Sbjct: 45  SQKQNAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTA---ISLS 101

Query: 117 LAESYRAV-PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH----NLCYSYELLYSILIH 171
                R + P+ +  S+L N       +  A++V+  + K     N      ++  + I+
Sbjct: 102 KQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCIN 161

Query: 172 ALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
              R    +   +++Q   L  +TY  LI+   +     +A  L+ KM       + + Y
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           ++++  L +   +  +  + LY ++    I+ D      +I GF   G   +  R L   
Sbjct: 222 NMIVDGLCKDGLVTEA--RDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 279

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
               ++    TY  +I AL   G   +A  +   + E G +P    +N L+ GY     +
Sbjct: 280 VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV 339

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  +       G+ PD  +Y++LI  Y    R + A  +  +M      PN   YS +
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSL 399

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G    G     +++   +   G  P+   YN+M+D   K   +  A+  F+ M   G+
Sbjct: 400 IDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGL 459

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+  ++N LI+ + K  R D A  LFEEM  R   P + TYN +I+ L +  R      
Sbjct: 460 TPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWE 519

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           L   M   G   +V+TY  L D + +
Sbjct: 520 LFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 24/345 (6%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A A+F  L      P    +N +L   VKM +   A  +  +M   G+ P   T S+LI
Sbjct: 61  DAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILI 120

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + Y + G    A  VL  +     + N+   + I+ G    GE ++  +    + + G  
Sbjct: 121 NCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFL 180

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D   Y  +I+   K      A     +M  + + P+ + +N ++D   K G    A +L
Sbjct: 181 LDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDL 240

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           + ++  RG  P   TY  +I+      +W +V RLL +M  + +  NV TY  L+D   +
Sbjct: 241 YSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCK 300

Query: 558 SGRFDDA-------IE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            G    A       IE                 CL     +A   F      G+ P   +
Sbjct: 301 KGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS 360

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            N LI  + ++ R  EA ++   M    L P++VTY++L+  L +
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 7/191 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI    ++ ++ EA  L  +   ++L P  +TY++LI    ++  +  A  L S + 
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIH 420

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y++++ +L +   +D ++  +L+  +    +  +    N +I G+ K+  
Sbjct: 421 DGGPSPNVITYNIMLDALCKIQLVDKAI--ELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM          L P + TY  +I  L  SGR   A  +F  + + G       YN 
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 341 LLKGYVKMGYL 351
           L   + K+ ++
Sbjct: 539 LFDAFSKIQHV 549


>gi|242036455|ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
 gi|241919476|gb|EER92620.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 263/608 (43%), Gaps = 65/608 (10%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAE-SYRAVPAPLWHSLL 133
           LS     Y +  LL+ L++   +E A A         R++  +A     +V      SLL
Sbjct: 165 LSCAPNSYTYNCLLDALAKAGRAEDAEA---------RLQEMVASCGEESVDRYTLTSLL 215

Query: 134 KNLCSSNSSIDLAYAVV------SWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
              C++    D A AV+      +W+ +H L        ++L  A  +  K+ +A  L  
Sbjct: 216 NCYCNAGRPED-ASAVLQRMSERAWVDEHVL--------TMLAVAFSKWGKVEDAVELIG 266

Query: 188 RQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           R     +     T   L+   AR   ++ A+++  KM   G+  D   YS++I+ L   N
Sbjct: 267 RMEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGN 326

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++  ++  KLY++++ D++  D +LL  +I  F + GD S    F+     V L P +A 
Sbjct: 327 EMGKAV--KLYEDMKRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFIN-ENAVHLKPGSAV 383

Query: 303 --YAAVITALSNSGRTIEAEAVFEELKESG-------------------LKPRTKAYNAL 341
             Y  ++  L+N G    A  +   +   G                   +KP + ++N +
Sbjct: 384 LLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIV 443

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K+  L  A  +  +M   G       ++ LI    N+ R + A  +  +M+    
Sbjct: 444 VCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDL 503

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+ F Y+ +  G   R +      +L+EM++S  +P       M+        +  A+ 
Sbjct: 504 KPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQ 563

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             D ML  G  PD +T++  ++   K G  + A  LF ++  + Y P    +NI+IN   
Sbjct: 564 FLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILINGFR 623

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  ++++ + ++  M ++GL P+VVTY  ++DI+ +SG+ D AI C+  + D+       
Sbjct: 624 KAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEK----- 678

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                  P+ +   SL++      R  EA  +   M E G  P+ + YT  +  L +  +
Sbjct: 679 ------PPTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGR 732

Query: 642 FHKVFSSY 649
                + Y
Sbjct: 733 TETAVNYY 740



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 209/513 (40%), Gaps = 60/513 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL--VIQSLTRTNKID--SSLLQ 250
           TYN L+ A A+    E A   + +M           Y+L  ++       + +  S++LQ
Sbjct: 173 TYNCLLDALAKAGRAEDAEARLQEMVASCGEESVDRYTLTSLLNCYCNAGRPEDASAVLQ 232

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++      ++  +D  +L  + V F+K G    A+  +G  + +G+ P   T   ++   
Sbjct: 233 RMS-----ERAWVDEHVLTMLAVAFSKWGKVEDAVELIGRMEALGMQPSEKTLTVLVHGF 287

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           +  GR   A  +F+++   G       Y+ L++G      +  A  +  +M+R  V PD 
Sbjct: 288 ARQGRVDVAMDMFDKMASYGFSVDLAMYSVLIEGLCDGNEMGKAVKLYEDMKRDRVTPDV 347

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS--FIYSRILAGYRDRGEWQRTFQVL 428
                +I+A+   G + +    + E  V H KP S   +Y+ IL G  + GE +   Q+L
Sbjct: 348 RLLKKMIEAFCRQGDFSTVGPFINENAV-HLKPGSAVLLYNVILEGLTNHGEVEAASQLL 406

Query: 429 KEMKSSG-------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
             M   G                   V+P++  +N+++    K   L  A+A    M+  
Sbjct: 407 SSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGL 466

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G +   + +N LI       R D A E+F +M++    P   TYN +   +  ++     
Sbjct: 467 GCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYGICRRKDTSAA 526

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----------------------- 566
             LL  MR     P +   T +V     SGR  +A++                       
Sbjct: 527 ADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNG 586

Query: 567 -CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C  G ++ A+  FR + +    P  +A N LIN F +  +  EA  +++ M   GL P 
Sbjct: 587 MCKIGETENALGLFRDISSKCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGLFPS 646

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYLFFNIYKML 658
           VVTY  ++    +  K  K  S      +YKM+
Sbjct: 647 VVTYNLMIDIWCKSGKIDKAISC-----VYKMI 674



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 139/603 (23%), Positives = 240/603 (39%), Gaps = 82/603 (13%)

Query: 81  RYDFTPLLNFLSENSNSESASA------------------LASSPSSLNRVE-----FKL 117
           RY  T LLN        E ASA                  LA + S   +VE        
Sbjct: 208 RYTLTSLLNCYCNAGRPEDASAVLQRMSERAWVDEHVLTMLAVAFSKWGKVEDAVELIGR 267

Query: 118 AESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL-LYSILIHAL--- 173
            E+    P+    ++L +  +    +D+A  +   +  +   +S +L +YS+LI  L   
Sbjct: 268 MEALGMQPSEKTLTVLVHGFARQGRVDVAMDMFDKMASYG--FSVDLAMYSVLIEGLCDG 325

Query: 174 ---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD- 227
              G++ KLYE     +R R+TP       +I A  R  D       ++   ++  H   
Sbjct: 326 NEMGKAVKLYEDM---KRDRVTPDVRLLKKMIEAFCRQGDFSTVGPFIN---ENAVHLKP 379

Query: 228 ---FINYSLVIQSLTRTNKID--SSLLQKLYKE---------------IECDKIELDGQL 267
               + Y+++++ LT   +++  S LL  + +                +  + ++ +   
Sbjct: 380 GSAVLLYNVILEGLTNHGEVEAASQLLSSMVRGGQRGSDDDTVGVHIVVISEDVKPNSDS 439

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N V+ G  K      A+       G+G   K   +  +I  L NS R  EA  +F ++K
Sbjct: 440 FNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMK 499

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +  LKP    YN+L  G  +      A  ++ EM  S   P     + ++     +GR  
Sbjct: 500 DLDLKPSEFTYNSLFYGICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRIT 559

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A   L EM      P+   YS  + G    GE +    + +++ S    PD   +N++I
Sbjct: 560 EALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDVVAHNILI 619

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + F K      A    + MLS+G+ P  +T+N +ID   K G+ D+A     +M +    
Sbjct: 620 NGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKMIDEEKP 679

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY  +++ L    R ++   L   M  +G  PN + YT  ++   + GR       
Sbjct: 680 PTVVTYTSLLDGLCNAGRPDEAIILWCKMSEKGCSPNEIAYTAFINGLCKCGR------- 732

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRDAEAFAVLQYMKENGLKP 624
               ++ AVN +  M+T        +L +L N+    G+  +  E   V+       L+ 
Sbjct: 733 ----TETAVNYYEEMKTKCFDLDIFSLLNLTNSLIAQGQASKGCELLKVV-------LQK 781

Query: 625 DVV 627
           DVV
Sbjct: 782 DVV 784


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 230/479 (48%), Gaps = 19/479 (3%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y IL++ L + EK  EA    +    +  +P    +NALI   +R  +++ AL +   M 
Sbjct: 314 YGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMT 373

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + ++ ++Q   RTN+++ +  +++ + +  + + ++    + V+    K+  
Sbjct: 374 LKGLKPNAVTHNTLLQGFCRTNQMEQA--EQVLEYLLSNVLSVNEDACSYVLHLLCKSSK 431

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESGLKPRTKAYN 339
              A++ +       +    +    ++  L   G+ +EA +  F    + GL   T   N
Sbjct: 432 FDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSN 491

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           ALL G  + G +++   V  EM   G++ D  +Y+ LI     +G+ E A  + ++M   
Sbjct: 492 ALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQ 551

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP+++ Y+ ++ G  D+G+     +VL E K  GV P+ + Y +M++ +   + + +A
Sbjct: 552 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 611

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           ++ F++++   +E   + +N LI  H K G +  A +L + M+     P   TY+ +I+ 
Sbjct: 612 VSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHG 671

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           +   +  E+ K +   MR +GL+PNV  YT L+  Y           C  G  DQ  +  
Sbjct: 672 MCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGY-----------CKLGQMDQIESIL 720

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + M ++ ++P+ +    +I+ + +     EA  +L  M  NG+ PD VTYT L K   +
Sbjct: 721 QEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCK 779



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 201/445 (45%), Gaps = 43/445 (9%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMS 217
           E +++ LI    R   + +A  +     L  L     T+N L+    R + +E+A  ++ 
Sbjct: 346 EFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLE 405

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +  +    +    S V+  L +++K DS+L  K+ K +    I+++  LL  ++ G  K
Sbjct: 406 YLLSNVLSVNEDACSYVLHLLCKSSKFDSAL--KIVKALLLRNIKVNDSLLTLLVCGLCK 463

Query: 278 AGDASKAMR-FLGMAQGVGLSPKTAT---------------------------------- 302
            G   +A+  +  +A   GL+  T T                                  
Sbjct: 464 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI 523

Query: 303 -YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  +I     SG+  EA  + E++ + G KP T  YN L+KG    G + D   V+ E 
Sbjct: 524 SYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEA 583

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  GV+P+ +TY+L+++ Y NA R ++A  +  ++  +  + +  +Y+ ++A +   G +
Sbjct: 584 KDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNF 643

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
              F++   M+SS + P    Y+ +I      + +  A   F+ M +EG+ P+   +  L
Sbjct: 644 TEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTAL 703

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I  + K G+ D+ E + +EM      P   TY IMI+   +    ++  +LL  M A G+
Sbjct: 704 IGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGI 763

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE 566
            P+ VTYT L   Y +    ++ ++
Sbjct: 764 SPDTVTYTVLQKGYCKENELEETLQ 788



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/528 (21%), Positives = 226/528 (42%), Gaps = 64/528 (12%)

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           ++ F+L   + + P   + N L+S+  ++++L K+  +   M + G   D   Y+  I +
Sbjct: 191 FDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINA 250

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             +  KID ++   L+ ++    +  +    N++I G  K+G   +A+ F G      ++
Sbjct: 251 YCKGGKIDEAV--GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVN 308

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  ++  L    +  EA +V  E+   G  P    +NAL+ GY + G + DA  V
Sbjct: 309 PSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRV 368

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL------------------------ 393
             +M   G+ P+  T++ L+  +    + E A  VL                        
Sbjct: 369 RDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCK 428

Query: 394 -----------KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV-LKEMKSSGVEPDTH 441
                      K + + + K N  + + ++ G    G+      +  +     G+  +T 
Sbjct: 429 SSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTT 488

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             N ++    +   +         M+  G+  D I++NTLI    K G+ + A +L E+M
Sbjct: 489 TSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ++G+ P T TYN ++  L ++ + +DV R+L   +  G++PN+ TY  +++ Y  + R 
Sbjct: 549 MKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRI 608

Query: 562 DDAIECLEGLSDQAVN---------------------AFRV---MRTDGLKPSNLALNSL 597
           D+A+     L    V                      AF++   MR+  + P+    +S+
Sbjct: 609 DNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSI 668

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           I+    +    EA  + + M+  GL P+V  YT L+    ++ +  ++
Sbjct: 669 IHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQI 716



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 209/467 (44%), Gaps = 39/467 (8%)

Query: 215 LMSKMRQDGYHCDFINYSL-----VIQSLTRTNKIDSSLLQ--KLYKEIECDKIELDGQL 267
           L S+ +  G+H  F  + L     V  SL   N + SSL++  +L+K          G +
Sbjct: 178 LCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGV 237

Query: 268 LNDV------IVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           L DV      I  + K G   +A+  FL M +G G+ P   TY  +I  L  SGR  EA 
Sbjct: 238 LIDVYTYATAINAYCKGGKIDEAVGLFLKMGEG-GVLPNVVTYNNLIDGLCKSGRLEEAL 296

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
                + E+ + P    Y  L+ G VK     +A  V+ EM   G  P+E  ++ LID Y
Sbjct: 297 MFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY 356

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
           +  G  + A  V  +M +   KPN+  ++ +L G+    + ++  QVL+ + S+ +  + 
Sbjct: 357 SRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNE 416

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL-FE 499
              + ++    K +    A+     +L   I+ +      L+    KCG++  A +L F 
Sbjct: 417 DACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFR 476

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
              ++G    TTT N ++  L E+   E+V  +   M  +GL+ + ++Y TL+    +SG
Sbjct: 477 LADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSG 536

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           + ++A +  E +  Q           G KP     N L+    +  +  +   VL   K+
Sbjct: 537 KIEEAFKLKEKMMKQ-----------GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585

Query: 620 NGLKPDVVTYTTLMKALIRVDK------------FHKVFSSYLFFNI 654
           +G+ P++ TY  +++     D+            ++KV  SY+ +NI
Sbjct: 586 HGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNI 632



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 15/259 (5%)

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           E A   L+  E SH + +  IY  IL        +   F       S GV P     N +
Sbjct: 155 EIASAFLELGERSHGELDLLIY--ILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFL 212

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           + +  K N LH +   FD M   G+  D  T+ T I+ + K G+ D A  LF +M E G 
Sbjct: 213 MSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGV 272

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN +I+ L +  R E+     G M    + P++VTY  LV+   +  +FD+A  
Sbjct: 273 LPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEA-- 330

Query: 567 CLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                     N+  V M + G  P+    N+LI+ +       +A  V   M   GLKP+
Sbjct: 331 ----------NSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPN 380

Query: 626 VVTYTTLMKALIRVDKFHK 644
            VT+ TL++   R ++  +
Sbjct: 381 AVTHNTLLQGFCRTNQMEQ 399



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 118/283 (41%), Gaps = 72/283 (25%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +S K+ EAF L ++   Q   P   TYN L+   A    ++    ++ + +
Sbjct: 525 YNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAK 584

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   +   Y+L+++     ++ID+++   L+ ++  +K+EL   + N +I   +KAG+
Sbjct: 585 DHGVVPNIYTYALMLEGYCNADRIDNAV--SLFNKLVYNKVELSYVVYNILIAAHSKAGN 642

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A +     +   + P   TY+++I  +  +    EA+ +FEE++  GL P    Y A
Sbjct: 643 FTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTA 702

Query: 341 LLKGYVKMGYL-----------------------------------KDAEFVVSEMERSG 365
           L+ GY K+G +                                   K+A  +++EM  +G
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762

Query: 366 VLPD------------------------------EHTYSLLID 378
           + PD                              E TY+ L+D
Sbjct: 763 ISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEITYTTLVD 805


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 223/481 (46%), Gaps = 25/481 (5%)

Query: 166 YSILIHALG-RSEKLYEAFLLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G R +      LL + +    R    +Y   I    +   LE+A  ++ KM 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   D +  +++IQ L    ++  +  + ++ +++    + D      ++     +GD
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADA--KDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +          +  G +    +Y A + AL   GR  EA  VF+E+K+ G+ P+  +YN+
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K      A  + + M   G  P+ +T+ L I+ +  +G    A   LK  E+  
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKA---LKRYELMK 443

Query: 401 AK---PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +K   P+    + +L G    G      +V  E+K+ G+ PD   Y +MI    K +   
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AM  F  M+     PD +  N+LID  +K GR + A ++F E++E    P   TYN ++
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             LG + + ++V +LL  M +    PN++TY T++D             C  G  + A++
Sbjct: 564 AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL-----------CKNGEVNYALD 612

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M  +G  P   + N+++    ++ R  EAF +   MK+  L PD  T  T++ + +
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFV 671

Query: 638 R 638
           R
Sbjct: 672 R 672



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 247/574 (43%), Gaps = 64/574 (11%)

Query: 128  LWHSLLKNLCSS-----NSSIDLAYAVV----SW-----LQKHNLCYSYELLYSILIHAL 173
            ++  +++N C+      NS ID+ Y       +W     L++ NL    +  Y+ L+  L
Sbjct: 508  IFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL-EPTDCTYNTLLAGL 566

Query: 174  GRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            GR  K+ E   L +        P  +TYN ++    +N ++  AL+++  M  +G   D 
Sbjct: 567  GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626

Query: 229  INYSLVIQSLTRTNKID-----------------------------SSLLQKLYKEIECD 259
             +Y+ V+  L + +++D                             S L+++    +   
Sbjct: 627  SSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREY 686

Query: 260  KIELDGQL----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
             ++ D ++    ++ ++ G  K     K++ F       GL       + +I  L     
Sbjct: 687  ILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKE 746

Query: 316  TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             + A  + ++ +  G+  +T +YNAL+ G V    +  AE + SEM+R G  PDE TY L
Sbjct: 747  ALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHL 806

Query: 376  LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            ++DA   + R E    + +EM     K     Y+ I++G            +  ++ S G
Sbjct: 807  ILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEG 866

Query: 436  VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              P    Y  ++D   K   +  A A FD ML  G EP+   +N L++ +   G  ++  
Sbjct: 867  FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVC 926

Query: 496  ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            ELFE M E+G  P   +Y ++I+ L    R  D       +   GL P+++TY  L+   
Sbjct: 927  ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 556  GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            G+SGR ++A+           + +  M   G+ P+    NSLI   G+  + AEA  + +
Sbjct: 987  GKSGRLEEAL-----------SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035

Query: 616  YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +   G KP+V TY  L++           F++Y
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAY 1069



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 214/467 (45%), Gaps = 19/467 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL 252
           TY+ L+ A  +  D E  + L+ +M   G   +  +Y++ I+ L +  +++ +  +L+K+
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +E  C    +   +L  ++    +  DA     F  M +     P   TY  ++    +
Sbjct: 268 EEE-GCKPDVVTNTVLIQILCDAGRLADAKDV--FWKM-KASDQKPDRVTYITLLDKCGD 323

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           SG +     ++  LK  G      +Y A +    ++G + +A  V  EM++ G++P +++
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYS 383

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LI  +  A R+  A  +   M +    PN + +   +  +   GE  +  +  + MK
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G+ PD    N ++    K   L  A   F  + + GI PD IT+  +I C  K    D
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++F EM E    P     N +I++L +  R  +  ++   ++   L P   TY TL+
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
              G+ G+  + ++ LEG           M ++   P+ +  N++++   ++     A  
Sbjct: 564 AGLGREGKVKEVMQLLEG-----------MNSNSFPPNIITYNTVLDCLCKNGEVNYALD 612

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLS 659
           +L  M  NG  PD+ +Y T+M  L++ D+  + F  ++F  + K+L+
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAF--WMFCQMKKVLA 657



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 208/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+ A GR   + + F L QRQ  +    T+  +  A      L  A   +  M++ G   
Sbjct: 110 LMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVL 169

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ +I  L ++   D   +  +YK +  D +    +  + +++ F K  DA   + 
Sbjct: 170 NAYTYNGLIYFLVKSG-FDREAMD-VYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVG 227

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            LG  +  G+ P   +Y   I  L  +GR  EA  +  +++E G KP       L++   
Sbjct: 228 LLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILC 287

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L DA+ V  +M+ S   PD  TY  L+D   ++G   S   +   ++      N  
Sbjct: 288 DAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVV 347

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+  +      G       V  EMK  G+ P  + YN +I  F K +  + A+  F+ M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G  P+  T    I+ H K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++             +D+A+  F  M  + 
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASN-----------ADEAMKIFAEMIENR 516

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LA+NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVM 576



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 12/359 (3%)

Query: 276 AKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           A A D  +A+  FL +A+   +   T +   ++  +   GR  +   VF+ ++   +K  
Sbjct: 76  AAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKAN 135

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              +  +       G L+ A   +  M+ +G++ + +TY+ LI     +G    A  V K
Sbjct: 136 VGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYK 195

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M      P    YS ++  +  R + +    +L EM++ GV P+ + Y + I   G+  
Sbjct: 196 AMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAG 255

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A     +M  EG +PD +T   LI      GR   A+++F +M+     P   TY 
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +++  G+      V  +   ++A G   NVV+YT  VD   Q GR D+A++        
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALD-------- 367

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               F  M+  G+ P   + NSLI+ F +  R   A  +  +M  +G  P+  T+   +
Sbjct: 368 ---VFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFI 423



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 37/357 (10%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +YNALI      D ++ A  L S+M++ G   D   Y L++ ++ ++ +I+         
Sbjct: 768  SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE--------- 818

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                D +++  ++ N                         G      TY  +I+ L  S 
Sbjct: 819  ----DMLKIQEEMHNK------------------------GYKSTYVTYNTIISGLVKSK 850

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               EA  ++ +L   G  P    Y  LL G +K G ++DAE +  EM   G  P+   Y+
Sbjct: 851  MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN 910

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +L++ Y  AG  E    + + M      P+   Y+ ++      G         K++   
Sbjct: 911  ILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM 970

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            G+EPD   YN++I   GK   L  A++ ++ M  +GI P+  T+N+LI    K G+   A
Sbjct: 971  GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEA 1030

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             +++EE+  +G+ P   TYN +I         E+     G M   G  PN  TY  L
Sbjct: 1031 GKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 15/356 (4%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVS 359
           A  +  +  S    + E   E       +PR    T++ N +L+     G + D   V  
Sbjct: 66  AGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFD 125

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M+R  +  +  T+  +  A    G   SA + L  M+ +    N++ Y+ ++      G
Sbjct: 126 LMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSG 185

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +    V K M + GV P    Y+V++  FGK       +     M + G+ P+  ++ 
Sbjct: 186 FDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYT 245

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
             I    + GR + A  +  +M+E G  P   T  ++I +L +  R  D K +   M+A 
Sbjct: 246 ICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS 305

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
              P+ VTY TL+D  G SG            S      +  ++ DG   + ++  + ++
Sbjct: 306 DQKPDRVTYITLLDKCGDSGD-----------SRSVSEIWNALKADGYNDNVVSYTAAVD 354

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
           A  +  R  EA  V   MK+ G+ P   +Y +L+   ++ D+F++    +   NI+
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIH 410


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 11/339 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P+   +  ++  L   G    A+ VF+E++  G++    ++N ++ G  + G L  A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E +   M  +GV PD +TY  LI      GR E AR V ++M     KPN+ +++ ++  
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  +G+ +   ++ +EM+  GV PD   YN +++   +   L  A      M S G+ PD
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           T+T+ TLID + K    D A E+ + M   G      TY  +I+ L +  R  D +R+LG
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL P+  TYT ++D +           C +G     +   + M+  G KP  +  
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAF-----------CRKGDVKTGLRLLKEMQNKGRKPGVVTY 523

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           N ++N F +  +   A  +L  M   G+ PD +TY  L+
Sbjct: 524 NVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 169/338 (50%), Gaps = 7/338 (2%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           L+++L+  L R  +L  A      + S+  R T +++N +IS   R  DL+ A  L  +M
Sbjct: 242 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 301

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D   Y  +IQ L R  +I+ +  + +++++    ++ +  +   +I    K G
Sbjct: 302 SEAGVTPDVYTYGALIQGLCRVGRIEDA--RGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           DA   +      +  G+ P   TY A++  L  +     A  +  E++ +GL+P T  Y 
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 419

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY K   L  A  +   M   GV  DE TY+ LI   + AGR   A  VL EM  +
Sbjct: 420 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 479

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P++  Y+ ++  +  +G+ +   ++LKEM++ G +P    YNV+++ F K   + +A
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 539

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
               + M++ G+ PD IT+N L+D H K G+    EEL
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 8/336 (2%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           ++++++ L R  ++ S+  Q ++ E++   +       N +I G  +AGD   A      
Sbjct: 243 FNVLMRDLVRLGELASA--QNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRR 300

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G++P   TY A+I  L   GR  +A  VFE++   G+KP    +  L+  + K G 
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG- 359

Query: 351 LKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
             DAE ++    EM   GV PD  TY+ +++    A   +SA  ++ EM  +  +P++  
Sbjct: 360 --DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ GY    E     ++ + M + GV  D   Y  +I    K      A      M+
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+EPD  T+  +ID   + G       L +EMQ +G  P   TYN+++N   +  + +
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +   LL  M   G+ P+ +TY  L+D + + G+  D
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 573



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 51/352 (14%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L + +G+ L P + T       +S      EA A + +L ++GL P  K +N L++  V
Sbjct: 197 LLALRRGIRLEPTSCT-----GLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLV 251

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G L  A+ V  EM+  GV     +++ +I     AG  + A       E  H      
Sbjct: 252 RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA-------ETLH------ 298

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                                 + M  +GV PD + Y  +I    +   +  A   F++M
Sbjct: 299 ----------------------RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G++P+ + +  LID H K G  +   EL  EM+ERG  P   TYN ++N L      
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           +    ++  MR+ GL P+ VTYTTL+D Y +    D A+E  + +  + V    V  T  
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYT-- 454

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                    +LI+   +  R A+A  VL  M E GL+PD  TYT ++ A  R
Sbjct: 455 ---------ALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 497



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 166/360 (46%), Gaps = 11/360 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +N L+    R  +L  A N+  +M+  G     ++++ +I  + R   +D +  + L++ 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA--ETLHRR 300

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D      +I G  + G    A        G G+ P    +  +I A    G 
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG- 359

Query: 316 TIEAEAVFE---ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             +AE + E   E++E G++P    YNA++ G  +   LK A  +V EM  +G+ PD  T
Sbjct: 360 --DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LID Y      + A  + + M       +   Y+ +++G    G      +VL EM 
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +G+EPD   Y ++ID F +   +   +     M ++G +P  +T+N +++   K G+  
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A+ L   M   G  P   TYNI+++   +  +  D++ L     A+G +P++  YT++V
Sbjct: 538 NADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPDLGVYTSIV 594



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 24/236 (10%)

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++  +G+ P+   +NV++    +   L  A   FD M S G+    +++NT+I    + G
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D AE L   M E G  P   TY  +I  L    R ED + +   M  +G+ PN V +T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV------------------------MRTD 585
            L+D + + G  +  +E    + ++ V    V                        MR+ 
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           GL+P  +   +LI+ + +++    A  + Q M   G+  D VTYT L+  L +  +
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 19/477 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E+ Y+ILIHAL +   + +A  L  + R     +T   YN+LI+   +   L++A  L+S
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M ++G      +YS +I  L R   + S +  +L++E+    I  +      +I GF K
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCM--ELHREMAERGIAWNNYTFTALINGFCK 490

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A R         + P   T+  +I      G   +A  +++++ E GLKP    
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G      +  A   V+++E S  + +  + + L+  +   GR+     +  EM 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V   K +   ++ I+     + + +++  + +EMK  GV+PD  FY  MID   K   + 
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +D+M+ +G  P+T+T   LI+   K G    AE L +EM      P   TYN  +
Sbjct: 671 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +    +   E  K L   M  QG L ++V++  L+    ++G+  +AI+ +  +++    
Sbjct: 731 DYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES--- 786

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   G  P  ++ +++I+   +     +AF +   M   GLKPDVV Y   ++
Sbjct: 787 --------GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 207/482 (42%), Gaps = 36/482 (7%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S+  + + + YN L+    +N  +++A+ + + M   G   D + Y  ++    R  +++
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFA-----KAGDASKAMRFLGMAQGVGLSPKT 300
            +L       I  D I L G + ++    F      K     +A         +G+ P  
Sbjct: 286 MAL------RITHDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y A+I  L  + R  +A+ +F+E+   GL+P    Y  L+    K G ++DA  +  +
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+    + Y+ LI+ Y   G  + AR +L  M      P +  YS ++AG    G+
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +EM   G+  + + +  +I+ F K   +  A   FD+M+   + P+ +T+N 
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I+ +   G   +A +L+++M E G  P   TY  +I+ L            + ++    
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN----------------------- 577
            + N  + T L+  + + GRF +     + ++ + V                        
Sbjct: 579 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 578 -AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M+  G+KP ++    +I+A  +++   +A      M  +G  P+ VT+T L+  L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 698

Query: 637 IR 638
            +
Sbjct: 699 CK 700



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 24/386 (6%)

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG++   G++    T + ++ +L    +   A  +F+++ +SG+      Y A ++ Y +
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L  A  +V  ME  GV      Y++L+       R + A  V   M       +   
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++ G+    E +   ++  +M   G  P     + MID   K   +  A +   ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ P+   +N LID   K  R+D A+ LF+EM  RG  P   TY I+I+ L ++   E
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------- 578
           D   L   MR +G+   V  Y +L++ Y + G  D A   L G+  + +           
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 579 ---------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                           R M   G+  +N    +LIN F +D++  EA  +   M ++ + 
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P+ VT+  +++    V    K F  Y
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLY 536



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/462 (20%), Positives = 187/462 (40%), Gaps = 48/462 (10%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A +L  KM Q G H D   Y+  I++   +  +D +  + L   +E + ++      N +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA--RGLVVRMESEGVKASAVPYNVL 239

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G  K     +A+    +   +G++    TY  ++           A  +  ++   G 
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P     + ++    K   +++A  +  ++   G++P+   Y+ LID      R++ A  
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + KEM     +PN   Y+ ++     RG  +    +  +M+  G++   + YN +I+ + 
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A      M+ EG+ P   +++ LI    + G      EL  EM ERG      
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 479

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+  +IN   + ++ ++  RL   M    ++PN VT+  +++ Y           CL G 
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-----------CLVGN 528

Query: 572 SDQAVNAFRVMRTDGLKP-----------------------------------SNLALNS 596
             +A   +  M   GLKP                                   +N +L +
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           L+  F  + R  E + +   M   G+K D+V++T ++ A ++
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 13/405 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++ SL +  +   +L + L+ ++    + LD  +    I  + ++ +   A   +   
Sbjct: 167 SQILFSLVKIRQF--ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+      Y  ++  L  + R  EA  V   +   G+      Y  L+ G+ +M  L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  +  +M R G +P E   S +ID        E A  +  ++      PN F Y+ +
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +        +    ++ KEM   G+EP+   Y ++I    K   +  A+  FD+M  +GI
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +     +N+LI+ + K G  DRA  L   M + G  P   +Y+ +I  L           
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 464

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +G+  N  T+T L++ + +  + D+A    + + D  V            P+ 
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV-----------IPNE 513

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N +I  +       +AF +   M E GLKPD  TY +L+  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 170/395 (43%), Gaps = 14/395 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI+   + +K+ EA  L  +     + P  +T+N +I       ++ KA  L  +M 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y  +I  L  T+ +  +   +   ++E     L+   L  ++ GF + G 
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKA--NEFVADLENSYAVLNNFSLTALLYGFFREGR 598

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++           G+     ++  ++ A        ++  +F E+KE G+KP    Y  
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K   +  A     +M   G  P+  T+++LI+    +G   SA ++ KEM   +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN F Y+  L  +   G+ ++   +   M    +     F N++I    K   +  A+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAI 777

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
               ++   G  PD I+++T+I    K G  ++A EL+ EM  +G  P    YNI I   
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           N+ GE ++      +  NM   G+ PN  TY  L+
Sbjct: 838 NVHGESDK---ALGIYTNMIRSGVQPNWDTYRALL 869



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+++A  +    EK    F   + Q + P  + Y  +I A ++ +++ +ALN   +M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DGY  + + ++++I +L ++  + S+ L  L KE+    +  +    N  +  FA  GD
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAEL--LCKEMLAGNVLPNKFTYNCFLDYFATEGD 738

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA + L  A   G      ++  +I  L  +G+  EA  +  ++ ESG  P   +Y+ 
Sbjct: 739 MEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 797

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    KMG +  A  + +EM   G+ PD   Y++ I      G  + A  +   M  S 
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857

Query: 401 AKPNSFIYSRILAG 414
            +PN   Y  +L+G
Sbjct: 858 VQPNWDTYRALLSG 871


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 11/339 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P+   +  ++  L   G    A+ VF+E++  G++    ++N ++ G  + G L  A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E +   M  +GV PD +TY  LI      GR E AR V ++M     KPN+ +++ ++  
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +  +G+ +   ++ +EM+  GV PD   YN +++   +   L  A      M S G+ PD
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           T+T+ TLID + K    D A E+ + M   G      TY  +I+ L +  R  D +R+LG
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   GL P+  TYT ++D +           C +G     +   + M+  G KP  +  
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAF-----------CRKGDVKTGLRLLKEMQNKGRKPGVVTY 399

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           N ++N F +  +   A  +L  M   G+ PD +TY  L+
Sbjct: 400 NVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 14/375 (3%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           + +L N ++    + G+ + A       Q  G+     ++  +I+ +  +G    AE + 
Sbjct: 115 EAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLH 174

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             + E+G+ P    Y AL++G  ++G ++DA  V  +M   G+ P+   +++LIDA+   
Sbjct: 175 RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKK 234

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G  E+   + +EM     +P++  Y+ I+ G     + +    ++ EM+S+G+ PDT  Y
Sbjct: 235 GDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTY 294

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
             +ID + K   L  AM     M++EG+  D +T+  LI    K GR   AE +  EM E
Sbjct: 295 TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P  TTY ++I+    +   +   RLL  M+ +G  P VVTY  +++ + + G+  +
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 414

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A        D  +NA   M   G+ P ++  N L++      +  +   + +     G  
Sbjct: 415 A--------DMLLNA---MINIGVSPDDITYNILLDGH---CKHGKVTDIEELKSAKGTV 460

Query: 624 PDVVTYTTLMKALIR 638
           PD+  YT+++  +++
Sbjct: 461 PDLGVYTSIVGEIVK 475



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 162/380 (42%), Gaps = 64/380 (16%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L + +G+ L P + T       +S      EA A + +L ++GL P  K +N L++  V
Sbjct: 73  LLALRRGIRLEPTSCT-----GLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLV 127

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           ++G L  A+ V  EM+  GV     +++ +I     AG  + A       E  H      
Sbjct: 128 RLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA-------ETLH------ 174

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                                 + M  +GV PD + Y  +I    +   +  A   F++M
Sbjct: 175 ----------------------RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G++P+ + +  LID H K G  +   EL  EM+ERG  P   TYN ++N L      
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC------------------- 567
           +    ++  MR+ GL P+ VTYTTL+D Y +    D A+E                    
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 568 LEGLSD--QAVNAFRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           + GLS   ++ +A RV   M   GL+P N     +I+AF           +L+ M+  G 
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392

Query: 623 KPDVVTYTTLMKALIRVDKF 642
           KP VVTY  +M    ++ + 
Sbjct: 393 KPGVVTYNVIMNGFCKLGQM 412


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 21/455 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T + LI+       +  + +++ K+ + GY  + I  + +++ L    ++  SL    +
Sbjct: 46  VTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL--HFH 103

Query: 254 KEIECDKIELD----GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            ++     ++D    G LLN    G  K G+   A++ L   +     P    Y+ +I  
Sbjct: 104 DKVVAQGFQMDQVSYGILLN----GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L       EA  ++ E+   G+ P    Y  L+ G+   G L +A  +++EM    + P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            +TY+ LID     G+ + ++ +L  M     KP+  IYS ++ GY   GE Q+  Q+  
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M  +GV PD + YN++I+   K   +  AM     ML + + PDT+T+++LID   K G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R     +L +EM  RG      TYN +++ L + +  +    L   M+ +G+ PN  TYT
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+D   + GR             QA+  F+ +   G          +I+   ++    E
Sbjct: 400 ALIDGLCKGGRLKKG---------QAL--FQHLLVKGYCIDVWTYTVMISGLCKEGMFDE 448

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           A A+   M++NG  P+ VT+  ++++L+  D+  K
Sbjct: 449 ALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK 483



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 2/397 (0%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           +++Q  ++  ++Y  L++   +  +   A+ L+  +       D + YS +I  L +   
Sbjct: 106 VVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKL 165

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +    LY E+    I  D      +I GF  AG   +A   L       ++P   TY
Sbjct: 166 VDEA--YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY 223

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G+  E++ +   + + G+KP    Y+ L+ GY  +G ++ A+ +   M +
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           +GV PD ++Y+++I+      R + A  +L+EM   +  P++  YS ++ G    G    
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + KEM   G   +   YN ++D   K   L  A+A F +M   GI+P+  T+  LID
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR  + + LF+ +  +GY     TY +MI+ L ++  +++   +   M   G +P
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIP 463

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           N VT+  ++    +    D A + L  +  + +  FR
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFR 500



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 191/418 (45%), Gaps = 15/418 (3%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I +  ++ SL +     + +   L K++E   I  D   L+ +I  F   G  + +   
Sbjct: 10  IIEFGKILGSLVKMKHYPTVI--SLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T     ++  L   G   ++    +++   G +    +Y  LL G  K
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  + A  ++  +E     PD   YS +ID        + A  +  EM      P+   
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G+   G+    F +L EM    + P+ + YN +IDT  K   +  +      M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G++PD + ++ L+D +   G   +A+++F  M + G  P   +YNI+IN L + +R +
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   LL  M  + ++P+ VTY++L+D   + GR    ++  + +  +             
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG------------ 355

Query: 588 KPSNLAL-NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +P+NL   NSL++   ++Q   +A A+   MKE G++P+  TYT L+  L +  +  K
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 17/359 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   T + +I    + G+   + +V  ++ + G +P T   N L+KG    G +K +
Sbjct: 40  GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                ++   G   D+ +Y +L++     G    A  +L+ +E    +P+  +YS I+ G
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     + +  EM + G+ PD   Y  +I  F     L  A    + M+ + I P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWEDVKR 531
             T+NTLID   K G+   ++ L   M ++G  P    Y+I+++   L+GE ++    K+
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK---AKQ 276

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           +   M   G+ P+V +Y  +++   +  R D           +A+N  R M    + P  
Sbjct: 277 IFLVMVQTGVNPDVYSYNIIINGLCKGKRVD-----------EAMNLLREMLHKNMIPDT 325

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  +SLI+   +  R      + + M   G   ++VTY +L+  L +     K  + ++
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFM 384



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 46/320 (14%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    +  +L   VKM +      +  +ME  G++PD  T S+LI+ + + G+   +  V
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +PN+ I + ++ G   +GE +++                HF+         
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSL---------------HFH--------- 103

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                      D+++++G + D +++  L++   K G    A +L   +++R   P    
Sbjct: 104 -----------DKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVM 152

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y+ +I+ L + +  ++   L   M A+G+ P+V+TYTTL+  +           CL G  
Sbjct: 153 YSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF-----------CLAGQL 201

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A      M    + P+    N+LI+   ++ +  E+  +L  M + G+KPDVV Y+ L
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261

Query: 633 MKALIRVDKFHKVFSSYLFF 652
           M     V +  K    +L  
Sbjct: 262 MDGYCLVGEVQKAKQIFLVM 281


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 248/556 (44%), Gaps = 42/556 (7%)

Query: 71  DDDVLSLQKQR--------YDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYR 122
           D+ VLS  + R         +F  +L +L +  N    + L+ S            ES  
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKN-HYPTVLSLSTQ---------MESKG 97

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
             P     S+L N       +  A++V + + K  LC + ++  ++L H           
Sbjct: 98  VKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHD---------- 147

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            +L+    L  +TY  LI+   +      AL ++ ++     + + + YS +I  L +  
Sbjct: 148 HVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDK 207

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +  +    LY E+   +I       + +I GF   G    A R         ++P   T
Sbjct: 208 LVTDAY--GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYT 265

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  ++ AL   G+  EA+ V   + + G++P    YN L+ GY  +  +  A+ V+S + 
Sbjct: 266 FNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIIS 325

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R  V P+  +Y+++I+ +      + A  +  EM      P+   Y+ ++ G    G   
Sbjct: 326 RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIP 385

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++++ EM ++ +  D   YN +ID F K   +  A+A   ++   GI+P+  T+N LI
Sbjct: 386 YAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILI 445

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D   K G+   A+++F+++  +GY     TYNIMIN L ++  +++ + LL  M   G++
Sbjct: 446 DGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGII 505

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA--VNAFRVMRTDGLKPSNLALNSLIN- 599
           P+ VTY T++         + A + L  +  +   V AF + RT   +  NL +N LI+ 
Sbjct: 506 PDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLNLGMN-LISL 564

Query: 600 --------AFGEDQRD 607
                   +FGE+ +D
Sbjct: 565 LFSALECFSFGEETKD 580



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 213/477 (44%), Gaps = 31/477 (6%)

Query: 188 RQRLTPLTYNALISACARNDD-LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           RQ  + + +N +++   +  +     L+L ++M   G   D    S++I       ++  
Sbjct: 61  RQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTF 120

Query: 247 --SLLQKLYKEIEC------------DKIELDGQLLNDV-----IVGFAKAGDASKAMRF 287
             S+  K+ K   C            D +   G  LN V     I G  K G    A++ 
Sbjct: 121 AFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQV 180

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L   +G  ++     Y+ +I  L       +A  ++ E+    + P    +++L+ G+  
Sbjct: 181 LRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCI 240

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
           +G  KDA  + +EM    + PD +T+++L+DA    G+ + A+ V+  M     +P    
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVT 300

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ GY    E  +   VL  +    V P++  YN+MI+ F K   +  A+  F  M 
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMC 360

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             GI P  +T+N+LID   K GR   A EL +EM          TYN +I++  + +  +
Sbjct: 361 CRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVD 420

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
               L+  ++  G+ PN+ TY  L+D   + G+  +A +  + L  +  N          
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV--------- 471

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             +    N +IN   ++    EA  +L  M++NG+ PD VTY T+++AL   D+  K
Sbjct: 472 --NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEK 526


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 19/477 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E+ Y+ILIHAL +   + +A  L  + R     +T   YN+LI+   +   L++A  L+S
Sbjct: 396 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 455

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M ++G      +YS +I  L R   + S +  +L++E+    I  +      +I GF K
Sbjct: 456 GMVKEGLTPTAASYSPLIAGLCRNGDLSSCM--ELHREMAERGIAWNNYTFTALINGFCK 513

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A R         + P   T+  +I      G   +A  +++++ E GLKP    
Sbjct: 514 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 573

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G      +  A   V+++E S  + +  + + L+  +   GR+     +  EM 
Sbjct: 574 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 633

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V   K +   ++ I+     + + +++  + +EMK  GV+PD  FY  MID   K   + 
Sbjct: 634 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 693

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +D+M+ +G  P+T+T   LI+   K G    AE L +EM      P   TYN  +
Sbjct: 694 QALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 753

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +    +   E  K L   M  QG L ++V++  L+    ++G+  +AI+ +  +++    
Sbjct: 754 DYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES--- 809

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   G  P  ++ +++I+   +     +AF +   M   GLKPDVV Y   ++
Sbjct: 810 --------GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 858



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 207/482 (42%), Gaps = 36/482 (7%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S+  + + + YN L+    +N  +++A+ + + M   G   D + Y  ++    R  +++
Sbjct: 249 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 308

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFA-----KAGDASKAMRFLGMAQGVGLSPKT 300
            +L       I  D I L G + ++    F      K     +A         +G+ P  
Sbjct: 309 MAL------RITHDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 361

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y A+I  L  + R  +A+ +F+E+   GL+P    Y  L+    K G ++DA  +  +
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 421

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+    + Y+ LI+ Y   G  + AR +L  M      P +  YS ++AG    G+
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 481

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +EM   G+  + + +  +I+ F K   +  A   FD+M+   + P+ +T+N 
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 541

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I+ +   G   +A +L+++M E G  P   TY  +I+ L            + ++    
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 601

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN----------------------- 577
            + N  + T L+  + + GRF +     + ++ + V                        
Sbjct: 602 AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 661

Query: 578 -AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M+  G+KP ++    +I+A  +++   +A      M  +G  P+ VT+T L+  L
Sbjct: 662 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNL 721

Query: 637 IR 638
            +
Sbjct: 722 CK 723



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 24/386 (6%)

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG++   G++    T + ++ +L    +   A  +F+++ +SG+      Y A ++ Y +
Sbjct: 174 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 233

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L  A  +V  ME  GV      Y++L+       R + A  V   M       +   
Sbjct: 234 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 293

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++ G+    E +   ++  +M   G  P     + MID   K   +  A +   ++ 
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 353

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ P+   +N LID   K  R+D A+ LF+EM  RG  P   TY I+I+ L ++   E
Sbjct: 354 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 413

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------- 578
           D   L   MR +G+   V  Y +L++ Y + G  D A   L G+  + +           
Sbjct: 414 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473

Query: 579 ---------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                           R M   G+  +N    +LIN F +D++  EA  +   M ++ + 
Sbjct: 474 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 533

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P+ VT+  +++    V    K F  Y
Sbjct: 534 PNEVTFNVMIEGYCLVGNIRKAFQLY 559



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 13/405 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++ SL +  +   +L + L+ ++    + LD  +    I  + ++ +   A   +   
Sbjct: 190 SQILFSLVKIRQF--ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 247

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+      Y  ++  L  + R  EA  V   +   G+      Y  L+ G+ +M  L
Sbjct: 248 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 307

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  +  +M R G +P E   S +ID        E A  +  ++      PN F Y+ +
Sbjct: 308 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 367

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +        +    ++ KEM   G+EP+   Y ++I    K   +  A+  FD+M  +GI
Sbjct: 368 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +     +N+LI+ + K G  DRA  L   M + G  P   +Y+ +I  L           
Sbjct: 428 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCME 487

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +G+  N  T+T L++ + +  + D+A    + + D  V            P+ 
Sbjct: 488 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV-----------IPNE 536

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N +I  +       +AF +   M E GLKPD  TY +L+  L
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/462 (20%), Positives = 187/462 (40%), Gaps = 48/462 (10%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A +L  KM Q G H D   Y+  I++   +  +D +  + L   +E + ++      N +
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA--RGLVVRMESEGVKASAVPYNVL 262

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G  K     +A+    +   +G++    TY  ++           A  +  ++   G 
Sbjct: 263 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 322

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P     + ++    K   +++A  +  ++   G++P+   Y+ LID      R++ A  
Sbjct: 323 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 382

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + KEM     +PN   Y+ ++     RG  +    +  +M+  G++   + YN +I+ + 
Sbjct: 383 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 442

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A      M+ EG+ P   +++ LI    + G      EL  EM ERG      
Sbjct: 443 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNY 502

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+  +IN   + ++ ++  RL   M    ++PN VT+  +++ Y           CL G 
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-----------CLVGN 551

Query: 572 SDQAVNAFRVMRTDGLKP-----------------------------------SNLALNS 596
             +A   +  M   GLKP                                   +N +L +
Sbjct: 552 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 611

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           L+  F  + R  E + +   M   G+K D+V++T ++ A ++
Sbjct: 612 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 653



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 170/395 (43%), Gaps = 14/395 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI+   + +K+ EA  L  +     + P  +T+N +I       ++ KA  L  +M 
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y  +I  L  T+ +  +   +   ++E     L+   L  ++ GF + G 
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKA--NEFVADLENSYAVLNNFSLTALLYGFFREGR 621

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++           G+     ++  ++ A        ++  +F E+KE G+KP    Y  
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K   +  A     +M   G  P+  T+++LI+    +G   SA ++ KEM   +
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN F Y+  L  +   G+ ++   +   M    +     F N++I    K   +  A+
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF-NILIKGLCKAGKIQEAI 800

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI--- 517
               ++   G  PD I+++T+I    K G  ++A EL+ EM  +G  P    YNI I   
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 860

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           N+ GE ++   +     NM   G+ PN  TY  L+
Sbjct: 861 NVHGESDKALGIYT---NMIRSGVQPNWDTYRALL 892



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+++A  +    EK    F   + Q + P  + Y  +I A ++ +++ +ALN   +M 
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 703

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DGY  + + ++++I +L ++  + S+ L  L KE+    +  +    N  +  FA  GD
Sbjct: 704 VDGYSPNTVTHTVLINNLCKSGYLGSAEL--LCKEMLAGNVLPNKFTYNCFLDYFATEGD 761

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA + L  A   G      ++  +I  L  +G+  EA  +  ++ ESG  P   +Y+ 
Sbjct: 762 MEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYST 820

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    KMG +  A  + +EM   G+ PD   Y++ I      G  + A  +   M  S 
Sbjct: 821 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 880

Query: 401 AKPNSFIYSRILAG 414
            +PN   Y  +L+G
Sbjct: 881 VQPNWDTYRALLSG 894


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 223/481 (46%), Gaps = 25/481 (5%)

Query: 166 YSILIHALG-RSEKLYEAFLLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS+L+ A G R +      LL + +    R    +Y   I    +   LE+A  ++ KM 
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G   D +  +++IQ L    ++  +  + ++ +++    + D      ++     +GD
Sbjct: 269 EEGCKPDVVTNTVLIQILCDAGRLADA--KDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           +          +  G +    +Y A + AL   GR  EA  VF+E+K+ G+ P+  +YN+
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G++K      A  + + M   G  P+ +T+ L I+ +  +G    A   LK  E+  
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKA---LKRYELMK 443

Query: 401 AK---PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +K   P+    + +L G    G      +V  E+K+ G+ PD   Y +MI    K +   
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            AM  F  M+     PD +  N+LID  +K GR + A ++F E++E    P   TYN ++
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             LG + + ++V +LL  M +    PN++TY T++D             C  G  + A++
Sbjct: 564 AGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCL-----------CKNGEVNYALD 612

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M  +G  P   + N+++    ++ R  EAF +   MK+  L PD  T  T++ + +
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYATVCTILPSFV 671

Query: 638 R 638
           R
Sbjct: 672 R 672



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 245/574 (42%), Gaps = 64/574 (11%)

Query: 128  LWHSLLKNLCSS-----NSSIDLAYAVV----SW-----LQKHNLCYSYELLYSILIHAL 173
            ++  +++N C+      NS ID+ Y       +W     L++ NL    +  Y+ L+  L
Sbjct: 508  IFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL-EPTDCTYNTLLAGL 566

Query: 174  GRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            GR  K+ E   L +        P  +TYN ++    +N ++  AL+++  M  +G   D 
Sbjct: 567  GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626

Query: 229  INYSLVIQSLTRTNKID-----------------------------SSLLQKLYKEIECD 259
             +Y+ V+  L +  ++D                             S L+++    +   
Sbjct: 627  SSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREY 686

Query: 260  KIELDGQL----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
             ++ D ++    ++ ++ G  K     K++ F       GL       + +I        
Sbjct: 687  ILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKE 746

Query: 316  TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             + A  + ++ +  G+  +T +YNAL+ G V    +  AE + SEM+R G  PDE TY L
Sbjct: 747  ALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHL 806

Query: 376  LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            ++DA   + R E    + +EM     K     Y+ I++G            +  ++ S G
Sbjct: 807  ILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEG 866

Query: 436  VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
              P    Y  ++D   K   +  A A FD ML  G EP+   +N L++ +   G  ++  
Sbjct: 867  FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVC 926

Query: 496  ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            ELFE M E+G  P   +Y ++I+ L    R  D       +   GL P+++TY  L+   
Sbjct: 927  ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986

Query: 556  GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            G+SGR ++A+           + +  M   G+ P+    NSLI   G+  + AEA  + +
Sbjct: 987  GKSGRLEEAL-----------SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035

Query: 616  YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             +   G KP+V TY  L++           F++Y
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAY 1069



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/467 (23%), Positives = 213/467 (45%), Gaps = 19/467 (4%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL 252
           TY+ L+ A  +  D E  + L+ +M   G   +  +Y++ I+ L +  +++ +  +L+K+
Sbjct: 208 TYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKM 267

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +E  C    +   +L  ++    +  DA     F  M +     P   TY  ++    +
Sbjct: 268 EEE-GCKPDVVTNTVLIQILCDAGRLADAKDV--FWKM-KASDQKPDRVTYITLLDKCGD 323

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           SG +     ++  LK  G      +Y A +    ++G + +A  V  EM++ G++P +++
Sbjct: 324 SGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYS 383

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ LI  +  A R+  A  +   M +    PN + +   +  +   GE  +  +  + MK
Sbjct: 384 YNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMK 443

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S G+ PD    N ++    K   L  A   F  + + GI PD IT+  +I C  K    D
Sbjct: 444 SKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNAD 503

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ++F EM E    P     N +I++L +  R  +  ++   ++   L P   TY TL+
Sbjct: 504 EAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLL 563

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
              G+ G+  + ++ LEG           M ++   P+ +  N++++   ++     A  
Sbjct: 564 AGLGREGKVKEVMQLLEG-----------MNSNSFPPNIITYNTVLDCLCKNGEVNYALD 612

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLS 659
           +L  M  NG  PD+ +Y T+M  L++  +  + F  ++F  + K+L+
Sbjct: 613 MLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAF--WMFCQMKKVLA 657



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 208/480 (43%), Gaps = 15/480 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           L+ A GR   + + F L QRQ  +    T+  +  A      L  A   +  M++ G   
Sbjct: 110 LMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVL 169

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           +   Y+ +I  L ++   D   +  +YK +  D +    +  + +++ F K  DA   + 
Sbjct: 170 NAYTYNGLIYFLVKSG-FDREAMD-VYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVG 227

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            LG  +  G+ P   +Y   I  L  +GR  EA  +  +++E G KP       L++   
Sbjct: 228 LLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILC 287

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G L DA+ V  +M+ S   PD  TY  L+D   ++G   S   +   ++      N  
Sbjct: 288 DAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVV 347

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+  +      G       V  EMK  G+ P  + YN +I  F K +  + A+  F+ M
Sbjct: 348 SYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM 407

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G  P+  T    I+ H K G   +A + +E M+ +G  P     N ++  L +  R 
Sbjct: 408 NIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRL 467

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
              KR+   ++A G+ P+ +TYT ++    ++             +D+A+  F  M  + 
Sbjct: 468 GMAKRVFHELKAMGISPDNITYTMMIKCCSKASN-----------ADEAMKIFAEMIENR 516

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P  LA+NSLI+   +  R  EA+ +   +KE  L+P   TY TL+  L R  K  +V 
Sbjct: 517 CAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVM 576



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 157/359 (43%), Gaps = 12/359 (3%)

Query: 276 AKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           A A D  +A+  FL +A+   +   T +   ++  +   GR  +   VF+ ++   +K  
Sbjct: 76  AAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKAN 135

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              +  +       G L+ A   +  M+ +G++ + +TY+ LI     +G    A  V K
Sbjct: 136 VGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYK 195

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M      P    YS ++  +  R + +    +L EM++ GV P+ + Y + I   G+  
Sbjct: 196 AMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAG 255

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A     +M  EG +PD +T   LI      GR   A+++F +M+     P   TY 
Sbjct: 256 RLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYI 315

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            +++  G+      V  +   ++A G   NVV+YT  VD   Q GR D+A++        
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALD-------- 367

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               F  M+  G+ P   + NSLI+ F +  R   A  +  +M  +G  P+  T+   +
Sbjct: 368 ---VFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFI 423



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 37/357 (10%)

Query: 195  TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            +YNALI      D ++ A  L S+M++ G   D   Y L++ ++ ++ +I+         
Sbjct: 768  SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE--------- 818

Query: 255  EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                D +++  ++ N                         G      TY  +I+ L  S 
Sbjct: 819  ----DMLKIQEEMHNK------------------------GYKSTYVTYNTIISGLVKSK 850

Query: 315  RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               EA  ++ +L   G  P    Y  LL G +K G ++DAE +  EM   G  P+   Y+
Sbjct: 851  MLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYN 910

Query: 375  LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +L++ Y  AG  E    + + M      P+   Y+ ++      G         K++   
Sbjct: 911  ILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM 970

Query: 435  GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            G+EPD   YN++I   GK   L  A++ ++ M  +GI P+  T+N+LI    K G+   A
Sbjct: 971  GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEA 1030

Query: 495  EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             +++EE+  +G+ P   TYN +I         E+     G M   G  PN  TY  L
Sbjct: 1031 GKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 15/356 (4%)

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPR----TKAYNALLKGYVKMGYLKDAEFVVS 359
           A  +  +  S    + E   E       +PR    T++ N +L+     G + D   V  
Sbjct: 66  AGNVVHMLRSAAAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFD 125

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M+R  +  +  T+  +  A    G   SA + L  M+ +    N++ Y+ ++      G
Sbjct: 126 LMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSG 185

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +    V K M + GV P    Y+V++  FGK       +     M + G+ P+  ++ 
Sbjct: 186 FDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYT 245

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
             I    + GR + A  +  +M+E G  P   T  ++I +L +  R  D K +   M+A 
Sbjct: 246 ICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKAS 305

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
              P+ VTY TL+D  G SG            S      +  ++ DG   + ++  + ++
Sbjct: 306 DQKPDRVTYITLLDKCGDSGD-----------SRSVSEIWNALKADGYNDNVVSYTAAVD 354

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
           A  +  R  EA  V   MK+ G+ P   +Y +L+   ++ D+F++    +   NI+
Sbjct: 355 ALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIH 410


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 208/417 (49%), Gaps = 19/417 (4%)

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +A ++ + +  +G+    I Y+ ++ +LTR  K+  S+L +L  ++E + ++ D  L N 
Sbjct: 31  EAHSIFNSLMDEGHKPTLITYTTLVAALTR-QKLFKSIL-RLISKVEENGMKPDSILFNS 88

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I  F+++G+  +AM+     +  G  P T+T+  +I    N+G+T EA  + E L++ G
Sbjct: 89  IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG 148

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           +KP  + YN L++ +     +++A  +V +M  SG+ PD  TY+ L  AYA  G    A 
Sbjct: 149 VKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAE 208

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            ++ EM      PN    S I+ GY   G      + +  MK  GV P+   +N +I  F
Sbjct: 209 EMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGF 268

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                          M   G+ PD +T++T+++     GR D+ +E+F +M +    P  
Sbjct: 269 LDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDI 328

Query: 511 TTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
             ++I+       GE E+ E +   L +MR  G+ PNVV  TT++  +  +G+ + A++ 
Sbjct: 329 HAFSILAKGYVRAGEPEKAESI---LTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKV 385

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
            E + +            G+ P+     +LI  +GE ++  +A  +LQ M+E G+ P
Sbjct: 386 YEKMCEI-----------GVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFP 431



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 203/415 (48%), Gaps = 7/415 (1%)

Query: 165 LYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQD 222
           L ++LI   G+  + +  F  L+ +  + T +TY  L++A  R    +  L L+SK+ ++
Sbjct: 19  LMNVLIGK-GKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEEN 77

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   D I ++ +I + + +  +  ++  KL+++++    +      N +I G+  AG   
Sbjct: 78  GMKPDSILFNSIINAFSESGNMKEAM--KLFRKMKESGCKPTTSTFNTLIKGYGNAGKTE 135

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A++ L   Q  G+ P   TY  ++ A  N     EA  +  ++  SG++P    YN L 
Sbjct: 136 EALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLA 195

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHA 401
           + Y + G    AE ++ EM    V P+E T S++++ Y   G   +++R V +  E+   
Sbjct: 196 RAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELG-V 254

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN F+++ ++ G+ D  + +   +VL  M+ +GV PD   ++ +++ +     +     
Sbjct: 255 LPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKE 314

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F+ M+   IEPD   ++ L   + + G  ++AE +   M++ G  P       +I+   
Sbjct: 315 IFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWC 374

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
              + E   ++   M   G+ PN+ TY TL+  YG++ +   A E L+ + ++ V
Sbjct: 375 SAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGV 429



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 173/342 (50%), Gaps = 11/342 (3%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G+  EA ++F  L + G KP    Y  L+    +    K    ++S++E +G
Sbjct: 19  LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD   ++ +I+A++ +G  + A  + ++M+ S  KP +  ++ ++ GY + G+ +   
Sbjct: 79  MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L+ ++  GV+P+   YN+++  +     +  A     +M++ G++PD +T+NTL   +
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G   RAEE+  EM  R   P   T +I++N   ++    D  R +  M+  G+LPN+
Sbjct: 199 AEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNL 258

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
             + +L+        F D ++  EG+ +       +M  +G++P  +  ++++NA+    
Sbjct: 259 FVFNSLIK------GFLDTMDT-EGVDE----VLTLMEENGVRPDVVTFSTIMNAWSSAG 307

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           R  +   +   M +  ++PD+  ++ L K  +R  +  K  S
Sbjct: 308 RMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAES 349



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G+   A  +F  + + G+ P   TY  ++  L  Q+ ++ + RL+  +   G+ P+ + +
Sbjct: 27  GKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILF 86

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            ++++ + +SG   +A++            FR M+  G KP+    N+LI  +G   +  
Sbjct: 87  NSIINAFSESGNMKEAMK-----------LFRKMKESGCKPTTSTFNTLIKGYGNAGKTE 135

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLS 659
           EA  +L+++++ G+KP+  TY  L++A    +   + ++      +YKM++
Sbjct: 136 EALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNM-----VYKMVA 181


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N VI GF   G    A+  +  M +  G++P   TYA +I+     GR  +A  VF+E+ 
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEML 210

Query: 328 ESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
             G + P    YNAL+ GY  +G L  A     +M + G+     TY+LL+ A     R 
Sbjct: 211 TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARA 270

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  VL+EM+ +   P+ F Y+ ++ GY   G  ++  +V +EM   GV      Y  +
Sbjct: 271 SDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSL 330

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I  F +   +      F+  + +GI PD + +N LI+ H   G  +RA E+  EM+++  
Sbjct: 331 IYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRI 390

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++       R ++ + L+  M  +G+ P++V+Y TL+  Y   G   DA+ 
Sbjct: 391 PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALR 450

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             + + D+           G  P+ +  N+LI    + ++  +A  +++ M   G+ PD 
Sbjct: 451 VRDEMMDK-----------GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDD 499

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 500 STYISLIEGLTTEDE 514



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 219/458 (47%), Gaps = 11/458 (2%)

Query: 99  SASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL 158
           +ASA A   ++  R+  +L      +P    H LL +L S+      A+A+ + + +  L
Sbjct: 58  TASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAP-----AFALFADIYRLRL 112

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISA-CARNDDLEKALNLMS 217
                    +L H     + +    LL Q  R   +TYN +I+  CAR   ++ AL +M 
Sbjct: 113 PLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGR-VQAALEVMR 171

Query: 218 KMRQ-DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD-KIELDGQLLNDVIVGF 275
           +MR+  G   D   Y+ +I    +  +++ ++  K++ E+    ++     + N +I G+
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAV--KVFDEMLTKGEVAPSAVMYNALIGGY 229

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
              G    A+++       G++   ATY  ++ AL    R  +A AV EE++++G  P  
Sbjct: 230 CDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ GY K G  K A  V  EM + GV     TY+ LI  ++  G+ +    +   
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
                 +P+  +Y+ ++  +   G+ +R ++++ EM+   + PD   YN ++  F     
Sbjct: 350 AVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGR 409

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A    D M   GI+PD +++NTLI  +   G    A  + +EM ++G+ P   TYN 
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           +I  L +  + +D + L+  M A+G+ P+  TY +L++
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIE 507



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 7/254 (2%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++L+HAL    R+   Y      Q+   +P   TYN LI+   +  + +KAL +  +M 
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G     + Y+ +I   +R  ++  +   +L+       I  D  + N +I      GD
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQET--DRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +   +   + P   TY  ++      GR  EA  + +E+ + G++P   +YN 
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT 434

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  V  EM   G  P   TY+ LI       + + A  ++KEM    
Sbjct: 435 LISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKG 494

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 495 ITPDDSTYISLIEG 508



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 69/186 (37%), Gaps = 65/186 (34%)

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
           CTTT+NIM+  L    +      LL  M      PN VTY T++  +   GR   A+E  
Sbjct: 115 CTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVM 170

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDG-LKPSNLALNSLINAFG 602
                                  C  G  + AV  F  M T G + PS +  N+LI  + 
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230

Query: 603 E-----------------------------------DQRDAEAFAVLQYMKENGLKPDVV 627
           +                                   D R ++A+AVL+ M++NG  PDV 
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290

Query: 628 TYTTLM 633
           TY  L+
Sbjct: 291 TYNILI 296


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 199/420 (47%), Gaps = 13/420 (3%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           E  L L+ +M+  G   +   Y+ VI  L +T K+  +  +++ +E+  + I  DG +  
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEA--ERVLREMISEGIAPDGVIYT 262

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I GF K G+ S A R     Q   +SP   TY AVI  L  +GR +EA+ +F E+   
Sbjct: 263 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            L+P    Y AL+ GY K G +K+A  + ++M + G+ P+  TY+ L D     G  ++A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L EM     + N + Y+ ++ G    G   +  +++K+M+ +G  PD   Y  ++D 
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K   +  A     +ML   ++P  +T+N L++     G  +  E+L + M E+G  P 
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            TTYN +I     +        +   M A+G++P+  TY  L+  + ++           
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM-------- 554

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
               +A    R M   G   +  + N+LI  F + ++  EA  + + M+  GL  D   Y
Sbjct: 555 ---KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 10/385 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + Y  LI    +  ++  A  L  +M++     DFI Y+ VI  L +T ++  +   KL+
Sbjct: 259 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA--DKLF 316

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+ C ++E D      +I G+ K G   +A         +GL+P   TY A+   L   
Sbjct: 317 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 376

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +  E+   GL+     YN+L+ G  K G +  A  ++ +ME +G  PD  TY
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+DAY  +     A  +L++M     +P    ++ ++ G+   G  +   ++LK M  
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN +I  +   N +      +  M ++G+ PD  T+N LI  H K      
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L  +M  +G+    ++YN +I    +++++ + + L   MR +GL+ +   Y    D
Sbjct: 557 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616

Query: 554 IYGQSGRF-------DDAIE-CLEG 570
           I    G+        D+AIE CL G
Sbjct: 617 INYDEGKMELTLELCDEAIEKCLVG 641



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 11/368 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           L++ + G   A      ++ +   Q  GL P   TY  VI  L  +G+  EAE V  E+ 
Sbjct: 191 LSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 250

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
             G+ P    Y  L+ G+ K+G +  A  +  EM++  + PD  TY+ +I      GR  
Sbjct: 251 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 310

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +  EM     +P+   Y+ ++ GY   G+ +  F +  +M   G+ P+   Y  + 
Sbjct: 311 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 370

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K   +  A      M  +G+E +  T+N+L++   K G  D+A +L ++M+  G+ 
Sbjct: 371 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TY  +++   +         LL  M  + L P VVT+  L++ +  SG  +D  + 
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+ + ++           G+ P+    NSLI  +           + + M   G+ PD  
Sbjct: 491 LKWMLEK-----------GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539

Query: 628 TYTTLMKA 635
           TY  L+K 
Sbjct: 540 TYNILIKG 547



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 13/221 (5%)

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           +GEW    ++++EM+  G++P+ + YN +I    K   +  A      M+SEGI PD + 
Sbjct: 203 KGEW--VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 260

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + TLID   K G    A  LF+EMQ+R   P   TY  +I  L +  R  +  +L   M 
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            + L P+ VTYT L+D Y           C EG   +A +    M   GL P+ +   +L
Sbjct: 321 CKRLEPDEVTYTALIDGY-----------CKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 369

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +   +      A  +L  M   GL+ ++ TY +L+  L +
Sbjct: 370 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 410



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 18/204 (8%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +   + M  +G++P+  T+N +I    K G+   AE +  EM   G  P    Y  +I+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +        RL   M+ + + P+ +TYT ++    Q+GR  +A +            
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK-----------L 315

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M    L+P  +   +LI+ + ++ +  EAF++   M + GL P++VTYT L   L +
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375

Query: 639 VDK-------FHKVFSSYLFFNIY 655
             +        H++    L  NIY
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIY 399


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 203/419 (48%), Gaps = 14/419 (3%)

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +A  + + + ++G+    I Y+ ++ +LTR  +  S  +  L  ++  + ++ D  LLN 
Sbjct: 40  EAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKS--IPALLSKVADNGMKPDSILLNA 97

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KES 329
           +I  F+++G   +AM+     +  G  P T+TY  +I     +GR  E+  + E + ++ 
Sbjct: 98  MINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDE 157

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
            +KP  + YN L++ +     L++A  V+ +M  SG+ PD  TY+ +  AYA  G  E A
Sbjct: 158 NVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERA 217

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             ++ +M  +  KPN      I++GY   G      + L  MK  GV+P+   +N +I  
Sbjct: 218 ERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKG 277

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           +      +    A   M   GI+PD +T++T+++     G  +  EE+F +M + G  P 
Sbjct: 278 YLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPD 337

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Y+I+        +    + LL +M   G+ PNVV +TT++  +  +G+ D A    E
Sbjct: 338 IHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCE 397

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
            + +            G  P+     +LI  +GE ++  +A  +L  M+E G+ P++ T
Sbjct: 398 KMHEM-----------GTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMST 445



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 204/442 (46%), Gaps = 13/442 (2%)

Query: 145 LAYAVVSW----LQKHNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLT 195
           + Y  +S+    L+ +N C +      ++   +G+  K +EA      L  +  + T +T
Sbjct: 1   MEYVTISFSTAKLRGNNSCQTVHARTKLMNTLIGKG-KPHEAQAVFNNLTEEGHKPTLIT 59

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  L++A  R    +    L+SK+  +G   D I  + +I + + + K+D ++  K++++
Sbjct: 60  YTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAM--KIFQK 117

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM-AQGVGLSPKTATYAAVITALSNSG 314
           ++    +      N +I GF  AG   ++M+ L M  Q   + P   TY  +I A     
Sbjct: 118 MKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKK 177

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  V  ++  SG++P    YN + + Y + G  + AE ++ +M  + V P+E T  
Sbjct: 178 KLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCG 237

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           ++I  Y   G    A   L  M+     PN  +++ ++ GY D  +     + L  M+  
Sbjct: 238 IIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEF 297

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++PD   ++ +++ +     + +    F+ M+  GIEPD   ++ L   + + G+  +A
Sbjct: 298 GIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKA 357

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E L   M + G  P    +  +I+      + +   RL   M   G  PN+ TY TL+  
Sbjct: 358 EALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWG 417

Query: 555 YGQSGRFDDAIECLEGLSDQAV 576
           YG++ +   A E L  + ++ V
Sbjct: 418 YGEAKQPWKAEELLTTMEERGV 439



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/398 (22%), Positives = 182/398 (45%), Gaps = 44/398 (11%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P  +  + + N  S +  +D A  +   ++++  C      Y+ LI   G + + YE+  
Sbjct: 90  PDSILLNAMINAFSESGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIAGRPYESMK 148

Query: 184 ---LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              ++ Q + + P   TYN LI A      LE+A N++ KM   G   D + Y+ + ++ 
Sbjct: 149 LLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAY 208

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  + + +  ++L  ++  + ++ + +    +I G+ K G+  +A+RFL   + +G+ P
Sbjct: 209 AQNGETERA--ERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDP 266

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               + ++I    ++  T   +     ++E G+KP    ++ ++  +   G +++ E + 
Sbjct: 267 NPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIF 326

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           ++M ++G+ PD H YS+L   Y  AG+   A  +L  M     +PN  I++ I++G+   
Sbjct: 327 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAA 386

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+  R F++ ++M   G  P+   Y  +I  +G                 E  +P    W
Sbjct: 387 GKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYG-----------------EAKQP----W 425

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
                         +AEEL   M+ERG  P  +T  ++
Sbjct: 426 --------------KAEELLTTMEERGVVPEMSTMQLV 449



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 168/366 (45%), Gaps = 25/366 (6%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G+  EA+AVF  L E G KP    Y  L+    +    K    ++S++  +G
Sbjct: 28  LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD    + +I+A++ +G+ + A  + ++M+    KP +  Y+ ++ G+   G    + 
Sbjct: 88  MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESM 147

Query: 426 QVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+ M +   V+P+   YN++I  +     L  A     +M++ GI+PD +T+NT+   
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + + G  +RAE L  +M      P   T  I+I+   ++    +  R L  M+  G+ PN
Sbjct: 208 YAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPN 267

Query: 545 VVTYTTLVDIY---GQSGRFDDAIECLE---------------------GLSDQAVNAFR 580
            V + +L+  Y     +   D+A+  +E                     GL +     F 
Sbjct: 268 PVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFN 327

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G++P   A + L   +    +  +A A+L  M + G++P+VV +TT++       
Sbjct: 328 DMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAG 387

Query: 641 KFHKVF 646
           K  + F
Sbjct: 388 KMDRAF 393



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 25/290 (8%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           H  + L++     G+   A+ V   +     KP    Y+ ++A    +  ++    +L +
Sbjct: 23  HARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSK 82

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +  +G++PD+   N MI+ F +   +  AM  F +M   G +P T T+NTLI      GR
Sbjct: 83  VADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGR 142

Query: 491 YDRAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
              + +L E M Q+    P   TYNI+I     +++ E+   +L  M A G+ P+VVTY 
Sbjct: 143 PYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYN 202

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
           T+   Y Q+G  + A                          C EG   +A+     M+  
Sbjct: 203 TMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKEL 262

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           G+ P+ +  NSLI  + +          L  M+E G+KPDVVT++T+M A
Sbjct: 263 GVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNA 312



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 15/142 (10%)

Query: 498 FEEMQERGYFPCTTTY---NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           F   + RG   C T +    +M  L+G+ +  E  + +  N+  +G  P ++TYTTLV  
Sbjct: 8   FSTAKLRGNNSCQTVHARTKLMNTLIGKGKPHE-AQAVFNNLTEEGHKPTLITYTTLVAA 66

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +  RF      L  ++D           +G+KP ++ LN++INAF E  +  EA  + 
Sbjct: 67  LTRQKRFKSIPALLSKVAD-----------NGMKPDSILLNAMINAFSESGKVDEAMKIF 115

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
           Q MKE G KP   TY TL+K  
Sbjct: 116 QKMKEYGCKPTTSTYNTLIKGF 137



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/192 (19%), Positives = 80/192 (41%), Gaps = 4/192 (2%)

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           EA  L +   + P  +T++ +++A +    +E    + + M + G   D   YS++ +  
Sbjct: 289 EALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGY 348

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            R  +   +  + L   +    ++ +  +   +I G+  AG   +A R       +G SP
Sbjct: 349 VRAGQPRKA--EALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSP 406

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I     + +  +AE +   ++E G+ P       +   +  +G  K+A  ++
Sbjct: 407 NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466

Query: 359 SEMERSGVLPDE 370
           +  E    L  E
Sbjct: 467 NGSEEESELDQE 478


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 228/518 (44%), Gaps = 27/518 (5%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDL 209
           KH+  Y    +Y++LI  L + +++ +A  L      +RL P  +TYN LI    +  + 
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           EK+  +  +M+ D      I ++ +++ L +   ++ +  + + KE++      D    +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA--ENVLKEMKDLGFVPDAFTFS 323

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +  G++    A  A+     A   G+     T + ++ AL   G+  +AE +       
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P    YN ++ GY + G L  A   +  ME+ G+ PD   Y+ LI  +   G  E+A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
              + +M++    P+   Y+ ++ GY  + E+ + F +LKEM+ +G  P+   Y  +I+ 
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K + L  A      M   G+ P    +N LID     G+ + A    +EM ++G    
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +I+ L    +  + + LL  +  +GL P+V TY +L+  YG +G     I   E
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623

Query: 570 GLSDQAVNAF--------------------RVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            +    +                       R+     LKP  L  N +++ +       +
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           AF + + M E  +  D  TY +L+   ++V K  +V S
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 127/514 (24%), Positives = 232/514 (45%), Gaps = 31/514 (6%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISAC 203
           A+++ S   KH+  Y   LL S+L++      +  + F   + + + P +     L+   
Sbjct: 98  AFSLSSPSLKHDFSY---LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +       +N+   + +  +      Y   IQ+  + + +   L  +L+  ++ D+I  
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL--ELFNRMKHDRIYP 212

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
              + N +I G  K    + A +         L P   TY  +I     +G   ++  V 
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E +K   ++P    +N LLKG  K G ++DAE V+ EM+  G +PD  T+S+L D Y++ 
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            + E+A  V +    S  K N++  S +L      G+ ++  ++L    + G+ P+   Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N MID + +   L  A    + M  +G++PD + +N LI    + G  + AE+   +M+ 
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +G  P   TYNI+I   G +  ++    +L  M   G +PNVV+Y TL++   +  +  +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 564 AIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSLIN 599
           A      + D+ V                     +AFR    M   G++ + +  N+LI+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                 + +EA  +L  +   GLKPDV TY +L+
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 6/347 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R  + +K  +++ +M  +G   + ++Y  +I  L + +K+  +  Q + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA--QIVKR 518

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++E   +    ++ N +I G    G    A RF       G+     TY  +I  LS +G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EAE +  E+   GLKP    YN+L+ GY   G ++    +  EM+RSG+ P   TY 
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           LLI      G   + R+   EM +   KP+  +Y+ +L  Y   G+ ++ F + K+M   
Sbjct: 639 LLISLCTKEGIELTERL-FGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            +  D   YN +I    K   L    +  D M +  +EP+  T+N ++  H +   Y  A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
              + EMQE+G+       N +++ L E+ R ++ + ++  M  + L
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801


>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 903

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 224/536 (41%), Gaps = 67/536 (12%)

Query: 170 IHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQD-G 223
           + A G++ ++ EA  L +  R     L  ++YN  I AC    D E AL+++ +M  + G
Sbjct: 166 LDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYG 225

Query: 224 YHCDFINYSLVIQSLTRTNKID--SSLL-----------QKLYKEI-----ECDKIELDG 265
              + I Y   I+   R  K D  +SLL             +Y  +       D  +   
Sbjct: 226 IKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAA 285

Query: 266 QLLNDV---------------IVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAVITA 309
             L ++               I      G+  +A+  L   + VG + P   TY  V+ A
Sbjct: 286 STLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAA 345

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              +G+  +A  +F E+ E G+KP   ++   +      G  ++A  +  EMER+GV P+
Sbjct: 346 CGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPN 405

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAK----------------PNSFIYSRILA 413
             T++ ++ A   AG+WE A     E+                       ++  Y+  L+
Sbjct: 406 IITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALS 465

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                 +W R   +L++M   GV+P    YN +I   GK      A+A    M   G+ P
Sbjct: 466 ACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMP 525

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D IT+N+ I      GR D A  L  EM   G      TY+  +  L    RWE    LL
Sbjct: 526 DVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLL 585

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M+  G+ P V+ YT  +   G++G+ D+A+  L           R M T G+ P+  +
Sbjct: 586 REMQGAGVSPTVICYTAAIRACGEAGKGDEALLLL-----------REMPTAGVTPNLFS 634

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            ++ I+A G+D R  +  A+L  M   GL P+   YT  +       ++ +  +++
Sbjct: 635 YSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATF 690



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 5/369 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YN +ISAC +  + ++AL L+ +M + G   D I ++  I +L+ + + D ++  +L 
Sbjct: 493 ISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAV--RLM 550

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    +  D    +  + G A AG   +A+  L   QG G+SP    Y A I A   +
Sbjct: 551 REMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEA 610

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  +  E+  +G+ P   +Y+A +    K G  +    +++EM   G+ P+E  Y
Sbjct: 611 GKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCY 670

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           +  I      G+WE A    + M  S  +P    Y+  ++     GE     ++L EMK 
Sbjct: 671 TAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKE 730

Query: 434 -SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR-MLSEGIEPDTITWNTLIDCHFKCGRY 491
            +G+EP+   Y  +I   G      H +A   R M S GI P    + + I    +CG +
Sbjct: 731 EAGIEPNEQTYAAVILACGNGG-QGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNW 789

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  L  EM+  G  P  + YN  I   G+  +W++   LL  M  +GL+ +  T +  
Sbjct: 790 SEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAA 849

Query: 552 VDIYGQSGR 560
           +    ++GR
Sbjct: 850 ISACQKAGR 858



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 221/539 (41%), Gaps = 70/539 (12%)

Query: 164 LLYSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           + Y+I++ A G++   EK  E F       + P  +++   ISAC      E+AL++  +
Sbjct: 337 VTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFRE 396

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI---------------------- 256
           M + G   + I ++ V+ +     + + +L    + E+                      
Sbjct: 397 MERAGVRPNIITHNAVMSACIAAGQWEEAL--DFFTEVVDGSGAANGGGGGGPPPDPVEV 454

Query: 257 -----------ECDKIELDGQLL------------------NDVIVGFAKAGDASKAMRF 287
                       C+  E  G+ L                  N VI    K G+  +A+  
Sbjct: 455 ADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALAL 514

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           L      GL P   T+ + I ALSNSGR  +A  +  E+  +G+      Y++ L G   
Sbjct: 515 LREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAH 574

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G  + A  ++ EM+ +GV P    Y+  I A   AG+ + A ++L+EM  +   PN F 
Sbjct: 575 AGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFS 634

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           YS  ++     G W++   +L EM + G+ P+   Y   I   G       A+A F  M+
Sbjct: 635 YSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMI 694

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER-GYFPCTTTYNIMINLLGEQERW 526
           + GI+P  + + + +     CG  D A EL  EM+E  G  P   TY  +I   G   + 
Sbjct: 695 ASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQG 754

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
             V ++  +M + G+ P +  Y + +   G+ G + +A   L             M   G
Sbjct: 755 HLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLG-----------EMEAAG 803

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           + P+    N+ I A G+  +  EA  +L  M   GL  D  T +  + A  +  +  K 
Sbjct: 804 VPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGVKA 862



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 210/506 (41%), Gaps = 69/506 (13%)

Query: 164 LLYSILIHALGRSEKLYEAF-LLSQRQRLT--PLTY--NALISACARNDDLEKALNLMSK 218
            +YS  I  + +  +  EA  +L++   L   P +Y  NA + AC +   +++AL LM  
Sbjct: 125 FVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMRD 184

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            R  G   D ++Y+  I +       D  L   + +E+E +                   
Sbjct: 185 ARASGIELDVVSYNCAIPACVTGG--DWELALSMIREMEAE------------------- 223

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                           G+ P   TY A I      G+  EA ++  E+K+ G+  +T  Y
Sbjct: 224 ---------------YGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVY 268

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-E 397
           +A+   + ++ + + A   + E+    V P+   Y+L I    + G WE A  +L  M E
Sbjct: 269 SAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMRE 328

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V   +P+   Y+ ++A     G+ ++  ++ +EM   G++PD   +   I   G      
Sbjct: 329 VGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSE 388

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC-------- 509
            A++ F  M   G+ P+ IT N ++      G+++ A + F E+ +              
Sbjct: 389 EALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPP 448

Query: 510 --------TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
                     +YN  ++     E+W     LL +M  +G+ P V++Y T++   G+    
Sbjct: 449 PDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGK---- 504

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C EG  DQA+   R M   GL P  +  NS I A     R  +A  +++ M   G
Sbjct: 505 -----CGEG--DQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRAG 557

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFS 647
           +  D +TY++ +  L    ++ +  S
Sbjct: 558 VAADAITYSSALTGLAHAGRWEQALS 583



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 138/311 (44%), Gaps = 3/311 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY++ ++  A     E+AL+L+ +M+  G     I Y+  I++     K D +LL  L 
Sbjct: 563 ITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALL--LL 620

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    +  +    +  I    K G   + +  L     +GL+P    Y A IT     
Sbjct: 621 REMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIG 680

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-ERSGVLPDEHT 372
           G+   A A F  +  SG++P    Y + +      G +  A  ++SEM E +G+ P+E T
Sbjct: 681 GQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQT 740

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ +I A  N G+      V ++M  +   P    Y   +    + G W     +L EM+
Sbjct: 741 YAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEME 800

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           ++GV P    YN  I   GK      A+   D M  +G+  D+ T +  I    K GR  
Sbjct: 801 AAGVPPTVSCYNAAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGV 860

Query: 493 RAEELFEEMQE 503
           +A  L EEM E
Sbjct: 861 KAAGLVEEMLE 871



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 13/303 (4%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           T  Y+  I+ ++   R  EA  +   + E G  P +   NA L    K G +++A  ++ 
Sbjct: 124 TFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKAGRVQEALGLMR 183

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDR 418
           +   SG+  D  +Y+  I A    G WE A  +++EME  +  KPN   Y   +      
Sbjct: 184 DARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRC 243

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+      +L EMK  GV   T  Y+ + + F + +    A +    +    ++P+   +
Sbjct: 244 GKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNY 303

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYF-PCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           N  I     CG ++ A +L   M+E G   P   TYNI++   G+  + E    +   M 
Sbjct: 304 NLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMS 363

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             G+ P+V+++TT +   G             GLS++A++ FR M   G++P+ +  N++
Sbjct: 364 EVGIKPDVISFTTAISACGSC-----------GLSEEALSIFREMERAGVRPNIITHNAV 412

Query: 598 INA 600
           ++A
Sbjct: 413 MSA 415



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 44/280 (15%)

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           D+ E           K+      T  Y+  I    K      A+    RM   G  P++ 
Sbjct: 101 DKAELAEGRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSY 160

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
             N  +D   K GR   A  L  + +  G      +YN  I        WE    ++  M
Sbjct: 161 CVNAALDACGKAGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREM 220

Query: 537 RAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV-----------NAFRVMRT 584
            A+ G+ PN +TY   + + G+ G+ D+A   L  + D  V           NAFR  R 
Sbjct: 221 EAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFR--RV 278

Query: 585 D---------------GLKPS----NLALNSLINAFGEDQRDAEAFAVLQYMKE-NGLKP 624
           D                +KP+    NLA+ +  +  GE +   EA  +L +M+E  G++P
Sbjct: 279 DHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDC-GEWE---EALDLLHFMREVGGVEP 334

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
           DVVTY  ++ A  +  +  K         I++ +S  G K
Sbjct: 335 DVVTYNIVVAACGKAGQGEKA------IEIFREMSEVGIK 368


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 218/488 (44%), Gaps = 39/488 (7%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
           + +  +I+   R   L++A +++ +  + G   D++ Y++ I  L +  ++D +  LL+K
Sbjct: 8   VAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKK 67

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +  E +C    +    L D   G  KAG   +AM  L      G SP   TY  VI  LS
Sbjct: 68  M-DEKKCLPTTVTYTALVD---GLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM----ERSGVL 367
            +GR  EA  +F ++  +G +P    Y AL+KG  K G  ++A  +  E       +  +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQ 426
           PD  TY+ LID    AGR   AR V  +  V     P++  Y+ I+ G    G  +   +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
              EM++ G EPD   Y  +ID F K   +  A   + +ML  G    T+T+N ++D   
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K GR   A   F  M+ERG      TY+ +++    +        L   M  +G  PN+V
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 547 TYTTLVDIYGQSGR-------FDDAIE---C---------LEGLSDQ------AVNAFRV 581
           +Y  ++    ++G+       F+  ++   C         L GL  +       V  F  
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES 423

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---R 638
           M + G  P+  + + L++          A  + + M   G+ PDVV + TL++ L    R
Sbjct: 424 MVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483

Query: 639 VDKFHKVF 646
           VD+  +VF
Sbjct: 484 VDEALEVF 491



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 182/419 (43%), Gaps = 22/419 (5%)

Query: 227 DFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           D + +++VI  L R  ++D   S+L++  +       E D    N  I G  KA     A
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRA----GCEPDYVTYNVFIDGLCKAERVDDA 61

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
            + L         P T TY A++  L  +GR  EA AV E++ E G  P  K Y  ++ G
Sbjct: 62  FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV----SH 400
             K G +++A  +  +M  +G  PD   Y+ LI     +G+ E A  + KE       + 
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHAT 181

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVL-KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           A P+   Y+ ++ G    G      QV   E    G  PD   Y  +ID   K   +   
Sbjct: 182 AVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M + G EPD +T+  LID   K     +A  ++ +M + G    T TYNI+++ 
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +  R  +       M  +G +  VVTY+ L+D +           C EG    AV  F
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF-----------CSEGNVSAAVELF 350

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           R M   G +P+ ++ N +I       + A+A+   + + +  L PDV T+   +  L +
Sbjct: 351 RRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 219/509 (43%), Gaps = 31/509 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           ++  +  LC +   +D A+ ++  + +   C    + Y+ L+  L ++ +L EA      
Sbjct: 45  YNVFIDGLCKAER-VDDAFQLLKKMDEKK-CLPTTVTYTALVDGLLKAGRLDEAMAVLEQ 102

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ +    T  TY  +I   ++   +E+A  +   M  +G   D   Y+ +I+ L ++ K
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGK 162

Query: 244 IDSSLLQKLYKEIECDKIEL----DGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSP 298
            + +    LYKE    K       D      +I G  KAG   +A + F   A   G  P
Sbjct: 163 PEEAY--ALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIP 220

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY ++I  L   GR  E    F E++  G +P    Y AL+ G++K   +  A  V 
Sbjct: 221 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 280

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M +SG +    TY++++D    AGR   A      ME          YS ++ G+   
Sbjct: 281 RQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 340

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G      ++ + M   G EP+   YN++I    +   L  A   F+++L   + PD  T+
Sbjct: 341 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 400

Query: 479 NTLIDCHFKCGRYDRAE---ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           N  +  H  C R D      ELFE M  +G  P   +Y+I+++ +      E    +   
Sbjct: 401 NAFL--HGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFRE 458

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M ++G+ P+VV + TL+     +GR D+A+E    L  ++             P   +  
Sbjct: 459 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA------------PDAWSYW 506

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           SL++     +R  EA  +  +MK  G  P
Sbjct: 507 SLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 16/342 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP    +  VI  L    R  EA +V E    +G +P    YN  + G  K   + DA  
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ +M+    LP   TY+ L+D    AGR + A  VL++M      P    Y+ ++ G  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD----RMLSEGIE 472
             G  +   ++  +M  +G  PD   Y  +I    K      A A +     R       
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELF-EEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           PD +T+ +LID   K GR   A ++F +E  ERG+ P   TY  +I+ L +  R E+   
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
               MR +G  P+ VTY  L+D + ++            +  +A   +R M   G   S 
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKA-----------KMIPKAHRVYRQMLQSGTVVST 292

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +  N +++   +  R AEA+A    M+E G    VVTY+ LM
Sbjct: 293 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 334



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 145/323 (44%), Gaps = 16/323 (4%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   A+  ++ G  +   L +A  V+    R+G  PD  TY++ ID    A R + A  +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           LK+M+     P +  Y+ ++ G    G       VL++M   G  P    Y V+ID   K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY----FP 508
              +  A   F  ML  G  PD   +  LI    K G+ + A  L++E   R +     P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
              TY  +I+ L +  R  + +++  +   + G +P+ VTYT+++D   + GR ++  E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE- 243

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                      F  MR  G +P  +   +LI+ F + +   +A  V + M ++G     V
Sbjct: 244 ----------RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293

Query: 628 TYTTLMKALIRVDKFHKVFSSYL 650
           TY  ++  L +  +  + ++++L
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFL 316



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 13/249 (5%)

Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I++  L ++ ++ EA+   L+  +R    T +TY+AL+       ++  A+ L  +M 
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   + ++Y+++I+ L R  K+  +    +KL +   C     D    N  + G  + 
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP----DVYTFNAFLHGLCQR 410

Query: 279 GD-ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            D  S  +         G SP   +Y+ ++  +  +G    A  +F E+   G+ P    
Sbjct: 411 LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +N L++     G + +A  V  E+ER    PD  +Y  L+D  +   R E AR++   M+
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMK 529

Query: 398 VSHAKPNSF 406
           +    P  +
Sbjct: 530 LQGCAPRHY 538


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 212/435 (48%), Gaps = 13/435 (2%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           LTP TY+  I+A  +++ +E    L++ M + G   DF   ++ +  L   N++  +L  
Sbjct: 228 LTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDAL-- 285

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ +++       D      V+         S+A+         GL P      A+I  L
Sbjct: 286 QMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGL 345

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             + +  EA  +   +    ++     YNAL+ G+ + G ++ A   VS M+R+G  PD 
Sbjct: 346 CKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDV 405

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY++L++ Y + G  + A  ++++ME+S   P+ + Y+ +L G     +  + F  + +
Sbjct: 406 VTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSD 465

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               G   D    N++ID F +   ++ A+  F  M  +GI+ D +T+  LI+  F  G 
Sbjct: 466 HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGY 525

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + AEELF++M      P    YNIM++ L +   ++  +++   M  + + P+ VT+ T
Sbjct: 526 SNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNT 585

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+   G+S R   A+E        A++ F+ MRT G++P NL    +I+   ++ +   A
Sbjct: 586 LIYWLGKSSR---AVE--------ALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLA 634

Query: 611 FAVLQYMKENGLKPD 625
           + + +YM ENG+  D
Sbjct: 635 YEIWEYMMENGIILD 649



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 211/484 (43%), Gaps = 30/484 (6%)

Query: 165 LYSILIHALGRSEK---LYEAF--LLSQRQRLTPLTYNALISACARN---DDLEKALNLM 216
           LY +L+    R+ K   + E F  +++   R   + YN  I    +N   D +EK  N+ 
Sbjct: 162 LYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMA 221

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLLNDVIV 273
                 G+      YS  I +L ++N+I+  L+++L  +++   C        +    + 
Sbjct: 222 ---LAKGFCLTPFTYSRWITALCQSNRIE--LVEELLTDMDKFGCFPDFWACNIYVHYLC 276

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  +  DA + +  + M    G  P   TY  V++ L +  R  EA  ++EE+   GLKP
Sbjct: 277 GHNRLYDALQMVEKMTMK---GTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              A  AL+ G  K   + +A  + S M    +  +   Y+ LI  +  AG  E A   +
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV 393

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M+ +  +P+   Y+ +L  Y   G   +   ++++M+ SGV PD + YN+++    K 
Sbjct: 394 SFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKA 453

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + L  A A     +  G   D ++ N LID   +  + + A  LF+EM  +G      TY
Sbjct: 454 HQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTY 513

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            I+IN L         + L   M    ++PNV  Y  ++    + G F            
Sbjct: 514 GILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFK----------- 562

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A   F  M    + P  +  N+LI   G+  R  EA  + + M+  G++PD +T+  ++
Sbjct: 563 HAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYII 622

Query: 634 KALI 637
             L+
Sbjct: 623 SGLL 626



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 168/436 (38%), Gaps = 40/436 (9%)

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNS 313
           E+E   +ELD  ++N V+ G     D+  A+RF   A+   G        A +I+ L   
Sbjct: 82  ELEGLHVELDPFVVNKVLRGLL---DSGMAVRFYWWAESRPGFYHNNFAIAYIISLLFVD 138

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
                       ++  G+      Y  LL GY + G          EM  SG       Y
Sbjct: 139 DNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDY 198

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKP---NSFIYSRILAGYRDRGEWQRTFQVLKE 430
           +  I        ++   +V K   ++ AK      F YSR +         +   ++L +
Sbjct: 199 NRFIGVMIKNCCFD---LVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  PD    N+ +     +N L+ A+   ++M  +G  PD +T+ T++ C     R
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +  A  L+EEM  RG  P       +I  L + ++ ++   L   M    +  NV  Y  
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
           L+  + ++G  + A +                        C  G++D+A N  R M   G
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + P   + N L+    +  +  +AFA +    E G   D+V+   L+ A  R  K +   
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSA- 494

Query: 647 SSYLFFNIYKMLSYSG 662
                 N++K + Y G
Sbjct: 495 -----LNLFKEMGYKG 505



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 50/325 (15%)

Query: 91  LSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVV 150
           L +N   + A  LAS   +L+ ++  ++  Y A+ +  W +          SI+ AY  V
Sbjct: 345 LCKNQKVDEAFELASRMLTLD-IQLNVS-IYNALISGFWRA---------GSIEKAYKTV 393

Query: 151 SWLQKHNLCYSYELLYSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACAR 205
           S++Q+ N C    + Y+IL++   ++G ++K        +   + P   +YN L+    +
Sbjct: 394 SFMQR-NGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCK 452

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL---LQKLYKEIECDKI- 261
              L+KA   +S   + G  CD ++ +++I +  R  K++S+L    +  YK I+ D + 
Sbjct: 453 AHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVT 512

Query: 262 ------------------ELDGQLLNDVIV-----------GFAKAGDASKAMRFLGMAQ 292
                             EL  Q+LN  IV              K G    A +      
Sbjct: 513 YGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMT 572

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              +SP T T+  +I  L  S R +EA  +F+E++  G++P    +  ++ G +  G   
Sbjct: 573 QKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKAT 632

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLI 377
            A  +   M  +G++ D      LI
Sbjct: 633 LAYEIWEYMMENGIILDRDVSERLI 657


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 212/435 (48%), Gaps = 13/435 (2%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           LTP TY+  I+A  +++ +E    L++ M + G   DF   ++ +  L   N++  +L  
Sbjct: 228 LTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDAL-- 285

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           ++ +++       D      V+         S+A+         GL P      A+I  L
Sbjct: 286 QMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGL 345

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             + +  EA  +   +    ++     YNAL+ G+ + G ++ A   VS M+R+G  PD 
Sbjct: 346 CKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDV 405

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY++L++ Y + G  + A  ++++ME+S   P+ + Y+ +L G     +  + F  + +
Sbjct: 406 VTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSD 465

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
               G   D    N++ID F +   ++ A+  F  M  +GI+ D +T+  LI+  F  G 
Sbjct: 466 HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGY 525

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + AEELF++M      P    YNIM++ L +   ++  +++   M  + + P+ VT+ T
Sbjct: 526 SNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNT 585

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+   G+S R   A+E        A++ F+ MRT G++P NL    +I+   ++ +   A
Sbjct: 586 LIYWLGKSSR---AVE--------ALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLA 634

Query: 611 FAVLQYMKENGLKPD 625
           + + +YM ENG+  D
Sbjct: 635 YEIWEYMMENGIILD 649



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 211/484 (43%), Gaps = 30/484 (6%)

Query: 165 LYSILIHALGRSEK---LYEAF--LLSQRQRLTPLTYNALISACARN---DDLEKALNLM 216
           LY +L+    R+ K   + E F  +++   R   + YN  I    +N   D +EK  N+ 
Sbjct: 162 LYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMA 221

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLLNDVIV 273
                 G+      YS  I +L ++N+I+  L+++L  +++   C        +    + 
Sbjct: 222 ---LAKGFCLTPFTYSRWITALCQSNRIE--LVEELLTDMDKFGCFPDFWACNIYVHYLC 276

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  +  DA + +  + M    G  P   TY  V++ L +  R  EA  ++EE+   GLKP
Sbjct: 277 GHNRLYDALQMVEKMTMK---GTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKP 333

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              A  AL+ G  K   + +A  + S M    +  +   Y+ LI  +  AG  E A   +
Sbjct: 334 DVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTV 393

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             M+ +  +P+   Y+ +L  Y   G   +   ++++M+ SGV PD + YN+++    K 
Sbjct: 394 SFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKA 453

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + L  A A     +  G   D ++ N LID   +  + + A  LF+EM  +G      TY
Sbjct: 454 HQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTY 513

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
            I+IN L         + L   M    ++PNV  Y  ++    + G F            
Sbjct: 514 GILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFK----------- 562

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A   F  M    + P  +  N+LI   G+  R  EA  + + M+  G++PD +T+  ++
Sbjct: 563 HAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYII 622

Query: 634 KALI 637
             L+
Sbjct: 623 SGLL 626



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 169/436 (38%), Gaps = 40/436 (9%)

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNS 313
           E+E   +ELD  ++N V+ G +   D+  A+RF   A+   G        A +I+ L   
Sbjct: 82  ELEGLHVELDPFVVNKVLRGLS---DSGMAVRFYWWAESRPGFYHNNFAIAYIISLLFVD 138

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
                       ++  G+      Y  LL GY + G          EM  SG       Y
Sbjct: 139 DNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDY 198

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKP---NSFIYSRILAGYRDRGEWQRTFQVLKE 430
           +  I        ++   +V K   ++ AK      F YSR +         +   ++L +
Sbjct: 199 NRFIGVMIKNCCFD---LVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTD 255

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M   G  PD    N+ +     +N L+ A+   ++M  +G  PD +T+ T++ C     R
Sbjct: 256 MDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRR 315

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +  A  L+EEM  RG  P       +I  L + ++ ++   L   M    +  NV  Y  
Sbjct: 316 FSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNA 375

Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
           L+  + ++G  + A +                        C  G++D+A N  R M   G
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + P   + N L+    +  +  +AFA +    E G   D+V+   L+ A  R  K +   
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSA- 494

Query: 647 SSYLFFNIYKMLSYSG 662
                 N++K + Y G
Sbjct: 495 -----LNLFKEMGYKG 505



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 50/325 (15%)

Query: 91  LSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVV 150
           L +N   + A  LAS   +L+ ++  ++  Y A+ +  W +          SI+ AY  V
Sbjct: 345 LCKNQKVDEAFELASRMLTLD-IQLNVS-IYNALISGFWRA---------GSIEKAYKTV 393

Query: 151 SWLQKHNLCYSYELLYSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACAR 205
           S++Q+ N C    + Y+IL++   ++G ++K        +   + P   +YN L+    +
Sbjct: 394 SFMQR-NGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCK 452

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL---LQKLYKEIECDKI- 261
              L+KA   +S   + G  CD ++ +++I +  R  K++S+L    +  YK I+ D + 
Sbjct: 453 AHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVT 512

Query: 262 ------------------ELDGQLLNDVIV-----------GFAKAGDASKAMRFLGMAQ 292
                             EL  Q+LN  IV              K G    A +      
Sbjct: 513 YGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMT 572

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              +SP T T+  +I  L  S R +EA  +F+E++  G++P    +  ++ G +  G   
Sbjct: 573 QKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGKAT 632

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLI 377
            A  +   M  +G++ D      LI
Sbjct: 633 LAYEIWEYMMENGIILDRDVSERLI 657


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 224/490 (45%), Gaps = 18/490 (3%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y+ LIHA      + EA    ++ +     ++ +TY+ L+S  A+  + E A +   + 
Sbjct: 348 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEA 407

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           ++     + I Y  +I +  +   +D +  + L +E+E + I+    + + ++ G+   G
Sbjct: 408 KEKHSSLNAIIYGNIIYAYCQRCNMDKA--EALVREMEEEGIDAPIDIYHTMMDGYTMVG 465

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D  K +      +  GL+P   TY  +I   +  G+  +A  V +E++ +G+K   K Y+
Sbjct: 466 DEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYS 525

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G++K+    +A  +  ++ + G+ PD   Y+ +I A+   G+ + A   +KEM+  
Sbjct: 526 MLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQ 585

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KP +  +  I+ G+  +GE ++   V   M+ SG  P  H YN +I    +   +  A
Sbjct: 586 RHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA 645

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               D M   G+ P+  T+ T++  +   G   +A   F ++++ G      TY  ++  
Sbjct: 646 EQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKA 705

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +  R +    +   M AQ +  N   Y  L+D + + G   +A + ++          
Sbjct: 706 CCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQ--------- 756

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+ +G++P      S INA  +      A   ++ MK  G+KP+V TYTTL+    R 
Sbjct: 757 --MKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 814

Query: 640 DKFHKVFSSY 649
               K  S +
Sbjct: 815 SLPEKALSCF 824



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/499 (24%), Positives = 209/499 (41%), Gaps = 66/499 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y ++++   R   ++ A    ++ R   +      Y  LI A A   D+E+AL+ + KM+
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           ++G     + YS+++                                      GFAK G+
Sbjct: 374 EEGIEMSLVTYSILVS-------------------------------------GFAKTGN 396

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           A  A  +   A+    S     Y  +I A        +AEA+  E++E G+      Y+ 
Sbjct: 397 AESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHT 456

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY  +G       V    +  G+ P   TY  LI+ YA  G+   A  V KEME + 
Sbjct: 457 MMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAG 516

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K N   YS ++ G+    +W   F + +++   G++PD   YN +I  F     +  A+
Sbjct: 517 IKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAV 576

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M  +  +P T T+  +I    + G   +A ++F+ M+  G  P   TYN +I  L
Sbjct: 577 CTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGL 636

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY---GQSGRF--------DDAIE--- 566
            E+ + E  +++L  M   G+ PN  TYTT++  Y   G +G+         D+ ++   
Sbjct: 637 VEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDV 696

Query: 567 ----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C  G    A+   + M    +  +    N LI+ +       EA  ++Q 
Sbjct: 697 YTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQ 756

Query: 617 MKENGLKPDVVTYTTLMKA 635
           MK  G++PD+ TYT+ + A
Sbjct: 757 MKREGVQPDIHTYTSFINA 775



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 203/452 (44%), Gaps = 19/452 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y+ ++       D +K L +  + ++ G +   I Y  +I    +  K+  +L  ++ KE
Sbjct: 454 YHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKAL--EVSKE 511

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E   I+ + +  + +I GF K  D + A          G+ P    Y  +ITA    G+
Sbjct: 512 MEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGK 571

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              A    +E+++   KP T+ +  ++ G+ + G +K A  V   M  SG +P  HTY+ 
Sbjct: 572 MDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNA 631

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI       + E A  +L EM ++   PN   Y+ I+ GY   G+  + F    +++  G
Sbjct: 632 LILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEG 691

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           ++ D + Y  ++    K   +  A+A    M ++ I  +T  +N LID   + G    A 
Sbjct: 692 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAA 751

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L ++M+  G  P   TY   IN   +    +   + +  M++ G+ PNV TYTTL++ +
Sbjct: 752 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGW 811

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA----- 610
            ++            L ++A++ F  M+  GLKP     + L+ +       A       
Sbjct: 812 ARA-----------SLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPG 860

Query: 611 -FAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +V + M +  L  D+ T     K L+++++
Sbjct: 861 ILSVCREMVDCELTVDMGTAVHWSKCLLKIER 892



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 168/376 (44%), Gaps = 24/376 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  ++   +  G    A   FE+++  G++P +  Y  L+  Y     +++A   
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V +M+  G+     TYS+L+  +A  G  ESA    +E +  H+  N+ IY  I+  Y  
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           R    +   +++EM+  G++     Y+ M+D +         +  F+R    G+ P  IT
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A E+ +EM+  G      TY+++IN   + + W +   +  ++ 
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ----------------------- 574
             G+ P+VV Y  ++  +   G+ D A+  ++ +  Q                       
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608

Query: 575 -AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A++ F +MR  G  P+    N+LI    E ++  +A  +L  M   G+ P+  TYTT+M
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668

Query: 634 KALIRVDKFHKVFSSY 649
                +    K F+ +
Sbjct: 669 HGYASLGDTGKAFTYF 684


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 177/388 (45%), Gaps = 24/388 (6%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           +   G+   A   LG+    G  P   T   V+  L  +G   +A    + +   G+   
Sbjct: 129 YCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLD 188

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              Y  L+ G  K+G   DA  ++ EME   V P+   Y+++ID++        AR +  
Sbjct: 189 EVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           ++      P+   Y+ ++ G+   G+W    Q++ EM +  + P+ + +NV+ID F +  
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A   F+ M+  G +PD +T+NTLI  H   G    A +LF+ + ERG  P   +Y 
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-- 572
           I+I    + +R ++   L   MR + ++ ++V Y++L+D   +SGR   A E    ++  
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 573 ----------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
                                 D  +  F++M   GL P+ L  N LIN + + +R  EA
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +L  M+   L PD +TY +L   L +
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCK 516



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 198/427 (46%), Gaps = 13/427 (3%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A +++  + + GY  + I  + V++ L    ++  ++    +  +    + LD      +
Sbjct: 138 AFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAM--DFHDNVAAQGMLLDEVCYGTL 195

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  K G +  A + L   +G  + P    Y  +I +      T +A  ++ ++ + G+
Sbjct: 196 INGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGI 255

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    Y +L++G+ + G   + + ++ EM    + P+ +T+++LIDA+   G+   A+ 
Sbjct: 256 DPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQG 315

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +   M     +P+   ++ +++G+   G      ++   +   G+ PD   Y ++I  + 
Sbjct: 316 MFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYC 375

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   +  A++ F+ M  + +  D + +++LID   K GR   A ELF  +   G  P   
Sbjct: 376 KCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI 435

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYNI+I+   + +  +    L   M  +GL P V+TY  L++ Y +S R           
Sbjct: 436 TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR--------- 486

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +A+N   VM++  L P ++  NSL +   +  R ++A+ + + M   G   DV TY  
Sbjct: 487 --EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 632 LMKALIR 638
           L+ A  +
Sbjct: 545 LLDAFCK 551



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 184/413 (44%), Gaps = 15/413 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK-IDSSLLQKL 252
           +T   ++     N +++KA++    +   G   D + Y  +I  L +  + ID+    +L
Sbjct: 155 ITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF---QL 211

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +E+E   ++ +  + N +I  F K     KA         +G+ P   TY ++I     
Sbjct: 212 LQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCR 271

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +G+  E + +  E+    + P    +N L+  + + G + +A+ + + M + G  PD  T
Sbjct: 272 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 331

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ LI  +   G    AR +   +      P+ + Y+ ++ GY           +  EM+
Sbjct: 332 FNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMR 391

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              +  D   Y+ +ID   K   + +A   F  + ++G  P+ IT+N LID   K    D
Sbjct: 392 CKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDID 451

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              ELF+ M  +G  P   TYNI+IN   + +R  +   LL  M+++ L P+ +TY +L 
Sbjct: 452 MGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLF 511

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           D   +SGR  DA E            F+VM   G        N L++AF + Q
Sbjct: 512 DGLCKSGRISDAWE-----------LFKVMHVGGPPVDVATYNVLLDAFCKAQ 553



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/495 (22%), Positives = 210/495 (42%), Gaps = 16/495 (3%)

Query: 72  DDVLSLQKQRYDFTPLLNFLSENSNSESASALASSP---SSLNRVEFKLAESYRAVPAPL 128
           DD ++L     +  PL + +  N+   S   +   P   S L ++ FK        P+  
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFK-----GVTPSIF 120

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWL-----QKHNLCYSYELLYSILIHALGRSEKLYEAF 183
             S+  N       +  A++V+  +     Q +N+  +  ++  + I+   +    +   
Sbjct: 121 TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLT-TVMKGLCINGEVQKAMDFHDN 179

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           + +Q   L  + Y  LI+   +      A  L+ +M       + + Y+++I S  +   
Sbjct: 180 VAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDEL 239

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
              +  + LY +I    I+ D      +I GF + G   +  + +       ++P   T+
Sbjct: 240 TCKA--RDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF 297

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I A    G+ IEA+ +F  + + G +P    +N L+ G+   G + +A  +   +  
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE 357

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+LPD  +Y++LI  Y    R + A  +  EM   +   +  +YS ++ G    G    
Sbjct: 358 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISY 417

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            +++   + + G  P+   YN++ID F K   +   +  F  M  +G+ P  +T+N LI+
Sbjct: 418 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 477

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            + K  R   A  L   MQ +   P + TYN + + L +  R  D   L   M   G   
Sbjct: 478 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 537

Query: 544 NVVTYTTLVDIYGQS 558
           +V TY  L+D + ++
Sbjct: 538 DVATYNVLLDAFCKA 552



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 11/332 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F  L      P    +N ++   VKM +   A  ++ +M   GV P   T S+ I
Sbjct: 67  DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 126

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           + Y + G    A  VL  +     +PN+   + ++ G    GE Q+       + + G+ 
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D   Y  +I+   K      A      M  + ++P+ + +N +ID   K     +A +L
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           + ++ + G  P   TY  +I       +W +VK+L+  M  + + PNV T+  L+D + +
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G+  +A    +G+       F +M   G +P  +  N+LI+         EA  +   +
Sbjct: 307 KGKMIEA----QGM-------FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTV 355

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E G+ PDV +YT L+    +  +  +  S +
Sbjct: 356 FERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 11/186 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N +  A+  F+ +++    P  I +NT+I    K      A  L ++M  +G  P   T
Sbjct: 62  FNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFT 121

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            +I IN             +LG +  +G  PN +T TT++              C+ G  
Sbjct: 122 LSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGL-----------CINGEV 170

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++    +   G+    +   +LIN   +  R  +AF +LQ M+   +KP++V Y  +
Sbjct: 171 QKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMI 230

Query: 633 MKALIR 638
           + +  +
Sbjct: 231 IDSFCK 236


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 231/491 (47%), Gaps = 21/491 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
            +++ L+HA   +  +  A      + S+   LT +TY+ LIS  A+ +D + A NL  +
Sbjct: 300 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 359

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +      + I YS +I +  ++  ++ +  ++L +E+E D I+    + + ++ G+   
Sbjct: 360 AKTKLSSLNGIIYSNIIHAHCQSGNMERA--EELVREMEEDGIDAPIDVYHSMMHGYTII 417

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            + +K +      +  G  P   +Y  ++      G+  +A ++ +E++  G+K   K Y
Sbjct: 418 QNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 477

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ G++ +    +A  +  EM RSG+ PD   Y+LLI+A+   G  + A  +L++M+ 
Sbjct: 478 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 537

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P++  +  I+ GY   G+ +     L  M+ SG  P    YN +I    + + +  
Sbjct: 538 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 597

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++  D+M   GI P+  T+  ++  +   G   +A E F +++E G       Y  ++ 
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R +    +   M  Q +  N   Y  L+D + + G   D  E        A + 
Sbjct: 658 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG---DVWE--------AEDL 706

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+ DG+ P+     S INA  +      A  V++ M + GLKP+V TYTTL+K   R
Sbjct: 707 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 766

Query: 639 V---DKFHKVF 646
           V   D+  K F
Sbjct: 767 VSLPDRALKCF 777



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 221/489 (45%), Gaps = 24/489 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRL----TPL-TYNALISACARNDDLEKALNLMSK 218
           ++YS +IHA  +S  +  A  L +         P+  Y++++       +  K L +  +
Sbjct: 370 IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 429

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +++ G+    I+Y  ++    +  K+  +L   + KE+E   I+ + +  + +I GF   
Sbjct: 430 LKECGFKPSIISYGCLLNLYVKIGKVAKAL--SISKEMESCGIKHNNKTYSMLINGFIHL 487

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D + A          GL P  A Y  +I A    G    A  + E++++  ++P  +A+
Sbjct: 488 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 547

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +++GY   G +K A   +  M RSG +P   TY+ LI       + + A  VL +M +
Sbjct: 548 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 607

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   PN   Y+ I+ GY   G+  + F+   ++K SG++ D + Y  ++    K   +  
Sbjct: 608 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 667

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+A    M  + I  +T  +N LID   + G    AE+L ++M+E G  P   TY   IN
Sbjct: 668 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 727

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +    +  ++++  M   GL PNV TYTTL+  + +             L D+A+  
Sbjct: 728 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV-----------SLPDRALKC 776

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVVTYTTL 632
           F  M+  GLKP   + + L+ +        E        +V + M EN L  D+ T    
Sbjct: 777 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 836

Query: 633 MKALIRVDK 641
            + L ++++
Sbjct: 837 SRWLHKIER 845



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 129/555 (23%), Positives = 221/555 (39%), Gaps = 69/555 (12%)

Query: 122 RAVPAPLWHSLLKNLCSS-----NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           R  P   WH      C        S  D   AVVS  ++       E    I+ +A    
Sbjct: 220 RREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGD 279

Query: 177 EKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           +    A   + R R + P    + +L+ A A   D+  AL+ + +M+ +G     + YS+
Sbjct: 280 KHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSI 339

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I    + N  DS     L+KE    K +L    LN +I                     
Sbjct: 340 LISGFAKIN--DSQSADNLFKEA---KTKLSS--LNGII--------------------- 371

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
                    Y+ +I A   SG    AE +  E++E G+      Y++++ GY  +     
Sbjct: 372 ---------YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 422

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              V   ++  G  P   +Y  L++ Y   G+   A  + KEME    K N+  YS ++ 
Sbjct: 423 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 482

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+    ++   F + +EM  SG++PD   YN++I+ F K   +  A+   ++M  E ++P
Sbjct: 483 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 542

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
               +  +I+ +   G    A +  + M+  G  P   TYN +I+ L  + + +    +L
Sbjct: 543 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 602

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M   G+ PN  TYT ++  Y  SG    A E                        C  
Sbjct: 603 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 662

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G    A+   R M    +  +    N LI+ +       EA  +++ MKE+G+ P++ TY
Sbjct: 663 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTY 722

Query: 630 TTLMKALIRVDKFHK 644
           T+ + A  +     +
Sbjct: 723 TSYINACCKAGDMQR 737



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +I   +  G    A A FE ++  G++P    + +L+  Y     ++ A   
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 321

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS+LI  +A     +SA  + KE +   +  N  IYS I+  +  
Sbjct: 322 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 381

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G  +R  ++++EM+  G++     Y+ M+  +      +  +  F+R+   G +P  I+
Sbjct: 382 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  L++ + K G+  +A  + +EM+  G      TY+++IN       + +   +   M 
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  L++ + + G  D AI  LE            M+ + ++PSN A   +
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK-----------MQKERMQPSNRAFRPI 550

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  +        A   L  M+ +G  P V+TY  L+  L+R  K  +  S
Sbjct: 551 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 600



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 28/253 (11%)

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           WQ      + +     +P    + +MI  + K    HHA A F+ M + GIEP+   + +
Sbjct: 249 WQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTS 304

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+  +        A    EEM+  G      TY+I+I+   +    +    L    + + 
Sbjct: 305 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 364

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA---------------------- 578
              N + Y+ ++  + QSG  + A E +  + +  ++A                      
Sbjct: 365 SSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 424

Query: 579 --FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  ++  G KPS ++   L+N + +  + A+A ++ + M+  G+K +  TY+ L+   
Sbjct: 425 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 484

Query: 637 IRVDKFHKVFSSY 649
           I +  F   F+ +
Sbjct: 485 IHLHDFANAFAIF 497


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 183/401 (45%), Gaps = 34/401 (8%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTAT--YAAVITALSNSGRTIEAEAVFEELKESGLK 332
             + G+   A+R +    G+      A    AA+I  L  SGRT +A  V   L  SG  
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV---LAASG-- 131

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    YNA++ GY   G L  A  +V++M    V PD +TY+ LI      GR  +A  V
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L++M      P+   Y+ +L     R  +++  ++L EM   G  PD   YNV+++   +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  AM     + S G EP+T+++N ++   F   R++ AE+L EEM  +G  P   T
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------ 566
           +N++I+ L  +   E    +L  M   G  PN ++Y  L+  + +  +   A+E      
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 567 ------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                             C  G  D A+     ++  G  P  ++ N++I+   +  +  
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           EA  +L  M   GL+PD++TY+T+   L R D+  +   ++
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF 469



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 197/410 (48%), Gaps = 16/410 (3%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+ ++       ++D++  ++L  ++    +E D    N +I G    G  S A+ 
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAA--RRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALA 187

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   TY  ++ A        +A  + +E+ + G  P    YN +L G  
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G ++DA   +  +   G  P+  +Y++++     A RWE A  +++EM      PN  
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +++    RG  +   +VL++M   G  P++  YN ++  F K   +H AM   + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +S G  PD +++NTL+    + G  D A EL  +++++G  P   +YN +I+ L +  + 
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   LL  M ++GL P+++TY+T+      SG       C E   ++AV  F  ++  G
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIA-----SGL------CREDRIEEAVRTFCKVQDMG 476

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           ++P+    N+++    + +    A  +  YM  +G  P+  TYT L++ L
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 175/389 (44%), Gaps = 14/389 (3%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D  + N ++ G+  AG    A R +     + + P   TY  +I  L   GRT  A AV 
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVA---DMPVEPDAYTYNTLIRGLCGRGRTSNALAVL 189

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           E++   G  P    Y  LL+   K    K A  ++ EM   G  PD  TY+++++     
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR E A   LK +     +PN+  Y+ +L G      W+   ++++EM   G  P+   +
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N++I    +   +  AM   ++M   G  P+++++N L+    K  +  +A E  E M  
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           RG +P   +YN ++  L      +    LL  ++ +G  P +++Y T++D   ++G+  +
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E L+            M + GL+P  +  +++ +    + R  EA      +++ G++
Sbjct: 430 ALELLDE-----------MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           P    Y  ++  L +  + H     + + 
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYM 507



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 197/460 (42%), Gaps = 11/460 (2%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR 190
           +L+K LC+S  + D    + +            ++Y+ ++     + +L  A  L     
Sbjct: 109 ALIKKLCASGRTADARRVLAASGPD-------VMVYNAMVAGYCGAGQLDAARRLVADMP 161

Query: 191 LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
           + P   TYN LI           AL ++  M + G   D + Y++++++  + +    ++
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
             KL  E+       D    N V+ G  + G    AM FL      G  P T +Y  V+ 
Sbjct: 222 --KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
            L  + R  +AE + EE+   G  P    +N L+    + G ++ A  V+ +M + G  P
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  +Y+ L+ A+    +   A   ++ M      P+   Y+ +L      GE     ++L
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            ++K  G  P    YN +ID   K      A+   D M S+G++PD IT++T+     + 
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            R + A   F ++Q+ G  P    YN ++  L ++    +   L   M + G +PN  TY
Sbjct: 460 DRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTY 519

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
           T LV+     G   +A E    L  + V   ++M+   +K
Sbjct: 520 TILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMKKGSIK 559


>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
          Length = 879

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 231/491 (47%), Gaps = 21/491 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
            +++ L+HA   +  +  A      + S+   LT +TY+ LIS  A+ +D + A NL  +
Sbjct: 278 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 337

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +      + I YS +I +  ++  ++ +  ++L +E+E D I+    + + ++ G+   
Sbjct: 338 AKTKLSSLNGIIYSNIIHAHCQSGNMERA--EELVREMEEDGIDAPIDVYHSMMHGYTII 395

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            + +K +      +  G  P   +Y  ++      G+  +A ++ +E++  G+K   K Y
Sbjct: 396 QNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 455

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ G++ +    +A  +  EM RSG+ PD   Y+LLI+A+   G  + A  +L++M+ 
Sbjct: 456 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 515

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P++  +  I+ GY   G+ +     L  M+ SG  P    YN +I    + + +  
Sbjct: 516 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 575

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++  D+M   GI P+  T+  ++  +   G   +A E F +++E G       Y  ++ 
Sbjct: 576 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 635

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R +    +   M  Q +  N   Y  L+D + + G   D  E        A + 
Sbjct: 636 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG---DVWE--------AEDL 684

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+ DG+ P+     S INA  +      A  V++ M + GLKP+V TYTTL+K   R
Sbjct: 685 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 744

Query: 639 V---DKFHKVF 646
           V   D+  K F
Sbjct: 745 VSLPDRALKCF 755



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 221/489 (45%), Gaps = 24/489 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRL----TPL-TYNALISACARNDDLEKALNLMSK 218
           ++YS +IHA  +S  +  A  L +         P+  Y++++       +  K L +  +
Sbjct: 348 IIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 407

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +++ G+    I+Y  ++    +  K+  +L   + KE+E   I+ + +  + +I GF   
Sbjct: 408 LKECGFKPSIISYGCLLNLYVKIGKVAKAL--SISKEMESCGIKHNNKTYSMLINGFIHL 465

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D + A          GL P  A Y  +I A    G    A  + E++++  ++P  +A+
Sbjct: 466 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 525

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +++GY   G +K A   +  M RSG +P   TY+ LI       + + A  VL +M +
Sbjct: 526 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 585

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   PN   Y+ I+ GY   G+  + F+   ++K SG++ D + Y  ++    K   +  
Sbjct: 586 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 645

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+A    M  + I  +T  +N LID   + G    AE+L ++M+E G  P   TY   IN
Sbjct: 646 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 705

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +    +  ++++  M   GL PNV TYTTL+  + +             L D+A+  
Sbjct: 706 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV-----------SLPDRALKC 754

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVVTYTTL 632
           F  M+  GLKP   + + L+ +        E        +V + M EN L  D+ T    
Sbjct: 755 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 814

Query: 633 MKALIRVDK 641
            + L ++++
Sbjct: 815 SRWLHKIER 823



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/555 (22%), Positives = 219/555 (39%), Gaps = 69/555 (12%)

Query: 122 RAVPAPLWHSLLKNLCSS-----NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           R  P   WH      C        S  D   AVVS  ++       E    I+ +A    
Sbjct: 198 RREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGD 257

Query: 177 EKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           +    A   + R R + P    + +L+ A A   D+  AL+ + +M+ +G     + YS+
Sbjct: 258 KHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSI 317

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I    + N  DS     L+KE +     L+G +                          
Sbjct: 318 LISGFAKIN--DSQSADNLFKEAKTKLSSLNGII-------------------------- 349

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
                    Y+ +I A   SG    AE +  E++E G+      Y++++ GY  +     
Sbjct: 350 ---------YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENK 400

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              V   ++  G  P   +Y  L++ Y   G+   A  + KEME    K N+  YS ++ 
Sbjct: 401 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 460

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+    ++   F + +EM  SG++PD   YN++I+ F K   +  A+   ++M  E ++P
Sbjct: 461 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 520

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
               +  +I+ +   G    A +  + M+  G  P   TYN +I+ L  + + +    +L
Sbjct: 521 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 580

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M   G+ PN  TYT ++  Y  SG    A E                        C  
Sbjct: 581 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 640

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G    A+   R M    +  +    N LI+ +       EA  +++ MKE+G+ P++ TY
Sbjct: 641 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTY 700

Query: 630 TTLMKALIRVDKFHK 644
           T+ + A  +     +
Sbjct: 701 TSYINACCKAGDMQR 715



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 156/350 (44%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +I   +  G    A A FE ++  G++P    + +L+  Y     ++ A   
Sbjct: 240 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 299

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS+LI  +A     +SA  + KE +   +  N  IYS I+  +  
Sbjct: 300 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 359

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G  +R  ++++EM+  G++     Y+ M+  +      +  +  F+R+   G +P  I+
Sbjct: 360 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 419

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  L++ + K G+  +A  + +EM+  G      TY+++IN       + +   +   M 
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  L++ + + G  D AI  LE            M+ + ++PSN A   +
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK-----------MQKERMQPSNRAFRPI 528

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  +        A   L  M+ +G  P V+TY  L+  L+R  K  +  S
Sbjct: 529 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 578



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 28/253 (11%)

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           WQ      + +     +P    + +MI  + K    HHA A F+ M + GIEP+   + +
Sbjct: 227 WQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTS 282

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+  +        A    EEM+  G      TY+I+I+   +    +    L    + + 
Sbjct: 283 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 342

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA---------------------- 578
              N + Y+ ++  + QSG  + A E +  + +  ++A                      
Sbjct: 343 SSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 402

Query: 579 --FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  ++  G KPS ++   L+N + +  + A+A ++ + M+  G+K +  TY+ L+   
Sbjct: 403 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 462

Query: 637 IRVDKFHKVFSSY 649
           I +  F   F+ +
Sbjct: 463 IHLHDFANAFAIF 475


>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           RL   TY  L+ A  R+ D ++A N+  +M   GY  D   Y++++ +L +  ++D S  
Sbjct: 236 RLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSY- 294

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K++K+++      D      +I    K G A +++         G +P    Y  +I A
Sbjct: 295 -KVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQA 353

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           LS SG   +A  +F  + ++  +P    Y+ +L   V  G L   + V   +E S    +
Sbjct: 354 LSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV---LEVSNKFIN 410

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +  Y+ L+   +  G    A  +   M   H   +   Y  +L      G+     ++L 
Sbjct: 411 KSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLS 470

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++   G+  DT  YN ++ T GK   + H    +++M  +G  PD  T+N LI    + G
Sbjct: 471 KVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVG 530

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           +   A E+FEE++     P   +YN +IN LG+    ++       M+ +GL P+VVTY+
Sbjct: 531 KVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS 590

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL++ +G++    D +E    L D+       M T G  P+ +  N L++      R AE
Sbjct: 591 TLIECFGKT----DKVEMARSLFDR-------MITQGCCPNIVTYNILLDCLERAGRTAE 639

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
              +   ++E GL PD +TY  L
Sbjct: 640 TVDLYAKLREQGLTPDSITYAIL 662



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 198/408 (48%), Gaps = 13/408 (3%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L +  + +  +D +Y V   ++ KH  C   E  Y+I+I   G+  +  E+  L + 
Sbjct: 277 YNMLLDALAKDEQLDRSYKVFKDMKLKH--CNPDEYTYTIMIRMTGKMGRAEESLALFEE 334

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +  TP  + YN +I A +++  ++KA+ L   M ++    +   YS+++  L    +
Sbjct: 335 MLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQ 394

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                L +L + +E     ++  +   ++   +K G +S+A R                Y
Sbjct: 395 -----LGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAY 449

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++ +L   G+T+EA  +  ++ E G+   T  YN +L    K+  +     +  +M++
Sbjct: 450 ISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQ 509

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD  TY++LI +    G+ + A  V +E+E S  KP+   Y+ ++      G+   
Sbjct: 510 DGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDE 569

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                 EM+  G+ PD   Y+ +I+ FGK + +  A + FDRM+++G  P+ +T+N L+D
Sbjct: 570 AHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLD 629

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           C  + GR     +L+ +++E+G  P + TY I+  L     R   V+R
Sbjct: 630 CLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRKFRVRR 677


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 180/368 (48%), Gaps = 24/368 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  V+  L   G T +A  +   +++   KP T+ Y  ++  + K G L  A  +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++EM++  + PD  TYS LIDA     +WE+ R +  EM   +  PN   ++ ++ G   
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+ +   ++++ M   GV+PD   YN++ID +G    +  A   FD M+++ IEPD I+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LI+ + +  + D A ++  E+ ++G  P   T N++++ L E  R +  +     M 
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
           + G +P++ T+ TL+  Y ++G  ++A+                         C  G  D
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A   F  +   GL P  +   ++I+ + ++    EA  +L+ M++NG   D  TY  ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 634 KALIRVDK 641
           +  +R +K
Sbjct: 536 RGFLRSNK 543



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 197/475 (41%), Gaps = 51/475 (10%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEI 256
           ++++C      +   ++++   + G   + + ++ +I+ L   NK+  +  L +KL +E 
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
            C+  E+   +   V+ G  K G   KA   L + +     P T TY  VI A    G  
Sbjct: 173 ICEPNEV---MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGML 229

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A ++  E+K+  + P    Y+ L+    K+   ++   +  EM    + P+  T++ +
Sbjct: 230 DGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSV 289

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ID     G+ E A  +++ M      P+   Y+ I+ GY  RG+  R  ++   M +  +
Sbjct: 290 IDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSI 349

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EPD   YN++I+ + +   +  AM     +  +G++P  +T N L+   F+ GR   A+ 
Sbjct: 350 EPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQN 409

Query: 497 LFEEMQERGYFP-----CT------------------------------TTYNIMINLLG 521
            F+EM   G+ P     CT                                Y  +I+ L 
Sbjct: 410 FFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  + +        +   GL P+V+TYT ++  Y           C EGL D+A +  R 
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY-----------CQEGLLDEAKDMLRK 518

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           M  +G    N   N ++  F    + +E  A L+ +       +  T   LM  +
Sbjct: 519 MEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDII 573



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 209/453 (46%), Gaps = 17/453 (3%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           + FK    Y  V    + +L++ L + N   D A  +   L + N+C   E++Y  +++ 
Sbjct: 132 IHFKKGIPYNEVT---FTTLIRGLFAENKVKD-AVHLFKKLVRENICEPNEVMYGTVMNG 187

Query: 173 L---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L   G ++K ++   L ++    P   TY  +I A  ++  L+ A +L+++M+Q     D
Sbjct: 188 LCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPD 247

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---DASKA 284
              YS +I +L + ++ ++  ++ L+ E+    I  +    N VI G  K G   DA + 
Sbjct: 248 IFTYSTLIDALCKLSQWEN--VRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEI 305

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           MR++ + +GV   P   TY  +I      G+   A  +F+ +    ++P   +YN L+ G
Sbjct: 306 MRYM-IEKGV--DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILING 362

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           Y +   + +A  V  E+ + G+ P   T ++L+      GR +SA+    EM  +   P+
Sbjct: 363 YARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            + +  +L GY   G  +       +++    + +   Y  +ID   K   L  A A F+
Sbjct: 423 LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFE 482

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           ++   G+ PD IT+  +I  + + G  D A+++  +M++ G      TYN+++       
Sbjct: 483 KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +  ++K  L  +  +       T   L+DI  +
Sbjct: 543 KVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + F    CL  A + F +M+     P   +++ L+        Y     LF E+ +    
Sbjct: 45  NEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIP 104

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
                 +I++N      R +    +L     +G+  N VT+TTL+       +  DA+  
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHL 164

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C +G + +A +  R+M     KP+      +I+AF 
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFC 224

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV---FSSYLFFNIY 655
           +D     A ++L  MK+  + PD+ TY+TL+ AL ++ ++  V   F   +  NIY
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280


>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           RL   TY  L+ A  R+ D ++A N+  +M  +GY  D   Y++++ +L +  ++D S  
Sbjct: 231 RLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSY- 289

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K++K+++      D      +I    K G A +++         G +P    Y  +I A
Sbjct: 290 -KVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQA 348

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           LS SG   +A  +F  + ++  +P    Y+ +L   V  G L   + V   +E S    +
Sbjct: 349 LSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEV---LEVSNKFIN 405

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +  Y+ L+   +  G    A  +   M   H   +   Y  +L      G+     ++L 
Sbjct: 406 KSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLS 465

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++   G+  DT  YN ++ T GK   + H    +++M  +G  PD  T+N LI    + G
Sbjct: 466 KVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVG 525

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           +   A E+FEE++     P   +YN +IN LG+    ++       M+ +GL P+VVTY+
Sbjct: 526 KVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS 585

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL++ +G++    D +E    L D+       M T G  P+ +  N L++      R AE
Sbjct: 586 TLIECFGKT----DKVEMARSLFDR-------MITQGCCPNIVTYNILLDCLERAGRTAE 634

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
              +   ++E GL PD +TY  L
Sbjct: 635 TVDLYAKLREQGLTPDSITYAIL 657



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 198/408 (48%), Gaps = 13/408 (3%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++L +  + +  +D +Y V   ++ KH  C   E  Y+I+I   G+  +  E+  L + 
Sbjct: 272 YNMLLDALAKDEQLDRSYKVFKDMKLKH--CNPDEYTYTIMIRMTGKMGRAEESLALFEE 329

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +  TP  + YN +I A +++  ++KA+ L   M ++    +   YS+++  L    +
Sbjct: 330 MLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQ 389

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                L +L + +E     ++  +   ++   +K G +S+A R                Y
Sbjct: 390 -----LGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAY 444

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            +++ +L   G+T+EA  +  ++ E G+   T  YN +L    K+  +     +  +M++
Sbjct: 445 ISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQ 504

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G  PD  TY++LI +    G+ + A  V +E+E S  KP+   Y+ ++      G+   
Sbjct: 505 DGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDE 564

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
                 EM+  G+ PD   Y+ +I+ FGK + +  A + FDRM+++G  P+ +T+N L+D
Sbjct: 565 AHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLD 624

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           C  + GR     +L+ +++E+G  P + TY I+  L     R   V+R
Sbjct: 625 CLERAGRTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRKFRVRR 672


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 207/466 (44%), Gaps = 33/466 (7%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           RQ  TP    +N ++ +  ++      L+L  KM   G   +  N +++I    +   I 
Sbjct: 79  RQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIP 138

Query: 246 SSLLQKL--YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
             + Q    + ++      LD      +I G  K G+   A+  L    G  +      Y
Sbjct: 139 CQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMY 198

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  +       +A  ++ E+   G+ P    Y+AL+ G+  +G LKDA  + +++  
Sbjct: 199 NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 258

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
             + PD +T+++L+D +    + +  + V   M      P+   Y+ ++ GY    E   
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +   M   GV PD   YN++I+ F K   +  AM  F+ M  + I P+ +T+N+LID
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 378

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K GR   A +L ++M +RG  P   TYN +I+ L +  + +    L+   + QG+ P
Sbjct: 379 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++ TYT L+          D +  +EG  D  VN + VM               I+ F +
Sbjct: 439 SMYTYTILI----------DGLCKVEGY-DITVNTYNVM---------------IHGFCK 472

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
                EA ++L  MK++   P+ VTY   +++L+     DK  K+F
Sbjct: 473 KGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLF 518



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/464 (21%), Positives = 210/464 (45%), Gaps = 52/464 (11%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           ++  ++Y++  +    N+D++ A++L +++ +         ++ ++ SL ++    + L 
Sbjct: 48  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVL- 106

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAG----DASKAMRFLGMAQGVGLSPKTATYAA 305
             L +++E   I+ +    N +I  F + G       +A  F      +G      +Y  
Sbjct: 107 -SLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGT 165

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I  L   G T  A  + + +    ++     YN ++ G  K  ++ DA  + SEM   G
Sbjct: 166 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +                                    PN   YS +++G+   G+ +   
Sbjct: 226 I-----------------------------------SPNVVTYSALISGFFVVGKLKDAI 250

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +  ++    ++PD + +N+++D F K   +      F  M+ +GI PD +T+N+L+D +
Sbjct: 251 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGY 310

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
                 + A+ +F  M + G  P   +YNI+IN   + ++ +    L   M  + ++PNV
Sbjct: 311 CLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 370

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VTY +L+D   +SGR   A++ ++ + D+           G+ P+ L  NS+I+A  +  
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDR-----------GVPPNILTYNSIIDALFKTH 419

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  +A A++   K+ G++P + TYT L+  L +V+ +    ++Y
Sbjct: 420 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTY 463



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 22/388 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  LIH L +  +   A  L QR      +L  + YN +I    ++  +  A +L S+M 
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 222

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + YS +I       K+  ++   L+ +I  + I+ DG   N ++ GF K   
Sbjct: 223 SKGISPNVVTYSALISGFFVVGKLKDAI--DLFNKIILENIKPDGYTFNILVDGFCKDRK 280

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +      M    G+ P   TY +++           A+++F  + + G+ P  ++YN 
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+ K+  +  A  + +EM    ++P+  TY+ LID  + +GR   A  ++ +M    
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ I+       +  +   ++ + K  G++P  + Y ++ID   K        
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV------- 453

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                   EG +    T+N +I    K G +D A  L  +M++    P   TY I I  L
Sbjct: 454 --------EGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            +    +  ++L   M  +GLL    +Y
Sbjct: 506 LDNNENDKAEKLFREMITRGLLNRSASY 533


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 226/497 (45%), Gaps = 37/497 (7%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            +H L ++ +  EA  L +++  +L  + Y  +IS        E+A++ +S+MR      
Sbjct: 273 FVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + + Y +++    R  ++     +++   +  +      ++ N +I  + ++GD S A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRC--KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGR-----TIE-AEAVFEELKESGLKPRTKAYNA 340
            L      G  P    Y  +I  +  + +      +E AE  + E+ ++ +       + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L +     G  + A  ++ EM   G +PD  TYS +I    NA + ++A ++ +EM+ +H
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ F Y+ ++  +   G  Q+  +   EM   G  P+   Y  +I  + K   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG-------YF------ 507
             F+ MLSEG  P+ +T+  LID H K G+ ++A +++  M+          YF      
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 508 ---PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  +++ L +  + ++ + LL  M  +G  PN + Y  L+D + + G+ D+A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    Q V  F  M   G  P+    +SLI+   +D+R   A  VL  M EN   P
Sbjct: 691 ---------QMV--FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739

Query: 625 DVVTYTTLMKALIRVDK 641
           +V+ YT ++  L +V K
Sbjct: 740 NVIIYTEMIDGLCKVGK 756



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 225/546 (41%), Gaps = 84/546 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           L+++ +  LGR + L          + + LTYNAL+      D L+ A  +  +M   G+
Sbjct: 212 LWNVALEELGRLKDL--------GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           + D       +  L +  +   +L       IE ++ +LD  +   +I G  +A    +A
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALAL-----IEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           M FL   +     P   TY  ++       +    + +   +   G  P  + +N+L+  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI--------------------------D 378
           Y + G    A  ++ +M   G  P    Y++LI                          D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 379 AY---------------ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           A+                 AG++E A  +++EM      P++  YS+++    +  +   
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F + +EMKS+ V PD   Y ++ID+F K   L  A   FD M+ +G  P+ +T+  LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL- 542
            + K  +   A ELFE M   G  P   TY  +I+   +  + E   ++   MR    + 
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 543 ---------------PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
                          PN+ TY  LVD   ++ +  +A + L+           VM  +G 
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD-----------VMSVEGC 667

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
           +P+++  ++LI+ F +  +  EA  V   M E G  P+V TY++L+  L    R+D   K
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 645 VFSSYL 650
           V S  L
Sbjct: 728 VLSRML 733



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 228/509 (44%), Gaps = 48/509 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+  AFLL +  +   + P   TY  LI +  +   L++A     +M 
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   + + Y+ +I +  +  K+ S+   +L++ +  +    +      +I G  K+G 
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSA--NELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA +     +G                    P   TY A++  L  + +  EA  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +   G +P    Y+AL+ G+ K+G L +A+ V ++M   G  P+ +TYS LID      
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL  M  +   PN  IY+ ++ G    G+    ++++  M+  G  P+   Y 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID FGK   +   +    +M ++G  P+ +T+  LI+     G  D A +L +EM++ 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR-------LLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            Y+P         ++ G ++  E   R       LL  +     +P +  Y  L+D + +
Sbjct: 841 -YWP--------KHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR + A+E  + +S  +  ++     D         +SLI +     +  +AF +   M
Sbjct: 892 AGRLELALELHKEMS--SCTSYSAADKD-------LYSSLIESLSLASKVDKAFELYADM 942

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + G  P++  +  L+K LIR++++ +  
Sbjct: 943 IKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 262/612 (42%), Gaps = 73/612 (11%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSL---NRVEFKLAESYRAVPAPLWHSLLKNLCS 138
           +  + +  F+  +S+ ++   L  S  S+   +RVE  LAE +    A L  SLL+    
Sbjct: 26  FKISTISRFICTSSSEDNLHGLVDSDFSVPESSRVESFLAEEF----AFLRDSLLETGSD 81

Query: 139 SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS-EKLYEAFLLSQRQRLTPLTYN 197
           + +S++ + +          C +  +L S +I   G       + FL   R++L      
Sbjct: 82  TGASVNKSVS--------GRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVV 133

Query: 198 ALISACARNDDLEKALNLMSKMRQDGY-HCDFINYSLV-IQSLTRTNKIDSSLLQKLYKE 255
            ++S   +N +L     + +  RQ GY H   + ++L+ +      +++    L+++  E
Sbjct: 134 DVLSL-VKNPELGVKFFIWAG-RQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE 191

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
              DK E+ G+LLN +I    + G  + A+  LG  + +G  P   TY A++     + R
Sbjct: 192 ---DK-EILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADR 247

Query: 316 TIEAEAVFEELKESG--------------------------------LKPRTKAYNALLK 343
              A  V  E+ +SG                                 K  T  Y  ++ 
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMIS 307

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  +    ++A   +S M  S  +P+  TY +L+       +    + +L  M      P
Sbjct: 308 GLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP 367

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI------DTFGKYNCLH 457
           +  I++ ++  Y   G++   +++LK+M   G +P    YN++I      +     + L 
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLE 427

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  A+  ML   +  + +  + L  C    G++++A  +  EM  +G+ P T+TY+ +I
Sbjct: 428 LAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            LL    + ++   L   M++  ++P+V TYT L+D +           C  GL  QA  
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF-----------CKVGLLQQARK 536

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M  DG  P+ +   +LI+A+ + ++ + A  + + M   G  P+VVTYT L+    
Sbjct: 537 WFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596

Query: 638 RVDKFHKVFSSY 649
           +  +  K    Y
Sbjct: 597 KSGQIEKACQIY 608



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 208/506 (41%), Gaps = 69/506 (13%)

Query: 89  NFLSENSNSESASALASSPSSLNR--VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLA 146
            F+ + S       L  + S ++   + F+  +S   VP    +++L +   S   + L 
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID---SFCKVGLL 531

Query: 147 YAVVSWLQK--HNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNAL 199
                W  +   + C    + Y+ LIHA  ++ K+  A      +LS+      +TY AL
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591

Query: 200 ISACARNDDLEKALNLMSKMR--------------QDGYHCD--FINYSLVIQSLTRTNK 243
           I    ++  +EKA  + ++MR               DG   D     Y  ++  L + +K
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTAT 302
           +  +  + L   +  +  E +  + + +I GF K G   +A M F  M++  G  P   T
Sbjct: 652 VKEA--RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGPNVYT 708

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L    R   A  V   + E+   P    Y  ++ G  K+G   +A  ++S ME
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL---------- 412
             G  P+  TY+ +ID +  AG+ +    ++++M      PN F+  R+L          
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN-FVTYRVLINHCCAAGLL 827

Query: 413 -------------------AGYRDRGE-WQRTFQV----LKEMKSSGVEPDTHFYNVMID 448
                              AGYR   E + R F +    L E+  +   P    Y ++ID
Sbjct: 828 DDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILID 887

Query: 449 TFGKYNCLHHAMAAFDRM--LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +F K   L  A+     M   +     D   +++LI+      + D+A EL+ +M +RG 
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRL 532
            P  + +  ++  L    RWE+  +L
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEALQL 973


>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 584

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 215/441 (48%), Gaps = 18/441 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T ++   L+S   R     +A+ + + + ++G+    I Y+ ++ +LTR  + +S  +  
Sbjct: 42  TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNS--IPS 99

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L  ++E + ++ D  L N +I  F+ +G   +AM+     +  G  P T+T+  +I    
Sbjct: 100 LLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFG 159

Query: 312 NSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             GR  EA  + E + + G +KP  + YN L++ +     L++A  V+ +M  SG+ PD 
Sbjct: 160 IVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDI 219

Query: 371 HTYSLLIDAYANAGRWESA-RIVLKEMEVSH-AKPNSFIYSRILAGYRDRGEWQRTFQVL 428
            TY+ L  A+A  G  ++A R++LK  + ++  KPN      I+ GY   G      + L
Sbjct: 220 VTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFL 279

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +MK  GV P+   +N +I  +           A   M   GI+PD +T++T+++     
Sbjct: 280 YKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSS 339

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  D  EE+F++M +    P    Y+I+        + +  + LL +M   GL  NVV +
Sbjct: 340 GLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIF 399

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL-ALNSLINAFGEDQRD 607
           TT++  +  +G+ D A+   E +++               P NL    +LI  +GE ++ 
Sbjct: 400 TTIISGWCAAGKMDCALRLYEKMNEMGT------------PLNLKTYETLIWGYGEAKQP 447

Query: 608 AEAFAVLQYMKENGLKPDVVT 628
            +A  +L  M+E+G+ P++ T
Sbjct: 448 WKAEELLVTMEESGVAPEMST 468



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 14/342 (4%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +++ L   G+  EA  +F  L E G KP    Y  L+    ++        ++S++E +G
Sbjct: 49  LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V PD   ++ +I+A++++G+   A  + ++M+    KP +  ++ ++ G+   G      
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAM 168

Query: 426 QVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+ M   G V+P+   YN++I  +   N L  A     +M++ G++PD +T+NTL   
Sbjct: 169 KLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228

Query: 485 HFKCGRYDRAEELFEEMQE--RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + G  D AE L  +MQ+      P   T  I+I    ++    +  R L  M+  G+ 
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVH 288

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN V + +L+      G  D  I   +G+ +    A  +M   G+KP  +  ++++NA+ 
Sbjct: 289 PNPVVFNSLI-----KGYLD--ITDTDGVEE----ALTLMEEFGIKPDVVTYSTIMNAWS 337

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                     +   M +  ++PD+  Y+ L K  +R  +  K
Sbjct: 338 SSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDK 379



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 179/422 (42%), Gaps = 45/422 (10%)

Query: 169 LIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L+  L R  K +EA      L  +  + T +TY  L++A  R        +L+SK+ ++G
Sbjct: 49  LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D I ++ +I + + + K+  ++  K++++++    +      N +I GF   G   +
Sbjct: 109 VKPDSILFNAMINAFSDSGKVHEAM--KIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHE 166

Query: 284 AMRFLGMA-QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           AM+ L M  Q   + P   TY  +I A        EA  V  ++  SG++P    YN L 
Sbjct: 167 AMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLA 226

Query: 343 KGYVKMGYLKDAEFVVSEMER--SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           + + + G   +AE ++ +M++  + V P+E T  ++I  Y   G    A   L +M+   
Sbjct: 227 RAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG 286

Query: 401 AKPNSFIYSRILAGYRD-----------------------------------RGEWQRTF 425
             PN  +++ ++ GY D                                    G      
Sbjct: 287 VHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCE 346

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++  +M  + +EPD   Y+++   + +      A A  + M   G++ + + + T+I   
Sbjct: 347 EIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGW 406

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
              G+ D A  L+E+M E G      TY  +I   GE ++    + LL  M   G+ P +
Sbjct: 407 CAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEM 466

Query: 546 VT 547
            T
Sbjct: 467 ST 468



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAF----LLSQRQRLTP--LTYNALISACARNDDLEKA 212
           C      ++ LI   G   + +EA     ++ Q   + P   TYN LI A    ++LE+A
Sbjct: 144 CKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEA 203

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
            N+M KM   G   D + Y+ + ++  +  + D++    L  +   +K++ + +    +I
Sbjct: 204 WNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIII 263

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
            G+ K G+ ++A+RFL   + +G+ P    + ++I    +   T   E     ++E G+K
Sbjct: 264 RGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIK 323

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    Y+ ++  +   G + + E +  +M ++ + PD   YS+L   Y  AG+ + A  +
Sbjct: 324 PDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEAL 383

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L  M     + N  I++ I++G+   G+     ++ ++M   G   +   Y  +I  +G+
Sbjct: 384 LNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGE 443

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTIT 477
                 A      M   G+ P+  T
Sbjct: 444 AKQPWKAEELLVTMEESGVAPEMST 468



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 173/366 (47%), Gaps = 20/366 (5%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSK 218
           +L++ +I+A   S K++EA  + ++ +      T  T+N LI          +A+ L+  
Sbjct: 114 ILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEM 173

Query: 219 MRQDG-YHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           M QDG    +   Y+++IQ+    N+++ +  ++ K+        ++ D    N +   F
Sbjct: 174 MIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVN----SGMQPDIVTYNTLARAF 229

Query: 276 AKAGDASKAMRF-LGMAQ-GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           A+ G+   A R  L M Q    + P   T   +I      G   EA     ++KE G+ P
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHP 289

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               +N+L+KGY+ +      E  ++ ME  G+ PD  TYS +++A++++G  ++   + 
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF--- 450
            +M  +  +P+   YS +  GY   G+  +   +L  M   G++ +   +  +I  +   
Sbjct: 350 DDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAA 409

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
           GK +C   A+  +++M   G   +  T+ TLI  + +  +  +AEEL   M+E G  P  
Sbjct: 410 GKMDC---ALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEM 466

Query: 511 TTYNIM 516
           +T  ++
Sbjct: 467 STIELV 472



 Score = 40.0 bits (92), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 40/81 (49%)

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           +G   +AV  F  +  +G KP+ +   +L+ A    +R     ++L  ++ENG+KPD + 
Sbjct: 56  KGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSIL 115

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           +  ++ A     K H+    +
Sbjct: 116 FNAMINAFSDSGKVHEAMKIF 136


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 226/497 (45%), Gaps = 37/497 (7%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            +H L ++ +  EA  L +++  +L  + Y  +IS        E+A++ +S+MR      
Sbjct: 273 FVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + + Y +++    R  ++     +++   +  +      ++ N +I  + ++GD S A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRC--KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGR-----TIE-AEAVFEELKESGLKPRTKAYNA 340
            L      G  P    Y  +I  +  + +      +E AE  + E+ ++ +       + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L +     G  + A  ++ EM   G +PD  TYS +I    NA + ++A ++ +EM+ +H
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ F Y+ ++  +   G  Q+  +   EM   G  P+   Y  +I  + K   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG-------YF------ 507
             F+ MLSEG  P+ +T+  LID H K G+ ++A +++  M+          YF      
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 508 ---PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  +++ L +  + ++ + LL  M  +G  PN + Y  L+D + + G+ D+A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    Q V  F  M   G  P+    +SLI+   +D+R   A  VL  M EN   P
Sbjct: 691 ---------QMV--FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739

Query: 625 DVVTYTTLMKALIRVDK 641
           +V+ YT ++  L +V K
Sbjct: 740 NVIIYTEMIDGLCKVGK 756



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 225/546 (41%), Gaps = 84/546 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           L+++ +  LGR + L          + + LTYNAL+      D L+ A  +  +M   G+
Sbjct: 212 LWNVALEELGRLKDL--------GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           + D       +  L +  +   +L       IE ++ +LD  +   +I G  +A    +A
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREAL-----ALIEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           M FL   +     P   TY  ++       +    + +   +   G  P  + +N+L+  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI--------------------------D 378
           Y + G    A  ++ +M   G  P    Y++LI                          D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 379 AY---------------ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           A+                 AG++E A  +++EM      P++  YS+++    +  +   
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F + +EMKS+ V PD   Y ++ID+F K   L  A   FD M+ +G  P+ +T+  LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL- 542
            + K  +   A ELFE M   G  P   TY  +I+   +  + E   ++   MR    + 
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 543 ---------------PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
                          PN+ TY  LVD   ++ +  +A + L+           VM  +G 
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD-----------VMSVEGC 667

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
           +P+++  ++LI+ F +  +  EA  V   M E G  P+V TY++L+  L    R+D   K
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 645 VFSSYL 650
           V S  L
Sbjct: 728 VLSRML 733



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 228/509 (44%), Gaps = 48/509 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+  AFLL +  +   + P   TY  LI +  +   L++A     +M 
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   + + Y+ +I +  +  K+ S+   +L++ +  +    +      +I G  K+G 
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSA--NELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA +     +G                    P   TY A++  L  + +  EA  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +   G +P    Y+AL+ G+ K+G L +A+ V ++M   G  P+ +TYS LID      
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL  M  +   PN  IY+ ++ G    G+    ++++  M+  G  P+   Y 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID FGK   +   +    +M ++G  P+ +T+  LI+     G  D A +L +EM++ 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR-------LLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            Y+P         ++ G ++  E   R       LL  +     +P +  Y  L+D + +
Sbjct: 841 -YWP--------KHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR + A+E  + +S  +  ++     D         +SLI +     +  +AF +   M
Sbjct: 892 AGRLELALELHKEMS--SCTSYSAADKD-------LYSSLIESLSLASKVDKAFELYADM 942

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + G  P++  +  L+K LIR++++ +  
Sbjct: 943 IKRGGIPELSIFFYLVKGLIRINRWEEAL 971



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 188/438 (42%), Gaps = 49/438 (11%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++  +EI  +  E+ G+LLN +I    + G  + A+  LG  + +G  P   TY A++  
Sbjct: 182 EQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRV 241

Query: 310 LSNSGRTIEAEAVFEELKESG--------------------------------LKPRTKA 337
              + R   A  V  E+ +SG                                 K  T  
Sbjct: 242 FLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVI 301

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  ++ G  +    ++A   +S M  S  +P+  TY +L+       +    + +L  M 
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMI 361

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI------DTFG 451
                P+  I++ ++  Y   G++   +++LK+M   G +P    YN++I      +   
Sbjct: 362 TEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP 421

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
             + L  A  A+  ML   +  + +  + L  C    G++++A  +  EM  +G+ P T+
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY+ +I LL    + ++   L   M++  ++P+V TYT L+D +           C  GL
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF-----------CKVGL 530

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             QA   F  M  DG  P+ +   +LI+A+ + ++ + A  + + M   G  P+VVTYT 
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+    +  +  K    Y
Sbjct: 591 LIDGHCKSGQIEKACQIY 608



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/506 (22%), Positives = 208/506 (41%), Gaps = 69/506 (13%)

Query: 89  NFLSENSNSESASALASSPSSLNR--VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLA 146
            F+ + S       L  + S ++   + F+  +S   VP    +++L +   S   + L 
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID---SFCKVGLL 531

Query: 147 YAVVSWLQK--HNLCYSYELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNAL 199
                W  +   + C    + Y+ LIHA  ++ K+  A      +LS+      +TY AL
Sbjct: 532 QQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591

Query: 200 ISACARNDDLEKALNLMSKMR--------------QDGYHCD--FINYSLVIQSLTRTNK 243
           I    ++  +EKA  + ++MR               DG   D     Y  ++  L + +K
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTAT 302
           +  +  + L   +  +  E +  + + +I GF K G   +A M F  M++  G  P   T
Sbjct: 652 VKEA--RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSER-GYGPNVYT 708

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y+++I  L    R   A  V   + E+   P    Y  ++ G  K+G   +A  ++S ME
Sbjct: 709 YSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME 768

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL---------- 412
             G  P+  TY+ +ID +  AG+ +    ++++M      PN F+  R+L          
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN-FVTYRVLINHCCAAGLL 827

Query: 413 -------------------AGYRDRGE-WQRTFQV----LKEMKSSGVEPDTHFYNVMID 448
                              AGYR   E + R F +    L E+  +   P    Y ++ID
Sbjct: 828 DDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILID 887

Query: 449 TFGKYNCLHHAMAAFDRM--LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           +F K   L  A+     M   +     D   +++LI+      + D+A EL+ +M +RG 
Sbjct: 888 SFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGG 947

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRL 532
            P  + +  ++  L    RWE+  +L
Sbjct: 948 IPELSIFFYLVKGLIRINRWEEALQL 973


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 14/416 (3%)

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +MR  G+  D   + +V+++  +    D ++  +L+ E+   +IE D ++ +  I    K
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAV--RLFDEMPASEIEPDQRVCSVAIASLCK 224

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             DA++A+  L   Q  G  P   T+ +V+  L   GR  EA  + +EL  +G K     
Sbjct: 225 LRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVL 284

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
              L+ GY     ++ A  +  E  R G++P + TY++LI      G  E A  + ++M 
Sbjct: 285 ATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMR 344

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P++  ++ ++ G  +   W+    + KEM  SG+ PD   YN++I    +   + 
Sbjct: 345 DHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIR 403

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +++M   G++P  +T+++L+ C+   G  D A +L+ EM  +G+ P   TY  ++
Sbjct: 404 EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                +  ++    LL  M+  G+  N  TY TL++     GR  +  E L         
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML--------- 514

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             +   T+G  P+ +  NS+IN F +      AFAV Q M   G+ P++VTYT+ +
Sbjct: 515 --KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 196/445 (44%), Gaps = 7/445 (1%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +++L   C+     + AY +   ++ H L  S    ++++I  L   +   +A 
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE-FNMVIKGLLNDKLWKDAV 372

Query: 184 LLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            L +    + +    TYN LI    +   + +ALNL  KM + G     + Y  ++    
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
               +D ++  KLY E+       +      ++ G        KA   L   +  G+S  
Sbjct: 433 VNGCMDEAV--KLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I  L   GR  E   + +  +  G  P    YN+++ G++K G +  A  V  
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M   G+ P+  TY+  ID Y      + A  +L ++     +P+   Y+ ++ G+   G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEG 610

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 QVL  M   G+ P+   YN  I  +     +  A+  +++M+ EGI+ DT T+ 
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYT 670

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID   K G    A +L+ EM  +G  P   T+  + + L      +D ++LL  M   
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDA 564
            + PNV+ Y  L++ Y ++G+  +A
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEA 755



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 211/504 (41%), Gaps = 34/504 (6%)

Query: 164 LLYSILIHA--LGRS-EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           +L + L+H   L R   K  + F  + R  L P  +TY  LI  C      EKA  L  +
Sbjct: 283 VLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR  G       +++VI+ L        ++   L+KE+    I  D    N +I    + 
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAV--SLFKEMADSGIP-DAFTYNILIHWLCQR 399

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+         G+ P   TY +++     +G   EA  ++ E+   G  P    Y
Sbjct: 400 RKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+KG++       A  +++EM+++GV  +++TY+ LI+     GR      +LK  E 
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P +  Y+ I+ G+   G     F V ++M + G+ P+   Y   ID + K +C   
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+   + +  +G+ PD   +N+LI    + G    A ++   M + G  P  + YN  I 
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
                +  E+  R    M  +G+  +  TYTTL+D + + G    A++            
Sbjct: 640 GYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  G  D A      M    ++P+ L  N LIN +  + +  EAF + 
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLH 759

Query: 615 QYMKENGLKPDVVTYTTL--MKAL 636
             M E  + PD  TY  L  MK+L
Sbjct: 760 DEMLERKIMPDDTTYDILVGMKSL 783



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 12/354 (3%)

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +G G       +  V+ A    G   +A  +F+E+  S ++P  +  +  +    K+   
Sbjct: 169 RGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDA 228

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  V+ +M+ +G +P + T++ ++D     GR E A  +  E+  +  K +  + + +
Sbjct: 229 NRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTL 288

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  + E ++   + +E    G+ P    Y V+I    +      A     +M   G+
Sbjct: 289 MHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGL 348

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P T  +N +I        +  A  LF+EM + G  P   TYNI+I+ L ++ +  +   
Sbjct: 349 LPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALN 407

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M   G+ P +VTY +L+  Y           C+ G  D+AV  +  M   G  P+ 
Sbjct: 408 LWEKMNETGVKPYIVTYHSLLLCY-----------CVNGCMDEAVKLYTEMPGKGFTPNV 456

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +   +L+          +A+A+L  MK+NG+  +  TY TL+  L  V +  +V
Sbjct: 457 VTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEV 510



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 12/353 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P   +   ++   + S    +A A+  E++  G       ++ +++   K G   DA
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM  S + PD+   S+ I +         A +VL++M+ +   P  F ++ ++  
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G  +    +  E+ ++G +        ++  +     +  A+  F+  L +G+ P 
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  LI    + G  ++A EL  +M++ G  P T  +N++I  L   + W+D   L  
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G +P+  TY  L+    Q  +  +A+           N +  M   G+KP  +  
Sbjct: 377 EMADSG-IPDAFTYNILIHWLCQRRKIREAL-----------NLWEKMNETGVKPYIVTY 424

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +SL+  +  +    EA  +   M   G  P+VVTYTTLMK  I    F K ++
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 220/492 (44%), Gaps = 40/492 (8%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQ 250
           P  YN LI A  R + +   + +   MR+DG H +   Y+L++++L + N++ ++  +L 
Sbjct: 128 PRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLD 187

Query: 251 KLYKE--------------IEC--DKIELDGQLL----------NDVIVGFAKAGDASKA 284
           ++ ++              + C  D+++   ++L          N +++   +     + 
Sbjct: 188 EMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEV 247

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              +    G GL P   TY  ++ A   +G    A A+   +  +G  P    + AL++G
Sbjct: 248 FSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRG 307

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
               G + DA  +   M   G  P   +Y++LI    + G  + A  +L  ME     PN
Sbjct: 308 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 367

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              YS ++ G+   G+      +  +M  SG +P+   Y  M+D F K    + A +  D
Sbjct: 368 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 427

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           +ML E   P+T+T+NTLI     C R  RA  +F EM+  G  P   TYN +I+ L  + 
Sbjct: 428 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 487

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
              D   ++  M++ G+  ++VTY T+V     SG       C   +S +A+     M  
Sbjct: 488 NCGDALHMVTEMQSHGIELSLVTYNTVV-----SGL------CQTRMSREAMVFVGKMIV 536

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G++P+    +++I+A+ ++     A  +L  M       +++ YT LM  L   DK   
Sbjct: 537 QGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVD 596

Query: 645 VFSSYLFFNIYK 656
              +YL   +Y+
Sbjct: 597 AM-TYLLKMLYE 607



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 181/431 (41%), Gaps = 34/431 (7%)

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQG 293
           ++ L     +D   +Q   +E+    +      L   +  FA+AG   +A++ F      
Sbjct: 62  VRRLAAAGDVDG--VQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 119

Query: 294 VGLSPKTAT--YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +G +  T    Y  +I AL           V++ +++ G+ P    YN L++   +   +
Sbjct: 120 LGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 179

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  ++ EM R G  PD+ TY+ ++       R + A  VL  M      P +  Y+ I
Sbjct: 180 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAI 234

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +         Q  F V+ +M   G++P+   Y  ++D F K   L  A A   RM+  G 
Sbjct: 235 VLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGC 294

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+ +T+  L+   F  GR   A +++  M   G+ P T +YNI+I  L      +    
Sbjct: 295 TPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASS 354

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
           +L +M   G  PNV TY+TL+D + ++G    AI                         C
Sbjct: 355 ILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFC 414

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
            + + +QA +    M  +   P+ +  N+LI +  + +R   A  V   M+ +G  P+  
Sbjct: 415 KKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 474

Query: 628 TYTTLMKALIR 638
           TY  L+  L R
Sbjct: 475 TYNELIHGLFR 485



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 151/394 (38%), Gaps = 83/394 (21%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G     +A+ A ++     G +   +  + EM   GV   E      + A+A AG  + A
Sbjct: 50  GTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRA 109

Query: 390 RIVLKEM-----EVSHAKPN-SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
              LK       ++  A+P    +Y+ ++              V   M+  GV P+   Y
Sbjct: 110 ---LKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTY 166

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N+++    + N +  A    D M  +G  PD +T+ T++    K  R D A E+   M  
Sbjct: 167 NLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP- 225

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P   +YN ++  L  + R ++V  ++ +M  +GL PNV+TYTT+VD + ++G    
Sbjct: 226 ----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281

Query: 564 AIECL-------------------EGLSDQ-----AVNAFRVMRTDGLKPSNLALN---- 595
           A   L                    GL D      A++ +R M  +G  PS ++ N    
Sbjct: 282 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 341

Query: 596 -------------------------------SLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                                          +LI+ F +      A ++   M  +G KP
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401

Query: 625 DVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKML 658
           +VV YT ++           VF   L FN  K L
Sbjct: 402 NVVVYTNMV----------DVFCKKLMFNQAKSL 425


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 239/556 (42%), Gaps = 38/556 (6%)

Query: 111 NRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           N   F++ + +      L   LL  + S  SS +  +   S +   N+C+   L   I+ 
Sbjct: 10  NLKAFRMVQPHLLKTGTLRTDLLCTISSFLSSCERDF---SSITNGNVCFRERLRSGIVD 66

Query: 171 HALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
                +  L++  +   R R  P  + ++   SA AR       L+   ++  +G   + 
Sbjct: 67  IKKDDAIALFQEMI---RSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI 123

Query: 229 INYSLVIQSLTRTNK--IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
              +++I    R  K     S+L K+ K       E D    N +I G    G  SKA+ 
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKL----GYEPDTTTFNTLINGLCLEGKVSKAVV 179

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            +      G  P   TY +++  +  SG T  A  +  +++E  +K     Y+ ++    
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G +  A  +  EME  G+     TY+ L+     AG+W    ++LK+M      PN  
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ +L  +   G+ Q   ++ KEM + G+ P+   YN ++D +   N L  A    D M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +     PD +T+ +LI  +    R D   ++F  + +RG      TY+I++    +  + 
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
           +  + L   M + G+LP+V+TY  L+D    +G+ + A+E                    
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C  G  + A N F  +   G+KP+ +    +I+   +    +EA  +L+ M+E+G 
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 623 KPDVVTYTTLMKALIR 638
            P+  TY TL++A +R
Sbjct: 540 APNDCTYNTLIRAHLR 555



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 191/422 (45%), Gaps = 14/422 (3%)

Query: 146 AYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYN 197
           AY+V+  + K      YE     ++ LI+ L    K+ +A +L  R       P  +TYN
Sbjct: 142 AYSVLGKVMK----LGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYN 197

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           ++++   R+ D   A +++ KM +     D   YS +I SL R   ID+++   L+KE+E
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEME 255

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I+      N ++ G  KAG  +     L       + P   T+  ++      G+  
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +++E+   G+ P    YN L+ GY     L +A  ++  M R+   PD  T++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             Y    R +    V + +       N+  YS ++ G+   G+ +   ++ +EM S GV 
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y +++D       L  A+  F+ +    ++   + + T+I+   K G+ + A  L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F  +  +G  P   TY +MI+ L ++    +   LL  M   G  PN  TY TL+  + +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 558 SG 559
            G
Sbjct: 556 DG 557



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 217/476 (45%), Gaps = 18/476 (3%)

Query: 167 SILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +I+I+   R  K   A+ +L +  +L       T+N LI+       + KA+ L+ +M +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE 186

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G   D + Y+ ++  + R+   D+SL   + +++E   ++ D    + +I    + G  
Sbjct: 187 NGCQPDMVTYNSIVNGICRSG--DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             A+      +  G+     TY +++  L  +G+  +   + +++    + P    +N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L  +VK G L++A  +  EM   G+ P+  TY+ L+D Y    R   A  +L  M  +  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   ++ ++ GY          +V + +   G+  +   Y++++  F +   +  A  
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M+S G+ PD +T+  L+D     G+ ++A E+FE++Q+         Y  +I  + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  + ED   L  ++  +G+ PNV+TYT ++     SG       C +G   +A    R 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-----SGL------CKKGSLSEANILLRK 533

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           M  DG  P++   N+LI A   D     +  +++ MK  G   D  +   ++  L+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 187/404 (46%), Gaps = 11/404 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           ++S++  +C S  +  LA+ ++  +++ N+  +    YS +I +L R   +  A  L   
Sbjct: 196 YNSIVNGICRSGDT-SLAFDMLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             ++  + + +TYN+L+    +         L+  M       + I +++++    +  K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +   +LYKE+    I  +    N ++ G+      S+A   L +      SP   T+
Sbjct: 314 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I       R  +   VF  + + GL      Y+ L++G+ + G +K AE +  EM  
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GVLPD  TY +L+D   + G+ E A  + ++++ S       +Y+ I+ G    G+ + 
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+P+   Y VMI    K   L  A     +M  +G  P+  T+NTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQER 525
            H + G    + +L EEM+  G+    ++  ++I++L  GE ++
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595


>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 200/443 (45%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           RL   TY  ++ A  R+ ++ K   +  +MR+ GY  D   Y++++ +L ++  +D +  
Sbjct: 183 RLNGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQA-- 240

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +++++++    E D      +I    +AG ASK + F       G +     Y  +I A
Sbjct: 241 YQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEA 300

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +    +   V  ++ E G +P    Y+  L    K G L     V+   +R     +
Sbjct: 301 LGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDR---YMN 357

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +  YS L+ + + +G    A  V  +M  S+   +   +  +L    + G+      +L 
Sbjct: 358 KSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLH 417

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   GV  D   YN++    GK   +    + FD+M + GI PD  T+N +I  + + G
Sbjct: 418 MMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVG 477

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A  LFE+M      P   TYN +IN LG+    ++   L   M+ +G  P+V TY+
Sbjct: 478 LVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYS 537

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++ +G+S +            D A N F  M  +G  P+ +  N L++      + AE
Sbjct: 538 ILIECFGKSNKV-----------DMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAE 586

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
           A    + MK+ GL PD +T + L
Sbjct: 587 AHKHYETMKQQGLTPDSITCSIL 609



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 205/412 (49%), Gaps = 21/412 (5%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----L 184
           +++L +  + +  +D AY V   + K   C      Y+ILI   GR+ K  +       +
Sbjct: 224 YNMLLDALAKSGMVDQAYQVFEDM-KQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEM 282

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +S+   L  + YN LI A  +N  ++K + ++SKM + G   +   YS+ +  L +  + 
Sbjct: 283 VSKGCALNLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQ- 341

Query: 245 DSSLLQKLYKEIE-CDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
               L +L + ++ CD+  ++  + + ++   +K+G  S+A   F  M        + A 
Sbjct: 342 ----LHRLNEVLDICDRY-MNKSIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDA- 395

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS--- 359
           + +++  L NSG+T+EA  +   + E G+      YN +   +  +G LK   F+ S   
Sbjct: 396 FVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMV---FSALGKLKQVSFITSLFD 452

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M+ +G+ PD  TY+++I +Y   G  + A  + ++M  S  KP+   Y+ ++      G
Sbjct: 453 KMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNG 512

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +      + KEM+  G  PD   Y+++I+ FGK N +  A   F  M++EG  P+ +T+N
Sbjct: 513 DLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYN 572

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            L+DC  + G+   A + +E M+++G  P + T +I+  L    +R   +++
Sbjct: 573 ILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSILERLESRSQRTVRIRK 624



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/399 (19%), Positives = 169/399 (42%), Gaps = 33/399 (8%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F    D S+A+R +   +  G+S   +T   ++          +     E   + GL+  
Sbjct: 129 FRTRADPSEALRIVSEMERDGVSGNISTVNLLVGIGGGGVEVTKC---LELAMKWGLRLN 185

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              Y  +L+ +++   +     V  EM R G + D   Y++L+DA A +G  + A  V +
Sbjct: 186 GYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFE 245

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +M+  + +P+++ Y+ ++      G+  +      EM S G   +   YN +I+  GK  
Sbjct: 246 DMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNK 305

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +   +    +M+  G +P+  T++  +D   K G+  R  E+ +       +   + Y+
Sbjct: 306 MVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDR---YMNKSIYS 362

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
            ++  L +     +   +   M       +   + +++++   SG+  +AI+ L  + ++
Sbjct: 363 YLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEK 422

Query: 575 AV------------------------NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
            V                        + F  M+ +G+ P     N +I+++G      +A
Sbjct: 423 GVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKA 482

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
             + + M  +  KPDV+TY +L+  L +   +D+ H +F
Sbjct: 483 SGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLF 521



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 30/317 (9%)

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA---KPNSFIYSRILA 413
           +VSEMER GV  +  T +LL+              V K +E++     + N + Y  IL 
Sbjct: 141 IVSEMERDGVSGNISTVNLLVGIGG------GGVEVTKCLELAMKWGLRLNGYTYKCILQ 194

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
            +    E  + F+V +EM+  G   D   YN+++D   K   +  A   F+ M  +  EP
Sbjct: 195 AHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKYCEP 254

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+  LI    + G+  +    F+EM  +G       YN +I  LG+ +  + V  +L
Sbjct: 255 DAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVIFVL 314

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSG---RFDDAIECLEGLSDQAVNAFRVM---RTDGL 587
             M   G  PN  TY+  +DI  + G   R ++ ++  +   ++++ ++ V    ++  +
Sbjct: 315 SKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHV 374

Query: 588 KPSNLALNSLINAFGEDQRDA---------------EAFAVLQYMKENGLKPDVVTYTTL 632
             ++     + N++    RDA               EA  +L  M E G+  DV  Y  +
Sbjct: 375 SEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMV 434

Query: 633 MKALIRVDKFHKVFSSY 649
             AL ++ +   + S +
Sbjct: 435 FSALGKLKQVSFITSLF 451


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 211/445 (47%), Gaps = 14/445 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           +A+I+A  ++  LE++L+    M   G+     +++  +  L ++  +D +     + E 
Sbjct: 42  DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTW--GFFTEY 99

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
              + + D       I  F + G+ SK    L   + +G+SP    Y  +I A   +G  
Sbjct: 100 -LGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDI 158

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A+ +F  + + GL      Y  ++ G+ K GY KD   +  +M+  GVLP+ +TY+ L
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  Y   G+   A  V  E+       N+  Y+ ++ G   +G+  +   +L+ MK + +
Sbjct: 219 ITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI 278

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            P T  +N+++D       L  A++  +++   G+ P  +T+N LI    K G      E
Sbjct: 279 NPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSE 338

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L  EM++RG  P   TY I++N     +  E    +   M+  GL+P+  TY  L  I+G
Sbjct: 339 LVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVL--IHG 396

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C++G   +A   ++ M    L+P+++  N++IN + ++    +A   L+ 
Sbjct: 397 L---------CIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEE 447

Query: 617 MKENGLKPDVVTYTTLMKALIRVDK 641
           M +NG+ P+V +Y + ++ L +  K
Sbjct: 448 MVKNGVTPNVASYISTIQILCKDGK 472



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 178/382 (46%), Gaps = 9/382 (2%)

Query: 168 ILIHALGRSEKLYEAF-LLSQRQRL--TP--LTYNALISACARNDDLEKALNLMSKMRQD 222
           I I A   +  + + F LL+Q + +  +P    Y  LI AC RN D+++A  + S+M   
Sbjct: 112 ITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDL 171

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   +   Y+++I    +          +LY++++   +  +    N +I  + + G  S
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGF--ELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
            A +        G++    TY  +I  L   G+  +AE + E +K + + P T+ +N L+
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G    G L  A   + +++  G+ P   TY++LI  ++  G       +++EME     
Sbjct: 290 DGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGIS 349

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+   Y+ ++  +    + ++ +++   MK  G+ PD H Y V+I        +  A   
Sbjct: 350 PSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFK-CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
           +  M+   ++P+ + +NT+I+ + K C  Y +A +  EEM + G  P   +Y   I +L 
Sbjct: 410 YKSMVEMHLQPNDVIYNTMINGYCKECNSY-KALKFLEEMVKNGVTPNVASYISTIQILC 468

Query: 522 EQERWEDVKRLLGNMRAQGLLP 543
           +  +  + KRLL  M   GL P
Sbjct: 469 KDGKSIEAKRLLKEMTEAGLKP 490



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 9/288 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++SL+   C  +  + LA+ V   + K  +  +  + Y+ILI  L R  ++ +A  L +R
Sbjct: 215 YNSLITEYCR-DGKLSLAFKVFDEISKRGVACN-AVTYNILIGGLCRKGQVSKAEGLLER 272

Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +      T  T+N L+        L+KAL+ + K++  G     + Y+++I   ++   
Sbjct: 273 MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVG- 331

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +SS++ +L +E+E   I         ++  F ++ D  KA     + + +GL P   TY
Sbjct: 332 -NSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTY 390

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G  +EA  +++ + E  L+P    YN ++ GY K      A   + EM +
Sbjct: 391 GVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK 450

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           +GV P+  +Y   I      G+   A+ +LKEM  +  KP   + S++
Sbjct: 451 NGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLCSKV 498



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 76/194 (39%), Gaps = 12/194 (6%)

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  ++  F  M+ +G  P + ++N  +D   K G  DR    F E   R  F    ++ I
Sbjct: 54  LEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFD-VYSFWI 112

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            I    E         LL  M   G+ PNV  YT L++             C  G  DQA
Sbjct: 113 TIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEAC-----------CRNGDIDQA 161

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M   GL  +      +IN F +     + F + Q MK  G+ P++ TY +L+  
Sbjct: 162 KVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITE 221

Query: 636 LIRVDKFHKVFSSY 649
             R  K    F  +
Sbjct: 222 YCRDGKLSLAFKVF 235


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 203/462 (43%), Gaps = 22/462 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+  LI+   +  ++++A +L   M Q G   D I YS +I    +   +   +  KL+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML--GMGHKLF 344

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +     ++LD  + +  I  + K+GD + A          G+SP   TY  +I  L   
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  EA  ++ ++ + G++P    Y++L+ G+ K G L+    +  +M + G  PD   Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
            +L+D  +  G    A     +M     + N  +++ ++ G+     +    +V + M  
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524

Query: 434 SGVEPDTHFY------NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            G++PD   +      ++M D F K+      +  FD M    I  D    N +I   FK
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 584

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           C R + A + F  + E    P   TYN MI       R ++ +R+   ++     PN VT
Sbjct: 585 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
            T L+ +            C     D A+  F +M   G KP+ +    L++ F +    
Sbjct: 645 LTILIHVL-----------CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
             +F + + M+E G+ P +V+Y+ ++  L    RVD+   +F
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/464 (23%), Positives = 199/464 (42%), Gaps = 28/464 (6%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE- 255
           L+  C R   ++KAL +     Q G      +   ++ SL  ++++D  +    KL +  
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           IE   +   G +L+ +   F K G+ +KA+ F  +    G      +   V+  LS    
Sbjct: 212 IEPSGVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI 267

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            + A  +   + + G  P    +  L+ G+ K G +  A  +   ME+ G+ PD   YS 
Sbjct: 268 EV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LID Y  AG       +  +      K +  ++S  +  Y   G+      V K M   G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y ++I    +   ++ A   + ++L  G+EP  +T+++LID   KCG      
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L+E+M + GY P    Y ++++ L +Q       R    M  Q +  NVV + +L+D +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI------NAFGEDQRDAE 609
            +  RFD+A++            FR+M   G+KP      +++      +AF +  +   
Sbjct: 507 CRLNRFDEALK-----------VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
              +   M+ N +  D+     ++  L    K H++  +  FFN
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLF---KCHRIEDASKFFN 596



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 203/466 (43%), Gaps = 60/466 (12%)

Query: 144 DLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLT 195
           DLA A V +  K  LC       + Y+ILI  L +  ++YEAF     +L +    + +T
Sbjct: 371 DLATASVVY--KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y++LI    +  +L     L   M + GY  D + Y +++  L++   +  ++  +   +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM--RFSVK 486

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    I L+  + N +I G+ +     +A++   +    G+ P  AT+  V+        
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV------ 540

Query: 316 TIEAEAVFEELKES-GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +I  +A  + +K + GL+                        +   M+R+ +  D    +
Sbjct: 541 SIMEDAFCKHMKPTIGLQ------------------------LFDLMQRNKISADIAVCN 576

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEM 431
           ++I       R E A      +     +P+   Y+ ++ GY   R   E +R F++LK  
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK-- 634

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
             +   P+T    ++I    K N +  A+  F  M  +G +P+ +T+  L+D   K    
Sbjct: 635 -VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + + +LFEEMQE+G  P   +Y+I+I+ L ++ R ++   +        LLP+VV Y  L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           +  Y + GR  +A    E            M  +G+KP +L   +L
Sbjct: 754 IRGYCKVGRLVEAALLYEH-----------MLRNGVKPDDLLQRAL 788


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 190/391 (48%), Gaps = 22/391 (5%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL---SNSGRTIEAEAVF 323
           L +  +  +  AG    A++       + L P   T   ++  L    +S     A  VF
Sbjct: 133 LFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVF 192

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDA----EFVVSEMERSGVLPDEHTYSLLIDA 379
           +++ + G+    K +N L+ GY   G L+DA    E +VSE     V PD  TY+ ++ A
Sbjct: 193 DDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEF---NVNPDNVTYNTILKA 249

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            +  GR    + +L +M+ +   PN   Y+ ++ GY   G  +  FQ+++ MK + + PD
Sbjct: 250 MSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD 309

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN++I+       +   +   D M S  ++PD +T+NTLID  F+ G    A++L E
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLME 369

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQS 558
           +M+  G  P   T+NI +  L ++E+ E+V R +  +    G  P++VTY TL+  Y + 
Sbjct: 370 QMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKV 429

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G    A+E +           R M   G+K + + LN++++A  ++++  EA  +L    
Sbjct: 430 GDLSGALEMM-----------REMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAH 478

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + G   D VTY TL+    R +K  K F  +
Sbjct: 479 KRGYIVDEVTYGTLIMGYFREEKVEKAFEMW 509



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 229/474 (48%), Gaps = 29/474 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           T+N L++       LE AL ++ +M  +   + D + Y+ +++++++  ++  S ++ L 
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRL--SDVKDLL 263

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +++ + +  +    N+++ G+ K G   +A + + + +   + P   TY  +I  + N+
Sbjct: 264 LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNA 323

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   E   + + +K   L+P    YN L+ G  ++G   +A+ ++ +ME  GV P++ T+
Sbjct: 324 GSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTH 383

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ +       + E     +KE+   H   P+   Y  ++  Y   G+     ++++EM 
Sbjct: 384 NISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G++ +T   N ++D   K   +  A    D     G   D +T+ TLI  +F+  + +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVE 503

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A E+++EM+     P  TT+N +I  L    + E        +   GLLP+  T+ +++
Sbjct: 504 KAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSII 563

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
             Y + GR + A E                        C EG++++A+N F  + T+  +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-E 622

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              +  N++I+AF +D++  EA+ +L  M+E  L+PD  TY +++ +L+   K 
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKL 676



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 196/423 (46%), Gaps = 37/423 (8%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           + LD +  N ++ G+   G    A+  L  M     ++P   TY  ++ A+S  GR  + 
Sbjct: 200 VSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDV 259

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +  ++K +GL P    YN L+ GY K+G LK+A  +V  M+++ +LPD  TY++LI+ 
Sbjct: 260 KDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILING 319

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
             NAG       ++  M+    +P+   Y+ ++ G  + G      +++++M++ GV+P+
Sbjct: 320 VCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPN 379

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSE-----GIEPDTITWNTLIDCHFKCGRYDRA 494
              +N+ +    K+ C         R + E     G  PD +T++TLI  + K G    A
Sbjct: 380 QVTHNISL----KWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGA 435

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+  EM ++G    T T N +++ L ++ + ++   LL +   +G + + VTY TL+  
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMG 495

Query: 555 YGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           Y +  + + A E                        C  G ++ A+  F  +   GL P 
Sbjct: 496 YFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +   NS+I  + ++ R  +AF       ++  KPD  T   L+  L +     K  +   
Sbjct: 556 DCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN--- 612

Query: 651 FFN 653
           FFN
Sbjct: 613 FFN 615



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 203/456 (44%), Gaps = 20/456 (4%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A+   GR   + +  L  +R  L P  +TYN L+    +   L++A  ++  M+
Sbjct: 243 YNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     D   Y+++I  +     I   L  +L   ++  K++ D    N +I G  + G 
Sbjct: 303 QTNILPDLCTYNILINGVCNAGSIREGL--ELMDVMKSLKLQPDVVTYNTLIDGCFELGL 360

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE-SGLKPRTKAYN 339
           + +A + +   +  G+ P   T+   +  L    +  E     +EL E  G  P    Y+
Sbjct: 361 SLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH 420

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+K Y+K+G L  A  ++ EM + G+  +  T + ++DA     + + A  +L      
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
               +   Y  ++ GY    + ++ F++  EMK   + P    +N +I     +     A
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA 540

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           M  FD +   G+ PD  T+N++I  + K GR ++A E + E  +  + P   T NI++N 
Sbjct: 541 MEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L ++   E        +  +  + + VTY T++  + +  +  +A + L  + ++     
Sbjct: 601 LCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKR---- 655

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                  L+P     NS+I +  ED + +EA  +L+
Sbjct: 656 -------LEPDRFTYNSIITSLMEDGKLSEADELLK 684



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 168/400 (42%), Gaps = 45/400 (11%)

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLS---QRQRLTP--LTY 196
           S+  A+ +V  +++ N+       Y+ILI+ +  +  + E   L    +  +L P  +TY
Sbjct: 290 SLKEAFQIVELMKQTNILPDL-CTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTY 348

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N LI  C       +A  LM +M  DG   + + +++ ++ L +  K +  + +K+ + +
Sbjct: 349 NTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREE-VTRKVKELV 407

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E      D    + +I  + K GD S A+  +      G+   T T   ++ AL    + 
Sbjct: 408 EMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKV 467

Query: 317 IEA--------------------------------EAVFE---ELKESGLKPRTKAYNAL 341
            EA                                E  FE   E+K   + P    +N+L
Sbjct: 468 DEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSL 527

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G    G  + A     E+  SG+LPD+ T++ +I  Y   GR E A     E  + H+
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE-SIKHS 586

Query: 402 -KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+++  + +L G    G  ++       + +   E DT  YN MI  F K   L  A 
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAY 645

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
                M  + +EPD  T+N++I    + G+   A+EL ++
Sbjct: 646 DLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 218/519 (42%), Gaps = 53/519 (10%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++AL  S K  EA   FL  +   L+P   TYN LI    R    +KA  L++ M 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D  +Y  +I SL +   +  +L  KL+ E+    +  D    N +I GF K GD
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDAL--KLFDEMPERGVTPDVACYNILIDGFFKKGD 234

Query: 281 ASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              A      + +G  + P   +Y  +I  L   G+  E+  ++  +K++        Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G    G L  A  V  EM  +GV PD   Y+ +++ Y  AGR E    + K ME  
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354

Query: 400 HAK----------------------------------PNSFIYSRILAGYRDRGEWQRTF 425
             +                                   +S  Y  ++ G    G   +  
Sbjct: 355 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L+E ++   + DT  Y+ MI+   +   L       D+M   G +P+    N +I+  
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +  + + A   F  M  +G FP   TYN +IN L + ER+ +   L+  M  +G  PN+
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +TY+ L++   Q  + D            A+N +      G KP     N +I+      
Sbjct: 535 ITYSLLMNGLCQGKKLD-----------MALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  +A  +   MK+    P++VT+ TLM+   +V  F +
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 192/444 (43%), Gaps = 37/444 (8%)

Query: 234 VIQSLTRTNKIDSSL--LQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           VI++  + +  D +L   Q++++   C   I     LLN +I    ++    +A  F   
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI----ESNKWDEAESFFLY 139

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            + +GLSP   TY  +I       +  +A+ +   + E G  P   +Y  L+    K GY
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYS 409
           + DA  +  EM   GV PD   Y++LID +   G    ++ I  + ++     PN   Y+
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G++  +F++   MK +    D + Y+ +I        L  A   +  M   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT--TYNIMINLLGEQERWE 527
           G+ PD + +NT+++ + + GR +   EL++ M++ G   C T  +YNI+I  L E  + +
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CRTVVSYNILIRGLFENAKVD 376

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------------- 566
           +   +   +  +    + +TY  LV    ++G  + A+                      
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436

Query: 567 ---CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
              C EG  D+       M   G KP+    N++IN F    +  +A      M   G  
Sbjct: 437 NGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF 496

Query: 624 PDVVTYTTLMKALIRVDKFHKVFS 647
           P VVTY TL+  L + ++F + ++
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYA 520



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 10/342 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LIH L  S  L  A  + +      ++P  + YN +++   R   +E+ L L   M 
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           ++G     ++Y+++I+ L    K+D ++ + +L  E +C     D      ++ G  K G
Sbjct: 353 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA---DSMTYGVLVHGLCKNG 408

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA+  L  A+       T  Y+++I  L   GR  E   V +++ + G KP     N
Sbjct: 409 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           A++ G+V+   L+DA      M   G  P   TY+ LI+  + A R+  A  ++KEM   
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KPN   YS ++ G     +      +  +    G +PD   +N++I        +  A
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
           +  +  M      P+ +T NTL++  +K   ++RA ++++ +
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 46/291 (15%)

Query: 166 YSILIHALGRSEKLYEAF----LLSQRQRLT-PLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI  L  + K+ EA     LL ++      +TY  L+    +N  L KAL+++ +  
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
                 D   YS +I  L R  ++D  + +L ++ K       + +  + N VI GF +A
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH----GCKPNPHVCNAVINGFVRA 477

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK----------- 327
                A+RF G     G  P   TY  +I  LS + R  EA A+ +E+            
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537

Query: 328 ------------------------ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
                                   E G KP  K +N ++ G    G ++DA  + SEM++
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
              +P+  T++ L++ +     +E A  +   +  S +  N +       G
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEHTCQG 648


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 220/477 (46%), Gaps = 19/477 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E+ Y+ILIHAL +   + +A  L  + R     +T   YN+LI+   +   L++A  L+S
Sbjct: 373 EVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLS 432

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            M ++G      +YS +I  L R   + S++  +L++E+    I  +      +I GF K
Sbjct: 433 GMVKEGLTPTAASYSPLIAGLCRNGDLSSAM--ELHREMAERGIAWNNYTFTALINGFCK 490

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
                +A R         + P   T+  +I      G   +A  +++++ E GLKP    
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y +L+ G      +  A   V+++E S  + +  + + L+      GR+     +  EM 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA 610

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           V   K +   ++ I+     + + +++  + +EMK  GV+PD  FY  MID   K   + 
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMI 670

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +D+M+ +G  P+T+T   LI+   K G    AE L +EM      P   TYN  +
Sbjct: 671 QALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFL 730

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           +    +   E  K L   M  QG L ++V++  L+    ++G+  +AI+ +  +++    
Sbjct: 731 DYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITES--- 786

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
                   G  P  ++ +++I+   +     +AF +   M   GLKPDVV Y   ++
Sbjct: 787 --------GFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/482 (21%), Positives = 206/482 (42%), Gaps = 36/482 (7%)

Query: 186 SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           S+  + + + YN L+    +N  +++A+ + + M   G   D + Y  ++    R  +++
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFA-----KAGDASKAMRFLGMAQGVGLSPKT 300
            +L       I  D I L G + ++    F      K     +A         +G+ P  
Sbjct: 286 MAL------RITHDMIRL-GFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
             Y A+I  L  + R  +A+ +F+E+   GL+P    Y  L+    K G ++DA  +  +
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M   G+    + Y+ LI+ Y   G  + AR +L  M      P +  YS ++AG    G+
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                ++ +EM   G+  + + +  +I+ F K   +  A   FD+M+   + P+ +T+N 
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +I+ +   G   +A +L+++M E G  P   TY  +I+ L            + ++    
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSY 578

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN----------------------- 577
            + N  + T L+    + GRF +     + ++ + V                        
Sbjct: 579 AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSC 638

Query: 578 -AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M+  G+KP ++    +I+A  +++   +A      M  +G  P+ VT+T L+  L
Sbjct: 639 VLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNL 698

Query: 637 IR 638
            +
Sbjct: 699 CK 700



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 163/386 (42%), Gaps = 24/386 (6%)

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG++   G++    T + ++ +L    +   A  +F+++ +SG+      Y A ++ Y +
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              L  A  +V  ME  GV      Y++L+       R + A  V   M       +   
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++ G+    E +   ++  +M   G  P     + MID   K   +  A +   ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ P+   +N LID   K  R+D A+ LF+EM  RG  P   TY I+I+ L ++   E
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ------------- 574
           D   L   MR +G+   V  Y +L++ Y + G  D A   L G+  +             
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 575 -----------AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                      A+   R M   G+  +N    +LIN F +D++  EA  +   M ++ + 
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           P+ VT+  +++    V    K F  Y
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLY 536



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/435 (21%), Positives = 183/435 (42%), Gaps = 13/435 (2%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A +L  KM Q G H D   Y+  I++   +  +D +  + L   +E + ++      N +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA--RGLVVRMESEGVKASAVPYNVL 239

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G  K     +A+    +   +G++    TY  ++           A  +  ++   G 
Sbjct: 240 MYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGF 299

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P     + ++    K   +++A  +  ++   G++P+   Y+ LID      R++ A  
Sbjct: 300 VPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADR 359

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + KEM     +PN   Y+ ++     RG  +    +  +M+  G++   + YN +I+ + 
Sbjct: 360 LFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYC 419

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A      M+ EG+ P   +++ LI    + G    A EL  EM ERG      
Sbjct: 420 KQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNY 479

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+  +IN   + ++ ++  RL   M    ++PN VT+  +++ Y           CL G 
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY-----------CLVGN 528

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +A   +  M   GLKP N    SLI+        ++A   +  ++ +    +  + T 
Sbjct: 529 IRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588

Query: 632 LMKALIRVDKFHKVF 646
           L+  L R  +F + +
Sbjct: 589 LLYGLFREGRFTETY 603



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 170/405 (41%), Gaps = 13/405 (3%)

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S ++ SL +  +   +L + L+ ++    + LD  +    I  + ++ +   A   +   
Sbjct: 167 SQILFSLVKIRQF--ALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRM 224

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+      Y  ++  L  + R  EA  V   +   G+      Y  L+ G+ +M  L
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  +  +M R G +P E   S +ID        E A  +  ++      PN F Y+ +
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNAL 344

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +        +    ++ KEM   G+EP+   Y ++I    K   +  A+  FD+M  +GI
Sbjct: 345 IDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +     +N+LI+ + K G  DRA  L   M + G  P   +Y+ +I  L           
Sbjct: 405 KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAME 464

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M  +G+  N  T+T L++ + +  + D+A    + + D  V            P+ 
Sbjct: 465 LHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV-----------IPNE 513

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  N +I  +       +AF +   M E GLKPD  TY +L+  L
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 41/392 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI+   + +K+ EA  L  +     + P  +T+N +I       ++ KA  L  +M 
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKE---- 255
           + G   D   Y  +I  L  T+ +                      ++LL  L++E    
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFT 600

Query: 256 --------IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                   +    ++LD      ++    K  D  K+       +  G+ P    Y  +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
            ALS     I+A   ++++   G  P T  +  L+    K GYL  AE +  EM    VL
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYSRILAGYRDRGEWQRTFQ 426
           P++ TY+  +D +A  G  E A+ +   M   H A   SF  + ++ G    G+ Q    
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSF--NILIKGLCKAGKIQEAID 778

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +++++  SG  PD   Y+ +I    K   ++ A   ++ ML +G++PD + +N  I    
Sbjct: 779 LMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCN 838

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
             G  D+A  ++  M   G  P   TY  +++
Sbjct: 839 VHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++I+++A  +    EK    F   + Q + P  + Y  +I A ++ +++ +ALN   +M 
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            DGY  + + ++++I +L ++  + S+ L  L KE+    +  +    N  +  FA  GD
Sbjct: 681 IDGYSPNTVTHTVLINNLCKSGYLGSAEL--LCKEMLAGNVLPNKFTYNCFLDYFATEGD 738

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA + L  A   G      ++  +I  L  +G+  EA  +  ++ ESG  P   +Y+ 
Sbjct: 739 MEKA-KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYST 797

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    KMG +  A  + +EM   G+ PD   Y++ I      G  + A  +   M  S 
Sbjct: 798 IIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSG 857

Query: 401 AKPNSFIYSRILAG 414
            +PN   Y  +L+G
Sbjct: 858 VQPNWDTYRALLSG 871


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 247/598 (41%), Gaps = 105/598 (17%)

Query: 131 SLLKNLCSSNSSIDLAY--AVVSWLQKHN--------LCYSYE-------LLYSILIHAL 173
           SLL  + S    +DL    A++ WL K          L ++         + Y++LI AL
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389

Query: 174 GRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            ++  + EA    L  + + ++P  +T++++I+   +   L+KA      M++ G + + 
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y  +I    +    D++L  ++Y ++ C+ ++++  +++ ++ G  + G   +AM   
Sbjct: 450 VTYGTLIDGFFKFQGQDAAL--EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
             A G GLS     Y  +I  L  +G    A    +EL +  + P    YN  +     +
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+A+  ++EM   G+ PD+ TY+ +I ++   G    A  +L EM++S  KPN   Y
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEP------------------------------ 438
           + ++AG    G  ++   +L EM S+G  P                              
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 439 -----DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK------ 487
                D   YN ++     +     A    + ML  GI PDTIT+N LI  H K      
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 488 -----------------------------CGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                         GR   A  +  EM++ G  P   TY+I+  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+Q    +  RL   M  +G +P V TY  L+  + ++           G+  QA   
Sbjct: 808 GHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA-----------GMMTQAKEL 856

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           F+ M+  G+ P++   + L++ +   +   E    L+ MKE G  P   T + + +A 
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 212/481 (44%), Gaps = 23/481 (4%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           L+++  R   L  A  L +  R T + YN L++A +   D   A  ++++M + G   D 
Sbjct: 79  LLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDG 135

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           +  + ++  L R  ++D++             +   G L    I GF   GD   A+   
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVA 192

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 GL      Y  ++     +G+   A  V + +KE+G+ P    Y   +  Y + 
Sbjct: 193 DRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRT 252

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
             +++A  +   M R+GVL D  T S L+      GR+  A  + +EM+   A PN   Y
Sbjct: 253 KGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY 312

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
             ++      G  +    +L EM S GV  D   Y  ++D  GK              LS
Sbjct: 313 CTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALS 372

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQER 525
           + + P+ +T+  LID   K    D AE++  EM+E+   P   T++ +IN     G  ++
Sbjct: 373 DNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDK 432

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
             + KR+   M+ +G+ PNVVTY TL+D     G F       +G  D A+  +  M  +
Sbjct: 433 ATEYKRM---MKERGINPNVVTYGTLID-----GFFK-----FQG-QDAALEVYHDMLCE 478

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+K +   ++SL+N   ++ +  EA A+ +    +GL  D V YTTL+  L +       
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA 538

Query: 646 F 646
           F
Sbjct: 539 F 539



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 225/550 (40%), Gaps = 33/550 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-----CYSYELLYSILIHALGRSEKLYEAF 183
           +++L+   C +   +D A  V+  +++  +      Y+  ++Y      +  +  LYE  
Sbjct: 207 YNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG- 264

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++     L  +T +AL++   R+    +A  L  +M + G   + + Y  +I SL +  +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                L  L  E+    + +D      ++    K G   +    L  A    LSP   TY
Sbjct: 325 --GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I AL  +    EAE V  E++E  + P    +++++ G+VK G L  A      M+ 
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+  TY  LID +      ++A  V  +M     K N FI   ++ G R  G+ + 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + K+   SG+  D   Y  +ID   K   +  A      ++   + PD + +N  I+
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           C    G++  A+    EM+  G  P  +TYN MI     +       +LL  M+   + P
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNAFRV----------------- 581
           N++TY TLV     +G  + A   L      G S  ++   RV                 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M   GL       N+L+          +A  VL+ M  +G+ PD +T+  L+    + 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 640 DKFHKVFSSY 649
                 F++Y
Sbjct: 743 SHLDNAFATY 752



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L ++  +  AF   Q    + + P  + YN  I+        ++A + +++MR
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+ +I S  R  +   +L  KL  E++   I+ +    N ++ G    G 
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKAL--KLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G SP + T+  V+ A S S R      + E +  +GL      YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+     G  + A  V+ EM  SG+ PD  T++ LI  +  +   ++A     +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   ++ +L G    G       VL EM+ SG+EP+   Y+++    GK +    AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  M+ +G  P   T+N LI    K G   +A+ELF++MQ+RG  P + TY+I+++  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
                  +VK+ L +M+ +G  P+  T + +   + + G
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 199/458 (43%), Gaps = 24/458 (5%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P + NAL+ +  R   L  A+ L+   R        + Y++++ +L+     D +    +
Sbjct: 73  PASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAALS-----DHAHAPAV 122

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV-ITALS 311
             E+    +  DG  +N ++ G  + G    A      A G+  +P  ++   + +  ++
Sbjct: 123 LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGI--TPWMSSAGTLSLLDIA 180

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G T  A +V + +   GL      YN L+ G+ + G +  A  V+  M+ +GV P+  
Sbjct: 181 GFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+  I  Y      E A  + + M  +    +    S ++AG    G +   + + +EM
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREM 300

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G  P+   Y  +ID+  K       ++    M+S G+  D +T+  L+D   K G+ 
Sbjct: 301 DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKT 360

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D  ++           P   TY ++I+ L +    ++ +++L  M  + + PNVVT++++
Sbjct: 361 DEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSV 420

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++ + +            GL D+A    R+M+  G+ P+ +   +LI+ F + Q    A 
Sbjct: 421 INGFVK-----------RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAAL 469

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            V   M   G+K +     +L+  L +  K  +  + +
Sbjct: 470 EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 123/273 (45%), Gaps = 7/273 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILI-HALGRSEKLY 180
           P+ L H  +   CS +  +D+   +  W+    L      Y  L  +L  H + R   + 
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              +L        +T+NALI    ++  L+ A    ++M       +   ++ ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I  +    +  E+E   +E +    + +  G  K  +  +AMR      G G  PK 
Sbjct: 777 VGRIGEA--GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY A+I+  + +G   +A+ +F+++++ G+ P +  Y+ L+ G+ ++    + +  + +
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKD 894

Query: 361 MERSGVLPDEHTYSLLIDAYANAG-RWESARIV 392
           M+  G  P + T S +  A++  G  W++ R++
Sbjct: 895 MKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 24/315 (7%)

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL  + ++  L+ A  ++         P    Y++L+ A ++      A  VL EM  
Sbjct: 77  NALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAH---APAVLAEMCK 128

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM--IDTFGKYNCL 456
                +    + +LAG    G  Q         ++ G+ P       +  +D  G +   
Sbjct: 129 RGVPFDGVTVNTLLAGLCRNG--QVDAAAALADRAGGITPWMSSAGTLSLLDIAG-FGDT 185

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A++  DRM ++G+  D + +NTL+    + G+ D A  + + M+E G  P   TY   
Sbjct: 186 PAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I      +  E+   L   M   G+L +VVT + LV    + GRF +A            
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL--------- 296

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M   G  P+++   +LI++  +  R  E  ++L  M   G+  D+VTYT LM  L
Sbjct: 297 --FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 637 IRVDKFHKVFSSYLF 651
            +  K  +V  +  F
Sbjct: 355 GKQGKTDEVKDTLRF 369


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 203/454 (44%), Gaps = 7/454 (1%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKH----NLCYSYELLYSILI 170
           F    S    P+    ++L N     + +  A++++  + K     N+     L+    I
Sbjct: 78  FSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCI 137

Query: 171 HALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           + +      +   L+++   L   +Y +LI+   +N     AL L+ KM +D    + I 
Sbjct: 138 NGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLIT 197

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YS VI  L +   I  +L  +L+  +    I +D    N +I G    G   +A R L M
Sbjct: 198 YSTVIDGLCKDRLIADAL--RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTM 255

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                ++P   T+  ++ AL   GR +EA+ VF  + + G KP    YNAL++G+     
Sbjct: 256 MVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNN 315

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A  + + M + G+ PD   Y++LI+ Y      + A ++ KE+   +  PN   Y+ 
Sbjct: 316 VSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNS 375

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G    G      +++ EM   G  PD   YN+ +D F K      A++ F R + +G
Sbjct: 376 LIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF-RQIVQG 434

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I PD   ++ +++   K  +   AEE  + +   G  P   TY IMIN L +   +++  
Sbjct: 435 IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            LL  M      P+ VT+ T++    +    D A
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGALQERNETDKA 528



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 205/468 (43%), Gaps = 29/468 (6%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQK 251
             ++ L+ A  R      A++L S++   G        +++I        +    SLL  
Sbjct: 56  FVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGT 115

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + K       + +    N +I GF   G  SKAM F       G      +Y ++I  L 
Sbjct: 116 ILKM----GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +G+T +A  + ++++E  ++P    Y+ ++ G  K   + DA  + S +   G+L D  
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ LI    + G+W  A  +L  M   +  P+ + ++ ++      G       V   M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G +PD   YN +++ F   N +  A   F+RM+  G+EPD + +N LI+ + K    
Sbjct: 292 MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV 351

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A  LF+E++ +   P   TYN +I+ L +  R   V+ L+  M  +G  P++VTY   
Sbjct: 352 DEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIF 411

Query: 552 VDIYGQSGRFDDAI----ECLEGLSDQ-------------------AVNAFRVMRTDGLK 588
           +D + +S  ++ AI    + ++G+                      A  A + +   G  
Sbjct: 412 LDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCC 471

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           P+      +INA  +D    EA  +L  M +N   PD VT+ T++ AL
Sbjct: 472 PNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGAL 519



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/431 (21%), Positives = 176/431 (40%), Gaps = 60/431 (13%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           + + ++    + G    A+         G++P  AT   +I    +      A ++   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            + G +P    +N L+ G+   G +  A     ++   G   DE +Y  LI+     G+ 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGY-RDR--------------------------- 418
             A  +L++ME    +PN   YS ++ G  +DR                           
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 419 -------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
                  G+W+   ++L  M    + PD + +N+++D   K   +  A   F  M+  G 
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD +T+N L++          A ELF  M +RG  P    YN++IN   + +  ++   
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------ 573
           L   +R + L+PN+ TY +L+D   + GR     E ++ + D                  
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416

Query: 574 ------QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +A++ FR +   G+ P     + ++  F + ++   A   LQ++  +G  P+V 
Sbjct: 417 KSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475

Query: 628 TYTTLMKALIR 638
           TYT ++ AL +
Sbjct: 476 TYTIMINALCK 486



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 11/348 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++ A+   G    A ++F +L   G+ P       L+  Y    +L  A  +
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  + + G  P+  T++ LI+ +   G    A     ++       + F Y  ++ G   
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+ +   Q+L++M+   V P+   Y+ +ID   K   +  A+  F  + S GI  D + 
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N+LI      G++  A  L   M      P   T+NI+++ L ++ R  + + +   M 
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G  P++VTY  L++ +           CL     +A   F  M   GL+P  L  N L
Sbjct: 293 KRGEKPDIVTYNALMEGF-----------CLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           IN + +     EA  + + ++   L P++ TY +L+  L ++ +   V
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCV 389



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 24/261 (9%)

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           H  P  F++ ++L      G +     +  ++ S G+ P      ++I+ +     L  A
Sbjct: 50  HPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFA 109

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +    +L  G +P+ +T+NTLI+     G   +A     ++  +GY     +Y  +IN 
Sbjct: 110 FSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLING 169

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
           L +  +  D  +LL  M    + PN++TY+T++D   +     DA+              
Sbjct: 170 LCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVD 229

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G   +A     +M    + P +   N L++A  ++ R  EA  V  
Sbjct: 230 VVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFA 289

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M + G KPD+VTY  LM+  
Sbjct: 290 VMMKRGEKPDIVTYNALMEGF 310



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/345 (20%), Positives = 138/345 (40%), Gaps = 78/345 (22%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++IL+ AL +  ++ EA      ++ + ++   +TYNAL+     ++++ +A  L ++M 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D +NY+++I    + + +D +++  L+KEI C                      
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMV--LFKEIRCKN-------------------- 365

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                          L P  ATY ++I  L   GR    + + +E+ + G  P    YN 
Sbjct: 366 ---------------LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L  + K    + A  +  ++ + G+ PD + Y ++++ +    + + A           
Sbjct: 411 FLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAE---------- 459

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
                                    + L+ +   G  P+   Y +MI+   K      AM
Sbjct: 460 -------------------------EALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
               +M      PD +T+ T+I    +    D+AE+L  EM ERG
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERG 539


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/490 (23%), Positives = 218/490 (44%), Gaps = 18/490 (3%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y+ LIHA   +  +  A      +LSQ  +L    + ++IS  A   + E A +   K 
Sbjct: 168 IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 227

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + +      I Y+ ++Q+  +   +++  ++ L  ++E +  + +  L   V+ GFA+  
Sbjct: 228 KAENLVPGGIVYNSIVQAYCQAGNMET--VEALLAQMEEEGFQGNLGLYTTVLNGFAEIR 285

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D  K + F    +  GLSP  ATY  ++   + +G   +A  + EE+ + G+ P    Y 
Sbjct: 286 DEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYA 345

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ GY + G    A  V  +M  +G+ PD  TY++L+ A+  AGR + A  VL+ ++ +
Sbjct: 346 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQAN 405

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ IL GY   G  Q+  +V   +K++G+ P    YN ++    K   + +A
Sbjct: 406 RLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 465

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               D ML+ G+ P+  ++  L + + + G  ++A  +F+ M++         Y  ++  
Sbjct: 466 RLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +    +    +   +   GL  N +TY T++D + + G    A + L           
Sbjct: 526 CCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLL----------- 574

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           + M+  G     +   S I A        E    L  M+E  L+ +  TYTTL+   +  
Sbjct: 575 KDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAA 634

Query: 640 DKFHKVFSSY 649
               +  S Y
Sbjct: 635 ADPDQAISCY 644



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 178/374 (47%), Gaps = 2/374 (0%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  +++  A   D EK L+   +++  G       Y  +++  T+   +  +L   + +E
Sbjct: 274 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKAL--DILEE 331

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   +  +  +   ++ G+A+ GD + A +        GL P   TY  ++ A   +GR
Sbjct: 332 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGR 391

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  V E ++ + L P  + Y ++L GYVK G+++ A  V   ++ +G+ P   +Y+ 
Sbjct: 392 MDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNS 451

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+   A A + E+AR++L EM  +   PN   Y+ +  GY   G+ ++ F + + MK   
Sbjct: 452 LLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 511

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +  D   Y  ++    K   +  A+  F ++   G++ + IT+ T++D   + G   +A 
Sbjct: 512 LAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 571

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L ++MQ+ G+   T  Y   I         E+V   L  MR + L  N  TYTTL+  +
Sbjct: 572 DLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 631

Query: 556 GQSGRFDDAIECLE 569
             +   D AI C E
Sbjct: 632 LAAADPDQAISCYE 645



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 174/375 (46%), Gaps = 11/375 (2%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           +A+ GD   A       +   + P    Y ++I A + +     A A  EE+   G++  
Sbjct: 141 YARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLN 200

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              + +++ GY   G  + AE    + +   ++P    Y+ ++ AY  AG  E+   +L 
Sbjct: 201 EAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLA 260

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +ME    + N  +Y+ +L G+ +  + ++       +K+ G+ P    Y  ++  F K  
Sbjct: 261 QMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAG 320

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A+   + M   G+ P+ + +  ++D + + G +  A +++E+M   G  P   TYN
Sbjct: 321 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYN 380

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+++   +  R +    +L N++A  LLP + TYT+++D Y + G    A+E        
Sbjct: 381 ILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALE-------- 432

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
               F  ++T GL+P  ++ NSL++   + ++   A  +L  M  NG+ P+  +YT L +
Sbjct: 433 ---VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTE 489

Query: 635 ALIRVDKFHKVFSSY 649
              R     K F  +
Sbjct: 490 GYARAGDVEKAFGMF 504



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/467 (20%), Positives = 198/467 (42%), Gaps = 61/467 (13%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y L++    R    D    +  ++ +    I+ +  +   +I  +A+A D   A+     
Sbjct: 134 YGLLVDFYARHG--DKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEE 191

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G+    A + ++I+  +++G    AE  FE+ K   L P    YN++++ Y + G 
Sbjct: 192 MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN 251

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++  E ++++ME  G   +   Y+ +++ +A     E        ++     P +  Y  
Sbjct: 252 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 311

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I+  +   G   +   +L+EM   GV P+   Y +++D + +      A   ++ M+S G
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371

Query: 471 IEPDTITWNTLIDCHFKCGRYD-----------------------------------RAE 495
           ++PD +T+N L+    K GR D                                   +A 
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+F+ ++  G  P   +YN +++ L +  + E+ + +L  M A G++PN  +YT L + Y
Sbjct: 432 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGY 491

Query: 556 GQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
            ++G  + A                          C  G   +AV  F+ +   GLK + 
Sbjct: 492 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNR 551

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +   ++++ +      ++A  +L+ M+++G   D + YT+ +KA  R
Sbjct: 552 ITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFR 598



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           + Y+IL+HA    GR +K        Q  RL P   TY +++    +   ++KAL +  +
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDR 436

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           ++  G     ++Y+ ++  L +  +++++ L  +  E+  + +  + +    +  G+A+A
Sbjct: 437 IKTAGLRPGVVSYNSLLSGLAKARQMENARL--MLDEMLANGVVPNERSYTALTEGYARA 494

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD  KA       +   L+     Y A++ A   SG    A  VF+++ ++GLK     Y
Sbjct: 495 GDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITY 554

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +L G+ + G L  A  ++ +M++ G   D   Y+  I A   +G  E     L  M  
Sbjct: 555 CTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMRE 614

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
              + N+  Y+ ++ G+    +  +     ++ K+SG++ D+   N ++
Sbjct: 615 KKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 663



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 7/189 (3%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMS 217
           E  Y+ L     R+  + +AF + QR +     +  + Y AL+ AC ++  +++A+ +  
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           ++   G   + I Y  ++    R  ++  +  + L K+++     LD       I    +
Sbjct: 541 QITDAGLKHNRITYCTMLDGWARKGELSKA--RDLLKDMQKHGFHLDTICYTSFIKACFR 598

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +GD  +    L + +   L     TY  +I     +    +A + +E+ K SGL+  +  
Sbjct: 599 SGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSAL 658

Query: 338 YNALLKGYV 346
            N LL G +
Sbjct: 659 SNCLLSGLI 667


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 197/429 (45%), Gaps = 39/429 (9%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           +G++ ++ E  +L +  +     YNALIS   + + LE A  ++ +M+  G+  D + Y+
Sbjct: 120 IGKATRVME--ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYN 177

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           ++I S     K+D +L  ++++E+  D  E        +I      G    AM+ L    
Sbjct: 178 IMIGSFCSRGKLDLAL--EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEML 235

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P T TY A+I  +       +A  +   L   G KP    YN LL+  +  G   
Sbjct: 236 SKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWS 295

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           + E ++SEM   G  P+  T+S+LI      G+ E A  +L+ M+    KP+++ Y  ++
Sbjct: 296 EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM-------------IDTFGK------- 452
           AG+   G      + L+ M S G  PD   YN +             ++ F K       
Sbjct: 356 AGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCP 415

Query: 453 -----YNCL----------HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                YN L          + A+    ++L++GI+PD IT+N+LI C  + G  D A EL
Sbjct: 416 PNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIEL 475

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +MQ   Y P   +YNI++  L +  R  D   +L  M  +G  PN  TY  L++  G 
Sbjct: 476 LVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGF 535

Query: 558 SGRFDDAIE 566
           SG   +A+E
Sbjct: 536 SGLRAEAME 544



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 172/361 (47%), Gaps = 12/361 (3%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +AG  ++++ FL      G +P       +I    NS    +A  V E L+  G KP  
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AYNAL+ G++K   L++A  V+  M+  G LPD  TY+++I ++ + G+ + A  + +E
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +   + +P    Y+ ++      G      ++L EM S G+EPDT  YN +I    K   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A      + S G +PD IT+N L+      G++   E+L  EM   G  P   T++I
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I  L    + E+   LL +M+ +GL P+   Y  L+  + + GR D A E LE      
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE------ 372

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
                 M +DG  P  +  N+++       +  +A  V + + E G  P+V +Y TL  A
Sbjct: 373 -----YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 636 L 636
           L
Sbjct: 428 L 428



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 58/216 (26%)

Query: 487 KCGRYDRAEELFEEMQERGYFP----CTT------------------------------T 512
           + G+Y+ +    E M ++GY P    CT                                
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFA 140

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------ 566
           YN +I+   +  + E+  R+L  M+++G LP+VVTY  ++  +   G+ D A+E      
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200

Query: 567 ---C---------------LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
              C               L+G  D A+     M + GL+P  L  N++I    ++    
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +AF +L+ +   G KPD++TY  L++ L+   K+ +
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 13/433 (3%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           + +A  ++ K+ + G     + YS  I  L +   ++++L+  L + +      L+    
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALM--LIRNLHYTNQPLNSHSF 394

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           NDVI GF K G+  +A++ L   +  G+ P   +Y+ +I A    G  ++   + EE++ 
Sbjct: 395 NDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEH 454

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           S +KP   +Y +L+ G  K   L++A  +   +  S    D   Y  LID +   G  +S
Sbjct: 455 SQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDS 514

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L+EM  +   P +F    ++ GY   G + +  +V   M   G+ PDT   N ++D
Sbjct: 515 AIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILD 574

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +      A+   +     G   +  ++N +I    K G  +RA EL   M +R   P
Sbjct: 575 GSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLP 634

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               Y+ +I+   +Q  ++    L   M   G+  N+ TYT L+ I+  S +        
Sbjct: 635 SVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKM------- 687

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                +A   F+ M+  GL    ++  +LI  F  ++   +A+A+ + M   G  P+V+T
Sbjct: 688 ----HEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVIT 743

Query: 629 YTTLMKALIRVDK 641
           YT ++    + ++
Sbjct: 744 YTCIIDGFCKSNR 756



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 216/479 (45%), Gaps = 22/479 (4%)

Query: 178 KLYEAFLLS-QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           +L+ AFL S Q    + + ++ LIS  A N  LE AL++ S  +  G   D    + +++
Sbjct: 231 ELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLK 290

Query: 237 SLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF------AKAGDASKAMRFLGM 290
            L   N+++   ++++++E++ D+          +++ F        AG   +A   LG 
Sbjct: 291 CLVEANRVE--FVRRVFEELK-DRGPSPNIYTYTIMMNFYCSDVGCDAG-MRQAAVILGK 346

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G  P   TY+  I  L   G    A  +   L  +     + ++N ++ G+ K G 
Sbjct: 347 IYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGE 406

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + +A  V+ EM+ SG+LPD ++YS+LI+A+   G       +++EME S  KP+   Y+ 
Sbjct: 407 VFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTS 466

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G   +   Q    +   + +S  + D+  Y  +ID F     +  A+   + M+   
Sbjct: 467 LIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNE 526

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           + P   +  +LI  ++K G +D+A E+F  M   G +P T   N +++       +++  
Sbjct: 527 LVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEAL 586

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL + +  G   N  +Y  +  IY           C EG  ++A+     M    + PS
Sbjct: 587 TLLEDFQEHGFNLNPHSYNAI--IYKL---------CKEGYPERALELLPRMLKRNVLPS 635

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  ++LI+ F +      A  +   M + G+  ++ TYT LM       K H+ +  +
Sbjct: 636 VVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIF 694



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 195/472 (41%), Gaps = 18/472 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-----QRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS  IH L +   +  A +L +      Q L   ++N +I    +  ++ +AL ++ +M+
Sbjct: 359 YSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMK 418

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D  +YS++I +      +   L   L +E+E  +I+        +I G  K   
Sbjct: 419 SSGILPDVYSYSILINAFCGKGDVMKCL--DLMEEMEHSQIKPSIVSYTSLIHGLCKKNM 476

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A+              +  Y  +I      G    A  + EE+  + L P   +  +
Sbjct: 477 LQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRS 536

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L++GY K+G    A  V + M R G+ PD    + ++D    AG ++ A  +L++ +   
Sbjct: 537 LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHG 596

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N   Y+ I+      G  +R  ++L  M    V P    Y+ +I  F K +    A+
Sbjct: 597 FNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAV 656

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F RM+  GI  +  T+  L+       +   A  +F+EM+ERG      +Y  +I   
Sbjct: 657 NLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGF 716

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                 +    L   M  +G  PNV+TYT ++D + +S R            D A   F 
Sbjct: 717 CNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRI-----------DLATWVFD 765

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            M  D + P  +    LI+ + +     +A  +   MK+ G+ PD +T+  L
Sbjct: 766 KMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 38/296 (12%)

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS--GVEPDTHFYNVMI 447
           RI++    ++  +   +   R + G+ +  ++  TF++      S   VE     ++V+I
Sbjct: 196 RIIVHAFALAGMRLEVWALLRDIVGFCNEAKYD-TFELFSAFLDSPQHVERSGVVFDVLI 254

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F   + L +A+  F      G+EPD  T N L+ C  +  R +    +FEE+++RG  
Sbjct: 255 SVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPS 314

Query: 508 PCTTTYNIMINL----LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR--- 560
           P   TY IM+N     +G          +LG +   G  P VVTY+T +    + G    
Sbjct: 315 PNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEA 374

Query: 561 -------------------FDDAIE--CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
                              F+D I   C  G   +A+     M++ G+ P   + + LIN
Sbjct: 375 ALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILIN 434

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR-------VDKFHKVFSS 648
           AF       +   +++ M+ + +KP +V+YT+L+  L +       VD FH + +S
Sbjct: 435 AFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS 490


>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
 gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74850, chloroplastic; AltName: Full=Protein PLASTID
           TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
 gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
 gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
 gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
          Length = 862

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 221/504 (43%), Gaps = 87/504 (17%)

Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
           ++Q+   C   E +Y+I+I  LGR    +K  E F  + SQ    +  +Y ALI+A  RN
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
              E +L L+ +M+ +      + Y+ VI +  R   +D   L  L+ E+  +       
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGG-LDWEGLLGLFAEMRHE------- 241

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                                       G+ P   TY  +++A +  G   EAE VF  +
Sbjct: 242 ----------------------------GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            + G+ P    Y+ L++ + K+  L+    ++ EM   G LPD  +Y++L++AYA +G  
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  V  +M+ +   PN+  YS +L  +   G +    Q+  EMKSS  +PD   YN++
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ FG+       +  F  M+ E IEPD  T+  +I   F CG+    E           
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII---FACGKGGLHE----------- 439

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                                D +++L  M A  ++P+   YT +++ +GQ+        
Sbjct: 440 ---------------------DARKILQYMTANDIVPSSKAYTGVIEAFGQA-------- 470

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               L ++A+ AF  M   G  PS    +SL+ +F       E+ A+L  + ++G+  + 
Sbjct: 471 ---ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527

Query: 627 VTYTTLMKALIRVDKFHKVFSSYL 650
            T+   ++A  +  KF +   +Y+
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYV 551



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 29/400 (7%)

Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           LND   V   FA  GD  +++R F  M + +   P    Y  +I+ L   G   +   VF
Sbjct: 105 LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           +E+   G+     +Y AL+  Y + G  + +  ++  M+   + P   TY+ +I+A A  
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224

Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           G  WE    +  EM     +P+   Y+ +L+    RG       V + M   G+ PD   
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +++TFGK   L         M S G  PD  ++N L++ + K G    A  +F +MQ
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TY++++NL G+  R++DV++L   M++    P+  TY  L++++G+ G F 
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404

Query: 563 DAI--------ECLE----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           + +        E +E                GL + A    + M  + + PS+ A   +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            AFG+     EA      M E G  P + T+ +L+ +  R
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 210/457 (45%), Gaps = 40/457 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
           Y+ LI+A GR+ +   +  L  R   ++++P  LTYN +I+ACAR   D E  L L ++M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC 258
           R +G   D + Y+ ++ +       D                     S L++   K    
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298

Query: 259 DKI-ELDGQL-----------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +K+ +L G++            N ++  +AK+G   +AM      Q  G +P   TY+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +     SGR  +   +F E+K S   P    YN L++ + + GY K+   +  +M    +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TY  +I A    G  E AR +L+ M  +   P+S  Y+ ++  +     ++    
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
               M   G  P    ++ ++ +F +   +  + A   R++  GI  +  T+N  I+ + 
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G+++ A + + +M++    P   T   ++++       ++ +     M+A  +LP+++
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598

Query: 547 TYTTLVDIYGQSGRFDDAIECLEG-LSDQAVNAFRVM 582
            Y  ++ +YG++ R+DD  E LE  LS++  N  +V+
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 170/395 (43%), Gaps = 15/395 (3%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKL 179
           ++P    +++L    + + SI  A  V   +Q    C      YS+L++  G+S   + +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDV 371

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
            + FL  +     P   TYN LI         ++ + L   M ++    D   Y  +I +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
             +    + +  +K+ + +  + I    +    VI  F +A    +A+        VG +
Sbjct: 432 CGKGGLHEDA--RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   T+ +++ + +  G   E+EA+   L +SG+      +NA ++ Y + G  ++A   
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +ME+S   PDE T   ++  Y+ A   +  R   +EM+ S   P+   Y  +LA Y  
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMI----DTFGKYNCLHHAMAAFDRMLSEGIEP 473
              W    ++L+EM S+ V         MI    D    +  + + +   D++ SEG   
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVL---DKLNSEGCGL 666

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
               +N L+D  +  G+ +RA  +  E  +RG FP
Sbjct: 667 GIRFYNALLDALWWLGQKERAARVLNEATKRGLFP 701


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 210/444 (47%), Gaps = 19/444 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L   TYN L+ A  +ND ++ A  L+++M   G   D ++Y+ V+ S+ R  K++ +   
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA--- 232

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
              +E+   +I+    + N +I GF +     +           G+ P   TY+ VI  L
Sbjct: 233 ---RELSM-RIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTL 288

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
           S  G    A AV  ++   G  P    + +L+KGY   G L +A  + + M + G  P+ 
Sbjct: 289 SEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNT 348

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+ LI    + G+   A  V ++ME +   PN   YS ++ G+   G+     ++  +
Sbjct: 349 VAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M ++G  P+   Y  M+D   + +  +HA+   + M +    P+TIT+NT I      G+
Sbjct: 409 MITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGK 468

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
            + A ++  +M++ G  P  TTYN +++ L   +R  +  +++G +    +  N+VTY T
Sbjct: 469 TEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNT 528

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++  +  +G F  A++    L              G KP ++  N++I A+ +      A
Sbjct: 529 ILSGFCHAGMFKGALQIAGKL-----------LVGGTKPDSITYNTVIYAYCKQGEVKTA 577

Query: 611 FAVLQYMKENGLK-PDVVTYTTLM 633
             ++  + + G   PDV TYT+L+
Sbjct: 578 IQLVDRLTKKGEGYPDVFTYTSLL 601



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 217/508 (42%), Gaps = 49/508 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC  N  +D A  +++ +  +  C    + Y+ ++ ++ R  K+ EA  LS R
Sbjct: 181 YNMLLKALCK-NDRVDAARKLLAEMS-YKGCIPDAVSYTTVVSSMCRLGKVEEARELSMR 238

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
            +     YNALI+   R   +E+   L ++M  +G   D I YS VI +L+    ++ +L
Sbjct: 239 IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMAL 298

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                                           A  A  FL      G SP   T+ +++ 
Sbjct: 299 --------------------------------AVLAKMFLR-----GCSPNVHTFTSLMK 321

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                GR  EA  ++  + + G +P T AYN L+ G    G + +A  V  +MER+GV P
Sbjct: 322 GYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFP 381

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +E TYS LID +A AG    A  +  +M  +   PN  +Y+ ++        +     ++
Sbjct: 382 NETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLI 441

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           + M +    P+T  +N  I           AM   ++M   G  P+  T+N ++D  F  
Sbjct: 442 ENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNA 501

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            R   A ++  E++E        TYN +++       ++   ++ G +   G  P+ +TY
Sbjct: 502 KRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITY 561

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
            T++  Y + G    AI+ ++ L+ +      V     L      L  + N  G D    
Sbjct: 562 NTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSL------LWGVCNWIGVD---- 611

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           EA   L  M   G+ P+  T+  L++ L
Sbjct: 612 EAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 197/486 (40%), Gaps = 53/486 (10%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCD------FIN--------------- 230
           TPLTY  +I       D++    L+  M+ +G  C+       IN               
Sbjct: 72  TPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTF 131

Query: 231 --------------YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
                         Y+ V+ +L   NK    ++  +Y  ++ D IEL+    N ++    
Sbjct: 132 YRIGEFGCKPSVKIYNHVLDALLSENKFQ--MINGIYNNMKRDGIELNVYTYNMLLKALC 189

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K      A + L      G  P   +Y  V++++   G+  EA  +   +K         
Sbjct: 190 KNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VP 244

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            YNAL+ G+ +   +++   + +EM   G+ PD  TYS +I+  +  G  E A  VL +M
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    PN   ++ ++ GY   G       +   M   G EP+T  YN +I     Y  +
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A++   +M   G+ P+  T++TLID   K G    A E++ +M   G  P    Y  M
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +++L     +     L+ NM      PN +T+ T +              C  G ++ A+
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL-----------CCSGKTEWAM 473

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                MR  G  P+    N +++     +R  EA  ++  ++E  +K ++VTY T++   
Sbjct: 474 KVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGF 533

Query: 637 IRVDKF 642
                F
Sbjct: 534 CHAGMF 539



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 206/515 (40%), Gaps = 58/515 (11%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSK 218
           L Y+ +I  LG    +     L Q  +L  ++ N      +I+A  R    E+AL    +
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + + G       Y+ V+ +L   NK    ++  +Y  ++ D IEL+    N ++    K 
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQ--MINGIYNNMKRDGIELNVYTYNMLLKALCKN 191

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                A + L      G  P   +Y  V++++   G+  EA  +   +K          Y
Sbjct: 192 DRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVY 246

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL+ G+ +   +++   + +EM   G+ PD  TYS +I+  +  G  E A  VL +M +
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN   ++ ++ GY   G       +   M   G EP+T  YN +I     Y  +  
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++   +M   G+ P+  T++TLID   K G    A E++ +M   G  P    Y  M++
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVD 426

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +L     +     L+ NM      PN +T+ T +              C  G ++ A+  
Sbjct: 427 VLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL-----------CCSGKTEWAMKV 475

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE------------------- 619
              MR  G  P+    N +++     +R  EA  ++  ++E                   
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 620 ----------------NGLKPDVVTYTTLMKALIR 638
                            G KPD +TY T++ A  +
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCK 570



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 157/349 (44%), Gaps = 16/349 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+S     +  VI A   +G   +A   F  + E G KP  K YN +L   +     +  
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + + M+R G+  + +TY++L+ A     R ++AR +L EM      P++  Y+ +++ 
Sbjct: 163 NGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G+ +   ++   +KS         YN +I+ F + + +      F+ M  EGI+PD
Sbjct: 223 MCRLGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPD 277

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT++T+I+   + G  + A  +  +M  RG  P   T+  ++       R  +   L  
Sbjct: 278 VITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWN 337

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  PN V Y TL  I+G          C  G   +AV+  + M  +G+ P+    
Sbjct: 338 RMIQEGSEPNTVAYNTL--IHGL---------CSYGKMVEAVSVSQKMERNGVFPNETTY 386

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           ++LI+ F +      A  +   M  NG  P+VV YT ++  L R   F+
Sbjct: 387 STLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFN 435



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 165/361 (45%), Gaps = 36/361 (9%)

Query: 306 VITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDA---EFVVSEM 361
           V+  L N    + A   F+ +  S   K     Y  ++K   ++GY +D    ++++  M
Sbjct: 43  VLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIK---RLGYERDIDGIQYLLQLM 99

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
           +  G+  +E  + ++I+AY  AG  E A      +     KP+  IY+ +L       ++
Sbjct: 100 KLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKF 159

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q    +   MK  G+E + + YN+++    K + +  A      M  +G  PD +++ T+
Sbjct: 160 QMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTV 219

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           +    + G+ + A EL   M+ + + P    YN +IN    + + E+V  L   M  +G+
Sbjct: 220 VSSMCRLGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGI 274

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVN 577
            P+V+TY+T+++   + G  + A+  L                         G   +A++
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            +  M  +G +P+ +A N+LI+      +  EA +V Q M+ NG+ P+  TY+TL+    
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA 394

Query: 638 R 638
           +
Sbjct: 395 K 395



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 94/243 (38%), Gaps = 44/243 (18%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEK 211
           N C    ++Y+ ++  L R+     A  L +        P  +T+N  I     +   E 
Sbjct: 412 NGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEW 471

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A+ ++++MRQ G   +   Y+ V+  L    +   +L  ++  EIE  +I+ +    N +
Sbjct: 472 AMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREAL--QIVGEIEEMEIKSNLVTYNTI 529

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA------------ 319
           + GF  AG    A++  G     G  P + TY  VI A    G    A            
Sbjct: 530 LSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGE 589

Query: 320 ----------------------EAV--FEELKESGLKPRTKAYNALLKG-YVKMGYLKDA 354
                                 EAV   +++   G+ P    +NAL++G + K+G+L   
Sbjct: 590 GYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPI 649

Query: 355 EFV 357
             V
Sbjct: 650 HIV 652


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 204/447 (45%), Gaps = 14/447 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +++     + L+      +KM   G   D   ++++I++L R +++  ++L  + ++
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL--MLED 214

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D +    V+ G+ + GD   A+R        G S    +   ++      GR
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274

Query: 316 TIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +A    +E+  + G  P    +N L+ G  K G++K A  ++  M + G  PD +TY+
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I      G  + A  VL +M      PN+  Y+ +++      + +   ++ + + S 
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   +N +I           AM  F+ M S+G EPD  T+N LID     G+ D A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + ++M+  G      TYN +I+   +  +  + + +   M   G+  N VTY TL+D 
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +S R +DA +    L DQ       M  +G KP     NSL+  F       +A  ++
Sbjct: 515 LCKSRRVEDAAQ----LMDQ-------MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           Q M  NG +PD+VTY TL+  L +  +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGR 590



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 197/434 (45%), Gaps = 28/434 (6%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG- 289
           Y  ++  L R+   D   ++K+ ++++  + E+       +I  +A+     + +  +  
Sbjct: 86  YEEILLRLGRSGSFDD--MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           M    GL P T  Y  ++  L +       E    ++   G+KP    +N L+K   +  
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 203

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            L+ A  ++ +M   G++PDE T++ ++  Y   G  + A  + ++M       ++   +
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
            I+ G+   G  +     ++EM +  G  PD + +N +++   K   + HA+   D ML 
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           EG +PD  T+N++I    K G    A E+ ++M  R   P T TYN +I+ L ++ + E+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------------- 566
              L   + ++G+LP+V T+ +L+     +     A+E                      
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443

Query: 567 --CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
             C +G  D+A+N  + M   G   S +  N+LI+ F +  +  EA  +   M+ +G+  
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503

Query: 625 DVVTYTTLMKALIR 638
           + VTY TL+  L +
Sbjct: 504 NSVTYNTLIDGLCK 517



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 202/456 (44%), Gaps = 34/456 (7%)

Query: 194 LTYNALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSS----- 247
           ++ N ++    +   +E ALN + +M  QDG+  D   ++ ++  L +   +  +     
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 248 -LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            +LQ+ Y        + D    N VI G  K G+  +A+  L        SP T TY  +
Sbjct: 320 VMLQEGY--------DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I+ L    +  EA  +   L   G+ P    +N+L++G       + A  +  EM   G 
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PDE TY++LID+  + G+ + A  +LK+ME+S    +   Y+ ++ G+    + +   +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  EM+  GV  ++  YN +ID   K   +  A    D+M+ EG +PD  T+N+L+    
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G   +A ++ + M   G  P   TY  +I+ L +  R E   +LL +++ +G+     
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN-----LALNSLINAF 601
            Y  ++      G F       +  + +A+N FR M      P +     +    L N  
Sbjct: 612 AYNPVI-----QGLFR------KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           G  +   EA   L  + E G  P+  +   L + L+
Sbjct: 661 GPIR---EAVDFLVELLEKGFVPEFSSLYMLAEGLL 693



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 84/435 (19%)

Query: 280 DASKAMRFLGMA-QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES--------- 329
           D S A+R   +A +    SP+ A Y  ++  L  SG   + + + E++K S         
Sbjct: 62  DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121

Query: 330 ---------------------------GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
                                      GLKP T  YN +L   V    LK  E   ++M 
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ PD  T+++LI A   A +   A ++L++M      P+   ++ ++ GY + G+  
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241

Query: 423 RTFQVLKEM------------------------------------KSSGVEPDTHFYNVM 446
              ++ ++M                                       G  PD + +N +
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           ++   K   + HA+   D ML EG +PD  T+N++I    K G    A E+ ++M  R  
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P T TYN +I+ L ++ + E+   L   + ++G+LP+V T+ +L+              
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL----------- 410

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           CL      A+  F  MR+ G +P     N LI++     +  EA  +L+ M+ +G    V
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470

Query: 627 VTYTTLMKALIRVDK 641
           +TY TL+    + +K
Sbjct: 471 ITYNTLIDGFCKANK 485



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 11/227 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           +++L+   C +N + + A  +   ++ H +  +  + Y+ LI  L +S ++ +A      
Sbjct: 473 YNTLIDGFCKANKTRE-AEEIFDEMEVHGVSRN-SVTYNTLIDGLCKSRRVEDAAQLMDQ 530

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ + Q+    TYN+L++   R  D++KA +++  M  +G   D + Y  +I  L +  +
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
           ++ +   KL + I+   I L     N VI G  +    ++A+  F  M +     P   +
Sbjct: 591 VEVA--SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648

Query: 303 YAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           Y  V   L N G  I EA     EL E G  P   +   L +G + +
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 216/482 (44%), Gaps = 25/482 (5%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           L+++  R   L  A  L +  R T + YN L++A +   D   A  ++++M + G   D 
Sbjct: 79  LLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALS---DHAHAPAVLAEMCKRGVPFDG 135

Query: 229 INYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
           +  + ++  L R  ++D++  L      I      LD    N +I G+ + GD   A+  
Sbjct: 136 VTVNTLLAGLCRNGQVDAAAALADRGGGIH----ALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
                  GL      Y  ++     +G+   A  V + +KE+G+ P    Y   +  Y +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              +++A  +   M R+GVL D  T S L+      GR+  A  + +EM+   A PN   
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  ++      G  +    +L EM S GV  D   Y  ++D  GK              L
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE 524
           S+ + P+ +T+  LID   K    D AE++  EM+E+   P   T++ +IN     G  +
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           +  + KR+   M+ +G+ PNVVTY TL+D     G F       +G  D A+  +  M  
Sbjct: 432 KATEYKRM---MKERGINPNVVTYGTLID-----GFFK-----FQG-QDAALEVYHDMLC 477

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +G+K +   ++SL+N   ++ +  EA A+ +    +GL  D V YTTL+  L +      
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 645 VF 646
            F
Sbjct: 538 AF 539



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 138/598 (23%), Positives = 247/598 (41%), Gaps = 105/598 (17%)

Query: 131 SLLKNLCSSNSSIDLAY--AVVSWLQKHN--------LCYSYE-------LLYSILIHAL 173
           SLL  + S    +DL    A++ WL K          L ++         + Y++LI AL
Sbjct: 330 SLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389

Query: 174 GRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
            ++  + EA    L  + + ++P  +T++++I+   +   L+KA      M++ G + + 
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV 449

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y  +I    +    D++L  ++Y ++ C+ ++++  +++ ++ G  + G   +AM   
Sbjct: 450 VTYGTLIDGFFKFQGQDAAL--EVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
             A G GLS     Y  +I  L  +G    A    +EL +  + P    YN  +     +
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K+A+  ++EM   G+ PD+ TY+ +I ++   G    A  +L EM++S  KPN   Y
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEP------------------------------ 438
           + ++AG    G  ++   +L EM S+G  P                              
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMN 687

Query: 439 -----DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK------ 487
                D   YN ++     +     A    + ML  GI PDTIT+N LI  H K      
Sbjct: 688 AGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDN 747

Query: 488 -----------------------------CGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                                         GR   A  +  EM++ G  P   TY+I+  
Sbjct: 748 AFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILAT 807

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             G+Q    +  RL   M  +G +P V TY  L+  + ++           G+  QA   
Sbjct: 808 GHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA-----------GMMTQAKEL 856

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           F+ M+  G+ P++   + L++ +   +   E    L+ MKE G  P   T + + +A 
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 128/550 (23%), Positives = 225/550 (40%), Gaps = 33/550 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-----CYSYELLYSILIHALGRSEKLYEAF 183
           +++L+   C +   +D A  V+  +++  +      Y+  ++Y      +  +  LYE  
Sbjct: 207 YNTLVAGFCRA-GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEG- 264

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++     L  +T +AL++   R+    +A  L  +M + G   + + Y  +I SL +  +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                L  L  E+    + +D      ++    K G   +    L  A    LSP   TY
Sbjct: 325 --GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTY 382

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I AL  +    EAE V  E++E  + P    +++++ G+VK G L  A      M+ 
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P+  TY  LID +      ++A  V  +M     K N FI   ++ G R  G+ + 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + K+   SG+  D   Y  +ID   K   +  A      ++   + PD + +N  I+
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           C    G++  A+    EM+  G  P  +TYN MI     +       +LL  M+   + P
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLE-----GLSDQAVNAFRV----------------- 581
           N++TY TLV     +G  + A   L      G S  ++   RV                 
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 582 --MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M   GL       N+L+          +A  VL+ M  +G+ PD +T+  L+    + 
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 640 DKFHKVFSSY 649
                 F++Y
Sbjct: 743 SHLDNAFATY 752



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L ++  +  AF   Q    + + P  + YN  I+        ++A + +++MR
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+ +I S  R  +   +L  KL  E++   I+ +    N ++ G    G 
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKAL--KLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   L      G SP + T+  V+ A S S R      + E +  +GL      YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL+     G  + A  V+ EM  SG+ PD  T++ LI  +  +   ++A     +M   +
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   ++ +L G    G       VL EM+ SG+EP+   Y+++    GK +    AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +  M+ +G  P   T+N LI    K G   +A+ELF++MQ+RG  P + TY+I+++  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
                  +VK+ L +M+ +G  P+  T + +   + + G
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPG 918



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 224/544 (41%), Gaps = 72/544 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTP---LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+IL+ AL  S+  +   +L++  +R  P   +T N L++   RN  ++ A  L    R 
Sbjct: 106 YNILLAAL--SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RG 161

Query: 222 DGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            G H  D I ++ +I    R     ++L   +   +    + +D    N ++ GF +AG 
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAAL--SVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 281 ASKAMRFLGMAQGVGLSPKTATY-----------------------------------AA 305
              A   L M +  G+ P  ATY                                   +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   GR  EA A+F E+ + G  P    Y  L+    K G  K+   ++ EM   G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V+ D  TY+ L+D     G+ +  +  L+     +  PN   Y+ ++             
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDC 484
           QVL EM+   + P+   ++ +I+ F K   L  A   + RM+ E GI P+ +T+ TLID 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTLIDG 458

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            FK    D A E++ +M   G        + ++N L +  + E+   L  +    GL  +
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
            V YTTL+D   ++G    A +                        C+ G   +A +   
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            MR  GLKP     N++I +       A+A  +L  MK + +KP+++TY TL+  L    
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 641 KFHK 644
              K
Sbjct: 639 AVEK 642



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 194/457 (42%), Gaps = 22/457 (4%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P + NAL+ +  R   L  A+ L+   R        + Y++++ +L+     D +    +
Sbjct: 73  PASLNALLYSHCRLRLLRPAIALLRSSRPT-----TVAYNILLAALS-----DHAHAPAV 122

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E+    +  DG  +N ++ G  + G    A        G+  +     +  +I     
Sbjct: 123 LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIH-ALDVIGWNTLIAGYCR 181

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G T  A +V + +   GL      YN L+ G+ + G +  A  V+  M+ +GV P+  T
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+  I  Y      E A  + + M  +    +    S ++AG    G +   + + +EM 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G  P+   Y  +ID+  K       ++    M+S G+  D +T+  L+D   K G+ D
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             ++           P   TY ++I+ L +    ++ +++L  M  + + PNVVT+++++
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           + + +            GL D+A    R+M+  G+ P+ +   +LI+ F + Q    A  
Sbjct: 422 NGFVK-----------RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           V   M   G+K +     +L+  L +  K  +  + +
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 130/320 (40%), Gaps = 50/320 (15%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P T AYN LL       +   A  V++EM + GV  D  T + L+      G+ ++A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-- 154

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
                                A   DRG       V+              +N +I  + 
Sbjct: 155 ---------------------AALADRGGGIHALDVIG-------------WNTLIAGYC 180

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +      A++  DRM ++G+  D + +NTL+    + G+ D A  + + M+E G  P   
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY   I      +  E+   L   M   G+L +VVT + LV    + GRF +A       
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL---- 296

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                  FR M   G  P+++   +LI++  +  R  E  ++L  M   G+  D+VTYT 
Sbjct: 297 -------FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349

Query: 632 LMKALIRVDKFHKVFSSYLF 651
           LM  L +  K  +V  +  F
Sbjct: 350 LMDWLGKQGKTDEVKDTLRF 369



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 123/273 (45%), Gaps = 7/273 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILI-HALGRSEKLY 180
           P+ L H  +   CS +  +D+   +  W+    L      Y  L  +L  H + R   + 
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              +L        +T+NALI    ++  L+ A    ++M       +   ++ ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I  +    +  E+E   +E +    + +  G  K  +  +AMR      G G  PK 
Sbjct: 777 VGRIGEA--GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY A+I+  + +G   +A+ +F+++++ G+ P +  Y+ L+ G+ ++    + +  + +
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKD 894

Query: 361 MERSGVLPDEHTYSLLIDAYANAG-RWESARIV 392
           M+  G  P + T S +  A++  G  W++ R++
Sbjct: 895 MKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 210/447 (46%), Gaps = 24/447 (5%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
            R   +++A+++  +M  D Y+C+    +Y+ ++  L      + +   K+Y  ++ + I
Sbjct: 87  GRKGKVQEAVDVFERM--DFYNCEPSIFSYNAIMNILVEYGYFNQA--HKVYLRMKHEGI 142

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
             D       I  F +      A+R L      G       Y  VI+        +EA  
Sbjct: 143 APDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYE 202

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F ++   G+ P    +N L+    K G+L++ E +++++ ++GV P+  T+++ I    
Sbjct: 203 LFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLC 262

Query: 382 NAGRWESA--RIV-----LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             G  E A  ++V     L +M     +P+ F Y+ I+ GY   G+ Q   ++LK+ K  
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD   Y  +I    +   + HA+A F+  L +G++P  + +NTLI    + G   +A
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L  +M + G  P   TYN++IN L +     D   LL    A+G LP++ T+ TL+D 
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y +  + D+AI  L+            M + G+ P  +  NS++N   +  +  +     
Sbjct: 443 YCKRLKMDNAIGILDS-----------MWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           + + E G  P+++TY  L+++L +  K
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARK 518



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 132/551 (23%), Positives = 229/551 (41%), Gaps = 77/551 (13%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNL 215
           LL  + + A+   GR  K+ EA  + +R        +  +YNA+++         +A  +
Sbjct: 74  LLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKV 133

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
             +M+ +G   D   +++ I+S  RT +  ++L  +L   +     EL+  +   VI GF
Sbjct: 134 YLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAAL--RLLNNMPSQGCELNAVVYCTVISGF 191

Query: 276 -----------------------------------AKAGDASKAMRFLGMAQGVGLSPKT 300
                                               K G   +  + L      G+ P  
Sbjct: 192 YEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251

Query: 301 ATYAAVITALSNSG-------RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            T+   I  L   G       + +EAE    ++   GL+P    YN ++ GY K+G ++D
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  ++ + +  G +PDE TY  LI      G  + A  + +E      KP+  +Y+ ++ 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G   +G   +  Q++ +M   G+ PD   YN++I+   K  C+  A    +  +++G  P
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLP 431

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+NTLID + K  + D A  + + M   G  P   TYN ++N L +  + EDV    
Sbjct: 432 DIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------ 569
             +  +G LPN++TY  L++   ++ +  +A++ LE                        
Sbjct: 492 KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNN 551

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLA-LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           G  D+A   FR M         +A  N +INAF E      A  +   M + G  PD  T
Sbjct: 552 GDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYT 611

Query: 629 YTTLMKALIRV 639
           Y  ++    +V
Sbjct: 612 YRVMIDGFCKV 622



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 210/493 (42%), Gaps = 56/493 (11%)

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           YE F    R  + P   T+N L+    +   L++   L++K+ ++G   +   +++ IQ 
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 238 LTRTNKI---DSSLLQK---LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           L R   +   +S +++    L+K +    +E D    N +I G++K G    A R L  A
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVN-KGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G  P   TY ++I  +   G    A A+FEE    GLKP    YN L+KG  + G +
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  ++++M + G+ PD  TY+L+I+     G    A  +L         P+ F ++ +
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  R +      +L  M S GV PD   YN +++   K       M  F  ++ +G 
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP----------------------- 508
            P+ IT+N LI+   K  +   A +L EE++ RG  P                       
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559

Query: 509 -----------CTT--TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
                      C T  TYNIMIN   E+   +  ++L   M  +G  P+  TY  ++D +
Sbjct: 560 LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGF 619

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            + G  +   + L  L +  +         G  PS      +IN      R  EA  ++ 
Sbjct: 620 CKVGNVNSGYDFL--LKEIEI---------GFVPSLTTFGRVINCLCVQHRVHEAVGIVH 668

Query: 616 YMKENGLKPDVVT 628
            M   G+ P+ V 
Sbjct: 669 LMVRTGVVPEAVV 681



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 191/437 (43%), Gaps = 55/437 (12%)

Query: 211 KALNLMSKMR-QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           KAL++ + ++ +DG+   F+ Y  +I+ L    + D+  ++++  E+   ++ +D  LL 
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDA--MERVLMEM---RLNVDNSLLE 76

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            V V          AMR  G                        G+  EA  VFE +   
Sbjct: 77  GVYVS---------AMRNYG----------------------RKGKVQEAVDVFERMDFY 105

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
             +P   +YNA++   V+ GY   A  V   M+  G+ PD  T+++ I ++    R  +A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L  M     + N+ +Y  +++G+ +       +++  +M   G+ P    +N ++  
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG-------RYDRAEELFEEMQ 502
             K   L       +++L  G+ P+  T+N  I    + G       +   AE    +M 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            +G  P   TYN +I    +  + +D  R+L + + +G +P+  TY +L+    Q G  D
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+     L ++A+         GLKPS +  N+LI    +     +A  ++  M + G+
Sbjct: 346 HAL----ALFEEALGK-------GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGM 394

Query: 623 KPDVVTYTTLMKALIRV 639
            PD+ TY  ++  L ++
Sbjct: 395 SPDIWTYNLVINGLCKM 411



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 172/391 (43%), Gaps = 8/391 (2%)

Query: 163 ELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +  Y+ +I+   +  K+ +A  +   ++ +   P   TY +LI    ++ D++ AL L  
Sbjct: 293 DFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFE 352

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +    G     + Y+ +I+ L++   +  +L  +L  ++  + +  D    N VI G  K
Sbjct: 353 EALGKGLKPSIVLYNTLIKGLSQQGLVLKAL--QLMNDMSKEGMSPDIWTYNLVINGLCK 410

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S A   L  A   G  P   T+  +I       +   A  + + +   G+ P    
Sbjct: 411 MGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVIT 470

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN++L G  K    +D       +   G LP+  TY++LI++   A +   A  +L+E+ 
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIR 530

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCL 456
                P+   +  +++G+ + G+    +Q+ + M+    +      YN+MI+ F +   +
Sbjct: 531 NRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDM 590

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   F  M  +G +PD+ T+  +ID   K G  +   +   +  E G+ P  TT+  +
Sbjct: 591 DMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRV 650

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           IN L  Q R  +   ++  M   G++P  V 
Sbjct: 651 INCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 149/324 (45%), Gaps = 16/324 (4%)

Query: 317 IEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME---RSGVLPDEHT 372
           ++A ++F  +K E G K     Y  +++     G     E V+ EM     + +L  E  
Sbjct: 21  LKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLL--EGV 78

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y   +  Y   G+ + A  V + M+  + +P+ F Y+ I+    + G + +  +V   MK
Sbjct: 79  YVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G+ PD   + + I +F +      A+   + M S+G E + + + T+I   ++     
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A ELF +M   G FP   T+N ++++L ++   ++ ++LL  +   G+ PN+ T+   +
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258

Query: 553 DIYGQSGRFDDAIECLEGLSDQAV---NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
               + G        LEG + + V   N    M   GL+P +   N++I  + +  +  +
Sbjct: 259 QGLCRKG-------VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 610 AFAVLQYMKENGLKPDVVTYTTLM 633
           A  +L+  K  G  PD  TY +L+
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLI 335



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 16/143 (11%)

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ---GLLPNVVTYTTLVDIYGQS 558
           +E G+     TY  MI  LG    ++ ++R+L  MR      LL  V  Y + +  YG+ 
Sbjct: 32  KEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGV--YVSAMRNYGRK 89

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G+             +AV+ F  M     +PS  + N+++N   E     +A  V   MK
Sbjct: 90  GKVQ-----------EAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMK 138

Query: 619 ENGLKPDVVTYTTLMKALIRVDK 641
             G+ PDV T+T  +K+  R  +
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKR 161


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 226/497 (45%), Gaps = 37/497 (7%)

Query: 169 LIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
            +H L ++ +  EA  L +++  +L  + Y  +IS        E+A++ +S+MR      
Sbjct: 273 FVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIP 332

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + + Y +++    R  ++     +++   +  +      ++ N +I  + ++GD S A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRC--KRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGR-----TIE-AEAVFEELKESGLKPRTKAYNA 340
            L      G  P    Y  +I  +  + +      +E AE  + E+ ++ +       + 
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L +     G  + A  ++ EM   G +PD  TYS +I    NA + ++A ++ +EM+ +H
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+ F Y+ ++  +   G  Q+  +   EM   G  P+   Y  +I  + K   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG-------YF------ 507
             F+ MLSEG  P+ +T+  LID H K G+ ++A +++  M+          YF      
Sbjct: 571 ELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGN 630

Query: 508 ---PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY  +++ L +  + ++ + LL  M  +G  PN + Y  L+D + + G+ D+A
Sbjct: 631 IRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEA 690

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    Q V  F  M   G  P+    +SLI+   +D+R   A  VL  M EN   P
Sbjct: 691 ---------QMV--FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739

Query: 625 DVVTYTTLMKALIRVDK 641
           +V+ YT ++  L +V K
Sbjct: 740 NVIIYTEMIDGLCKVGK 756



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 225/546 (41%), Gaps = 84/546 (15%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           L+++ +  LGR + L          + + LTYNAL+      D L+ A  +  +M   G+
Sbjct: 212 LWNVALEELGRLKDL--------GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           + D       +  L +  +   +L       IE ++ +LD  +   +I G  +A    +A
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALAL-----IEKEEFKLDTVIYTQMISGLCEASLFEEA 318

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           M FL   +     P   TY  ++       +    + +   +   G  P  + +N+L+  
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI--------------------------D 378
           Y + G    A  ++ +M   G  P    Y++LI                          D
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 379 AY---------------ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           A+                 AG++E A  +++EM      P++  YS+++    +  +   
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F + +EMKS+ V PD   Y ++ID+F K   L  A   FD M+ +G  P+ +T+  LI 
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL- 542
            + K  +   A ELFE M   G  P   TY  +I+   +  + E   ++   MR    + 
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 543 ---------------PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
                          PN+ TY  LVD   ++ +  +A + L+           VM  +G 
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD-----------VMSVEGC 667

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
           +P+++  ++LI+ F +  +  EA  V   M E G  P+V TY++L+  L    R+D   K
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 645 VFSSYL 650
           V S  L
Sbjct: 728 VLSRML 733



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 226/504 (44%), Gaps = 48/504 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+  AFLL +  +   + P   TY  LI +  +   L++A     +M 
Sbjct: 483 YSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV 542

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   + + Y+ +I +  +  K+ S+   +L++ +  +    +      +I G  K+G 
Sbjct: 543 RDGCAPNVVTYTALIHAYLKARKMSSA--NELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA +     +G                    P   TY A++  L  + +  EA  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +   G +P    Y+AL+ G+ K+G L +A+ V ++M   G  P+ +TYS LID      
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL  M  +   PN  IY+ ++ G    G+    ++++  M+  G  P+   Y 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID FGK   +   +    +M ++G  P+ +T+  LI+     G  D A +L +EM++ 
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQT 840

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR-------LLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            Y+P         ++ G ++  E   R       LL  +     +P +  Y  L+D + +
Sbjct: 841 -YWP--------KHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCK 891

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +GR + A+E  + +S  +  ++     D         +SLI +     +  +AF +   M
Sbjct: 892 AGRLELALELHKXMS--SCTSYSAADKD-------LYSSLIESLSLASKVDKAFELYADM 942

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
            + G  P++  +  L+K LIR+++
Sbjct: 943 IKRGGIPELSIFFYLVKGLIRINR 966



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/612 (22%), Positives = 262/612 (42%), Gaps = 73/612 (11%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPSSL---NRVEFKLAESYRAVPAPLWHSLLKNLCS 138
           +  + +  F+  +S+ ++   L  S  S+   +RVE  LAE +    A L  SLL+    
Sbjct: 26  FKISTISRFICTSSSEDNLHGLVDSDFSVPESSRVESFLAEEF----AFLRDSLLETGSD 81

Query: 139 SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS-EKLYEAFLLSQRQRLTPLTYN 197
           + +S++ + +          C +  +L S +I   G       + FL   R++L      
Sbjct: 82  TGASVNKSVS--------GRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVV 133

Query: 198 ALISACARNDDLEKALNLMSKMRQDGY-HCDFINYSLV-IQSLTRTNKIDSSLLQKLYKE 255
            ++S   +N +L     + +  RQ GY H   + ++L+ +      +++    L+++  E
Sbjct: 134 DVLSL-VKNPELGVKFFIWAG-RQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE 191

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
              DK E+ G+LLN +I    + G  + A+  LG  + +G  P   TY A++     + R
Sbjct: 192 ---DK-EILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADR 247

Query: 316 TIEAEAVFEELKESG--------------------------------LKPRTKAYNALLK 343
              A  V  E+ +SG                                 K  T  Y  ++ 
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMIS 307

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G  +    ++A   +S M  S  +P+  TY +L+       +    + +L  M      P
Sbjct: 308 GLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP 367

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI------DTFGKYNCLH 457
           +  I++ ++  Y   G++   +++LK+M   G +P    YN++I      +     + L 
Sbjct: 368 SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLE 427

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A  A+  ML   +  + +  + L  C    G++++A  +  EM  +G+ P T+TY+ +I
Sbjct: 428 LAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVI 487

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            LL    + ++   L   M++  ++P+V TYT L+D +           C  GL  QA  
Sbjct: 488 GLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF-----------CKVGLLQQARK 536

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            F  M  DG  P+ +   +LI+A+ + ++ + A  + + M   G  P+VVTYT L+    
Sbjct: 537 WFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596

Query: 638 RVDKFHKVFSSY 649
           +  +  K    Y
Sbjct: 597 KSGQIEKACQIY 608


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 218/519 (42%), Gaps = 53/519 (10%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++AL  S K  EA   FL  +   L+P   TYN LI    R    +KA  L++ M 
Sbjct: 117 YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 176

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D  +Y  +I SL +   +  +L  KL+ E+    +  D    N +I GF K GD
Sbjct: 177 EQGFSPDVFSYGTLINSLAKNGYMSDAL--KLFDEMPERGVTPDVACYNILIDGFFKKGD 234

Query: 281 ASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              A      + +G  + P   +Y  +I  L   G+  E+  ++  +K++        Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G    G L  A  V  EM  +GV PD   Y+ +++ Y  AGR E    + K ME  
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354

Query: 400 HAK----------------------------------PNSFIYSRILAGYRDRGEWQRTF 425
             +                                   +S  Y  ++ G    G   +  
Sbjct: 355 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 414

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L+E ++   + DT  Y+ MI+   +   L       D+M   G +P+    N +I+  
Sbjct: 415 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGF 474

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +  + + A   F  M  +G FP   TYN +IN L + ER+ +   L+  M  +G  PN+
Sbjct: 475 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNM 534

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +TY+ L++   Q  + D            A+N +      G KP     N +I+      
Sbjct: 535 ITYSLLMNGLCQGKKLD-----------MALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  +A  +   MK+    P++VT+ TLM+   +V  F +
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFER 622



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 10/393 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LIH L  S  L  A  + +      ++P  + YN +++   R   +E+ L L   M 
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           ++G     ++Y+++I+ L    K+D ++ + +L  E +C     D      ++ G  K G
Sbjct: 353 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA---DSMTYGVLVHGLCKNG 408

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA+  L  A+       T  Y+++I  L   GR  E   V +++ + G KP     N
Sbjct: 409 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCN 468

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           A++ G+V+   L+DA      M   G  P   TY+ LI+  + A R+  A  ++KEM   
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KPN   YS ++ G     +      +  +    G +PD   +N++I        +  A
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 588

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  +  M      P+ +T NTL++  +K   ++RA ++++ + + G  P   +YNI +  
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKG 648

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L    R  D    L +   +G+LP  +T+  LV
Sbjct: 649 LCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 192/444 (43%), Gaps = 37/444 (8%)

Query: 234 VIQSLTRTNKIDSSL--LQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           VI++  + +  D +L   Q++++   C   I     LLN +I    ++    +A  F   
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI----ESNKWDEAESFFLY 139

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            + +GLSP   TY  +I       +  +A+ +   + E G  P   +Y  L+    K GY
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYS 409
           + DA  +  EM   GV PD   Y++LID +   G    ++ I  + ++     PN   Y+
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G++  +F++   MK +    D + Y+ +I        L  A   +  M   
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT--TYNIMINLLGEQERWE 527
           G+ PD + +NT+++ + + GR +   EL++ M++ G   C T  +YNI+I  L E  + +
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CRTVVSYNILIRGLFENAKVD 376

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------------------- 566
           +   +   +  +    + +TY  LV    ++G  + A+                      
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMI 436

Query: 567 ---CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
              C EG  D+       M   G KP+    N++IN F    +  +A      M   G  
Sbjct: 437 NGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF 496

Query: 624 PDVVTYTTLMKALIRVDKFHKVFS 647
           P VVTY TL+  L + ++F + ++
Sbjct: 497 PTVVTYNTLINGLSKAERFSEAYA 520



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/296 (19%), Positives = 120/296 (40%), Gaps = 44/296 (14%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           + S++  LC     +D    V+  + KH  C     + + +I+   R+ KL +A      
Sbjct: 432 YSSMINGLCRE-GRLDEVAGVLDQMTKHG-CKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++S+    T +TYN LI+  ++ +   +A  L+ +M   G+  + I YSL++  L +  K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +L       + C  +E                                G  P    +
Sbjct: 550 LDMAL------NLWCQALE-------------------------------KGFKPDVKMH 572

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L +SG+  +A  ++ E+K+    P    +N L++G+ K+   + A  +   + +
Sbjct: 573 NIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            G  PD  +Y++ +    +  R   A   L +       P +  ++ ++    D G
Sbjct: 633 YGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 212/467 (45%), Gaps = 18/467 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN L+ +C +   ++    L   M   G   +   ++++I  L  +  +D +  ++L+ +
Sbjct: 24  YNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDA--RELFDK 81

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +     E +      ++ G+ +AG  SK +  LG  + +G SP    Y  +I++    G+
Sbjct: 82  MPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGK 141

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL----PDEH 371
           T +AE + +E+++ GL P    +NA +      G + +A  +  +M+   VL    P+  
Sbjct: 142 TDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNII 201

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+L++  +   G  E AR + ++M+VS    N   Y+  L G    G+      VLKEM
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEM 261

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+EP+ + YN+++D   K   L  A      M S G+ PDT+T+ TL+  +   G+ 
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKV 321

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A  +  EM   G  P   T NI++  L ++ R  + + LL  M  +G + + VT   +
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFR---------VMRTDGLK---PSNLALNSLIN 599
           +D    +G+ D AIE + G+      A           V  +D  K   P  ++ +++I+
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIIS 441

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
              +  R  EA      M    L+PD   Y   + +  +  K    F
Sbjct: 442 GLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/512 (22%), Positives = 221/512 (43%), Gaps = 84/512 (16%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKAL 213
           C   E  + IL+    R+    +   LL + +RL      + YN LIS+  +    + A 
Sbjct: 87  CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI----ELDGQLLN 269
            L+ +MR+DG   D + ++  I +L  + K+  +   +++++++ D++    + +    N
Sbjct: 147 KLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA--SRIFRDMQIDEVLGLPQPNIITYN 204

Query: 270 DVIVGFAKAG--DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            ++ GF K G  + ++A+ F  M     L  +  +Y   +  L   G+ +EA+ V +E+ 
Sbjct: 205 LMLGGFCKEGMLEEARAL-FEKMKVSENLMNRE-SYNIWLLGLVRIGKLLEAQLVLKEMV 262

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           + G++P   +YN ++ G  K G L DA  ++  M  SGVLPD  TY+ L+  Y + G+  
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVS 322

Query: 388 SARIVLKEMEVSHAKPNSF-----IYSR------------------------------IL 412
            A  VL+EM      PN++     +YS                               ++
Sbjct: 323 EANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVI 382

Query: 413 AGYRDRGEWQRTFQVLKEMKSSG-----------------------VEPDTHFYNVMIDT 449
            G  + G+  +  +++  M + G                         PD   Y+ +I  
Sbjct: 383 DGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISG 442

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K   +  A   F  M+ + ++PD+  ++  I    K G+   A  + ++M+++G    
Sbjct: 443 LCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKT 502

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TYN +I  LG + +  ++  L+  MR +G+ P+V  Y  ++    + GR  DA   L+
Sbjct: 503 LQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLD 562

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
                       M   G+ P+  + + LI AF
Sbjct: 563 -----------EMLQKGISPNISSFSILIKAF 583



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 161/388 (41%), Gaps = 50/388 (12%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  ++ + +  GR      + +++  SG+ P T  +N L+      G L DA  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +M   G  P+E+++ +L+  Y  AG       +L EM      PN  +Y+ +++ +  
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI----EP 473
            G+     +++ EM+  G+ PD   +N  I        +  A   F  M  + +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFE---------------------------------- 499
           + IT+N ++    K G  + A  LFE                                  
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 500 -EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
            EM + G  P   +YNI+++ L +     D + L+  M + G+LP+ VTYTTL+  Y  +
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G+             +A N  R M  DG  P+N   N L+ +  ++ R +EA  +LQ M 
Sbjct: 319 GKV-----------SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E G   D VT   ++  L    K  K  
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAI 395



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 212/491 (43%), Gaps = 45/491 (9%)

Query: 117 LAESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           L E  R   +P   ++++L+ + C    + D A  +V  ++K  L     + ++  I AL
Sbjct: 114 LGEMRRLGFSPNKVVYNTLISSFCKEGKTDD-AEKLVDEMRKDGLSPDV-VTFNARISAL 171

Query: 174 GRSEKLYEAFLLSQRQRLTP---------LTYNALISACARNDDLEKALNLMSKMRQDGY 224
             S K+ EA  + +  ++           +TYN ++    +   LE+A  L  KM+    
Sbjct: 172 CSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
             +  +Y++ +  L R  K+  +  Q + KE+    +E +    N V+ G  K G    A
Sbjct: 232 LMNRESYNIWLLGLVRIGKLLEA--QLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA 289

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              + +    G+ P T TY  ++    ++G+  EA  V  E+   G  P     N LL  
Sbjct: 290 RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYS 349

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP- 403
             K G + +AE ++ +M   G + D  T +++ID   N G+ + A  ++  M    +   
Sbjct: 350 LWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAAL 409

Query: 404 ----NSFI------------------YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
               NS+I                  YS I++G    G      +   EM    ++PD+ 
Sbjct: 410 GNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSA 469

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF--- 498
            Y+V I +F K   +  A      M  +G      T+N+LI      G  ++  E++   
Sbjct: 470 IYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLI---MGLGSKNQIFEIYGLI 526

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +EM+ERG  P  + YN +++ L E  R +D   +L  M  +G+ PN+ +++ L+  + ++
Sbjct: 527 DEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKA 586

Query: 559 GRFDDAIECLE 569
             F    E  E
Sbjct: 587 CDFSAVDEIFE 597



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 181/424 (42%), Gaps = 40/424 (9%)

Query: 112 RVEFKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILI 170
           R+  +L  S   +P  + + +LL   C +   +  A  V+  + +   C       +IL+
Sbjct: 290 RMLMRLMTSSGVLPDTVTYTTLLHGYCHT-GKVSEANNVLREMMRDG-CSPNNYTCNILL 347

Query: 171 HALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDG-- 223
           ++L +  ++ EA  L Q+       +  +T N +I     N  L+KA+ +++ M   G  
Sbjct: 348 YSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSA 407

Query: 224 -------------------YHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
                                C  D I+YS +I  L +  ++  +  +K + E+    ++
Sbjct: 408 ALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEA--KKKFIEMMGKNLQ 465

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D  + +  I  F K G  S A R L   +  G +    TY ++I  L +  +  E   +
Sbjct: 466 PDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGL 525

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            +E++E G+ P    YN +L    + G +KDA  V+ EM + G+ P+  ++S+LI A+  
Sbjct: 526 IDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585

Query: 383 AGRWESARIVLK-EMEVSHAKPN--SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           A  + +   + +  + V   K    S  ++ +L G    GE  +  ++ +       +  
Sbjct: 586 ACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVG----GEVVKAKELFETALDRSFDVG 641

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              Y  +ID   K   L  A     +++ +G   D  ++  +ID   K G    A+EL E
Sbjct: 642 NFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAE 701

Query: 500 EMQE 503
           +M E
Sbjct: 702 KMME 705


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 209/470 (44%), Gaps = 61/470 (12%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +++S    ++ RT + +  L+    K++E + I  +   LN +I  F +      A   
Sbjct: 88  LVDFSRFFSAIARTKQFN--LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T T+  +I  L   G+  EA  + + + E+G +P    YN+++ G  +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G    A  ++ +ME   V  D  TYS +ID+    G  ++A  + KEME    K +   
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G+W     +LK+M S  + P+   +NV++D F K   L  A   +  M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 468 SEGIEPDTITWNTLIDCHF------------------KCG-----------------RYD 492
           + GI P+ IT+NTL+D +                   KC                  R D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              ++F  + +RG      TY+I++    +  + +  + L   M + G+LP+V+TY  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D    +G+ + A+E                        C  G  + A N F  +   G+K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P+ +    +I+   +    +EA  +L+ M+E+G  P+  TY TL++A +R
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 14/422 (3%)

Query: 146 AYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
           AY+V+  + K      YE     ++ LI  L    K+ EA +L  R      +   +TYN
Sbjct: 142 AYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           ++++   R+ D   AL+L+ KM +     D   YS +I SL R   ID+++   L+KE+E
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEME 255

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I+      N ++ G  KAG  +     L       + P   T+  ++      G+  
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +++E+   G+ P    YN L+ GY     L +A  ++  M R+   PD  T++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             Y    R +    V + +       N+  YS ++ G+   G+ +   ++ +EM S GV 
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y +++D       L  A+  F+ +    ++   + + T+I+   K G+ + A  L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F  +  +G  P   TY +MI+ L ++    +   LL  M   G  PN  TY TL+  + +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 558 SG 559
            G
Sbjct: 556 DG 557



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 216/476 (45%), Gaps = 18/476 (3%)

Query: 167 SILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +I+I+   R  K   A+ +L +  +L       T+N LI        + +A+ L+ +M +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G   D + Y+ ++  + R+   D+SL   L +++E   ++ D    + +I    + G  
Sbjct: 187 NGCQPDVVTYNSIVNGICRSG--DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             A+      +  G+     TY +++  L  +G+  +   + +++    + P    +N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L  +VK G L++A  +  EM   G+ P+  TY+ L+D Y    R   A  +L  M  +  
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            P+   ++ ++ GY          +V + +   G+  +   Y++++  F +   +  A  
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M+S G+ PD +T+  L+D     G+ ++A E+FE++Q+         Y  +I  + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  + ED   L  ++  +G+ PNV+TYT ++     SG       C +G   +A    R 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-----SGL------CKKGSLSEANILLRK 533

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
           M  DG  P++   N+LI A   D     +  +++ MK  G   D  +   ++  L+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           ++S++  +C S  +  LA  ++  +++ N+  +    YS +I +L R   +  A  L   
Sbjct: 196 YNSIVNGICRSGDT-SLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             ++  + + +TYN+L+    +         L+  M       + I +++++    +  K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +   +LYKE+    I  +    N ++ G+      S+A   L +      SP   T+
Sbjct: 314 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I       R  +   VF  + + GL      Y+ L++G+ + G +K AE +  EM  
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GVLPD  TY +L+D   + G+ E A  + ++++ S       +Y+ I+ G    G+ + 
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+P+   Y VMI    K   L  A     +M  +G  P+  T+NTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQER 525
            H + G    + +L EEM+  G+    ++  ++I++L  GE ++
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 214/459 (46%), Gaps = 27/459 (5%)

Query: 185 LSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           LS+R  L  +     T N LI+       +  A +++SK+ + GY  D +  + +I+ L 
Sbjct: 85  LSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLC 144

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
              ++  +L    + ++      LD      +I G  K G+   A++ L    G    P 
Sbjct: 145 LKGQVKKAL--HFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPN 202

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
              Y  +I  L       EA  +F E+   G+      Y+A++ G+  +G L +A   ++
Sbjct: 203 VVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLN 262

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM    + PD + Y+ L+DA    G+ + A+ VL  +  +  KPN   Y+ ++ GY    
Sbjct: 263 EMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA--- 319

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
             +  F  +  M   GV PD   YN+MI+   K   +  A+  +  M  + + P+T+T+N
Sbjct: 320 --KHVFNAVGLM---GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYN 374

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +LID   K GR   A +L +EM +RG+     TYN +IN L +  + +    L+  M+ Q
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434

Query: 540 GLLPNVVTYTTLVD-IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           G+ P++ T   L+  +  +  R  +A    +GL       F+ +   G  P+    N +I
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNA----QGL-------FQDLLDKGYHPNVYTYNIII 483

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               ++    EA+A+   M+++G  P+ +T+  ++ AL+
Sbjct: 484 YGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALL 522



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 27/445 (6%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF---- 183
           ++L N       I+LA++V+S + K    + Y+   +  + LI  L    ++ +A     
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILK----WGYQPDTVTLTTLIKGLCLKGQVKKALHFHD 157

Query: 184 -LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
            LL+Q  RL  ++Y  LI+   +  +   A+ L+ ++       + + Y+ +I  L +  
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK 217

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +  +    L+ E+    I  +    + +I GF   G  ++A+ FL       ++P    
Sbjct: 218 LVSEAC--NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYI 275

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++ AL   G+  EA+ V   + ++ LKP    YN L+ GY        A+ V + + 
Sbjct: 276 YNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVG 327

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV PD  +Y+++I+      R E A  + KEM   +  PN+  Y+ ++ G    G   
Sbjct: 328 LMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRIS 387

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             + ++ EM   G   +   YN +I+   K   L  A+A  ++M  +GI+PD  T N L+
Sbjct: 388 YAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILL 447

Query: 483 D---CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
               C  K  R   A+ LF+++ ++GY P   TYNI+I    ++   ++   L   M   
Sbjct: 448 HGLLCKGK--RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDS 505

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  PN +T+  ++    + G  D A
Sbjct: 506 GCSPNAITFKIIICALLEKGETDKA 530



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/367 (21%), Positives = 156/367 (42%), Gaps = 16/367 (4%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P    +  ++ + +         ++   L+   ++P     N L+  +  +G +  A  
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           V+S++ + G  PD  T + LI      G+ + A     ++     + +   Y  ++ G  
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             GE +   Q+L+ +     EP+   YN +ID   K   +  A   F  M  +GI  + +
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T++ +I      G+   A     EM  +   P    YN +++ L ++ + ++ K +L  +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299

Query: 537 RAQGLLPNVVTYTTLVDIY--------GQSGRFDDAIE--------CLEGLSDQAVNAFR 580
               L PNV+TY TL+D Y        G  G   D           C     ++A+N ++
Sbjct: 300 VKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYK 359

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M    + P+ +  NSLI+   +  R + A+ ++  M + G   +V+TY +L+  L +  
Sbjct: 360 EMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNG 419

Query: 641 KFHKVFS 647
           +  K  +
Sbjct: 420 QLDKAIA 426



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 160/373 (42%), Gaps = 35/373 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR--QRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ + +  +   A  L +R   RLT    + YN +I    +   + +A NL S+M 
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + YS +I       K+  +L      E+    I  D  + N ++    K G 
Sbjct: 231 VKGISANVVTYSAIIHGFCIVGKLTEAL--GFLNEMVLKAINPDVYIYNTLVDALHKEGK 288

Query: 281 ASKAMRFL--------------------GMAQGV-------GLSPKTATYAAVITALSNS 313
             +A   L                    G A+ V       G++P   +Y  +I  L   
Sbjct: 289 VKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKI 348

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            R  EA  +++E+ +  + P T  YN+L+ G  K G +  A  ++ EM   G   +  TY
Sbjct: 349 KRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITY 408

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ-VLKEMK 432
           + LI+     G+ + A  ++ +M+    +P+ +  + +L G   +G+  +  Q + +++ 
Sbjct: 409 NSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLL 468

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G  P+ + YN++I    K   L  A A   +M   G  P+ IT+  +I    + G  D
Sbjct: 469 DKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETD 528

Query: 493 RAEELFEEMQERG 505
           +AE+L  EM  RG
Sbjct: 529 KAEKLLCEMIARG 541



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 8/175 (4%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L +S ++  A+ L      +      +TYN+LI+   +N  L+KA+ L++KM+
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432

Query: 221 QDGYHCDFINYSLVIQSL-TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             G   D    ++++  L  +  ++ ++  Q L++++       +    N +I G  K G
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNA--QGLFQDLLDKGYHPNVYTYNIIIYGHCKEG 490

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
              +A       +  G SP   T+  +I AL   G T +AE +  E+   GL  R
Sbjct: 491 LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLLKR 545


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T L ++ L+   +R   ++ +L ++ KM+    +    +Y+ V+     T+K     +  
Sbjct: 165 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 219

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +YKEI+ DK E      + V+ G  +      A+ FL  ++   + P   ++ ++++   
Sbjct: 220 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A++ F  + + GL P   ++N L+ G   +G + +A  + S+M + GV PD  
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 335

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++L   +   G    A  V+++M      P+   Y+ +L G    G       +LK+M
Sbjct: 336 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 395

Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
            S G E ++    +VM+    K   +  A++ F++M ++G+ PD + ++ +I    K G+
Sbjct: 396 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 455

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D A  L++EM ++   P + T+  ++  L ++    + + LL ++ + G   ++V Y  
Sbjct: 456 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 515

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++D Y +SG       C+E    +A+  F+V+   G+ PS    NSLI  + + Q  AEA
Sbjct: 516 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKA 635
             +L  +K  GL P VV+YTTLM A
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDA 589



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 200/476 (42%), Gaps = 66/476 (13%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            YS V+  L R  K++ ++L    +  E   I       N ++ G+ K G    A  F  
Sbjct: 231 TYSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 288

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                GL P   ++  +I  L   G   EA  +  ++ + G++P +  YN L KG+  +G
Sbjct: 289 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-Y 408
            +  A  V+ +M   G+ PD  TY++L+      G  +   ++LK+M     + NS I  
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S +L+G    G       +  +MK+ G+ PD   Y+++I    K      A+  +D M  
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468

Query: 469 EGIEP-----------------------------------DTITWNTLIDCHFKCGRYDR 493
           + I P                                   D + +N +ID + K G  + 
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELF+ + E G  P   T+N +I    + +   + +++L  ++  GL P+VV+YTTL+D
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            Y   G            + ++++  R  M+ +G+ P+N+  + +        +      
Sbjct: 589 AYANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 636

Query: 613 VLQY------------MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           VL+             M+  G+ PD +TY T+++ L RV      F   +F  I K
Sbjct: 637 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF---VFLEIMK 689



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++  L R +KL +A L    S+ + + P  +++N+++S   +   ++ A +    + 
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G      +++++I  L     I  +L  +L  ++    +E D    N +  GF   G 
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 349

Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
            S A   +      GLSP   TY                                    +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +++ L  +GR  EA ++F ++K  GL P   AY+ ++ G  K+G    A ++  EM   
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            +LP+  T+  L+      G    AR +L  +  S    +  +Y+ ++ GY   G  +  
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++ K +  +G+ P    +N +I  + K   +  A    D +   G+ P  +++ TL+D 
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
           +  CG     +EL  EM+  G  P   TY+++   L             +ER +E  K+ 
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M ++G+ P+ +TY T++    +      A   LE           +M++  L  S+ 
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 698

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LI++        +A + +  ++E  +      YTTL+KA
Sbjct: 699 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 51/397 (12%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + ++S   +   +++AL+L ++M+ DG   D + YS+VI  L +  K D +L   LY E+
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 466

Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
            CDK                      +E              LD  L N VI G+AK+G 
Sbjct: 467 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+    +    G++P  AT+ ++I     +    EA  + + +K  GL P   +Y  
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
           L+  Y   G  K  + +  EM+  G+ P   TYS++        + E+   VL+E     
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645

Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                  ME     P+   Y+ I+            F  L+ MKS  ++  +  YN++ID
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +   Y  +  A +    +  + +      + TLI  H   G  + A +LF ++  RG+  
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
               Y+ +IN L  +    + K     M +QG+ P++
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 58/396 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-- 188
           +L  LC +   ID A ++ + ++   L  S +L+ YSI+IH L +  K   A  L     
Sbjct: 411 MLSGLCKTGR-IDEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467

Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +R+ P   T+ AL+    +   L +A +L+  +   G   D + Y++VI    ++  I+
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +L  +L+K +    I       N +I G+ K  + ++A + L + +  GL+P   +Y  
Sbjct: 528 EAL--ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE----- 360
           ++ A +N G T   + +  E+K  G+ P    Y+ + KG  +    ++   V+ E     
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645

Query: 361 -------MERSGVLPDEHTYSLLIDAYANAGRWESARIVL-----KEMEVSHA------- 401
                  ME  G+ PD+ TY+ +I           A + L     + ++ S A       
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705

Query: 402 ---------KPNSFIYS--------------RILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                    K +SFIYS               ++  +  +G+ +   ++  ++   G   
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               Y+ +I+   + + ++ +   F  MLS+GI PD
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 60/325 (18%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +++K+  L   T++YN++L  + +   + D   V  E++      +EHTYS ++D   
Sbjct: 188 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLC 240

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              + E A + L+  E     P+   ++ I++GY   G                      
Sbjct: 241 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 278

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                +D          A + F  +L  G+ P   + N LI+     G    A EL  +M
Sbjct: 279 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325

Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            + G  P + TYNI+    +LLG     WE ++    +M  +GL P+V+TYT L+    Q
Sbjct: 326 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 381

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G  D  +  L+   D     F +   + + P ++ L+ L        R  EA ++   M
Sbjct: 382 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 431

Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
           K +GL PD+V Y+ ++  L ++ KF
Sbjct: 432 KADGLSPDLVAYSIVIHGLCKLGKF 456



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 56/261 (21%)

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
           H+  ++ + S +LAG       QR F+ L+ +    ++ +     ++ ++F K+      
Sbjct: 116 HSSFSTLLVSHVLAG-------QRRFKELQVILEQLLQEEGTLCELLSNSFRKW------ 162

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                       E   + W+ L+    +    D +  + ++M+++     T +YN ++  
Sbjct: 163 ------------ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH 210

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-------------- 565
             E ++  DV + + +        N  TY+T+VD   +  + +DA+              
Sbjct: 211 FRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 263

Query: 566 ----------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G  D A + F  +   GL PS  + N LIN        AEA  +  
Sbjct: 264 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 323

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M ++G++PD VTY  L K  
Sbjct: 324 DMNKHGVEPDSVTYNILAKGF 344


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 155/602 (25%), Positives = 257/602 (42%), Gaps = 72/602 (11%)

Query: 92  SENSNSESASALASSPSSLNRVEFKLAESYRAVPAP---LWHSLLKNLCSSNSSIDLAYA 148
           S  + S  A    S   S++ VE +L E   +   P      S+L+  C+S    D A +
Sbjct: 157 SRCAMSPGALGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRK-FDKALS 215

Query: 149 VVS------WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
           V +      W+  H L        SIL+    +  ++ +AF L +R      RL   T+ 
Sbjct: 216 VFNEIYGRGWVDGHVL--------SILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFC 267

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI    R   ++KAL L  KM++ G+  D   Y  +I  L    +I+ +L   L  E++
Sbjct: 268 VLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKAL--HLLSEMK 325

Query: 258 CDKIELDGQLLNDVIVGFAKAGDA------------SKAMRFL--GMAQGV--GLSPKTA 301
              I+ D Q+L+ +I   ++  D             ++AM  L   +  G+  G S   A
Sbjct: 326 ELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKA 385

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y        N     E    F  + +  ++P T +++ ++ G    G L  A  +  +M
Sbjct: 386 YYLLXAMTGDNYTDNFEVNKFF--MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDM 443

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            R G   +   Y+ LID  +N+ R E   ++LKEM+ S  +P  F ++ I      R + 
Sbjct: 444 VRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDV 503

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                +++EM+  G EP    Y +++    K      A      M+ EG  PD + ++  
Sbjct: 504 TGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAA 563

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ID   K    D+A E+F ++  RGY P    YN +IN   + +R  +   +L  M A+GL
Sbjct: 564 IDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGL 623

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSDQAVN 577
           +P+VVTY  L+D + ++G  D A  CL                         G  D A++
Sbjct: 624 VPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIH 683

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK--PDVVTYTTLMKA 635
            +  MR  G  P+ ++  +LI+      +     A L Y +E G +  PD + Y  L+ +
Sbjct: 684 LWNEMRGKGCSPNRISFIALIHGLC---KCGWPDAALLYFREMGERETPDTIVYVALITS 740

Query: 636 LI 637
            I
Sbjct: 741 FI 742



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 237/550 (43%), Gaps = 53/550 (9%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHAL 173
           +  R   + L H +++N+ S   S  +AY   +W        HN CY+Y  + S L HA 
Sbjct: 84  QELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNWASDQGGFNHN-CYTYNAMASCLSHAR 142

Query: 174 GRSE-KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
             +   L    +++ R  ++P    A IS     D +E  L    +M   G+  D    +
Sbjct: 143 QNAPLSLLSMDIVNSRCAMSPGALGA-ISKSGSIDLVEMRLK---EMCDSGWEPDKYTLT 198

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            V+Q+   + K D +L   ++ EI   +  +DG +L+ +++ F+K G+  KA   +   +
Sbjct: 199 SVLQAYCNSRKFDKAL--SVFNEIY-GRGWVDGHVLSILVLTFSKCGEVDKAFELIERME 255

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
            +G+     T+  +I       R  +A  +F+++++SG  P    Y+AL+ G      ++
Sbjct: 256 DLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIE 315

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  ++SEM+  G+ PD    S LI   +     +  R++ + +E    +    +Y+ +L
Sbjct: 316 KALHLLSEMKELGIDPDIQILSKLIPYCSE--EVDIYRLIEERLEDLDTEAMLLLYNSVL 373

Query: 413 AG---------------------YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
            G                     Y D  E  + F V KEM    V P T  ++++ID   
Sbjct: 374 NGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMV-KEM----VRPXTTSFSIVIDGLC 428

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
               L  A++ F  M+  G + + + +N LID      R +    L +EM+  G+ P   
Sbjct: 429 NTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQF 488

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           T+N +   L  +E       ++  MR  G  P +  YT LV    +  R           
Sbjct: 489 THNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR----------- 537

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
           S +A N    M  +G  P  +A ++ I+ F + +   +A  + + +   G  PDVV Y T
Sbjct: 538 SAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNT 597

Query: 632 LMKALIRVDK 641
           L+    +V +
Sbjct: 598 LINGFCKVKR 607



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 180/439 (41%), Gaps = 58/439 (13%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-- 189
           ++  LC++   +DLA ++   + +   C    LLY+ LI  L  S +L E +LL +    
Sbjct: 423 VIDGLCNT-GKLDLALSLFRDMVRVG-CKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG 480

Query: 190 ---RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              R T  T+N++     R +D+  AL+++ +MR  G+     +Y+L+++ L +  +   
Sbjct: 481 SGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR--- 537

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                             +++A  FL      G  P    Y+A 
Sbjct: 538 ----------------------------------SAEACNFLAEMVREGFLPDIVAYSAA 563

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I          +A  +F ++   G  P   AYN L+ G+ K+  + +A  ++ EM   G+
Sbjct: 564 IDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGL 623

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           +P   TY+LLID +   G  + A   L  M     +PN   Y+ ++ G  + G       
Sbjct: 624 VPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIH 683

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  EM+  G  P+   +  +I    K      A+  F R + E   PDTI +  LI    
Sbjct: 684 LWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYF-REMGERETPDTIVYVALITSFI 742

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYN------IMINLLGEQERWEDVKRLLGNMRAQG 540
                  A E+ +EM  +G FP     N       ++ L  +     +VK L+    A+G
Sbjct: 743 SNKNPTLAFEILKEMVAKGKFPDPLDKNDLPLRDAILELAEDASTSSNVKNLI----AEG 798

Query: 541 LLPNVVTYTTLVDIYGQSG 559
            +P +V    L D+  + G
Sbjct: 799 RIPTIV---CLSDVGSEGG 814


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 11/374 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           L+ ++ G+      S A+  +     +G  P T T+  +I  L    +  EA A+ + + 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           + G +P    Y  ++ G  K G +  A  ++++ME + +  D   ++ +ID+       +
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  + KEME    +PN   YS +++     G W    Q+L +M    + P+   +N +I
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D F K      A    D M+   I+PD  T+N+LI+      R D+A+++FE M  +  F
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYN +I    + +R ED   L   M  +GL+ + VTYTTL+      G F D    
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI-----QGLFHD---- 372

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             G  D A   F+ M +DG+ P  +  + L++    + +  +A  V  YM+++ +K D+ 
Sbjct: 373 --GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430

Query: 628 TYTTLMKALIRVDK 641
            YTT+++ + +  K
Sbjct: 431 IYTTMIEGMCKAGK 444



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 185/399 (46%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LIH L    K  EA  L  R  QR   P  +TY  +++   +  D++ A NL++KM 
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D + ++ +I SL +   +D +L   L+KE+E   I  +    + +I      G 
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDAL--NLFKEMETKGIRPNVVTYSSLISCLCSYGR 234

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A + L       ++P   T+ A+I A    G+ +EAE + +++ +  + P    YN+
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     L  A+ +   M      PD  TY+ LI  +  + R E    + +EM    
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              ++  Y+ ++ G    G+     +V K+M S GV PD   Y++++D       L  A+
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             FD M    I+ D   + T+I+   K G+ D   +LF  +  +G  P   TYN MI+ L
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
             +   ++   LL  M+  G LP+  TY TL+  + + G
Sbjct: 475 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 208/447 (46%), Gaps = 17/447 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQK 251
           +T ++L++       +  A+ L+ +M + GY  D I ++ +I  L   NK   +  L+ +
Sbjct: 80  VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 139

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + +      +   G ++N    G  K GD   A   L   +   +      +  +I +L 
Sbjct: 140 MVQRGCQPNLVTYGVVVN----GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
                 +A  +F+E++  G++P    Y++L+      G   DA  ++S+M    + P+  
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T++ LIDA+   G++  A  +  +M      P+ F Y+ ++ G+       +  Q+ + M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S    PD   YN +I  F K   +      F  M   G+  DT+T+ TLI   F  G  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A+++F++M   G  P   TY+I+++ L    + E    +   M+   +  ++  YTT+
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++   ++G+ DD  +    LS             G+KP+ +  N++I+     +   EA+
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLS-----------LKGVKPNVVTYNTMISGLCSKRLLQEAY 484

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR 638
           A+L+ MKE+G  PD  TY TL++A +R
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLIRAHLR 511



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 201/429 (46%), Gaps = 13/429 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   +T+  LI     ++   +A+ L+ +M Q G   + + Y +V+  L +   ID  L 
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID--LA 168

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L  ++E  KIE D  + N +I    K      A+      +  G+ P   TY+++I+ 
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L + GR  +A  +  ++ E  + P    +NAL+  +VK G   +AE +  +M +  + PD
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LI+ +    R + A+ + + M      P+   Y+ ++ G+      +   ++ +
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 348

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM   G+  DT  Y  +I          +A   F +M+S+G+ PD +T++ L+D     G
Sbjct: 349 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 408

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + ++A E+F+ MQ+         Y  MI  + +  + +D   L  ++  +G+ PNVVTY 
Sbjct: 409 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 468

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           T++     SG       C + L  +A    + M+ DG  P +   N+LI A   D   A 
Sbjct: 469 TMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 517

Query: 610 AFAVLQYMK 618
           +  +++ M+
Sbjct: 518 SAELIREMR 526



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 11/373 (2%)

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K  D   ++  LG    +G  P   T ++++    +  R  +A A+ +++ E G +P T 
Sbjct: 56  KKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 115

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            +  L+ G        +A  +V  M + G  P+  TY ++++     G  + A  +L +M
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           E +  + +  I++ I+              + KEM++ G+ P+   Y+ +I     Y   
Sbjct: 176 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A      M+ + I P+ +T+N LID   K G++  AE+L ++M +R   P   TYN +
Sbjct: 236 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 295

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN     +R +  K++   M ++   P++ TY TL+  + +S R +D  E          
Sbjct: 296 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE---------- 345

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             FR M   GL    +   +LI     D     A  V + M  +G+ PD++TY+ L+  L
Sbjct: 346 -LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404

Query: 637 IRVDKFHKVFSSY 649
               K  K    +
Sbjct: 405 CNNGKLEKALEVF 417



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 179/401 (44%), Gaps = 8/401 (1%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P  + + ++ N       IDLA+ +++ ++   +  +  ++++ +I +L +   + +A  
Sbjct: 147 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIFNTIIDSLCKYRHVDDALN 205

Query: 185 L-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L     ++  R   +TY++LIS          A  L+S M +   + + + ++ +I +  
Sbjct: 206 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K   +  +KL+ ++    I+ D    N +I GF       KA +           P 
Sbjct: 266 KEGKFVEA--EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I     S R  +   +F E+   GL   T  Y  L++G    G   +A+ V  
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M   GV PD  TYS+L+D   N G+ E A  V   M+ S  K + +IY+ ++ G    G
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +    + +   +   GV+P+   YN MI        L  A A   +M  +G  PD+ T+N
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 503

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           TLI  H + G    + EL  EM+   +    +T  ++ N+L
Sbjct: 504 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 18/302 (5%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE---SARIVLKEMEVSHAKPNSFI 407
           L DA  +   M +S  LP    ++ L+ A A   +++   S  ++ K M++ + +P+   
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY-EPSIVT 81

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
            S +L GY           ++ +M   G  PDT  +  +I     +N    A+A  DRM+
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G +P+ +T+  +++   K G  D A  L  +M+          +N +I+ L +    +
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           D   L   M  +G+ PNVVTY++L+      GR+ DA + L  + ++ +N          
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---------- 251

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHK 644
            P+ +  N+LI+AF ++ +  EA  +   M +  + PD+ TY +L+       R+DK  +
Sbjct: 252 -PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310

Query: 645 VF 646
           +F
Sbjct: 311 MF 312



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G+  + +D   L G M     LP++  +  L+    +  +FD  I         ++    
Sbjct: 18  GKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI---------SLALLG 68

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G +PS + L+SL+N +   +R ++A A++  M E G +PD +T+TTL+  L
Sbjct: 69  KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 124


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 196/411 (47%), Gaps = 14/411 (3%)

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + ++G+    I Y+ ++ +LTR  +  S  +  L  ++  + ++ D  LLN +I  F+ +
Sbjct: 86  LTEEGHKPTLITYTTLVAALTRQKRFKS--IPALLSKVADNGMKPDSILLNAMINAFSDS 143

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKA 337
           G   +AM+     +  G  P T+TY  +I      GR  E+  + E + ++  +KP  + 
Sbjct: 144 GKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRT 203

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L++ +     L++A  V+ +M  SG+ PD  TY+ +  AYA  G  E A  ++ +M+
Sbjct: 204 YNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQ 263

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +  KPN      I++GY   G      + L  MK  GV P+   +N +I  +      +
Sbjct: 264 YNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTN 323

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
               A   M   GI+PD +T++T+++     G  D  EE+F +M + G  P    Y+I+ 
Sbjct: 324 GVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILA 383

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                  +    + LL +M   G+  NVV +TT++  +  +G+ D A    E + +    
Sbjct: 384 KGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEM--- 440

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                   G  P+     +LI  +GE ++  +A  +L  M+E G+ P++ T
Sbjct: 441 --------GTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMST 483



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 196/448 (43%), Gaps = 43/448 (9%)

Query: 169 LIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L++AL    K +EA      L  +  + T +TY  L++A  R    +    L+SK+  +G
Sbjct: 66  LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D I  + +I + + + K+D ++  K++++++    +      N +I GF   G   +
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAM--KIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYE 183

Query: 284 AMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +M+ L  M Q   + P   TY  +I A     +  EA  V  ++  SG++P    YN + 
Sbjct: 184 SMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMA 243

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           + Y + G  + AE ++ +M+ + V P+E T  ++I  Y   G    A   L  M+     
Sbjct: 244 RAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVH 303

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN  +++ ++ GY D  +     + L  M+  G++PD   ++ +++ +     + +    
Sbjct: 304 PNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEI 363

Query: 463 FDRMLSEGIEPD-----------------------------------TITWNTLIDCHFK 487
           F+ M+  GIEPD                                    + + T+I     
Sbjct: 364 FNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCA 423

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G+ DRA  L E+M E G  P   TY  +I   GE ++    + +L  M  +G++P + T
Sbjct: 424 AGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMST 483

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQA 575
              + D +   G F +A   L G  +++
Sbjct: 484 MQLVADAWRAIGLFKEANRILNGSEEES 511



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 167/340 (49%), Gaps = 12/340 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P +    A+I A S+SG+  EA  +F+++KE G KP T  YN L+KG+  +G   ++
Sbjct: 125 GMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYES 184

Query: 355 EFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
             ++  M +   V P++ TY++LI A+    + E A  VL +M  S  +P+   Y+ +  
Sbjct: 185 MKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMAR 244

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
            Y   GE ++  +++ +M+ + V+P+     ++I  + K   +  A+    RM   G+ P
Sbjct: 245 AYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHP 304

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           + + +N+LI  +      +  +E    M+E G  P   T++ ++N        ++ + + 
Sbjct: 305 NPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +M   G+ P++  Y+ L   Y ++G+   A   L  +S   V    V+ T         
Sbjct: 365 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFT--------- 415

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             ++I+ +    +   AF++ + M E G  P++ TY TL+
Sbjct: 416 --TIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLI 453



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 165/344 (47%), Gaps = 14/344 (4%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ AL   G+  EA+AVF  L E G KP    Y  L+    +    K    ++S++  +G
Sbjct: 66  LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD    + +I+A++++G+ + A  + ++M+    KP +  Y+ ++ G+   G    + 
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM 185

Query: 426 QVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+ M +   V+P+   YN++I  +     L  A     +M++ GI+PD +T+NT+   
Sbjct: 186 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + + G  ++AE L  +MQ     P   T  I+I+   ++    +  R L  M+  G+ PN
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPN 305

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN-AFRVMRTDGLKPSNLALNSLINAFGE 603
            V + +L+  Y            L+      V+ A  +M   G+KP  +  ++++NA+  
Sbjct: 306 PVVFNSLIKGY------------LDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSS 353

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
                    +   M + G++PD+  Y+ L K  +R  +  K  S
Sbjct: 354 AGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAES 397



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 25/290 (8%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           H  + L++A    G+   A+ V   +     KP    Y+ ++A    +  ++    +L +
Sbjct: 61  HARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSK 120

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +  +G++PD+   N MI+ F     +  AM  F +M   G +P T T+NTLI      GR
Sbjct: 121 VADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGR 180

Query: 491 YDRAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
              + +L E M Q+    P   TYNI+I     +++ E+   +L  M A G+ P+VVTY 
Sbjct: 181 PYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYN 240

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
           T+   Y Q+G  + A                          C EG   +A+     M+  
Sbjct: 241 TMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKEL 300

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           G+ P+ +  NSLI  + +          L  M+E G+KPDVVT++T+M A
Sbjct: 301 GVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNA 350



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 168/398 (42%), Gaps = 44/398 (11%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P  +  + + N  S +  +D A  +   ++++  C      Y+ LI   G   + YE+  
Sbjct: 128 PDSILLNAMINAFSDSGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIVGRPYESMK 186

Query: 184 ---LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              ++ Q + + P   TYN LI A      LE+A N++ KM   G   D + Y       
Sbjct: 187 LLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTY------- 239

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
                                         N +   +A+ G+  KA R +   Q   + P
Sbjct: 240 ------------------------------NTMARAYAQNGETEKAERLILKMQYNKVKP 269

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T   +I+     G   EA      +KE G+ P    +N+L+KGY+        +  +
Sbjct: 270 NERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEAL 329

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           + ME  G+ PD  T+S +++A+++AG  ++   +  +M  +  +P+   YS +  GY   
Sbjct: 330 TLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRA 389

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+ ++   +L  M   GV+ +   +  +I  +     +  A +  ++M   G  P+  T+
Sbjct: 390 GQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTY 449

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            TLI  + +  +  +AEE+   M+ERG  P  +T  ++
Sbjct: 450 ETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLV 487



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 8/194 (4%)

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           EA  L +   + P  +T++ +++A +    ++    + + M + G   D   YS++ +  
Sbjct: 327 EALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGY 386

Query: 239 TRTN--KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
            R    +   SLL  + K      ++ +  +   +I G+  AG   +A         +G 
Sbjct: 387 VRAGQPRKAESLLTSMSKY----GVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGT 442

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           SP   TY  +I     + +  +AE +   ++E G+ P       +   +  +G  K+A  
Sbjct: 443 SPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANR 502

Query: 357 VVSEMERSGVLPDE 370
           +++  E    L  E
Sbjct: 503 ILNGSEEESELDQE 516


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 217/519 (41%), Gaps = 53/519 (10%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L++AL  S K  EA   FL  +   L+P   TYN LI    R    +KA  L++ M 
Sbjct: 92  YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMW 151

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G+  D  +Y  +I SL +   +  +L  KL+ E+    +  D    N +I GF K GD
Sbjct: 152 GQGFSPDVFSYGTLINSLAKNGYMSDAL--KLFDEMPERGVTPDVACYNILIDGFFKKGD 209

Query: 281 ASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              A      + +G  + P   +Y  +I  L   G+  E+  ++  +K++        Y+
Sbjct: 210 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 269

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G    G L  A  V  EM  +GV PD   Y+ +++ Y  AGR E    + K ME  
Sbjct: 270 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329

Query: 400 HAK----------------------------------PNSFIYSRILAGYRDRGEWQRTF 425
             +                                   +S  Y  ++ G    G   +  
Sbjct: 330 GCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKAL 389

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +L+E ++   + DT  Y+ MI+   +   L       D+M   G +P+    N +I+  
Sbjct: 390 SILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGF 449

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +  + + A   F  M  +G FP   TYN +IN L + ER+ +   L+  M  +G  PN+
Sbjct: 450 VRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNM 509

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           +TY+ L++   Q  + D            A+N +      G KP     N +I+      
Sbjct: 510 ITYSLLMNGLCQGKKLD-----------MALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 558

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  +A  +   MK+    P++VT+ TLM+   +V  F +
Sbjct: 559 KVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFER 597



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 181/396 (45%), Gaps = 10/396 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LIH L  S  L  A  + +      ++P  + YN +++   R   +E+ L L   M 
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 327

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           ++G     ++Y+++I+ L    K+D ++ + +L  E +C     D      ++ G  K G
Sbjct: 328 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA---DSMTYGVLVHGLCKNG 383

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             +KA+  L  A+       T  Y+++I  L   GR  E   V +++ + G KP     N
Sbjct: 384 YLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCN 443

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           A++ G+V+   L+DA      M   G  P   TY+ LI+  + A R+  A  ++KEM   
Sbjct: 444 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KPN   YS ++ G     +      +  +    G +PD   +N++I        +  A
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDA 563

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  +  M      P+ +T NTL++  +K   ++RA ++++ + + G  P   +YNI +  
Sbjct: 564 LQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKG 623

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           L    R  D    L +   +G+LP  +T+  LV  Y
Sbjct: 624 LCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 190/445 (42%), Gaps = 37/445 (8%)

Query: 233 LVIQSLTRTNKIDSSL--LQKLYKEIECDK-IELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           LV  +  + +  D +L   Q++++   C   I     LLN +I    ++    +A  F  
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALI----ESNKWDEAESFFL 113

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             + +GLSP   TY  +I       +  +A+ +   +   G  P   +Y  L+    K G
Sbjct: 114 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNG 173

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIY 408
           Y+ DA  +  EM   GV PD   Y++LID +   G    ++ I  + ++     PN   Y
Sbjct: 174 YMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSY 233

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ G    G++  +F++   MK +    D + Y+ +I        L  A   +  M  
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT--TYNIMINLLGEQERW 526
            G+ PD + +NT+++ + + GR +   EL++ M++ G   C T  +YNI+I  L E  + 
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---CRTVVSYNILIRGLFENAKV 350

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-------------------- 566
           ++   +   +  +    + +TY  LV    ++G  + A+                     
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM 410

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C EG  D+       M   G KP+    N++IN F    +  +A      M   G 
Sbjct: 411 INGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGC 470

Query: 623 KPDVVTYTTLMKALIRVDKFHKVFS 647
            P VVTY TL+  L + ++F + ++
Sbjct: 471 FPTVVTYNTLINGLSKAERFSEAYA 495



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 21/290 (7%)

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  P   +Y+ L++A   + +W+ A       E     PN   Y+ ++     + ++ + 
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L  M   G  PD   Y  +I++  K   +  A+  FD M   G+ PD   +N LID 
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 485 HFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGE----QERWEDVKRLLGNMRAQ 539
            FK G    A E++E  ++    +P   +YN+MIN L +     E +E   R+  N R Q
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 263

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
            L     TY+TL  I+G  G          G  D A   ++ M  +G+ P  +  N+++N
Sbjct: 264 DL----YTYSTL--IHGLCG---------SGNLDGATRVYKEMAENGVSPDVVVYNTMLN 308

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +    R  E   + + M++ G +  VV+Y  L++ L    K  +  S +
Sbjct: 309 GYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIW 357


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 211/519 (40%), Gaps = 76/519 (14%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TYNAL+    R D L+ A  +  +M + G   D        Q+L +  K   +L   
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREAL--- 296

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
               IE +    +  L N +I G  +A    +AM FL   +     P   TY  ++    
Sbjct: 297 --SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           N  +    + +   +   G  P    +N+L+  Y K      A  ++ +ME+    P   
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414

Query: 372 TYSLLIDAYANAG-----------------------------------------RWESAR 390
            Y++LI +  + G                                         ++E A 
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            V+ EM  +   P++  YS ++    +    +  F + KEMK +GV PD + Y ++ID F
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A    D M+ +G EP  +T+ TLI  + K  +   A ELFE M  +G FP  
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLL----------------PNVVTYTTLVDI 554
            TY  +I+   +    E   ++   MR    +                PNVVTY  LVD 
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++ +  DA + LE            M  DG +P+ +  ++LI+ F +  +  EA  V 
Sbjct: 655 LCKAHKVKDARDLLE-----------TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             M E+G  P+V TY++L+  L    R+D   KV S  L
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 227/500 (45%), Gaps = 34/500 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + ++  AF L +  + T +     TY  LI   ++   +++A N + +M 
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG     + Y+ +I +  +  K+  S+  +L++ +       +      +I G+ K+G+
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKV--SVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609

Query: 281 ASKAMRFLGMAQG----------------VGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA +     +G                V   P   TY A++  L  + +  +A  + E
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +   G +P T  Y+AL+ G+ K   L +A+ V  +M   G  P+ +TYS LID      
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDK 729

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R +    VL +M  +   PN  IY+ ++ G     +    ++++  M+  G +P+   Y 
Sbjct: 730 RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYT 789

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID FGK   +   +  F  M S+G  P+ +T+  LI+     G  D A  L EEM++ 
Sbjct: 790 AMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT 849

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +    ++Y  +I   G +  +     LL  +   G  P ++ Y  L+D + ++GR + A
Sbjct: 850 YWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVA 907

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E    L  + ++A   M        NL   SLI +F    +   AF +   M  +G+ P
Sbjct: 908 LE----LHKEVISASMSMAAK----KNL-YTSLIYSFSYASKIGHAFELFYDMIRDGVIP 958

Query: 625 DVVTYTTLMKALIRVDKFHK 644
           D+ T+  L+  LIRV ++ +
Sbjct: 959 DLGTFVHLLMGLIRVRRWEE 978



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 190/438 (43%), Gaps = 49/438 (11%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++  +EI  D  E+ G+LLN +I    + G  + A+  LG  +  G  P   TY A++  
Sbjct: 191 EEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQV 250

Query: 310 LSNSGRTIEAEAVFEELKESGLK--------------------------------PRTKA 337
              + +   A+ V  E+ E GL                                 P T  
Sbjct: 251 FLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTIL 310

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  +  + ++A   ++ M  +  +P+  TY +L+    N  +    + +L  M 
Sbjct: 311 YNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL- 456
                P+  I++ ++  Y    ++   +++LK+M+    +P    YN++I +      L 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 457 -----HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
                  A  A++ MLS G   + +   +   C    G++++A ++  EM   G+ P T+
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTS 490

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY+ +I  L    R E+   L   M+  G++P+V TYT L+D + ++           G+
Sbjct: 491 TYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA-----------GI 539

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             QA N    M  DG +P+ +   +LI+A+ + ++ + A  + + M   G  P+V+TYT 
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+    +     K    Y
Sbjct: 600 LIDGYCKSGNIEKACQIY 617



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/509 (22%), Positives = 208/509 (40%), Gaps = 78/509 (15%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           ++ ++ FL   S  E+A  L           FK  +    VP    +++L +  S    I
Sbjct: 492 YSEVIGFLCNASRVENAFFL-----------FKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 144 DLAYAVVSWLQK--HNLCYSYELLYSILIHALGRSEKLY---EAFLLSQRQRLTP--LTY 196
             A+   +WL +   + C    + Y+ LIHA  +++K+    E F L   +   P  +TY
Sbjct: 541 KQAH---NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDF----------------INYSLVIQSLTR 240
            ALI    ++ ++EKA  + ++MR D    D                 + Y  ++  L +
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            +K+  +  + L + +  D  E +  + + +I GF KA    +A          G +P  
Sbjct: 658 AHKVKDA--RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV 715

Query: 301 ATYAAVIT-----------------------------------ALSNSGRTIEAEAVFEE 325
            TY+++I                                     LS   +T EA  +   
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++E G KP    Y A++ G+ K G +     +  EM   G  P+  TY++LI+     G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +L+EM+ ++   +   Y +++ GY+   E+  +  +L+E++ +G  P    Y V
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPIILLYKV 893

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +ID F K   L  A+     ++S  +        + +LI       +   A ELF +M  
Sbjct: 894 LIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIR 953

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            G  P   T+  ++  L    RWE+  +L
Sbjct: 954 DGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/377 (19%), Positives = 134/377 (35%), Gaps = 33/377 (8%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL   + +G     A Y A++            E    E++    +   K  N L++   
Sbjct: 158 FLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G    A   +  ++  G  P   TY+ L+  +  A + ++A++V +EM       + F
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                       G+W+    ++++       P+T  YN MI    + +    AM   +RM
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            S    P+  T+  L+       +  R + +   M   G +P  T +N +++   + + +
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------------- 565
               +LL  M      P  V Y  L+      G     +                     
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 566 -------ECLEGLS--DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                   CL G    ++A      M  +G  P     + +I       R   AF + + 
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 617 MKENGLKPDVVTYTTLM 633
           MK  G+ PDV TYT L+
Sbjct: 515 MKGTGVVPDVYTYTILI 531


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 169/395 (42%), Gaps = 24/395 (6%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G    G   + +       G G  P   TY  +I  L   G T  A  +   ++
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +   +P    Y +++    K   +  A  + SEM   G+ P   TY+ LI A  N   W+
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               +L EM  S   PN  I+S ++      G+      V+  M   GVEP+   YN ++
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D     + +  A+  FD M+ +G  PD ++++TLI+ + K  R ++A  LFEEM  +   
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P T TY+ +++ L    R +D   L   M  +G +P+ V+Y  L+D   ++ R D+AI  
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 431

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C  G  + A + F  + + GL P+      +IN   +
Sbjct: 432 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 491

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               AEA  +   MK  G  P+  TY  + +  +R
Sbjct: 492 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 156/357 (43%), Gaps = 26/357 (7%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A + F  +      P    +  LL    KM +      +  +M+  G+ P+ +T ++LI
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 378 DAYANAGRWESARIVL-KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +++ +  R   A  VL K +++ H +PN   ++ ++ G    G+      +  +M   G 
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 160

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+   Y  +I+   K      A+     M     +PD + + ++ID   K  +  +A  
Sbjct: 161 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 220

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF EM  +G  P   TYN +I+ L     W+ V  LL  M    ++PNVV ++T+VD   
Sbjct: 221 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 280

Query: 557 QSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNL 592
           + G+  +A +                        CL    D+AV  F  M   G  P  +
Sbjct: 281 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 340

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + ++LIN + + QR  +A  + + M    L P+ VTY+TLM  L  V +     + +
Sbjct: 341 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 192/412 (46%), Gaps = 13/412 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +L+  LC   S+   A  ++  +++ N C    ++Y+ +I +L +  ++ +AF L S+
Sbjct: 167 YGTLINGLCKVGST-SAAIRLLRSMEQGN-CQPDVVVYTSIIDSLCKDRQVTQAFNLFSE 224

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              Q ++P   TYN+LI A     + +    L+++M       + + +S V+ +L +  K
Sbjct: 225 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 284

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +  ++  + K      +E +    N ++ G     +  +A++        G +P   
Sbjct: 285 VMEAHDVVDMMIKR----GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 340

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y+ +I       R  +A  +FEE+    L P T  Y+ L+ G   +G L+DA  +  EM
Sbjct: 341 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 400

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G +PD  +Y +L+D      R + A  +LK +E S+  P+  IY+ ++ G    GE 
Sbjct: 401 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 460

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    +   + S G+ P+   Y +MI+   +   L  A   F  M  +G  P+  T+N +
Sbjct: 461 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
                +     R  +L +EM  RG+    +T  +++ +L +    + VK++L
Sbjct: 521 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 7/235 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI+   + +++ +A  L +   R+ L P  +TY+ L+        L+ A+ L  +M 
Sbjct: 342 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 401

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   DF++Y +++  L +  ++D ++   L K IE   ++ D Q+   VI G  +AG+
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAI--ALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          GL P   TY  +I  L   G   EA  +F E+K  G  P    YN 
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + +G+++         ++ EM   G   D  T ++L++  ++ G  +S + +L E
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 202/452 (44%), Gaps = 48/452 (10%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R T  TYN ++ +  +  ++++AL+L+ KM++ G +   + ++++I              
Sbjct: 234 RPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLIN------------- 280

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
                                   G +K G+  +A   +      GL     TY  +I  
Sbjct: 281 ------------------------GLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICG 316

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
               G  +EA A++EE+   G+ P   ++N ++ G+ K G + DA   +S+M +  ++PD
Sbjct: 317 YCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPD 376

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             +Y+ LI  +   G    A I+L E+   +   N   Y+ ++ G    G+ +   ++ +
Sbjct: 377 IISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKE 436

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M + G+ PD   Y V+++   K   +  A   FD ML  G+ PD   +   I    K G
Sbjct: 437 DMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLG 496

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
              +A +L EEM  +G+ P   TYN+ +N L +    E+   LL  M   G +P+ VTYT
Sbjct: 497 DTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYT 556

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + +  + ++G   +  E            F  M + G  P+ +    LI+A   + R   
Sbjct: 557 SFMHAHMENGHLREGRE-----------IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDW 605

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A A    M+E G+ P+V+TY  L+    +V K
Sbjct: 606 AMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 218/522 (41%), Gaps = 58/522 (11%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++++L + C     +  A  +V  +Q+   CY  E+ +++LI+ L +  +L +A  L Q 
Sbjct: 240 YNTMLHSFCKG-GEVQRALDLVPKMQERG-CYPSEVTFNVLINGLSKKGELQQAKGLIQE 297

Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                 R++P TYN LI    +   L +AL L  +M   G      ++            
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH------------ 345

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
                                    N ++ GF K G  S A + L       L P   +Y
Sbjct: 346 -------------------------NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I      G   EA  + +EL+   L      YN L+ G  ++G L+ A  +  +M  
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ PD  TY++L++     G    A+    EM      P+ F Y+  + G    G+  +
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F++ +EM + G  PD   YNV ++   K   L  A     +M+ +G  PD +T+ + + 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
            H + G      E+F +M  RG  P   TY ++I+      R +        M+ +G++P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NV+TY  L++ + +  + D           QA   F  M+  G+ P+      LIN    
Sbjct: 621 NVITYNVLINGFCKVRKMD-----------QACKFFIEMQEKGIFPNKYTYTILINENCN 669

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             +  EA  +   M    ++PD  T+  L+K L   DK +KV
Sbjct: 670 MGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL---DKDYKV 708



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 149/370 (40%), Gaps = 42/370 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+   R   + EAF+L    R   L     TYN LI    R  DLE AL L   M 
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G H D + Y++++                                      G  K G+
Sbjct: 440 NRGIHPDVVTYTVLVN-------------------------------------GACKLGN 462

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A  F      VGL+P    Y A I      G T +A  + EE+   G  P    YN 
Sbjct: 463 MLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNV 522

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            + G  K+G L++A  ++ +M R G +PD  TY+  + A+   G     R +  +M    
Sbjct: 523 FVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG 582

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P    Y+ ++  +   G          EM+  GV P+   YNV+I+ F K   +  A 
Sbjct: 583 QTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQAC 642

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  M  +GI P+  T+  LI+ +   G++  A  L+ +M  +   P + T+  ++  L
Sbjct: 643 KFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702

Query: 521 GEQERWEDVK 530
            +  + + V+
Sbjct: 703 DKDYKVQAVQ 712



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 24/342 (7%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VFE++  +   P  K  N +LK       L  A  V   M   G+ P   TY+ ++ ++ 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G  + A  ++ +M+     P+   ++ ++ G   +GE Q+   +++EM  +G+    +
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +I  + K   L  A+A ++ M++ G+ P   + NT++    K G+   A +   +M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            ++   P   +YN +I          +   LL  +R + L  N+VTY TL+D   + G  
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 562 DDAIECLEGLSDQAVNA------------------------FRVMRTDGLKPSNLALNSL 597
           + A++  E + ++ ++                         F  M   GL P   A  + 
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           I    +    A+AF + + M   G  PDV+TY   +  L ++
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 15/301 (4%)

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ GY+    L     V  +M R+  LPD    + ++    +      A  V + M  
Sbjct: 175 DVLIGGYLNYQCL----LVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGE 230

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P    Y+ +L  +   GE QR   ++ +M+  G  P    +NV+I+   K   L  
Sbjct: 231 YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQ 290

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M   G+     T+N LI  + K G    A  L+EEM  RG  P   ++N ++ 
Sbjct: 291 AKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY 350

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              ++ +  D ++ L +M  + L+P++++Y TL+  + + G   +A   L+ L       
Sbjct: 351 GFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL------- 403

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               R   L  + +  N+LI+          A  + + M   G+ PDVVTYT L+    +
Sbjct: 404 ----RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 639 V 639
           +
Sbjct: 460 L 460



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 7/199 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++ ++ L +   L EA  L Q   R    P  +TY + + A   N  L +   +   M 
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+++I +     ++D ++    + E++   +  +    N +I GF K   
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAM--AYFLEMQEKGVVPNVITYNVLINGFCKVRK 637

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +F    Q  G+ P   TY  +I    N G+  EA  ++ ++    ++P +  + A
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA 697

Query: 341 LLKGYVKMGYLKDAEFVVS 359
           LLK   K   ++  +F+ S
Sbjct: 698 LLKKLDKDYKVQAVQFIES 716


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 205/448 (45%), Gaps = 15/448 (3%)

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
            +N D+ KA  ++ +M  +G     + Y   I  L R   ++ +L  +L +++      L
Sbjct: 264 GKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFAL--RLIRDLRIRNQPL 321

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +    N VI  F + G+  +A   L   +  G+SP   +Y+ +I  L   G+  +A  + 
Sbjct: 322 NSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLI 381

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           EE+ +S +KP    Y++L  G  K G  + +  +   +   G   D  +Y+ LI+ +   
Sbjct: 382 EEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQ 441

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
               SA  ++ EM ++ + PNSF ++R++ G+  R    +  +V   M   GV+ +    
Sbjct: 442 RDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTC 501

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           N+M D F +      A+   + +   GI P++ T+N +I    K  + ++A E+   M +
Sbjct: 502 NIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLK 561

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
              FPC   YN +I+   +Q        L   M   G+ P++VTYT L++++    +   
Sbjct: 562 NNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKM-- 619

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                     +A   F+ M   GL P  +    +I  F +      A+A+ + M + G  
Sbjct: 620 ---------QEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKS 670

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYLF 651
           P+VVTYT L+    ++ +  K  + +LF
Sbjct: 671 PNVVTYTCLIDGYFKIKRMDK--ADFLF 696



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 208/491 (42%), Gaps = 49/491 (9%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYK 254
           N LI   A N+ L  A ++  + R+ G   + ++ + ++      N+ +   SL ++L  
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 255 EIECDKIELDGQLLNDVIVG-FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                 +     ++N    G F K  D  KA   L   +  G SP   TY A I  L  +
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  +  +L+       +  YNA++  + + G L +A  ++ +M   G+ P  ++Y
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG-------------- 419
           S+LID     G+ E A  +++EM  S+ KP+   YS +  G    G              
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 420 -----------------EWQRTF----QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                              QR      +++ EM+ +G  P++  +N +I  F K   L  
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  F  ML  G++ +  T N + D   + G +  A +L  E+Q+ G  P + TYNI+I 
Sbjct: 482 ALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIK 541

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L ++++ E    +L  M    + P  + Y TL+D Y +                +A+  
Sbjct: 542 WLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSN-----------PTKALLL 590

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +  M   G+ PS +    LIN F    +  EA+ + + M + GL PD + +T ++    +
Sbjct: 591 YAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCK 650

Query: 639 VDKFHKVFSSY 649
           V      ++ Y
Sbjct: 651 VGDMKSAWALY 661



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 200/499 (40%), Gaps = 72/499 (14%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ--RQRLTPLT---YNALISACARNDDLEKALNLMSKMR 220
           Y   IH L R+  +  A  L +  R R  PL    YNA+I    RN +L +A  L+  MR
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G      +YS++I                                      G  K G 
Sbjct: 351 SHGISPTAYSYSILID-------------------------------------GLCKKGQ 373

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA+  +       + P   TY+++   L  SG T  + ++F  L   G K    +YN 
Sbjct: 374 VEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNT 433

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+V    +  A  +V EM  +G +P+  T++ LI  +    R + A  V   M    
Sbjct: 434 LINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVG 493

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            + N F  + +   +   G +    +++ E++  G+ P+++ YN++I    K      A 
Sbjct: 494 VQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAW 553

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                ML   + P  I +NTLID + K     +A  L+ +M + G  P   TY ++IN+ 
Sbjct: 554 EVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMF 613

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
             + + ++   L   M  +GL+P+ + +T ++  + + G    A    E +S        
Sbjct: 614 SNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNV 673

Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLI---NAFGEDQRDAEAFAV 613
                           D+A   F  M+ D + P  L   +LI    + G   R  E F  
Sbjct: 674 VTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMF-- 731

Query: 614 LQYMKENGLKPDVVTYTTL 632
              MKENG+ P+   Y TL
Sbjct: 732 -NEMKENGVFPNYTAYATL 749



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 33/200 (16%)

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           I  N LI    +      A ++F + +  G      + N ++N   E  + E ++ L   
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238

Query: 536 MRAQGLLPNVVTYTTLVDIY--GQSGRFDDAIECLEGLSDQAVN---------------- 577
           ++  G  PNV TYT +++ Y  G  G+  D ++  E L +  +N                
Sbjct: 239 LKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298

Query: 578 --------AFRVMRTDGLKPSNLALNS-----LINAFGEDQRDAEAFAVLQYMKENGLKP 624
                   A R++R   L+  N  LNS     +I+ F  +    EAF +L+ M+ +G+ P
Sbjct: 299 CRAGCVEFALRLIRD--LRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 625 DVVTYTTLMKALIRVDKFHK 644
              +Y+ L+  L +  +  K
Sbjct: 357 TAYSYSILIDGLCKKGQVEK 376


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 209/470 (44%), Gaps = 61/470 (12%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +++S    ++ RT + +  L+    K++E + I  +   LN +I  F +      A   
Sbjct: 88  LVDFSRFFSAIARTKQFN--LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T T+  +I  L   G+  EA  + + + E+G +P    YN+++ G  +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G    A  ++ +ME   V  D  TYS +ID+    G  ++A  + KEME    K +   
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G+W     +LK+M S  + P+   +NV++D F K   L  A   +  M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 468 SEGIEPDTITWNTLIDCHF------------------KCG-----------------RYD 492
           + GI P+ IT+NTL+D +                   KC                  R D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              ++F  + +RG      TY+I++    +  + +  + L   M + G+LP+V+TY  L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D    +G+ + A+E                        C  G  + A N F  +   G+K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P+ +    +I+   +    +EA  +L+ M+E+G  P+  TY TL++A +R
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 14/422 (3%)

Query: 146 AYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
           AY+V+  + K      YE     ++ LI  L    K+ EA +L  R      +   +TYN
Sbjct: 142 AYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           ++++   R+ D   AL+L+ KM +     D   YS +I SL R   ID+++   L+KE+E
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEME 255

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              I+      N ++ G  KAG  +     L       + P   T+  ++      G+  
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  +++E+   G+ P    YN L+ GY     L +A  ++  M R+   PD  T++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
             Y    R +    V + +       N+  YS ++ G+   G+ +   ++ +EM S GV 
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y +++D       L  A+  F+ +    ++   + + T+I+   K G+ + A  L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F  +  +G  P   TY +MI+ L ++    +   LL  M   G  PN  TY TL+  + +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555

Query: 558 SG 559
            G
Sbjct: 556 DG 557



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 202/443 (45%), Gaps = 13/443 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI        + +A+ L+ +M ++G   D + Y+ ++  + R+   D+SL   L +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG--DTSLALDLLR 217

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++E   ++ D    + +I    + G    A+      +  G+     TY +++  L  +G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  +   + +++    + P    +N LL  +VK G L++A  +  EM   G+ P+  TY+
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+D Y    R   A  +L  M  +   P+   ++ ++ GY          +V + +   
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   Y++++  F +   +  A   F  M+S G+ PD +T+  L+D     G+ ++A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+FE++Q+         Y  +I  + +  + ED   L  ++  +G+ PNV+TYT ++  
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-- 515

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
              SG       C +G   +A    R M  DG  P++   N+LI A   D     +  ++
Sbjct: 516 ---SGL------CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566

Query: 615 QYMKENGLKPDVVTYTTLMKALI 637
           + MK  G   D  +   ++  L+
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLL 589



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 182/397 (45%), Gaps = 9/397 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           ++S++  +C S  +  LA  ++  +++ N+  +    YS +I +L R   +  A  L   
Sbjct: 196 YNSIVNGICRSGDT-SLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             ++  + + +TYN+L+    +         L+  M       + I +++++    +  K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +   +LYKE+    I  +    N ++ G+      S+A   L +      SP   T+
Sbjct: 314 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I       R  +   VF  + + GL      Y+ L++G+ + G +K AE +  EM  
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GVLPD  TY +L+D   + G+ E A  + ++++ S       +Y+ I+ G    G+ + 
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+P+   Y VMI    K   L  A     +M  +G  P+  T+NTLI 
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            H + G    + +L EEM+  G+    ++  ++I++L
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 2/202 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+ L+    ++  ++ A  L  +M   G   D + Y +++  L    K++ +L  +++
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL--EIF 461

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           ++++  K++L   +   +I G  K G    A          G+ P   TY  +I+ L   
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  +  +++E G  P    YN L++ +++ G L  +  ++ EM+  G   D  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 374 SLLIDAYANAGRWESARIVLKE 395
            ++ID   +A +  + R  L +
Sbjct: 582 KMVIDMLLSAMKRLTLRYCLSK 603


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 173/390 (44%), Gaps = 8/390 (2%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N ++   AK    S  +         G+ P   T   +I +  +  R   A +V  ++ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           + G +P T  +  L++G    G + +A  +  +M   G  PD  TY  LI+     G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
           +A  +L  M   + +PN F Y+ I+       +    F +  EM + G+ PD   YN +I
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
                     H     + M+   I PD +++NT++D   K G+   A ++ ++M +RG  
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P   TY  +++        ++  ++   M  +G +PNV++Y TL++ Y +  R D AI  
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363

Query: 567 -------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C     D+AV  F  M   G  P+ ++ N+LIN + + QR  +A  +   M  
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             L PD VTY+TL+  L  V++     + +
Sbjct: 424 QELIPDTVTYSTLIHGLCHVERLQDAIALF 453



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 210/487 (43%), Gaps = 45/487 (9%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T + LI++    + +  A ++++K+ + G+  D   ++ +I+ +    KI  +L   L+ 
Sbjct: 98  TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEAL--HLFD 155

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  +    D      +I G  K G+ S A+R LG        P    Y  +I +L    
Sbjct: 156 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR 215

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +F E+   G+ P    YN+L+     +   K    +++EM  S ++PD  +++
Sbjct: 216 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 275

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            ++DA    G+   A  V+ +M     +PN   Y+ ++ G+    E     +V   M   
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335

Query: 435 GVEPDTHFYNVMIDTFGK-------------------YNCLHHAMAAFDRMLSEGIEPDT 475
           G  P+   YN +I+ + K                   Y  +  A+  FD M+ +G  P+ 
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNV 395

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           I++NTLI+ + K  R D+A  LF EM  +   P T TY+ +I+ L   ER +D   L   
Sbjct: 396 ISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 455

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGL 571
           M A   +PN+VTY  L+D   ++    +A+                         C  G 
Sbjct: 456 MVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 515

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            + A + F  + + GL+P     + +IN         EA  + + M ENG   +   Y T
Sbjct: 516 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNT 575

Query: 632 LMKALIR 638
           + +  +R
Sbjct: 576 ITRGFLR 582



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 171/422 (40%), Gaps = 29/422 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +I +  ++  + +A NL S+M   G   D   Y+ +I +L   N  +   +  L  E
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC--NLCEWKHVATLLNE 261

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   KI  D    N V+    K G  ++A   +      G+ P   TY A++        
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKM-----------------GYLK--DAEF 356
             EA  VF+ +   G  P   +YN L+ GY K+                  YL   +A  
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           V   M   G +P+  +Y+ LI+ Y    R + A  +  EM      P++  YS ++ G  
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                Q    +  EM +    P+   Y +++D   K   L  AMA    +    ++PD  
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
             N  ID   + G  + A +LF  +  +G  P   TY+IMIN L  +   ++  +L   M
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------FRVMRTDGLK 588
              G   N   Y T+   + ++     AI+ L+ +  +  +A         +++  DGL 
Sbjct: 562 DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLD 621

Query: 589 PS 590
            S
Sbjct: 622 QS 623



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/394 (22%), Positives = 172/394 (43%), Gaps = 26/394 (6%)

Query: 166 YSILIHALGR-SEKLYEAFLLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIHAL    E  + A LL++    ++ P  +++N ++ A  +   + +A +++ KM 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y+ ++      +++D ++  K++  + C     +    N +I G+ K   
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAV--KVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 281 ASKAMRF----------LGMAQGV---------GLSPKTATYAAVITALSNSGRTIEAEA 321
             KA+ +          L M + V         G  P   +Y  +I       R  +A  
Sbjct: 357 IDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 416

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F E+    L P T  Y+ L+ G   +  L+DA  +  EM     +P+  TY +L+D   
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                  A  +LK +E S+  P+  + +  + G    GE +    +   + S G++PD  
Sbjct: 477 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVW 536

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y++MI+   +   L  A   F  M   G   +   +NT+     +     RA +L +EM
Sbjct: 537 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 596

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             RG+    +T  + + +L +    + +K++L N
Sbjct: 597 VARGFSADASTMTLFVKMLSDDGLDQSLKQILRN 630


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 200/452 (44%), Gaps = 17/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    +Y  LI        + +AL L+  M  DG   +   Y+L+I+ L +  +I  +  
Sbjct: 246 RRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDA-- 303

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           + L  E+    +       N +I G+ K+G    A+    + +  G +P   TY ++I  
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYG 363

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+  EAE +       G  P    +  L+ GY K   + DA  V S M  S    D
Sbjct: 364 LCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y +LI+      R + A+  L EM  +   PN   Y+ I+ GY   G      +V K
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M+  G  P+   Y  +I    +   LH AMA   +M  +GI P  IT+ TLI    K  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +D A  LFE M++ G  P    YN++ + L +  R E+    L     +G++   VTYT
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYT 599

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +LVD + ++G  D A   +E            M  +G K      + L+ A  + ++  E
Sbjct: 600 SLVDGFSKAGNTDFAAVLIEK-----------MVNEGCKADLYTYSVLLQALCKQKKLNE 648

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A ++L  M  +G+K ++V YT ++  +I+  K
Sbjct: 649 ALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 173/388 (44%), Gaps = 49/388 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P T TY  +I A    G    A   F  L+ESG++  T   NALL GY +   L+ A
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
            +++  M   G   +E++Y++LI     A     A +++  M       N   Y+ ++ G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKG 293

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G       +L EM   GV P    YN MID + K   +  A+     M   G  PD
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 475 TITWNTLIDCHFKC-GRYDRAEELFEEMQERGYFPCTTT--------------------- 512
             T+N+LI  +  C G+ D AEEL      RG+ P   T                     
Sbjct: 354 DWTYNSLI--YGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVK 411

Query: 513 --------------YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
                         Y ++IN+L ++ R ++ K  L  M A GL PNVVTYT+++D Y   
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGY--- 468

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C  G+   A+  F++M  +G  P+     SLI    +D++  +A A++  M+
Sbjct: 469 --------CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E+G+ P V+TYTTL++   +  +F   F
Sbjct: 521 EDGITPGVITYTTLIQGQCKKHEFDNAF 548



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 229/522 (43%), Gaps = 24/522 (4%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           L++ LC +    +    V+ ++  H+ C      Y++LI  L +  ++++A  L     L
Sbjct: 255 LIQGLCEARCVREAL--VLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 192 TPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             +     TYNA+I    ++  ++ AL + + M Q+G + D   Y+ +I  L    K+D 
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDE 371

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +  ++L                 ++I G+ KA     A+R                Y  +
Sbjct: 372 A--EELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVL 429

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L    R  EA+    E+  +GL P    Y +++ GY K+G +  A  V   ME  G 
Sbjct: 430 INVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGC 489

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  TY  LI       +   A  ++ +M+     P    Y+ ++ G   + E+   F+
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 549

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + + M+ +G+ PD   YNV+ D   K      A  A+  ++ +G+    +T+ +L+D   
Sbjct: 550 LFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFS 606

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G  D A  L E+M   G      TY++++  L +Q++  +   +L  M   G+  N+V
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
            YT ++          + I+  EG  D A + F  M + G KPS       I+++ +  R
Sbjct: 667 AYTIIIS---------EMIK--EGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
             EA  ++  M+ +G+ PDVVTY   +     +    + FS+
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFST 757



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 235/563 (41%), Gaps = 65/563 (11%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--------LLSQRQRLTPLTYNAL 199
           A++  L +     +Y+ L   +I   G +E + EA         +  +R  L+P  YN  
Sbjct: 91  ALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLA 150

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           + +  R D  E    L S + Q+G   D + Y+ +I +  +   +  ++  + +  +   
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSL--AIAHRYFCLLRES 208

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +++D    N +++G+ +  D  KA   L M   +G      +Y  +I  L  +    EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +   +   G       Y  L+KG  K G + DA  ++ EM   GV+P   TY+ +ID 
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 380 YANAGRWESARIVLKEMEVSHAKP-----NSFIY-------------------------- 408
           Y  +GR + A  +   ME +   P     NS IY                          
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTV 388

Query: 409 ---SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              + ++ GY          +V   M SS  + D   Y V+I+   K   L  A    + 
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M + G+ P+ +T+ ++ID + K G    A E+F+ M+  G  P   TY  +I  L + ++
Sbjct: 449 MFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLS--DQAVN- 577
                 L+  M+  G+ P V+TYTTL+    +   FD+A    E     GL+  +QA N 
Sbjct: 509 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 568

Query: 578 -------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                        A+  +   G+  + +   SL++ F +      A  +++ M   G K 
Sbjct: 569 LTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 625 DVVTYTTLMKALIRVDKFHKVFS 647
           D+ TY+ L++AL +  K ++  S
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALS 651



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 217/494 (43%), Gaps = 15/494 (3%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + ++ LI+   ++E++ +A      ++S   +L    Y  LI+   +   L++A   +++
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M  +G   + + Y+ +I    +   + ++L  +++K +E +    +      +I G  + 
Sbjct: 449 MFANGLAPNVVTYTSIIDGYCKVGMVGAAL--EVFKLMEHEGCHPNAWTYGSLIYGLIQD 506

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               KAM  +   Q  G++P   TY  +I           A  +FE ++++GL P  +AY
Sbjct: 507 KKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAY 566

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L     K G    AE   S + R GV+  + TY+ L+D ++ AG  + A +++++M  
Sbjct: 567 NVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 623

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              K + + YS +L     + +      +L +M  SGV+ +   Y ++I    K     H
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A + F+ M+S G +P   T+   I  + K GR + AE L  EM+  G  P   TYNI IN
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-----D 573
             G     +     L  M      PN  TY  L+  + +    +       G+      +
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                   M   GL P+ +  +S+I  F +  R  EA  +L +M    + P+   YT L+
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863

Query: 634 KALIRVDKFHKVFS 647
           K    +  F K  S
Sbjct: 864 KCCCDIKLFGKAVS 877



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 189/431 (43%), Gaps = 57/431 (13%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           E  Y++L  AL   GR+E+ Y +FL+ +   LT +TY +L+   ++  + + A  L+ KM
Sbjct: 563 EQAYNVLTDALCKSGRAEEAY-SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 621

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             +G   D   YS+++Q+L +  K++ +L                  +L+ + V      
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEAL-----------------SILDQMTVS----- 659

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                          G+      Y  +I+ +   G+   A+++F E+  SG KP    Y 
Sbjct: 660 ---------------GVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
             +  Y K+G +++AE ++ EMER GV PD  TY++ I+   + G  + A   LK M  +
Sbjct: 705 VFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDA 764

Query: 400 HAKPNSFIY----------SRILAGYRD-RGEWQ-----RTFQVLKEMKSSGVEPDTHFY 443
             +PN + Y          S I A Y D  G W        +Q+L+ M   G+ P    Y
Sbjct: 765 SCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTY 824

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           + +I  F K   L  A    D ML + I P+   +  LI C      + +A     +M E
Sbjct: 825 SSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIE 884

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G+ P   +Y+ +I  L ++  ++  K L  ++       N V +  L D   ++G  D 
Sbjct: 885 FGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDF 944

Query: 564 AIECLEGLSDQ 574
             + L  + ++
Sbjct: 945 CSQLLAAMDNR 955



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 163/388 (42%), Gaps = 39/388 (10%)

Query: 306 VITALSNSGR---TIEAEAVFEELKESGLKPRT---KAYNALLKGYVKMGYLKDAEFVVS 359
           V++ +S SG      EA    + ++  G K      K YN  L+  ++    +    + S
Sbjct: 109 VLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYS 168

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            + + G+LPD  TY+ +I AY   G    A      +  S  + +++  + +L GY    
Sbjct: 169 HLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTS 228

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + ++   +L  M   G   + + Y ++I    +  C+  A+     M+ +G   +  T+ 
Sbjct: 229 DLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYT 288

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    K GR   A  L +EM  RG  P   TYN MI+   +  R +D   +   M   
Sbjct: 289 LLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQN 348

Query: 540 GLLPNVVTYTTLVDIYG-QSGRFDDAIECLEGL---------------------SDQAVN 577
           G  P+  TY +L  IYG   G+ D+A E L G                      +++  +
Sbjct: 349 GCNPDDWTYNSL--IYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDD 406

Query: 578 AFRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A RV   M +   K    A   LIN   +  R  EA   L  M  NGL P+VVTYT++  
Sbjct: 407 ALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSI-- 464

Query: 635 ALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
               +D + KV        ++K++ + G
Sbjct: 465 ----IDGYCKVGMVGAALEVFKLMEHEG 488



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/305 (20%), Positives = 123/305 (40%), Gaps = 21/305 (6%)

Query: 166 YSILIHAL---GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  +   G+ +     F  ++S   + +  TY   IS+  +   +E+A +L+ +M 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEME 727

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECD----------KIELDGQLL 268
           +DG   D + Y++ I        ID   S L+++  +  C+          K  L   L+
Sbjct: 728 RDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV-DASCEPNCWTYWLLLKHFLKMSLI 786

Query: 269 NDVIV---GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           N   V   G     + +   + L      GL+P   TY+++I     + R  EA  + + 
Sbjct: 787 NAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH 846

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +    + P  + Y  L+K    +     A   V++M   G  P   +Y  LI    + G 
Sbjct: 847 MLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGD 906

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
           ++ A+ +  ++       N   +  +  G    G      Q+L  M +     D+  Y++
Sbjct: 907 YDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSM 966

Query: 446 MIDTF 450
           + D+ 
Sbjct: 967 LTDSI 971



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 25/274 (9%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++ I +   +GR E+        +R  +TP  +TYN  I+ C     +++A + + +M 
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQK--LYKEIECDKIELDGQLL---------- 268
                 +   Y L+++   + + I++  +    ++  IE   + +  QLL          
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIE---LNMVWQLLERMMKHGLNP 819

Query: 269 -----NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
                + +I GF KA    +A   L    G  +SP    Y  +I    +     +A +  
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFV 879

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
            ++ E G +P+ ++Y+ L+ G    G    A+ +  ++       +E  + +L D    A
Sbjct: 880 TDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKA 939

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           G  +    +L  M+  H + +S  YS +    R+
Sbjct: 940 GHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIRE 973


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 221/500 (44%), Gaps = 38/500 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  ++   TP   TY  LI +  +   +E+A  L  +MR
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G     + Y+ +I +  +  ++  +  +  ++  +  C   ++    L D   G  KA
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV-DAGCRPNDVTYGALVD---GLCKA 406

Query: 279 GDASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAV 322
           G+ SKA        G                  L+P   TY A++  L  + +   A  +
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +  SG +P    Y+AL+ G+ K G +  A+ V  +M + G LP  HTY+ LID    
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 526

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            GR + A  VL +M      PN   Y+ ++ G    GE ++  ++L  M+  G  P+   
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  +ID  GK   +  ++  F +M  +G  P+ +T+  LI+     G  D+A  L  EM+
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           +  +      Y   I   G  + +     +L  M + G +P    Y  L+D + ++GR +
Sbjct: 647 QTYWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLE 704

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            A+E    L  + +     ++TD     N    SLI A     +  EAF +   M   G 
Sbjct: 705 IAME----LHKEMMEVPSSVKTD-----NDMYASLIQALCLASQVEEAFRLYSEMTRRGF 755

Query: 623 KPDVVTYTTLMKALIRVDKF 642
            P++  +  L+K L+ V K+
Sbjct: 756 VPELSVFVCLIKGLVEVKKW 775



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/544 (21%), Positives = 225/544 (41%), Gaps = 38/544 (6%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P+ + ++ L  + SS   +DL + V   + +   C           HAL +  +  +A  
Sbjct: 38  PSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMD-RFTVGCFAHALCKEGRWADALD 96

Query: 185 LSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
           + +R+  +L  +    +IS        ++A++ + +MR +    + + Y  ++    +  
Sbjct: 97  MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           ++     +++   +  +    +  L N ++  +    D + A + L      G  P    
Sbjct: 157 QL--GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 214

Query: 303 YAAVITALSNSGRTIE------AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           Y   I ++    +         AE ++ E+  +             +    +G    A  
Sbjct: 215 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 274

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++ EM R G +PD  TYS +I    +A + E A ++ +EM++    P+ + Y+ ++  + 
Sbjct: 275 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 334

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G  ++   + +EM+S G  P    Y  +I  + K   +  A   F RM+  G  P+ +
Sbjct: 335 KAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEM-------QERGYFPC---------TTTYNIMINLL 520
           T+  L+D   K G   +A E++ ++           YFPC           TY  +++ L
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            +  + +    LL  M + G  PN + Y  L+D + ++G+ D A E            F 
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE-----------VFL 503

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M   G  PS     SLI+   +D R   A  VL  M ++   P+VVTYT ++  L R+ 
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563

Query: 641 KFHK 644
           +  K
Sbjct: 564 ESEK 567



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 202/493 (40%), Gaps = 29/493 (5%)

Query: 171 HALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           HA G SE   + F      R + +TYNAL+   +    ++    +  +M + G+  D   
Sbjct: 22  HAAGDSEDPLKDF----GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT 77

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
                 +L +  +   +L       IE +  +LD  L   +I G  +A    +AM FL  
Sbjct: 78  VGCFAHALCKEGRWADAL-----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 132

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +     P   TY  +++      +    + +   +   G  P    +N+L+  Y     
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES------ARIVLKEMEVSHA--- 401
              A  +++ M   G  P    Y++ I +     +  S      A  +  EM  ++    
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 252

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           K N   ++R L G    G++ + FQ++KEM   G  PDT  Y+ +I        +  A  
Sbjct: 253 KVNVANFARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            F  M   G+ PD  T+  LID   K G  ++A+ LFEEM+  G  P   TY  +I+   
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC---LEGLSDQAVNA 578
           + ++      +   M   G  PN VTY  LVD   ++G    A E    L G SD A + 
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 579 FRVMRTD--GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           F     D   L P+ +   +L++   +  +   A  +L  M  +G +P+ + Y  L+   
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGF 489

Query: 637 I---RVDKFHKVF 646
               ++D   +VF
Sbjct: 490 CKAGKIDSAQEVF 502



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 200/441 (45%), Gaps = 31/441 (7%)

Query: 128 LWHSLLKNLCSSNSSIDLAY-AVVSWLQK-HNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++H ++   C  N   D+ Y A+V  L K  N+  ++E+   ++  +       Y  F  
Sbjct: 380 IFHRMVDAGCRPN---DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--FPC 434

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R  L P  +TY AL+    +   ++ A  L+  M   G   + I Y  +I    +  K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           IDS+  Q+++ ++ +C  +         +I    K G    AM+ L        +P   T
Sbjct: 495 IDSA--QEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I  L   G + +A  +   ++E G  P    Y AL+ G  K G +  +  + ++M 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE-W 421
           R G  P+  TY +LI+    AG  + AR++L EM+ ++       + + L GYR   + +
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY-------WPKYLQGYRCAIQGF 664

Query: 422 QRTF----QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS--EGIEPDT 475
            ++F     +L+EM+S G  P    Y ++ID F K   L  AM     M+     ++ D 
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL-G 534
             + +LI       + + A  L+ EM  RG+ P  + +  +I  L E ++W++  +L  G
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 784

Query: 535 NMRAQGLLPNVVTYTTLVDIY 555
                GLL   ++YTT + ++
Sbjct: 785 ICHEVGLL---LSYTTQIFLF 802



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 43/223 (19%)

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +  C H A  + D +   G  P  +T+N L+      G+ D    + +EM E G+     
Sbjct: 17  RRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 76

Query: 512 TYNIMINLLGEQERWED----VKR----------------------------LLGNMRAQ 539
           T     + L ++ RW D    ++R                             L  MR  
Sbjct: 77  TVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 136

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
             +PNVVTY TL+  + +  +         G   + +N   +M T+G  P+    NSL++
Sbjct: 137 SCIPNVVTYRTLLSGFLKKKQL--------GWCKRIIN---MMMTEGCNPNPSLFNSLVH 185

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           ++  ++  A A+ +L  M   G  P  V Y   + ++   +K 
Sbjct: 186 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 228


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T L ++ L+   +R   ++ +L ++ KM+    +    +Y+ V+     T+K     +  
Sbjct: 136 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 190

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +YKEI+ DK E      + V+ G  +      A+ FL  ++   + P   ++ ++++   
Sbjct: 191 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 246

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A++ F  + + GL P   ++N L+ G   +G + +A  + S+M + GV PD  
Sbjct: 247 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 306

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++L   +   G    A  V+++M      P+   Y+ +L G    G       +LK+M
Sbjct: 307 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 366

Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
            S G E ++    +VM+    K   +  A++ F++M ++G+ PD + ++ +I    K G+
Sbjct: 367 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 426

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D A  L++EM ++   P + T+  ++  L ++    + + LL ++ + G   ++V Y  
Sbjct: 427 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 486

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++D Y +SG       C+E    +A+  F+V+   G+ PS    NSLI  + + Q  AEA
Sbjct: 487 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 535

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKA 635
             +L  +K  GL P VV+YTTLM A
Sbjct: 536 RKILDVIKLYGLAPSVVSYTTLMDA 560



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 200/476 (42%), Gaps = 66/476 (13%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            YS V+  L R  K++ ++L    +  E   I       N ++ G+ K G    A  F  
Sbjct: 202 TYSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 259

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                GL P   ++  +I  L   G   EA  +  ++ + G++P +  YN L KG+  +G
Sbjct: 260 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 319

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-Y 408
            +  A  V+ +M   G+ PD  TY++L+      G  +   ++LK+M     + NS I  
Sbjct: 320 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 379

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           S +L+G    G       +  +MK+ G+ PD   Y+++I    K      A+  +D M  
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 439

Query: 469 EGIEP-----------------------------------DTITWNTLIDCHFKCGRYDR 493
           + I P                                   D + +N +ID + K G  + 
Sbjct: 440 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 499

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ELF+ + E G  P   T+N +I    + +   + +++L  ++  GL P+VV+YTTL+D
Sbjct: 500 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 559

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
            Y   G            + ++++  R  M+ +G+ P+N+  + +        +      
Sbjct: 560 AYANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 607

Query: 613 VLQY------------MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           VL+             M+  G+ PD +TY T+++ L RV      F   +F  I K
Sbjct: 608 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF---VFLEIMK 660



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++  L R +KL +A L    S+ + + P  +++N+++S   +   ++ A +    + 
Sbjct: 203 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 262

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G      +++++I  L     I  +L  +L  ++    +E D    N +  GF   G 
Sbjct: 263 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 320

Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
            S A   +      GLSP   TY                                    +
Sbjct: 321 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 380

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +++ L  +GR  EA ++F ++K  GL P   AY+ ++ G  K+G    A ++  EM   
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 440

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            +LP+  T+  L+      G    AR +L  +  S    +  +Y+ ++ GY   G  +  
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 500

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++ K +  +G+ P    +N +I  + K   +  A    D +   G+ P  +++ TL+D 
Sbjct: 501 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 560

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
           +  CG     +EL  EM+  G  P   TY+++   L             +ER +E  K+ 
Sbjct: 561 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 620

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M ++G+ P+ +TY T++    +      A   LE           +M++  L  S+ 
Sbjct: 621 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 669

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LI++        +A + +  ++E  +      YTTL+KA
Sbjct: 670 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 712



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 51/397 (12%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + ++S   +   +++AL+L ++M+ DG   D + YS+VI  L +  K D +L   LY E+
Sbjct: 380 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 437

Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
            CDK                      +E              LD  L N VI G+AK+G 
Sbjct: 438 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 496

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+    +    G++P  AT+ ++I     +    EA  + + +K  GL P   +Y  
Sbjct: 497 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 556

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
           L+  Y   G  K  + +  EM+  G+ P   TYS++        + E+   VL+E     
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616

Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                  ME     P+   Y+ I+            F  L+ MKS  ++  +  YN++ID
Sbjct: 617 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 676

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +   Y  +  A +    +  + +      + TLI  H   G  + A +LF ++  RG+  
Sbjct: 677 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 736

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
               Y+ +IN L  +    + K     M +QG+ P++
Sbjct: 737 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 773



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 58/396 (14%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-- 188
           +L  LC +   ID A ++ + ++   L  S +L+ YSI+IH L +  K   A  L     
Sbjct: 382 MLSGLCKTGR-IDEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 438

Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +R+ P   T+ AL+    +   L +A +L+  +   G   D + Y++VI    ++  I+
Sbjct: 439 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 498

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +L  +L+K +    I       N +I G+ K  + ++A + L + +  GL+P   +Y  
Sbjct: 499 EAL--ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 556

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE----- 360
           ++ A +N G T   + +  E+K  G+ P    Y+ + KG  +    ++   V+ E     
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616

Query: 361 -------MERSGVLPDEHTYSLLIDAYANAGRWESARIVL-----KEMEVSHA------- 401
                  ME  G+ PD+ TY+ +I           A + L     + ++ S A       
Sbjct: 617 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 676

Query: 402 ---------KPNSFIYS--------------RILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
                    K +SFIYS               ++  +  +G+ +   ++  ++   G   
Sbjct: 677 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 736

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               Y+ +I+   + + ++ +   F  MLS+GI PD
Sbjct: 737 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 60/325 (18%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +++K+  L   T++YN++L  + +   + D   V  E++      +EHTYS ++D   
Sbjct: 159 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLC 211

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              + E A + L+  E     P+   ++ I++GY   G                      
Sbjct: 212 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 249

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                +D          A + F  +L  G+ P   + N LI+     G    A EL  +M
Sbjct: 250 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 296

Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            + G  P + TYNI+    +LLG     WE ++    +M  +GL P+V+TYT L+    Q
Sbjct: 297 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 352

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G  D  +  L+   D     F +   + + P ++ L+ L        R  EA ++   M
Sbjct: 353 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 402

Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
           K +GL PD+V Y+ ++  L ++ KF
Sbjct: 403 KADGLSPDLVAYSIVIHGLCKLGKF 427


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 210/519 (40%), Gaps = 76/519 (14%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TYNAL+    R D L+ A  +  +M + G   D        Q+L +  K   +L   
Sbjct: 240 TRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREAL--- 296

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
               IE +    +  L N +I G  +A    +AM FL   +     P   TY  ++    
Sbjct: 297 --SLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           N  +    + +   +   G  P    +N+L+  Y K      A  ++ +ME+    P   
Sbjct: 355 NKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYV 414

Query: 372 TYSLLIDAYANAG-----------------------------------------RWESAR 390
            Y++LI +  + G                                         ++E A 
Sbjct: 415 VYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY 474

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            V+ EM  +   P++  YS ++    +    +  F + KEMK +GV PD + Y ++ID F
Sbjct: 475 KVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCF 534

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A    D M+ +G EP  +T+ TLI  + K  +   A ELFE M  +G FP  
Sbjct: 535 SKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNV 594

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLL----------------PNVVTYTTLVDI 554
            TY  +I+   +    E   ++   MR    +                PNVVTY  LVD 
Sbjct: 595 ITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++ +  DA + LE            M  DG +P+ +  ++LI+ F +  +  EA  V 
Sbjct: 655 LCKAHKVKDARDLLE-----------TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 615 QYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSSYL 650
             M E G  P+V TY++L+  L    R+D   KV S  L
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 227/500 (45%), Gaps = 34/500 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + ++  AF L +  + T +     TY  LI   ++   +++A N + +M 
Sbjct: 492 YSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMV 551

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG     + Y+ +I +  +  K+  S+  +L++ +       +      +I G+ K+G+
Sbjct: 552 RDGCEPTVVTYTTLIHAYLKAKKV--SVANELFELMIAKGCFPNVITYTALIDGYCKSGN 609

Query: 281 ASKAMRFLGMAQG----------------VGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
             KA +     +G                V   P   TY A++  L  + +  +A  + E
Sbjct: 610 IEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLE 669

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +   G +P T  Y+AL+ G+ K   L +A+ V  +M   G  P+ +TYS LID      
Sbjct: 670 TMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDK 729

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R +    VL +M  +   PN  IY+ ++ G     +    ++++  M+  G +P+   Y 
Sbjct: 730 RLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYT 789

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            MID FGK   +   +  F  M S+G  P+ +T+  LI+     G  D A  L EEM++ 
Sbjct: 790 AMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQT 849

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +    ++Y  +I   G +  +     LL  +   G  P ++ Y  L+D + ++GR + A
Sbjct: 850 YWPKHVSSYCKVIE--GYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVA 907

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E    L  + ++A   M        NL   SLI +F    +   AF +   M  +G+ P
Sbjct: 908 LE----LHKEVISASMSMTAK----KNL-YTSLIYSFSYASKIDHAFELFYDMIRDGVIP 958

Query: 625 DVVTYTTLMKALIRVDKFHK 644
           D+ T+  L+  LIRV ++ +
Sbjct: 959 DLGTFVHLLMGLIRVRRWEE 978



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/438 (23%), Positives = 190/438 (43%), Gaps = 49/438 (11%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           ++  +EI  D  E+ G+LLN +I    + G  + A+  LG  +  G  P   TY A++  
Sbjct: 191 EEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQV 250

Query: 310 LSNSGRTIEAEAVFEELKESGLK--------------------------------PRTKA 337
              + +   A+ V  E+ E GL                                 P T  
Sbjct: 251 FLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTIL 310

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN ++ G  +  + ++A   ++ M  +  +P+  TY +L+    N  +    + +L  M 
Sbjct: 311 YNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL- 456
                P+  I++ ++  Y    ++   +++LK+M+    +P    YN++I +      L 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 457 -----HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
                  A  A++ MLS G   + +   +   C    G++++A ++  EM   G+ P T+
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTS 490

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY+ +I  L    R E+   L   M+  G++P+V TYT L+D + ++           G+
Sbjct: 491 TYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA-----------GI 539

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             QA N    M  DG +P+ +   +LI+A+ + ++ + A  + + M   G  P+V+TYT 
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 632 LMKALIRVDKFHKVFSSY 649
           L+    +     K    Y
Sbjct: 600 LIDGYCKSGNIEKACQIY 617



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 209/509 (41%), Gaps = 78/509 (15%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           ++ ++ FL   S  E+A  L           FK  +    VP    +++L +  S    I
Sbjct: 492 YSEVIGFLCNASRVENAFFL-----------FKEMKGTGVVPDVYTYTILIDCFSKAGII 540

Query: 144 DLAYAVVSWLQK--HNLCYSYELLYSILIHALGRSEKLY---EAFLLSQRQRLTP--LTY 196
             A+   +WL +   + C    + Y+ LIHA  +++K+    E F L   +   P  +TY
Sbjct: 541 KQAH---NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDF----------------INYSLVIQSLTR 240
            ALI    ++ ++EKA  + ++MR D    D                 + Y  ++  L +
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
            +K+  +  + L + +  D  E +  + + +I GF KA    +A          G +P  
Sbjct: 658 AHKVKDA--RDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV 715

Query: 301 ATYAAVIT-----------------------------------ALSNSGRTIEAEAVFEE 325
            TY+++I                                     LS   +T EA  +   
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++E G KP    Y A++ G+ K G +     +  EM   G  P+  TY++LI+     G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  +L+EM+ ++   +   Y +++ GY+   E+  +  +L+E++ +G  P    Y V
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKV 893

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +ID F K   L  A+     ++S  +        + +LI       + D A ELF +M  
Sbjct: 894 LIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIR 953

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRL 532
            G  P   T+  ++  L    RWE+  +L
Sbjct: 954 DGVIPDLGTFVHLLMGLIRVRRWEEALQL 982



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/377 (19%), Positives = 134/377 (35%), Gaps = 33/377 (8%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL   + +G     A Y A++            E    E++    +   K  N L++   
Sbjct: 158 FLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G    A   +  ++  G  P   TY+ L+  +  A + ++A++V +EM       + F
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                       G+W+    ++++       P+T  YN MI    + +    AM   +RM
Sbjct: 278 TLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
            S    P+  T+  L+       +  R + +   M   G +P  T +N +++   + + +
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------------- 565
               +LL  M      P  V Y  L+      G     +                     
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 566 -------ECLEGLS--DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                   CL G    ++A      M  +G  P     + +I       R   AF + + 
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 617 MKENGLKPDVVTYTTLM 633
           MK  G+ PDV TYT L+
Sbjct: 515 MKGTGVVPDVYTYTILI 531


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 223/486 (45%), Gaps = 57/486 (11%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP----LTYNALISACARNDDLEKALNLMSKM 219
            +YS LI A GRS KL +A  + +  ++      + YNA+I AC++  D   AL +  +M
Sbjct: 156 FVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREM 215

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G   D I ++ +I +  R N+ +           ECD+I             FA+  
Sbjct: 216 LEQGMSPDRITFNTLISAAGRANRWE-----------ECDRI-------------FAEME 251

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAY 338
           +              G++    TY  +I      G+     A+ E + K SG++P    Y
Sbjct: 252 ER-------------GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITY 298

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + ++ GY K+G   +A  +  EM    V PD   Y+ ++D +A  G ++ A  + + ME 
Sbjct: 299 STMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEE 358

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +    +   Y+ +L  Y  +G+++    +L+EMK  G  P+   Y+ +ID + K+     
Sbjct: 359 AGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRD 418

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AMA F  +   G++PD + ++TL+D   K G  D A  L EEM + G  P   TYN +++
Sbjct: 419 AMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLD 478

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV-- 576
             G Q     V++    +R   LLP V   T L+    Q    DD    ++    QA+  
Sbjct: 479 AYGRQCLM--VRKTFPKLRFF-LLPRV---TMLLKPSMQ----DDQQSLVDPKQKQALVL 528

Query: 577 ---NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                FR M  +G+KP+ +  +S++NA        +A  +L+ M+    +   VT+  LM
Sbjct: 529 AAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLM 588

Query: 634 KALIRV 639
              IRV
Sbjct: 589 GFRIRV 594



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 13/275 (4%)

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S +I +    GR + A+++      +    N F+YS ++  Y   G+  +  ++ + MK 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
              +P+   YN +ID   K      A+  F  ML +G+ PD IT+NTLI    +  R++ 
Sbjct: 184 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLV 552
            + +F EM+ERG      TYN +I       +      L+  M ++ G+ P+V+TY+T++
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D Y + G           L+ +A+  F+ MR   ++P  +  N++++         EA +
Sbjct: 303 DGYAKLG-----------LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHS 351

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           + + M+E G   D+VTY  L+ +  +  KF +  S
Sbjct: 352 IRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 386



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 110/237 (46%), Gaps = 21/237 (8%)

Query: 419 GEWQRT-----FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+W++      + VL++   S  +  T   + +I + G+      A   FDR +  G   
Sbjct: 97  GQWEKVVKSFDWMVLQQNLRSQWDKVT---STIISSLGRLGRSDWAQLIFDRAVGAGFGN 153

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           +   +++LI  + + G+  +A E+FE M+     P    YN +I+   +   +    R+ 
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK-PNLVVYNAVIDACSKGGDYPTALRIF 212

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
             M  QG+ P+ +T+ TL+   G++ R++   EC           F  M   G+   ++ 
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWE---EC--------DRIFAEMEERGIARDDVT 261

Query: 594 LNSLINAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            N+LI  +    +     A+++ M K +G++P V+TY+T++    ++   H+  + +
Sbjct: 262 YNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 318


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 217/476 (45%), Gaps = 19/476 (3%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +Y+ L+    ++ ++ +A LL +  R T +     T+N L+    +   +E +  L+  +
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G   D   Y +++ SL    ++D ++  KL +E+    + L     N +I  +++AG
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAM--KLLQELLEKGLTLSVVAFNSLIGAYSRAG 471

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              KA     +    G +P ++T  +++  L   G   EA  +   + E G      AY 
Sbjct: 472 LEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYT 531

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL GY KM  L+ A+F+  EM+  G+ PD   ++ LID  + AG  E A  V  EM   
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN+F Y+ ++ G  D G      ++ KEM+  G+  DT  +N++ID F +   +  A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +  F  M   G+ PD  T+N LI  + K      A E+  +M   G  P  TTYN  ++ 
Sbjct: 652 IETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHG 711

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
                +      +L  + + G++P+ VTY T++     SG   D +       D+A+   
Sbjct: 712 YCRMRKMNQAVIILDQLISAGIVPDTVTYNTML-----SGICSDIL-------DRAMILT 759

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             +   G  P+ +  N L++ F +     +A    Q ++E     D ++Y  L +A
Sbjct: 760 AKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQA 815



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 200/451 (44%), Gaps = 13/451 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N LI+AC        A++ +  M + G       ++ ++ +L R   +  +  +KL+
Sbjct: 283 VTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEA--RKLF 340

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             I+   I  +  + N ++ G+ KA + ++A       +  G+SP   T+  ++      
Sbjct: 341 DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +++ + ++L  SGL   +  Y+ ++      G L +A  ++ E+   G+      +
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI AY+ AG  + A    + M      P+S   + +L G   +G  Q    +L  M  
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G   +   Y V++D + K N L  A   +  M   GI PD + +  LID   K G  + 
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE 580

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A E+F EM   G+ P    YN +I  L +  R  +  +L   MR +GLL +  T+  ++D
Sbjct: 581 AYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIID 640

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            + + G+   AIE            F  M+  GL P     N LI  + +      A  +
Sbjct: 641 GFCRRGQMKFAIE-----------TFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEI 689

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +  M   GL PD+ TY T M    R+ K ++
Sbjct: 690 VNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 195/416 (46%), Gaps = 21/416 (5%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQK--LYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           D +++ +      RTNKI   + +   +Y        E D  +LN ++ GF   G   +A
Sbjct: 145 DVVSWLIARVGTGRTNKIVDFMWRNHAMY--------ESDFSVLNTLLRGFLNVGMGFEA 196

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           +  L M +GVG+ P  ++   ++  L   G       +F+++   G +P    +NA++ G
Sbjct: 197 LEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICG 256

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + +   +   E ++  M +    PD  T+++LI+A    GR   A   L  M  S  +P+
Sbjct: 257 FCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPS 316

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              ++ IL      G      ++   ++  G+ P+   YN ++D + K   +  A   ++
Sbjct: 317 VATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYE 376

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M + G+ PD +T+N L+  H+K GR + ++ L +++   G F  ++ Y++M++ L    
Sbjct: 377 EMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAG 436

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R ++  +LL  +  +GL  +VV + +L+  Y ++           GL D+A  A+R+M  
Sbjct: 437 RLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRA-----------GLEDKAFEAYRIMVR 485

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            G  PS+   NSL+          EA  +L  M E G   + V YT L+    +++
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMN 541



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 17/424 (4%)

Query: 229 INYSLVIQSLTRTNKI--DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           + ++ +I    R +++    SLL  + K +    +     L+N   +G    G    A+ 
Sbjct: 248 LTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG----GRTWVAID 303

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           +L +    G+ P  AT+  ++ AL   G  +EA  +F+ +++ G+ P    YN L+ GY 
Sbjct: 304 WLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYF 363

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K   +  A  +  EM  +GV PD  T+++L+  +   GR E +  +LK++ VS    +S 
Sbjct: 364 KAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSS 423

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +Y  +++     G      ++L+E+   G+      +N +I  + +      A  A+  M
Sbjct: 424 LYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM 483

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +  G  P + T N+L+    + G    A  L   M E+G+      Y ++++   +    
Sbjct: 484 VRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNL 543

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E  + L   M+ +G+ P+ V +T L+D   ++G  ++A E            F  M   G
Sbjct: 544 EGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYE-----------VFLEMSAIG 592

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             P+N A NSLI    +  R  EA  + + M++ GL  D  T+  ++    R  +     
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAI 652

Query: 647 SSYL 650
            ++L
Sbjct: 653 ETFL 656


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 202/449 (44%), Gaps = 23/449 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKL 252
           T   +I++    + ++ A + ++K+ + G+  D   ++ +I+ L    KI  +L    K+
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALS 311
             E     +   G L+N    G  K G+ S A+R L  M QG    P    ++ +I +L 
Sbjct: 167 IGEGFQPNVVTYGTLIN----GLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTLIDSLC 221

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              +  EA  +F E+   G+ P    YN+L+ G  K+   K    +++EM  S ++PD  
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 281

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T + ++DA    G    A  V+  M     +PN   Y+ ++ G+  R E     +V   M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCG 489
                  +   YN +I+ + K   +  AM  F+ M  + + P+T+T+NTLI   CH   G
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV--G 399

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A  LF EM  RG  P   TY  + + L +    +    LL  +      P++  YT
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 459

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           T++D   ++G  +DA +    LS +           GL+P+    N +I+   +    AE
Sbjct: 460 TILDGMCRAGELEDARDLFSNLSSK-----------GLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  +   M +NG  P+  TY  + +  +R
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLR 537



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 193/444 (43%), Gaps = 13/444 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++N   S     + L++AL+  ++M         ++++ ++ S+ +T K  S+LL  L +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKT-KHHSTLLS-LSR 94

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++   I  D   L  VI           A   L     +G  P   T+  +I  L   G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +F+++   G +P    Y  L+ G  K+G    A  ++  ME+    P+   +S
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID+     +   A  +  EM      PN   Y+ ++ G     EW+    ++ EM  S
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + PD    N ++D   K   +  A    D M+  G+EP+ +T+N L+D H      D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ++F+ M  +       +YN +IN   + +  +    L   M  Q L PN VTY TL+  
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
               GR  DAI           + F  M   G  P  +   +L +   +++   +A A+L
Sbjct: 395 LCHVGRLQDAI-----------SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
           + ++ +   PD+  YTT++  + R
Sbjct: 444 KAIEGSNWDPDIQIYTTILDGMCR 467



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 190/456 (41%), Gaps = 14/456 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE-LLYSILIHALGRSEKLYEAFLLSQR-- 188
           ++ +LC  N  +D A++ ++ + K  L +  +   ++ LI  L    K+ EA  L  +  
Sbjct: 111 VINSLCHLNR-VDFAFSALAKILK--LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +   P  +TY  LI+   +  +   A+ L+  M Q     + + +S +I SL +  ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +    ++ E+    I  +    N +I G  K  +       +       + P   T   
Sbjct: 228 EAF--NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           V+ AL   G   EA  V + +   G++P    YNAL+ G+     +  A  V   M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            + +  +Y+ LI+ Y      + A  + +EM      PN+  Y+ ++ G    G  Q   
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +  EM + G  PD   Y  + D   K   L  AMA    +     +PD   + T++D  
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G  + A +LF  +  +G  P   TYNIMI+ L +Q    +  +L   M   G  PN 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            TY  +   +    R ++A+  +E L +     F V
Sbjct: 526 CTYNLITRGF---LRNNEALRTIELLEEMLARGFSV 558



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 156/375 (41%), Gaps = 37/375 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + ++ LI +  ++  + +A N+ S+M   G   + + Y+ +I  L +    +   +  L 
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL--CEWKHVTTLM 268

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI------ 307
            E+   KI  D   LN V+    K G  ++A   + M    G+ P   TY A++      
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 308 -------------------------TALSNSGRTIE----AEAVFEELKESGLKPRTKAY 338
                                      L N    I+    A  +FEE+    L P T  Y
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G   +G L+DA  +  EM   G +PD  TY  L D        + A  +LK +E 
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S+  P+  IY+ IL G    GE +    +   + S G++P+   YN+MI    K   L  
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M   G  P+  T+N +     +     R  EL EEM  RG+    +T  +++ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 519 LLGEQERWEDVKRLL 533
           +L +    + VK++L
Sbjct: 569 MLSDDGLDQSVKQIL 583



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 152/352 (43%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++T+++ +       ++  ++   G+ P       ++     +  +  A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G  PD  T++ LI      G+   A  +  +M     +PN   Y  ++ G   
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      ++L+ M+    +P+   ++ +ID+  K   +  A   F  M+++GI P+ +T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N+LI    K   +     L  EM +    P   T N +++ L ++    +   ++  M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ PNVVTY  L+D +           CL    D AV  F  M       + ++ N+L
Sbjct: 308 HRGVEPNVVTYNALMDGH-----------CLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + + Q   +A  + + M    L P+ VTY TL+  L  V +     S +
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 11/197 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A++ F+RML +   P T+ +N L+    K   +     L  +M   G  P   T
Sbjct: 48  FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 107

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             I+IN L    R +     L  +   G  P+  T+TTL  I G          C+EG  
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTL--IRGL---------CVEGKI 156

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F  M  +G +P+ +   +LIN   +    + A  +L+ M++   +P+VV ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 633 MKALIRVDKFHKVFSSY 649
           + +L +  +  + F+ +
Sbjct: 217 IDSLCKDRQVTEAFNIF 233


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 202/421 (47%), Gaps = 28/421 (6%)

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
           HC F  Y L+I+SL +    D  L++ +   +  D   +D ++L  ++  FA+AG    A
Sbjct: 91  HC-FSTYELLIRSLCQMGLHD--LVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLA 147

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
            + +   QG      +  Y  ++  L   G+  EA  +F+E       P T  +N L++G
Sbjct: 148 KKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRG 207

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH-AKP 403
             ++G ++    + + M+  G LPD  TY+ LI     A   + A  +LKE++  +   P
Sbjct: 208 LCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSP 267

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ I++G+R  G+ +    + +EM  SG+EP    +NV+ID FGK   +  A A  
Sbjct: 268 DVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMH 327

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           ++M S    PD +T+ +LID + + G      ++++ M+ R   P   TY+++IN L + 
Sbjct: 328 EKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKD 387

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------------------- 564
            R  + + LL  ++   + P    Y  ++D + ++G  D+A                   
Sbjct: 388 NRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTF 447

Query: 565 -----IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C++G   +A++ F+ M   G  P N+ ++SL+    +  + +EAF ++Q   E
Sbjct: 448 TILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507

Query: 620 N 620
           +
Sbjct: 508 D 508



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 152/362 (41%), Gaps = 41/362 (11%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSK 218
            +Y+ L++ L +  K++EA  L +            T+N LI    R  ++EK   L + 
Sbjct: 164 FVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNA 223

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   D + Y+ +I  L + N++D +    L KE+         Q  ND        
Sbjct: 224 MQSFGCLPDVVTYNTLISGLCKANELDRAC--DLLKEV---------QSRNDC------- 265

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
                             SP   TY ++I+     G+   A  +FEE+  SG++P    +
Sbjct: 266 ------------------SPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTF 307

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G+ K+G +  AE +  +M     +PD  T++ LID Y   G       V   M+ 
Sbjct: 308 NVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKA 367

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
            +  PN + YS I+              +L+++K S V P    YN +ID F K   +  
Sbjct: 368 RNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDE 427

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A      M  +   PD +T+  LI  H   GR   A ++F++M   G  P   T + ++ 
Sbjct: 428 ANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVA 487

Query: 519 LL 520
            L
Sbjct: 488 CL 489



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 155/358 (43%), Gaps = 25/358 (6%)

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           +TY  +I +L   G     E V   ++  G    ++    L+  + + G    A+ ++ E
Sbjct: 94  STYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE 153

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ++          Y+ L++     G+   A  + KE    H+ PN++ ++ ++ G    GE
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWN 479
            ++ F++   M+S G  PD   YN +I    K N L  A      + S     PD +T+ 
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           ++I    K G+ + A  LFEEM   G  P   T+N++I+  G+       + +   M + 
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQA 575
             +P+VVT+T+L+D Y ++G     ++                        C +    +A
Sbjct: 334 SCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEA 393

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            +  R ++   + P     N +I+ F +     EA  ++  M+E   +PD VT+T L+
Sbjct: 394 RDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILI 451



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 12/308 (3%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  L++   +MG     E V+  M   G L D      L+ ++A AG+++ A+ ++ E++
Sbjct: 96  YELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQ 155

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
              A+ +SF+Y+ +L      G+      + KE  +    P+T  +N++I    +   + 
Sbjct: 156 GEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVE 215

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG-YFPCTTTYNIM 516
                F+ M S G  PD +T+NTLI    K    DRA +L +E+Q R    P   TY  +
Sbjct: 216 KGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSI 275

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+   +  + E    L   M   G+ P VVT+  L+D +G+ G    A    E + ++  
Sbjct: 276 ISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAA----EAMHEK-- 329

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                M +    P  +   SLI+ +           V   MK   + P++ TY+ ++ AL
Sbjct: 330 -----MASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINAL 384

Query: 637 IRVDKFHK 644
            + ++ H+
Sbjct: 385 CKDNRIHE 392



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 26/161 (16%)

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA---- 564
           C +TY ++I  L +    + V+ ++G MR+ G L +      LV  + Q+G+FD A    
Sbjct: 92  CFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLI 151

Query: 565 IECLEG------------LSDQAVNAFRVMRTDGLKPSNLALNS---------LINAFGE 603
           IE ++G            L ++ V   +V     L   NLA +S         LI     
Sbjct: 152 IE-VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCR 210

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                + F +   M+  G  PDVVTY TL+  L + ++  +
Sbjct: 211 VGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDR 251


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 169/395 (42%), Gaps = 24/395 (6%)

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I G    G   + +       G G  P   TY  +I  L   G T  A  +   ++
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           +   +P    Y +++    K   +  A  + SEM   G+ P   TY+ LI A  N   W+
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               +L EM  S   PN  I+S ++      G+      V+  M   GVEP+   YN ++
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D     + +  A+  FD M+ +G  PD ++++TLI+ + K  R ++A  LFEEM  +   
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P T TY+ +++ L    R +D   L   M  +G +P+ V+Y  L+D   ++ R D+AI  
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 440

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C  G  + A + F  + + GL P+      +IN   +
Sbjct: 441 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 500

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               AEA  +   MK  G  P+  TY  + +  +R
Sbjct: 501 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 156/357 (43%), Gaps = 26/357 (7%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A + F  +      P    +  LL    KM +      +  +M+  G+ P+ +T ++LI
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 378 DAYANAGRWESARIVL-KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +++ +  R   A  VL K +++ H +PN   ++ ++ G    G+      +  +M   G 
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGH-QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 169

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+   Y  +I+   K      A+     M     +PD + + ++ID   K  +  +A  
Sbjct: 170 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 229

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF EM  +G  P   TYN +I+ L     W+ V  LL  M    ++PNVV ++T+VD   
Sbjct: 230 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 289

Query: 557 QSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNL 592
           + G+  +A +                        CL    D+AV  F  M   G  P  +
Sbjct: 290 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 349

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + ++LIN + + QR  +A  + + M    L P+ VTY+TLM  L  V +     + +
Sbjct: 350 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 192/412 (46%), Gaps = 13/412 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +L+  LC   S+   A  ++  +++ N C    ++Y+ +I +L +  ++ +AF L S+
Sbjct: 176 YGTLINGLCKVGST-SAAIRLLRSMEQGN-CQPDVVVYTSIIDSLCKDRQVTQAFNLFSE 233

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              Q ++P   TYN+LI A     + +    L+++M       + + +S V+ +L +  K
Sbjct: 234 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 293

Query: 244 IDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +  +  ++  + K      +E +    N ++ G     +  +A++        G +P   
Sbjct: 294 VMEAHDVVDMMIKR----GVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 349

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y+ +I       R  +A  +FEE+    L P T  Y+ L+ G   +G L+DA  +  EM
Sbjct: 350 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 409

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G +PD  +Y +L+D      R + A  +LK +E S+  P+  IY+ ++ G    GE 
Sbjct: 410 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    +   + S G+ P+   Y +MI+   +   L  A   F  M  +G  P+  T+N +
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
                +     R  +L +EM  RG+    +T  +++ +L +    + VK++L
Sbjct: 530 TRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 7/235 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS LI+   + +++ +A  L +   R+ L P  +TY+ L+        L+ A+ L  +M 
Sbjct: 351 YSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV 410

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   DF++Y +++  L +  ++D ++   L K IE   ++ D Q+   VI G  +AG+
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAI--ALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A          GL P   TY  +I  L   G   EA  +F E+K  G  P    YN 
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + +G+++         ++ EM   G   D  T ++L++  ++ G  +S + +L E
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 201/452 (44%), Gaps = 17/452 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    +Y  LI        + +AL L+  M QDG   +   Y+L+I+ L +  +I  +  
Sbjct: 246 RRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDA-- 303

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           + L  E+    +       N +I G+ K+G    A+    + +  G +P   TY ++I  
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYG 363

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+  EAE +       G  P    +  L+ GY K   + DA  V S M  S    D
Sbjct: 364 LCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y +LI+      R + A+  L EM  +   PN  IY+ I+ GY   G      +V K
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFK 482

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M+  G  P+   Y  +I    +   LH AMA   +M  +GI P  I + TLI    K  
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            +D A  LFE M++ G  P    YN++ + L +  R E+    L     +G++   VTYT
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYT 599

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           +LVD + ++G  D A   +E            M  +G K      + L+ A  + ++  E
Sbjct: 600 SLVDGFSKAGNTDFAAVLIEK-----------MVNEGCKADLYTYSVLLQALCKQKKLNE 648

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A ++L  M  +G+K ++V YT ++  +I+  K
Sbjct: 649 ALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 172/388 (44%), Gaps = 49/388 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P T TY  +I A    G    A   F  L+ESG++  T   NALL GY +   L+ A
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
            +++  M   G   +E++Y++LI     A     A +++  M       N  +Y+ ++ G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKG 293

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G       +L EM   GV P    YN MID + K   +  A+     M   G  PD
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353

Query: 475 TITWNTLIDCHFKC-GRYDRAEELFEEMQERGYFPCTTT--------------------- 512
             T+N+LI  +  C G+ D AEEL      RG+ P   T                     
Sbjct: 354 DWTYNSLI--YGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVK 411

Query: 513 --------------YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
                         Y ++IN+L ++ R ++ K  L  M A GL PNVV YT+++D Y   
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY--- 468

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C  G+   A+  F++M  +G  P+     SLI    +D++  +A A++  M+
Sbjct: 469 --------CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQ 520

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E+G+ P V+ YTTL++   +  +F   F
Sbjct: 521 EDGITPGVIAYTTLIQGQCKKHEFDNAF 548



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 216/489 (44%), Gaps = 22/489 (4%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKM 219
           +Y++LI  L +  ++++A  L     L  +     TYNA+I    ++  ++ AL + + M
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            Q+G + D   Y+ +I  L    K+D +  ++L                 ++I G+ KA 
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEA--EELLNGAIARGFTPTVITFTNLINGYCKAE 402

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
               A+R                Y  +I  L    R  EA+    E+  +GL P    Y 
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
           +++ GY K+G +  A  V   ME  G  P+  TY  LI       +   A  ++ +M+  
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ ++ G   + E+   F++ + M+ +G+ PD   YNV+ D   K      A
Sbjct: 523 GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG---RA 579

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             A+  ++ +G+    +T+ +L+D   K G  D A  L E+M   G      TY++++  
Sbjct: 580 EEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQA 639

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +Q++  +   +L  M   G+  N+V YT ++          + I+  EG  D A + F
Sbjct: 640 LCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS---------EMIK--EGKHDHAKSLF 688

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M + G KPS       I+++ +  +  EA  ++  M+ +G+ PDVVTY   +     +
Sbjct: 689 NEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHM 748

Query: 640 DKFHKVFSS 648
               + FS+
Sbjct: 749 GYMDRAFST 757



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/563 (23%), Positives = 234/563 (41%), Gaps = 65/563 (11%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--------LLSQRQRLTPLTYNAL 199
           A++  L +     +Y+ L   +I   G +E + EA         +  +R  L+P  YN  
Sbjct: 91  ALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLA 150

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           + +  R D  E    L S + Q+G   D + Y+ +I +  +   +  ++  + +  +   
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSL--AIAHRYFCLLRES 208

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +++D    N +++G+ +  D  KA   L M   +G      +Y  +I  L  +    EA
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREA 268

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +   + + G       Y  L+KG  K G + DA  ++ EM   GV+P   TY+ +ID 
Sbjct: 269 LVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 380 YANAGRWESARIVLKEMEVSHAKP-----NSFIY-------------------------- 408
           Y  +GR + A  +   ME +   P     NS IY                          
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTV 388

Query: 409 ---SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
              + ++ GY          +V   M SS  + D   Y V+I+   K   L  A    + 
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M + G+ P+ + + ++ID + K G    A E+F+ M+  G  P   TY  +I  L + ++
Sbjct: 449 MFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE-----GLS--DQAVN- 577
                 L+  M+  G+ P V+ YTTL+    +   FD+A    E     GL+  +QA N 
Sbjct: 509 LHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNV 568

Query: 578 -------------AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                        A+  +   G+  + +   SL++ F +      A  +++ M   G K 
Sbjct: 569 LTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 625 DVVTYTTLMKALIRVDKFHKVFS 647
           D+ TY+ L++AL +  K ++  S
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALS 651



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 130/566 (22%), Positives = 235/566 (41%), Gaps = 47/566 (8%)

Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GRSE 177
           R V   +W  ++++   C S    D A  + + L + N C   +  Y+ LI+ L  G+ +
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKD-ALGIKA-LMEQNGCNPDDWTYNSLIYGLCGGKLD 370

Query: 178 KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           +  E    +  +  TP  +T+  LI+   + + ++ AL + S M       D   Y ++I
Sbjct: 371 EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLI 430

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
             L +  ++  +  ++   E+  + +  +  +   +I G+ K G    A+    + +  G
Sbjct: 431 NVLIKKCRLKEA--KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P   TY ++I  L    +  +A A+  +++E G+ P   AY  L++G  K     +A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-------------------------- 389
            +   ME++G+ PDE  Y++L DA   +GR E A                          
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 390 ------RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
                  +++++M     K + + YS +L     + +      +L +M  SGV+ +   Y
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            ++I    K     HA + F+ M+S G +P   T+   I  + K G+ + AE L  EM+ 
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
            G  P   TY+I IN  G     +     L  M      PN  TY  L+  + +    + 
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 564 AIECLEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                 G+      +        M   GL P+ +  +S+I  F +  R  EA  +L +M 
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHK 644
              + P+   YT L+K    +  F K
Sbjct: 849 GKAISPNEEIYTMLIKCCCDIKLFGK 874



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 202/463 (43%), Gaps = 59/463 (12%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQ 187
           +L++  C  +   D A+ +   ++K+ L    E  Y++L  AL   GR+E+ Y +FL+ +
Sbjct: 533 TLIQGQCKKHE-FDNAFRLFEMMEKNGLTPD-EQAYNVLTDALCKSGRAEEAY-SFLVRK 589

Query: 188 RQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
              LT +TY +L+   ++  + + A  L+ KM  +G   D   YS+++Q+L +  K++ +
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEA 649

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           L                  +L+ + V                     G+      Y  +I
Sbjct: 650 L-----------------SILDQMTVS--------------------GVKCNIVAYTIII 672

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           + +   G+   A+++F E+  SG KP    Y   +  Y K+G +++AE ++ EMER GV 
Sbjct: 673 SEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVT 732

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY----------SRILAGYRD 417
           PD  TY + I+   + G  + A   LK M  +  +PN + Y          S I A Y D
Sbjct: 733 PDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYID 792

Query: 418 -RGEWQ-----RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
             G W        +Q+L+ M   G+ P    Y+ +I  F K   L  A    D ML + I
Sbjct: 793 TSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAI 852

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P+   +  LI C      + +      +M E G+ P   +Y+ +I  L ++  ++  K 
Sbjct: 853 SPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKS 912

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           L  ++       N V +  L D   ++G  D   + L  + ++
Sbjct: 913 LFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNR 955


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 221/476 (46%), Gaps = 21/476 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIHA   ++ L  A    +    + ++P   TY+ +IS   R  D+E A     +  
Sbjct: 230 YTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRAL 289

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            + +H + + Y+ +I +  +   ++ +  + +   +E   +E    L N ++ G+     
Sbjct: 290 SENWHHNDVIYNNIIHAYCKAGNMERA--EAIMTAMEEQGLEATLGLYNMLMDGYVHCRA 347

Query: 281 ASKAM---RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             K +   R L      GLSP   +Y  +I   S  G+  +A  +  E+++ G+K   K 
Sbjct: 348 VDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKT 407

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ ++ GYV++G   +A  V  +M  +G+ PD  TY++L++A+   G+   A  +L  ME
Sbjct: 408 YSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARME 467

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P    Y+ I+ G+   G+ +  F+ +++MK +G  P    YNV++    +   + 
Sbjct: 468 SGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMD 527

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A +  D M+  G+ P+  ++ TLI+ +   G    A + F  ++E G  P    Y  ++
Sbjct: 528 RAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLL 587

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
               +  R +    +   M A G+  N   Y  L+D + Q G   +A + ++        
Sbjct: 588 KACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQK------- 640

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               MR +GL P   +  S INA  +     +A   ++ MK+ G++P++  YTTL+
Sbjct: 641 ----MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLI 692



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/573 (23%), Positives = 254/573 (44%), Gaps = 46/573 (8%)

Query: 79  KQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVP-APLWHSLLKNLC 137
           KQR D T L+N+  +  +  SA           R  F   ES RA    P  HS    + 
Sbjct: 191 KQR-DHTLLVNYYGKRGDKHSA-----------RAAF---ESMRAAGIEPNVHSYTNLIH 235

Query: 138 SSNSSIDL--AYAVVSWLQKHNLCYSYELLYSILIHALGR------SEKLYEAFLLSQRQ 189
           +   + DL  A A V  ++   +  +    YS++I   GR      +E+ ++   LS+  
Sbjct: 236 AYAVAQDLRGAIACVEEMEAEGVSPN-AATYSVIISGYGRLGDVEAAERWFQR-ALSENW 293

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL- 248
               + YN +I A  +  ++E+A  +M+ M + G       Y++++        +D  L 
Sbjct: 294 HHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLN 353

Query: 249 -LQKLYKEIECD---KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
             ++L    E      +   G L+N     ++K G   KA++     +  G+     TY+
Sbjct: 354 VFRRLKARTETGLSPTVVSYGCLINL----YSKLGKMDKALQISNEMEDQGIKHNRKTYS 409

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I      G T  A +VFE++  +G+KP    YN L+  + K G +  A  +++ ME  
Sbjct: 410 MIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESG 469

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              P   TY+++ID +   G    A   +++M+++  +P++  Y+ I+ G    G+  R 
Sbjct: 470 DCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRA 529

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             ++ EM  +GV P+   Y  +I+ +     +  A   F+R+   G++PD I + +L+  
Sbjct: 530 ASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKA 589

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K GR      +  EM   G       YNI+++   ++    +   ++  MR +GL P+
Sbjct: 590 CCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPD 649

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           + +YT+ ++   ++G    A E +E +  Q           G++P+  A  +LI+ +   
Sbjct: 650 IHSYTSFINACCKAGDMLKATETIEQMKQQ-----------GVQPNLQAYTTLIHGWASA 698

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               +A      MK  G+ PD   Y  +M +L+
Sbjct: 699 SYPEKALICYDEMKSAGMIPDKPLYHCIMTSLL 731



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 181/406 (44%), Gaps = 14/406 (3%)

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D    +  ++ +    IE +     ++I  +A A D   A+  +   +  G+SP  ATY+
Sbjct: 207 DKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYS 266

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I+     G    AE  F+             YN ++  Y K G ++ AE +++ ME  
Sbjct: 267 VIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQ 326

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV---SHAKPNSFIYSRILAGYRDRGEW 421
           G+      Y++L+D Y +    +    V + ++    +   P    Y  ++  Y   G+ 
Sbjct: 327 GLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKM 386

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
            +  Q+  EM+  G++ +   Y+++ID + +     +A + F+ M + GI+PD IT+N L
Sbjct: 387 DKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNIL 446

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           ++   K G+ +RA EL   M+     P   TY I+I+   +          + +M+  G 
Sbjct: 447 MNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGF 506

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            P+  TY  ++    Q+G+ D A   +    D+ V A       G+ P+  +  +LI  +
Sbjct: 507 RPSAATYNVIMHGLAQAGQMDRAASII----DEMVVA-------GVHPNERSYTTLIEGY 555

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
                   AF     +KE GLKPDV+ Y +L+KA  +  +     +
Sbjct: 556 ACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLA 601



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 28/324 (8%)

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           KDA  VV   +R    P +  ++LL++ Y   G   SAR   + M  +  +PN   Y+ +
Sbjct: 175 KDARKVVDAFKRIKK-PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNL 233

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           +  Y    + +     ++EM++ GV P+   Y+V+I  +G+   +  A   F R LSE  
Sbjct: 234 IHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENW 293

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN---LLGEQERWED 528
             + + +N +I  + K G  +RAE +   M+E+G       YN++++        ++  +
Sbjct: 294 HHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLN 353

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV------------ 576
           V R L      GL P VV+Y  L+++Y + G+ D A++    + DQ +            
Sbjct: 354 VFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIID 413

Query: 577 ---------NAFRV---MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                    NAF V   M   G+KP  +  N L+NAF ++ +   A  +L  M+     P
Sbjct: 414 GYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPP 473

Query: 625 DVVTYTTLMKALIRVDKFHKVFSS 648
            + TYT ++   +++      F +
Sbjct: 474 TLRTYTIIIDGFMKIGDLRMAFET 497


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 254/610 (41%), Gaps = 72/610 (11%)

Query: 101 SALASSPSSLNRVEFKLAESYRAV---PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           SALA SPS+  +    +  S  A+   P     +LL +   S  ++  A + +S +Q   
Sbjct: 181 SALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFG 240

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKA 212
           L     + Y+ L+ A  R   L EA  L  R +      T  TYN L+SA AR   +++A
Sbjct: 241 LSPDV-VTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQA 299

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE--------------- 257
            N++  M   G+  D   Y+++   L +  K+D +   KL  E+E               
Sbjct: 300 TNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF--KLKDEMEHLSIVSPDVVTYNTL 357

Query: 258 ---CDKIELDGQLLN------------------DVIVGFAKAGDASKAMRFLGMAQGVGL 296
              C K +     LN                   V+ G  + G   +A+  L M    GL
Sbjct: 358 VDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGL 417

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   TY  +I A   +    +A  + +E+  SGLK  T   N LL    K    ++AE 
Sbjct: 418 APDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 477

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           ++    + G +PDE +Y  ++ AY    + E A  +  EM      P+ + Y+ ++ G  
Sbjct: 478 LLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLC 537

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G+       L E+   G+ PD   YN++I  + K   L  A    ++ML    +PD +
Sbjct: 538 TIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVV 597

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T NTL++     G+ ++A +LFE   E+G      TYN +I  L +    +       +M
Sbjct: 598 TCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADM 657

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV-----------MRTD 585
            A+GL P+  TY  ++    ++GR ++A   L  L +    + R            ++T 
Sbjct: 658 EARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTG 717

Query: 586 GLKPSNLALNSLINAFGEDQRD--------------AEAFAVLQYMKENGLKPDVVTYTT 631
                     S  NA G DQ                 EA AVL  M + G+  D  TY T
Sbjct: 718 KDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYIT 777

Query: 632 LMKALIRVDK 641
           LM+ LI+  K
Sbjct: 778 LMEGLIKRQK 787



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 201/444 (45%), Gaps = 28/444 (6%)

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           V+ +L R+          +++ +   ++  +    N ++      G  + A+  L   QG
Sbjct: 179 VLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG 238

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
            GLSP   TY  ++ A    G   EA  +   +K+ G+ P    YN L+  Y ++G++K 
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME-VSHAKPNSFIYSRIL 412
           A  VV  M   G  PD  TY++L      AG+ + A  +  EME +S   P+   Y+ ++
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                         +L+EM+  GV+     +N+++    +   L  A+     M  EG+ 
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD IT+NTLID + K     +A  L +EM   G    T T N ++  L +++R+E+ + L
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEEL 478

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CL 568
           L +   +G +P+ V+Y T++  Y +  + + A+                         C 
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
            G   +A++    +   GL P +   N +I+A+ ++    +AF     M EN  KPDVVT
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598

Query: 629 YTTLMKALI---RVDKFHKVFSSY 649
             TLM  L    +++K  K+F S+
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLFESW 622


>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
 gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
          Length = 506

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 224/509 (44%), Gaps = 23/509 (4%)

Query: 160 YSYELLYSILIHA--LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           Y+Y  + S L  A  L ++ +L+   L S       +TY ALI       +LE+A+ L+ 
Sbjct: 5   YTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVLLLD 64

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
            +           Y L+I+      + +     +L K++  +   L  Q LN  + G  K
Sbjct: 65  AVYFKLSWLVPATY-LIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCK 123

Query: 278 AGDASKAMRFLGMAQG-VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           AG+   A+ F   A+    L    +TY+ ++ AL+ + R  +   +  E++  GL+    
Sbjct: 124 AGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKD 183

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y+ ++    K G +  A+ +V  M     +PD   Y  +I+  +  GR + A  + KE 
Sbjct: 184 TYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEA 243

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +  H   +   Y+ ++ G+      +R  +V   M  +G  PD + YN++ +   ++   
Sbjct: 244 DAKHCT-SVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLW 302

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A     RM  +G+ PD +T+N+LI+   +  RY RA  L +EM  RG  P   TY I+
Sbjct: 303 RFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTIL 362

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  L    R ++   L   +  + L PNV TY T++    ++GR            DQA 
Sbjct: 363 LKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRL-----------DQAH 411

Query: 577 NAFRVM-RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             F VM  +D   P+ +   +LI+          A  +L  M +    PDV  Y T++ A
Sbjct: 412 RLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAA 471

Query: 636 LIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
             +  +  + F       + + + ++G+K
Sbjct: 472 FCKQGRIDEAFE------LLERMPFAGDK 494



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 146/392 (37%), Gaps = 105/392 (26%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK-PNSFIYSRILAGY----------- 415
           P+ +TY+ ++ A   AGR + A  +   M  S +  PN+  Y  ++ G            
Sbjct: 2   PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAVL 61

Query: 416 -------------------------RDRGEWQRTFQVLKEMKSSG--------------- 435
                                     +RG  + T ++LK+M  +G               
Sbjct: 62  LLDAVYFKLSWLVPATYLIIRFKACHERGNLRATIELLKDMAENGSTLSIQDLNGCLRGL 121

Query: 436 -----VEPDTHFYNVMIDTF------GKYNCLHHAMAAFDR----------MLSEGIEPD 474
                V+    F+    ++F        Y+ L  A+ A  R          M S G+E D
Sbjct: 122 CKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEAD 181

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T++ +I    K G  D+A+ L E M  R   P    Y+ +I  L +  R ++   +  
Sbjct: 182 KDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAK 241

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-------------------LEGLSDQA 575
              A+    +VVTY +LV  + ++ R    I+                     EGLS   
Sbjct: 242 EADAKH-CTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHG 300

Query: 576 VNAFRV-----MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           +  F       M  DG+ P  +  NSLIN   ED R   A  ++Q M   G  P+ +TYT
Sbjct: 301 LWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYT 360

Query: 631 TLMKALIR-------VDKFHKVFSSYLFFNIY 655
            L+K L R       V+ F ++    L  N+Y
Sbjct: 361 ILLKWLARNARADECVELFQRLLDRKLAPNVY 392


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 14/386 (3%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYA-AVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           AGD   A+  L      G +    T   A++      G   EA  VF+E+   GL P   
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y AL+ GY   G  +    +  EM R GV P+ +TY+ LI  +   G +E AR +  EM
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            V     N   Y+ ++AG    G+     ++L  M++ G  P    +N+++D +GK   +
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            +A+  F++M + G +P  +T+N LI    +     RA     +M+ERG  P   TY I+
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+    +        +L  M   GL  +  TY  LV              C+EG    A 
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRAL-----------CMEGNMKDAR 303

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F+ M   G++PSN+  + +I  +G +    +A  ++  M++ GL P+  +Y   ++ L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 637 IRVDKFHKVFSSYLFFNIYKMLSYSG 662
            + DK  +  +  L  ++  + S++G
Sbjct: 364 CKDDKCQE--AEALLDDMETIRSFAG 387



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 13/373 (3%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S L  L +  +     LD      ++ G  K GD ++A R       +GL+P   TY A+
Sbjct: 20  SALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTAL 79

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +      G+  +  A+FEE++  G++P    YN L+  + + G  + A  +  EM   G+
Sbjct: 80  MHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGI 139

Query: 367 LPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + +  +Y+ LI      G+ W++A++ L  M     +P+   ++ ++ GY   G+     
Sbjct: 140 VRNVVSYNTLIAGLCRHGKLWDAAKL-LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
               +MK++G +P    YN++I  F +   +  A  A   M   G+EP  +T+  LID  
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +     +A E+   M++ G      TY +++  L  +   +D ++L  +M  +G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           V Y  ++  YG+           EG S +A+     MR  GL P++ +    I    +D 
Sbjct: 319 VIYDMMIYGYGR-----------EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 606 RDAEAFAVLQYMK 618
           +  EA A+L  M+
Sbjct: 368 KCQEAEALLDDME 380



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 9/310 (2%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E+ Y+ L+H     G+ EK +  F   +R  + P   TYN LI    R  + E+A +L  
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +M   G   + ++Y+ +I  L R  K+ D++   KL   +  +         N ++ G+ 
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA---KLLDMMRTEGTRPSIITFNLLVDGYG 189

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KAG  S A+ F    +  G  P   TY  +I     +     A     ++KE GL+P   
Sbjct: 190 KAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKV 249

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+  + +  ++  A  +++ ME++G+  D HTY +L+ A    G  + AR + + M
Sbjct: 250 TYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSM 309

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +P++ IY  ++ GY   G   +  +++ EM+  G+ P++  Y + I    K +  
Sbjct: 310 GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKC 369

Query: 457 HHAMAAFDRM 466
             A A  D M
Sbjct: 370 QEAEALLDDM 379


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 14/416 (3%)

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +MR  G   D   + +V+++  +    D ++  +L+ E+   +IE D ++ +  I    K
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAV--RLFDEMPASEIEPDQRVCSVAIASLCK 224

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             DA++A+  L   Q  G  P   T+ +V+  L   GR  EA  + +EL  +G K     
Sbjct: 225 LRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVL 284

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
              L+ GY     ++ A  +  E  R G++P + TY++LI      G  E A  + ++M 
Sbjct: 285 ATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMR 344

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P++  ++ ++ G  +   W+    + KEM  SG+ PD   YN++I    +   + 
Sbjct: 345 DHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIR 403

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  +++M   G++P  +T+++L+ C+   G  D A +L+ EM  +G+ P   TY  ++
Sbjct: 404 EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLM 463

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
                +  ++    LL  M+  G+  N  TY TL++     GR  +  E L         
Sbjct: 464 KGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEML--------- 514

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
             +   T+G  P+ +  NS+IN F +      AFAV Q M   G+ P++VTYT+ +
Sbjct: 515 --KRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 196/445 (44%), Gaps = 7/445 (1%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
           VP  + +++L   C+     + AY +   ++ H L  S    ++++I  L   +   +A 
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE-FNMVIKGLLNDKLWKDAV 372

Query: 184 LLSQRQRLTPL----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            L +    + +    TYN LI    +   + +ALNL  KM + G     + Y  ++    
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
               +D ++  KLY E+       +      ++ G        KA   L   +  G+S  
Sbjct: 433 VNGCMDEAV--KLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I  L   GR  E   + +  +  G  P    YN+++ G++K G +  A  V  
Sbjct: 491 DYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQ 550

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           +M   G+ P+  TY+  ID Y      + A  +L ++     +P+   Y+ ++ G+   G
Sbjct: 551 QMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEG 610

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 QVL  M   G+ P+   YN  I  +     +  A+  +++M+ EGI+ DT T+ 
Sbjct: 611 NMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYT 670

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID   K G    A +L+ EM  +G  P   T+  + + L      +D ++LL  M   
Sbjct: 671 TLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL 730

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDA 564
            + PNV+ Y  L++ Y ++G+  +A
Sbjct: 731 DIRPNVLMYNMLINGYLRNGKLQEA 755



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 212/504 (42%), Gaps = 34/504 (6%)

Query: 164 LLYSILIHA--LGRS-EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           +L + L+H   L R   K  + F  + R  L P  +TY  LI  C      EKA  L  +
Sbjct: 283 VLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR  G       +++VI+ L        ++   L+KE+    I  D    N +I    + 
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAV--SLFKEMADSGIP-DAFTYNILIHWLCQR 399

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +A+         G+ P   TY +++     +G   EA  ++ E+   G  P    Y
Sbjct: 400 RKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTY 459

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             L+KG++       A  +++EM+++GV  +++TY+ LI+     GR      +LK  E 
Sbjct: 460 TTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFET 519

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P +  Y+ I+ G+   G     F V ++M + G+ P+   Y   ID + K +C   
Sbjct: 520 EGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDL 579

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+   + +  +G+ PD   +N+LI    + G    A ++   M + G  P  + YN  I 
Sbjct: 580 ALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------ 566
                +  E+  RL   M  +G+  +  TYTTL+D + + G    A++            
Sbjct: 640 GYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIP 699

Query: 567 ------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C  G  D A      M    ++P+ L  N LIN +  + +  EAF + 
Sbjct: 700 DHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLH 759

Query: 615 QYMKENGLKPDVVTYTTL--MKAL 636
             M E  + PD  TY  L  MK+L
Sbjct: 760 DEMLERKIMPDDTTYDILVGMKSL 783



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 157/354 (44%), Gaps = 12/354 (3%)

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +G G       +  V+ A    G   +A  +F+E+  S ++P  +  +  +    K+   
Sbjct: 169 RGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDA 228

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             A  V+ +M+ +G +P + T++ ++D     GR E A  +  E+  +  K +  + + +
Sbjct: 229 NRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTL 288

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + GY  + E ++   + +E    G+ P    Y V+I    +      A     +M   G+
Sbjct: 289 MHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGL 348

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            P T  +N +I        +  A  LF+EM + G  P   TYNI+I+ L ++ +  +   
Sbjct: 349 LPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALN 407

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
           L   M   G+ P +VTY +L+  Y           C+ G  D+AV  +  M   G  P+ 
Sbjct: 408 LWEKMNETGVKPYIVTYHSLLLCY-----------CVNGCMDEAVKLYTEMPGKGFTPNV 456

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           +   +L+          +A+A+L  MK+NG+  +  TY TL+  L  V +  +V
Sbjct: 457 VTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEV 510



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 12/353 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++P   +   ++   + S    +A A+  E++  G       ++ +++   K G   DA
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM  S + PD+   S+ I +         A +VL++M+ +   P  F ++ ++  
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G  +    +  E+ ++G +        ++  +     +  A+  F+  L +G+ P 
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T+  LI    + G  ++A EL  +M++ G  P T  +N++I  L   + W+D   L  
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G +P+  TY  L+    Q  +  +A+           N +  M   G+KP  +  
Sbjct: 377 EMADSG-IPDAFTYNILIHWLCQRRKIREAL-----------NLWEKMNETGVKPYIVTY 424

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           +SL+  +  +    EA  +   M   G  P+VVTYTTLMK  I    F K ++
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 209/470 (44%), Gaps = 61/470 (12%)

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            +++S    ++ RT + +  L+    K++E + I  +   LN +I  F +      A   
Sbjct: 78  LVDFSRFFSAIARTKQFN--LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           LG    +G  P T T+  +I  L   G+  EA  + + + E+G +P    YN+++ G  +
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G    A  ++ +ME   V  D  TYS +ID+    G  ++A  + KEME    K +   
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y+ ++ G    G+W     +LK+M S  + P+   +NV++D F K   L  A   +  M+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 468 SEGIEPDTITWNTLIDCHF------------------KCG-----------------RYD 492
           + GI P+ IT+NTL+D +                   KC                  R D
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
              ++F  + +RG      TY+I++    +  + +  + L   M + G+LP+V+TY  L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D    +G+ + A+E                        C  G  + A N F  +   G+K
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           P+ +    +I+   +    +EA  +L+ M+E+G  P+  TY TL++A +R
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 198/442 (44%), Gaps = 14/442 (3%)

Query: 145 LAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
            AY+V+  + K      YE     ++ LI  L    K+ EA +L  R      +   +TY
Sbjct: 131 FAYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTY 186

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N++++   R+ D   AL+L+ KM +     D   YS +I SL R   ID+++   L+KE+
Sbjct: 187 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEM 244

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E   I+      N ++ G  KAG  +     L       + P   T+  ++      G+ 
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 304

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  +++E+   G+ P    YN L+ GY     L +A  ++  M R+   PD  T++ L
Sbjct: 305 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 364

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I  Y    R +    V + +       N+  YS ++ G+   G+ +   ++ +EM S GV
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y +++D       L  A+  F+ +    ++   + + T+I+   K G+ + A  
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF  +  +G  P   TY +MI+ L ++    +   LL  M   G  PN  TY TL+  + 
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544

Query: 557 QSGRFDDAIECLEGLSDQAVNA 578
           + G    + + +E +     +A
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSA 566



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 202/443 (45%), Gaps = 13/443 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+N LI        + +A+ L+ +M ++G   D + Y+ ++  + R+   D+SL   L +
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG--DTSLALDLLR 207

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++E   ++ D    + +I    + G    A+      +  G+     TY +++  L  +G
Sbjct: 208 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 267

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  +   + +++    + P    +N LL  +VK G L++A  +  EM   G+ P+  TY+
Sbjct: 268 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 327

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+D Y    R   A  +L  M  +   P+   ++ ++ GY          +V + +   
Sbjct: 328 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 387

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   Y++++  F +   +  A   F  M+S G+ PD +T+  L+D     G+ ++A
Sbjct: 388 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 447

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+FE++Q+         Y  +I  + +  + ED   L  ++  +G+ PNV+TYT ++  
Sbjct: 448 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-- 505

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
              SG       C +G   +A    R M  DG  P++   N+LI A   D     +  ++
Sbjct: 506 ---SGL------CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556

Query: 615 QYMKENGLKPDVVTYTTLMKALI 637
           + MK  G   D  +   ++  L+
Sbjct: 557 EEMKSCGFSADASSIKMVIDMLL 579



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 182/397 (45%), Gaps = 9/397 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           ++S++  +C S  +  LA  ++  +++ N+  +    YS +I +L R   +  A  L   
Sbjct: 186 YNSIVNGICRSGDT-SLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 243

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             ++  + + +TYN+L+    +         L+  M       + I +++++    +  K
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 303

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +  +   +LYKE+    I  +    N ++ G+      S+A   L +      SP   T+
Sbjct: 304 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            ++I       R  +   VF  + + GL      Y+ L++G+ + G +K AE +  EM  
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            GVLPD  TY +L+D   + G+ E A  + ++++ S       +Y+ I+ G    G+ + 
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            + +   +   GV+P+   Y VMI    K   L  A     +M  +G  P+  T+NTLI 
Sbjct: 482 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            H + G    + +L EEM+  G+    ++  ++I++L
Sbjct: 542 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 163/390 (41%), Gaps = 62/390 (15%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+ L+    ++  ++ A  L  +M   G   D + Y +++  L    K++ +L  +++
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL--EIF 451

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           ++++  K++L   +   +I G  K G    A          G+ P   TY  +I+ L   
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  +  +++E G  P    YN L++ +++ G L  +  ++ EM+  G   D  + 
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571

Query: 374 SLLIDAYANAGRWESARIVLKE--------MEVSHAKP--------------NSFIYSRI 411
            ++ID   +A +  + R  L +        +E+S ++               N+   S  
Sbjct: 572 KMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLN 631

Query: 412 LAGYRDRG----EWQRTFQ------VLKEMKSSGVEP-----------DTHFYNVMIDTF 450
           +     RG    E  R  +      VLK+ K+  V             +    ++M+D  
Sbjct: 632 VNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLE 691

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
              + +H+A  A  RM   G +   +T                AEEL +EM +RG  P T
Sbjct: 692 LPTDAVHYAHRA-GRMRRPGRKMTVVT----------------AEELHKEMIQRGIAPNT 734

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            TY+ +I+   ++ R ++  ++L  M  +G
Sbjct: 735 ITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 175/389 (44%), Gaps = 25/389 (6%)

Query: 269 NDVIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N +I G+ KAGD  +A+  F  + Q     P   ++  ++  L    R  +A AVF+E+ 
Sbjct: 15  NTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEML 74

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
            +GL+      N L+    ++G L+ A  ++  M     + D  TYS L+DA   AGR  
Sbjct: 75  GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAA 134

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  V   M+ +   P++ +Y+ +++    +G+     ++L++M   G+ PD   YN++I
Sbjct: 135 KALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D          A + F  M      PD +T+NTL++   K  R D A +LF+EMQ     
Sbjct: 195 DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 254

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR------- 560
           P  TT+  +I+ L +  R ED       +   G +PN   Y  L+  + +SG+       
Sbjct: 255 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYEL 314

Query: 561 FDDAIEC-----------------LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           F D IEC                   G +  A+   + M  +G  P+    N LI +   
Sbjct: 315 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 374

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
             +  +A+ + + M   G  PD+ TY+ L
Sbjct: 375 AGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 181/373 (48%), Gaps = 5/373 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           + YN LI+   +  D ++AL++  +++Q+G  C  + +++  ++  L + ++   +L   
Sbjct: 12  VAYNTLIAGYCKAGDGDRALDMFRRLKQEG-SCKPNAVSFDTLVIFLCKMSRATDAL--A 68

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +++E+    ++ D  + N +I    + G   +A R L             TY+ ++ AL 
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +GR  +A  VF  ++++G  P T  YN L+    K G + +A  ++ +M R G++PD  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+++ID  ++ GR+E A      M+     P+   Y+ +L G +          +  EM
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +++   PD   +  +IDT  K   +  A+    R++  G  P++  +N LI    + G+ 
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D+  ELF++M E   FP + TY I++     +        LL  M  +G  P + TY  L
Sbjct: 309 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVL 368

Query: 552 VDIYGQSGRFDDA 564
           +     +G+ +DA
Sbjct: 369 IRSLSMAGQVEDA 381



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 7/318 (2%)

Query: 169 LIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           LIH   R   L +A  L          L   TY+ L+ A  +     KAL + S M++ G
Sbjct: 88  LIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAG 147

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              D + Y+++I  L +  K+D +L  +L +++    I  D +  N VI   +  G   K
Sbjct: 148 CMPDTVVYNVLISCLGKQGKVDEAL--ELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEK 205

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A  F GM +    SP   TY  ++  L    RT EA  +F+E++ +   P    +  L+ 
Sbjct: 206 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 265

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
              K G ++DA    + + + G +P+ + Y+ LI  +  +G+ +    + ++M      P
Sbjct: 266 TLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP 325

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +S  Y+ ++ G+  RG      ++L+EM   G  P    YNV+I +      +  A   F
Sbjct: 326 DSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLF 385

Query: 464 DRMLSEGIEPDTITWNTL 481
             M+++G  PD  T++ L
Sbjct: 386 KEMIAKGFNPDMQTYSAL 403



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 12/282 (4%)

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EVSHAKPNSFIYSRILAGYRDRGE 420
           E     PD   Y+ LI  Y  AG  + A  + + + +    KPN+  +  ++        
Sbjct: 3   ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 V +EM  +G++ D +  N +I    +   L  A      M +     D  T++ 
Sbjct: 63  ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSY 122

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+D   K GR  +A E+F  MQ+ G  P T  YN++I+ LG+Q + ++   LL +M  +G
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 182

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           ++P+  TY  ++D+    GR++           +A + F +M+     P  +  N+L+N 
Sbjct: 183 IMPDCRTYNIVIDVLSSCGRYE-----------KAYSFFGMMKRRKHSPDVVTYNTLLNG 231

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             + +R  EA  +   M+ N   PD+ T+ TL+  L +  + 
Sbjct: 232 LKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRM 273



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 14/274 (5%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALI 200
           A  V S +QK   C    ++Y++LI  LG+  K+ EA  L +   R+ + P   TYN +I
Sbjct: 136 ALEVFSNMQKAG-CMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194

Query: 201 ---SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
              S+C R    EKA +    M++  +  D + Y+ ++  L +  + D +    L+ E++
Sbjct: 195 DVLSSCGR---YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC--DLFDEMQ 249

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
            +K   D      +I   AKAG    A+        +G  P +  Y A+I+    SG+  
Sbjct: 250 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVD 309

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +   +F+++ E    P +  Y  L+ G+ + G+   A  ++ EM R G  P   TY++LI
Sbjct: 310 KGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 369

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            + + AG+ E A  + KEM      P+   YS +
Sbjct: 370 RSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 50/266 (18%)

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNC 455
           E     P+   Y+ ++AGY   G+  R   + + +K  G  +P+   ++ ++    K + 
Sbjct: 3   ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
              A+A F  ML  G++ D    NTLI C  + G   +A                     
Sbjct: 63  ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQA--------------------- 101

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
                         +RLL +M A   + +V TY+ L+D  G++GR   A+E         
Sbjct: 102 --------------RRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALE--------- 138

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M+  G  P  +  N LI+  G+  +  EA  +L+ M   G+ PD  TY  ++  
Sbjct: 139 --VFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 196

Query: 636 LIRVDKFHKVFSSYLFFNIYKMLSYS 661
           L    ++ K +S   FF + K   +S
Sbjct: 197 LSSCGRYEKAYS---FFGMMKRRKHS 219


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 218/498 (43%), Gaps = 34/498 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  ++   TP   TY  LI +  +   +E+A  L  +MR
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+ +I +  +  ++  +    ++  +       +      ++ G  KAG+
Sbjct: 286 SVGCSPTVVTYTALIHAYLKAKQVPQA--NDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
            SKA        G                  L+P   TY A++  L  + +   A  + +
Sbjct: 344 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +  SG +P    Y+AL+ G+ K G +  A+ V  +M + G LP  HTY+ LID     G
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL +M      PN   Y+ ++ G    GE ++  ++L  M+  G  P+   Y 
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID  GK   +  ++  F +M  +G  P+ +T+  LI+     G  D+A  L  EM++ 
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +      Y   I   G  + +     +L  M + G +P    Y  L+D + ++GR + A
Sbjct: 584 YWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E    L  + +     ++TD     N    SLI A     +  EAF +   M   G  P
Sbjct: 642 ME----LHKEMMEVPSSVKTD-----NDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 692

Query: 625 DVVTYTTLMKALIRVDKF 642
           ++  +  L+K L+ V K+
Sbjct: 693 ELSVFVCLIKGLVEVKKW 710



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 226/530 (42%), Gaps = 93/530 (17%)

Query: 125 PAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE--LLYSILIHALGRSEKLYE 181
           P P L++SL+ + C+     D AYA    L +   C      ++Y+I I ++   EKL  
Sbjct: 110 PNPSLFNSLVHSYCNEK---DYAYAY-KLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 165

Query: 182 AFLLSQRQRLTPLTYNALISA-CARND--------------DLEKALNLMSKMRQDGYHC 226
             LL   +++    Y  +++A C  N                 +KA  L+ +M + G+  
Sbjct: 166 PDLLDLAEKI----YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 221

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D   YS VI  L    K++ + L  L++E+                              
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFL--LFQEM------------------------------ 249

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                + VG++P   TY  +I +   +G   +A+ +FEE++  G  P    Y AL+  Y+
Sbjct: 250 -----KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 304

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K   +  A  +   M  +G  P++ TY  L+D    AG       + K  EV        
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN------ISKAFEV-------- 350

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y++++ G  D  +    F    E + + + P+   Y  ++D   K + + HA    D M
Sbjct: 351 -YAKLI-GTSDSADSDFYFPC--EDRHT-LAPNVVTYGALVDGLCKAHKVDHAHELLDAM 405

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           LS G EP+ I ++ LID   K G+ D A+E+F +M + GY P   TY  +I+ + +  R 
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRL 465

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           +   ++L  M      PNVVTYT ++D             C  G S++A+    +M   G
Sbjct: 466 DLAMKVLSQMLKDSCTPNVVTYTAMIDGL-----------CRIGESEKALKLLSLMEEKG 514

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             P+ +   +LI+  G+  +   +  +   M   G  P+ VTY  L+  L
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 208/500 (41%), Gaps = 37/500 (7%)

Query: 171 HALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           HAL +  +  +A  + +R+  +L  +    +IS        ++A++ + +MR +    + 
Sbjct: 18  HALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 77

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + Y  ++    +  ++     +++   +  +    +  L N ++  +    D + A + L
Sbjct: 78  VTYRTLLSGFLKKKQL--GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 135

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIE------AEAVFEELKESGLKPRTKAYNALL 342
                 G  P    Y   I ++    +         AE ++ E+  +             
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           +    +G    A  ++ EM R G +PD  TYS +I    +A + E A ++ +EM++    
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+ + Y+ ++  +   G  ++   + +EM+S G  P    Y  +I  + K   +  A   
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-------QERGYFPC------ 509
           F RM+  G  P+ +T+  L+D   K G   +A E++ ++           YFPC      
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375

Query: 510 ---TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                TY  +++ L +  + +    LL  M + G  PN + Y  L+D + ++G+ D A E
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                       F  M   G  PS     SLI+   +D R   A  VL  M ++   P+V
Sbjct: 436 -----------VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNV 484

Query: 627 VTYTTLMKALIRVDKFHKVF 646
           VTYT ++  L R+ +  K  
Sbjct: 485 VTYTAMIDGLCRIGESEKAL 504



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 181/445 (40%), Gaps = 25/445 (5%)

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M + G+  D         +L +  +   +L       IE +  +LD  L   +I G  +A
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADAL-----DMIEREDFKLDTVLCTHMISGLMEA 55

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +AM FL   +     P   TY  +++      +    + +   +   G  P    +
Sbjct: 56  SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLF 115

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES------ARIV 392
           N+L+  Y        A  +++ M   G  P    Y++ I +     +  S      A  +
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175

Query: 393 LKEMEVSHA---KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             EM  ++    K N   ++R L G    G++ + FQ++KEM   G  PDT  Y+ +I  
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 232

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 +  A   F  M   G+ PD  T+  LID   K G  ++A+ LFEEM+  G  P 
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC-- 567
             TY  +I+   + ++      +   M   G  PN VTY  LVD   ++G    A E   
Sbjct: 293 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 352

Query: 568 -LEGLSDQAVNAFRVMRTD--GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
            L G SD A + F     D   L P+ +   +L++   +  +   A  +L  M  +G +P
Sbjct: 353 KLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEP 412

Query: 625 DVVTYTTLMKALI---RVDKFHKVF 646
           + + Y  L+       ++D   +VF
Sbjct: 413 NHIVYDALIDGFCKAGKIDSAQEVF 437



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 192/426 (45%), Gaps = 27/426 (6%)

Query: 128 LWHSLLKNLCSSNSSIDLAY-AVVSWLQK-HNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++H ++   C  N   D+ Y A+V  L K  N+  ++E+   ++  +       Y  F  
Sbjct: 315 IFHRMVDAGCRPN---DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--FPC 369

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R  L P  +TY AL+    +   ++ A  L+  M   G   + I Y  +I    +  K
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429

Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           IDS+  Q+++ ++ +C  +         +I    K G    AM+ L        +P   T
Sbjct: 430 IDSA--QEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I  L   G + +A  +   ++E G  P    Y AL+ G  K G +  +  + ++M 
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 546

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE-W 421
           R G  P+  TY +LI+    AG  + AR++L EM+ ++       + + L GYR   + +
Sbjct: 547 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY-------WPKYLQGYRCAIQGF 599

Query: 422 QRTF----QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS--EGIEPDT 475
            ++F     +L+EM+S G  P    Y ++ID F K   L  AM     M+     ++ D 
Sbjct: 600 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 659

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             + +LI       + + A  L+ EM  RG+ P  + +  +I  L E ++W++  +L   
Sbjct: 660 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 719

Query: 536 MRAQGL 541
           +  +G+
Sbjct: 720 ICHEGV 725


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 208/435 (47%), Gaps = 13/435 (2%)

Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
           A  R+D +  +L    KM +        + ++VI  L +  +++ +  + L  E+    I
Sbjct: 189 ALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERA--KDLMLEMTGKGI 246

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           + +    N ++  + K  D       L + +   +    ATY  +I    +SG+  EAE 
Sbjct: 247 KPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEK 306

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VFE++ E G++     + +++    K+G +K A  +  E+   G++ + HTY  LI    
Sbjct: 307 VFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTC 366

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           N+G+ ++A +++ EM+      N  I++ ++ GY  +G      ++   M+  G E D  
Sbjct: 367 NSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIF 426

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            YN +     K N    A      M+ +G++P+ +++  +ID H K G    AE +F++M
Sbjct: 427 TYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDM 486

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +++G  P   TYN +I+   ++ + ++  RL   M + G+  ++ TYTTLV  +G     
Sbjct: 487 KKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLV--HG----- 539

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
               EC+ G  ++A+     +   GL  S +   ++I+   ++ R  EAF +   M   G
Sbjct: 540 ----ECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595

Query: 622 LKPDVVTYTTLMKAL 636
           L PD   YT+L+  L
Sbjct: 596 LTPDDRVYTSLVANL 610



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 179/393 (45%), Gaps = 11/393 (2%)

Query: 167 SILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           +I+I  L   GR E+  +  L    + + P  +TYN L++A  +  D E    ++  M  
Sbjct: 219 TIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEM 278

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           D    +   Y+L+I+    + KI  +  +K+++++    +E D  +   +I    K G+ 
Sbjct: 279 DKVVYNAATYTLLIEWYGSSGKIAEA--EKVFEKMLERGVEADIHVFTSIISWQCKLGNM 336

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A          GL     TY A+I    NSG+   AE +  E++  GL      +N L
Sbjct: 337 KRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTL 396

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY K G + +A  +   ME+ G   D  TY+ +        R E A+  L  M     
Sbjct: 397 INGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGV 456

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN+  ++ ++  +   G      +V ++MK  G +P+   YN +ID + K   L  A  
Sbjct: 457 DPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYR 516

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             D M S G+  D  T+ TL+  H +C  G+ + A  L  E+  +G      TY  +I+ 
Sbjct: 517 LKDEMESIGMTSDIYTYTTLV--HGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISG 574

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L ++ R E+  RL   M A GL P+   YT+LV
Sbjct: 575 LSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 46/374 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL     +    + AL  S + + +   F+++ E  +     +   ++ G  K G ++ A
Sbjct: 175 GLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERA 234

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + ++ EM   G+ P+  TY+ L++AY     +E    +L+ ME+     N+  Y+ ++  
Sbjct: 235 KDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEW 294

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD---------- 464
           Y   G+     +V ++M   GVE D H +  +I    K   +  A A FD          
Sbjct: 295 YGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVAN 354

Query: 465 -------------------------RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
                                     M S+G++ + + +NTLI+ + K G  D A  + +
Sbjct: 355 AHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQD 414

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M+++G+     TYN +   L +  R E+ KR L  M  +G+ PN V++T ++DI+    
Sbjct: 415 VMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIH---- 470

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C EG   +A   F+ M+  G KP+ +  N+LI+ + +  +  EA+ +   M+ 
Sbjct: 471 -------CKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMES 523

Query: 620 NGLKPDVVTYTTLM 633
            G+  D+ TYTTL+
Sbjct: 524 IGMTSDIYTYTTLV 537



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 2/258 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY ALI     +  L+ A  L+++M+  G   + + ++ +I    +   ID +L  ++  
Sbjct: 357 TYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEAL--RMQD 414

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E    E D    N +  G  K     +A R+L      G+ P   ++  +I      G
Sbjct: 415 VMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEG 474

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +EAE VF+++K+ G KP    YN L+ GY K G LK+A  +  EME  G+  D +TY+
Sbjct: 475 NLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYT 534

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+      G+ E A  +L E+       +   Y+ I++G    G  +  F++  EM ++
Sbjct: 535 TLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAA 594

Query: 435 GVEPDTHFYNVMIDTFGK 452
           G+ PD   Y  ++    K
Sbjct: 595 GLTPDDRVYTSLVANLHK 612



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 47/286 (16%)

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
           ++ +++ID     GR E A+ ++ EM     KPN   Y+ ++  Y    +++   ++L+ 
Sbjct: 216 YSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRL 275

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+   V  +   Y ++I+ +G    +  A   F++ML  G+E D   + ++I    K G 
Sbjct: 276 MEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGN 335

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             RA  LF+E+ ERG                                   L+ N  TY  
Sbjct: 336 MKRAFALFDELNERG-----------------------------------LVANAHTYGA 360

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+     SG+ D A        +  VN    M++ GL  + +  N+LIN + +     EA
Sbjct: 361 LIHGTCNSGQLDAA--------EMLVNE---MQSQGLDMNLVIFNTLINGYCKKGMIDEA 409

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
             +   M++ G + D+ TY T+   L ++++ H+    +LF  + K
Sbjct: 410 LRMQDVMEKKGFENDIFTYNTIAGGLCKLNR-HEEAKRWLFTMVEK 454



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 11/219 (5%)

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y D   ++  F+V   M  +G++ D     V +    + + +  ++  F +M+   ++  
Sbjct: 155 YVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVT 214

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             +   +ID   K GR +RA++L  EM  +G  P   TYN ++N   +   +E V  +L 
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR 274

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M    ++ N  TYT L++ YG SG+  +A +  E + ++ V A   + T        ++
Sbjct: 275 LMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFT--------SI 326

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            S     G  +R   AFA+   + E GL  +  TY  L+
Sbjct: 327 ISWQCKLGNMKR---AFALFDELNERGLVANAHTYGALI 362


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 211/491 (42%), Gaps = 56/491 (11%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
            +YN L++     +  ++AL L+  M  DG  C  D ++YS VI    +   +D  L Q+
Sbjct: 52  FSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKMLDQR 111

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +   +            N +I    KA    KAM  L      G+ P   TY +++    
Sbjct: 112 ISPNV---------VTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           +SG+  EA    ++++  G++P    YN+L+    K G   +A  +   M + G+ PD  
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY  L+  YA  G       +L  M  +   PN +++S ++  Y  + + +    V  +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G+ P+   Y  +ID   K   +  AM  F++M+ EG+ PD+I +N+LI       ++
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT---- 547
           ++AEELF EM +RG    T  +N +I+   ++ R  +  +L   M   G+ P+++T    
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRF 402

Query: 548 -------YTTLVDIY----GQSGRFDDAIE------------------------------ 566
                  Y+  V+IY      S   D   E                              
Sbjct: 403 LGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGL 462

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C   L+D A+  F+ +    LK      N +I+A  +  R+ EA  +      NGL P+ 
Sbjct: 463 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 522

Query: 627 VTYTTLMKALI 637
            TY  + + +I
Sbjct: 523 WTYRLMAENII 533



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 151/329 (45%), Gaps = 21/329 (6%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLPDEHTYSL 375
           +A  VF+EL   G+ P   +YN LL G       ++A  ++  M   G    PD  +YS 
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+ +   G        L +M      PN   Y+ I+A         +  +VL  M  SG
Sbjct: 94  VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V PD   YN ++  F        A+    +M S+G+EPD +T+N+L+D   K GR   A 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++F+ M +RG  P  TTY  ++     +    ++  LL  M   G+ PN   ++ LV  Y
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            +  + ++A+             F  MR  GL P+ +   ++I+   +  R  +A    +
Sbjct: 267 AKQEKVEEAML-----------VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFE 315

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            M + GL+PD + Y +L+ +L   DK+ K
Sbjct: 316 QMIDEGLRPDSIVYNSLIHSLCIFDKWEK 344



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 32/439 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++S++  LC +  ++D A  V++ + K  +     + Y+ ++H    S +  EA +  ++
Sbjct: 119 YNSIIAALCKA-QTVDKAMEVLTTMVKSGVMPDC-MTYNSIVHGFCSSGQPKEAIVFLKK 176

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            R   + P  +TYN+L+    +N    +A  +   M + G   D   Y  ++Q       
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L   +  + I  +  + + ++  +AK     +AM      +  GL+P   TY
Sbjct: 237 LVE--MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTY 294

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L  SGR  +A   FE++ + GL+P +  YN+L+         + AE +  EM  
Sbjct: 295 GTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 354

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQ 422
            G+      ++ +ID++   GR   +  +   M     KP+     R L +  RD   + 
Sbjct: 355 RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFV 414

Query: 423 RTFQVLKEMKSSGVE--------------------PDTHFYNVMIDTFGKYNCLHHAMAA 462
             + +   M ++G +                    P    YN+++    K      A+  
Sbjct: 415 NIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRM 474

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-NLLG 521
           F  +    ++ +  T+N +ID   K GR D A++LF      G  P   TY +M  N++G
Sbjct: 475 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 534

Query: 522 EQERWEDVKRLLGNMRAQG 540
            Q   E++ +L  +M   G
Sbjct: 535 -QGLLEELDQLFLSMEDNG 552



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 23/177 (12%)

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG--LLPNVVTYTTL 551
           A  +F+E+  RG  P   +YNI++N L ++ R ++   LL  M   G    P+VV+Y+T+
Sbjct: 36  ARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 552 VDIYGQSGRFDDAIE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           ++ + + G  D  ++                 C     D+A+     M   G+ P  +  
Sbjct: 95  INGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 154

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
           NS+++ F    +  EA   L+ M+ +G++PDVVTY +LM  L    R  +  K+F S
Sbjct: 155 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 211



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 137/356 (38%), Gaps = 65/356 (18%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           ++SIL+ A  + EK+ EA L+  + R   L P  +TY  +I    ++  +E A+    +M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
             +G   D I Y+ +I SL   +K + +  ++L+ E+    I L     N +I    K G
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKA--EELFLEMLDRGICLSTIFFNSIIDSHCKEG 375

Query: 280 -------------------DASKAMRFLGMAQ---------------------------- 292
                              D     RFLG A+                            
Sbjct: 376 RVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPV 435

Query: 293 ---------GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
                         P   TY  ++  L  +  T +A  +F+ L    LK   + +N ++ 
Sbjct: 436 NTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 495

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
             +K+G   +A+ +      +G++P+  TY L+ +     G  E    +   ME +    
Sbjct: 496 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 555

Query: 404 NSFIYSRILAGYRDRGEWQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +S + + I+     RGE  R  T+  + + K   +E  T    + + + GKY   H
Sbjct: 556 DSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYH 611


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 209/450 (46%), Gaps = 15/450 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  LI +     ++E  L ++    + G+  D   Y++ + +L   NK+   L++ L+ 
Sbjct: 92  TFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNKL--KLVEMLHS 147

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  + I LD    N +I    KA     A+  L      GL P   T+  ++      G
Sbjct: 148 KMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEG 207

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  + +++   G      +   L+ G+ K G +++A   V E+   G  PD+ T++
Sbjct: 208 DLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN 267

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ +   G    A  ++  M      P+ + Y+ +++G    GE+++  ++L++M   
Sbjct: 268 SLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILR 327

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              P+T  YN +I    K N +  A      ++S+G+ PD  T+NTLI         D A
Sbjct: 328 ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIA 387

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E+FEEM+ +G  P   TY+I+I+ L  + R ++   LL  M + G   N V Y TL+D 
Sbjct: 388 MEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDG 447

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +S R +DA E            F  M   G+  S++  N+LI+   +++R  EA  ++
Sbjct: 448 LCKSRRIEDAEE-----------IFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLM 496

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             M   GLKPD  TY +L+    RV    K
Sbjct: 497 DQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 212/478 (44%), Gaps = 22/478 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +++LI AL ++ +L  A L+ +      L P  +T+  L+       DL  AL +  +M 
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220

Query: 221 QDGYHCDFINYSL--VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             GY C   N S+  ++    +  +++ +L  +   E+  +    D    N ++ GF + 
Sbjct: 221 --GYGCLLTNVSVKVLVNGFCKEGRVEEAL--RFVLEVSEEGFSPDQVTFNSLVNGFCRI 276

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ + A+  +      G  P   TY ++I+ +   G   +A  + +++      P T  Y
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 336

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+    K   ++ A  +   +   G+LPD  T++ LI     +   + A  + +EM+ 
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+ F YS ++         +    +LKEM+SSG   +   YN +ID   K   +  
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD+M   G+   ++T+NTLID   K  R + A +L ++M   G  P   TYN ++ 
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                   E    ++  M + G  P++ TY TL+    ++GR D A + L          
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL---------- 566

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            R ++  G+  +  A N +I A    +R  E   + + M E    PD +T+  + + L
Sbjct: 567 -RSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGL 623



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/320 (21%), Positives = 137/320 (42%), Gaps = 16/320 (5%)

Query: 129 WHSLLKNLCSSN---SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK---LYEA 182
           +++L+  LC  N   ++ DLA  +VS     ++C      ++ LI  L  S+      E 
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCT-----FNTLIQGLCLSKNQDIAMEM 390

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F   + +   P   TY+ LI +      L++AL L+ +M   G   + + Y+ +I  L +
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           + +I+ +  ++++ ++E   +       N +I G  K     +A + +      GL P  
Sbjct: 451 SRRIEDA--EEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY +++T     G   +A  + + +  +G +P    Y  L+ G  + G +  A  ++  
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRG 419
           ++  G++   H Y+ +I A     R +    + +EM      P++  +  +  G     G
Sbjct: 569 VQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGG 628

Query: 420 EWQRTFQVLKEMKSSGVEPD 439
             Q       EM   G+ P+
Sbjct: 629 PIQEAIDFTVEMLEKGILPE 648


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 190/399 (47%), Gaps = 13/399 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY AL+        + +A+ +   MR D    D   Y+ ++  L    +  +   + 
Sbjct: 141 TAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR--TEEAEV 198

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           L +E   +  E +  + N +I G+  AG+   A++      G   SP   TY  +I  L 
Sbjct: 199 LLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLC 258

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            SG+   A  +F  + E+GL+P    Y AL++G    G+L+ A  ++  ME +G++P++ 
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T+S+LIDA     + E A++ L  +     K N  +Y+ ++ G    G+     +++++M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            S G  PD H Y+ +ID   +   L  A    + M+ +GI+   +T+  +ID   +    
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +  +++F++M   G  P   TY + +    E+ R ED + ++  M  +G+ PN+VTY TL
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           +  Y              GL  QA + F VM   G KP+
Sbjct: 499 IRGYANL-----------GLVSQAFSTFEVMVGKGWKPN 526



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 226/484 (46%), Gaps = 18/484 (3%)

Query: 169 LIHALGRSEKLYEAFLLSQRQRLTPL-TYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L+ AL R     +   L+ R     L TY  LI+A     D+  A   ++ +   G   D
Sbjct: 47  LLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPD 106

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR- 286
              Y+  +    R   +  +   +++  +              ++ G   AG   +AM  
Sbjct: 107 SYAYTSFVLGYCRAGMLTHAC--RVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           F+GM +    +P T  YA ++  L  +GRT EAE + EE   +G +P    YNAL+ GY 
Sbjct: 165 FVGM-RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYC 223

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G ++ A  V   M+ +   P+  TY+ LI     +G+ E A ++   M  +  +PN  
Sbjct: 224 NAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVV 283

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G  + G  Q  F++L  M+++G+ P+   ++V+ID   K   +  A      +
Sbjct: 284 TYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSL 343

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           + +G++ + + + +LID   K G+ D A+EL ++M   G+ P   +Y+ +I+ L  Q++ 
Sbjct: 344 VKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKL 403

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVD-IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
                +L +M  +G+  + VTYT ++D +  + G            S+     F  M   
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVG------------SEGPKKIFDKMIAT 451

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           G+ P  +     + ++ E+ R  +A +++  M + G+ P++VTY TL++    +    + 
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511

Query: 646 FSSY 649
           FS++
Sbjct: 512 FSTF 515



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 15/372 (4%)

Query: 157 NLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEK 211
           N C      Y+ LIH L +S K+  A +L  R     L P  +TY ALI        L+ 
Sbjct: 241 NRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQC 300

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLN 269
           A  L+  M  +G   +   +S++I +L +  K++ +   L  L K+     ++++  +  
Sbjct: 301 AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK----GVKVNEVVYT 356

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K G    A   +      G  P   +Y+++I  L    +  +A  + E++ E 
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G++     Y  ++   V+    +  + +  +M  +G+ PD  TY++ + +Y   GR E A
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDA 476

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             ++ +M      PN   Y+ ++ GY + G   + F   + M   G +P+   Y V++  
Sbjct: 477 ESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRL 536

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEP---DTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
             K +   +++  +     + ++    D I W  LI    + G       L   M+E GY
Sbjct: 537 VVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGY 596

Query: 507 FPCTTTYNIMIN 518
            P + T N MI 
Sbjct: 597 QP-SNTINAMIT 607



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/383 (21%), Positives = 165/383 (43%), Gaps = 21/383 (5%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G  E   + F      R +P   TY  LI    ++  +E+A+ L S+M + G   + + Y
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND-----VIVGFAKAGDASKAMR 286
           + +IQ      + +   LQ  ++ +    +E +G + ND     +I    K     +A  
Sbjct: 286 TALIQ-----GQCNEGHLQCAFRLLHL--METNGLVPNDWTFSVLIDALCKREKVEEAQL 338

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FLG     G+      Y ++I  L  +G+   A+ + +++   G  P   +Y++L+ G  
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           +   L  A  ++ +M   G+     TY+++ID        E  + +  +M  +   P+  
Sbjct: 399 RQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIV 458

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+  +  Y + G  +    ++ +M   GV P+   YN +I  +     +  A + F+ M
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM 518

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELF-----EEMQERGYFPCTTTYNIMINLLG 521
           + +G +P+  ++  L+    K    D + +++     +++QE  Y      + I+I  L 
Sbjct: 519 VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYD--EIVWKILIYGLL 576

Query: 522 EQERWEDVKRLLGNMRAQGLLPN 544
           ++    +   LL  M+  G  P+
Sbjct: 577 QKGSVAEFSSLLSVMKEHGYQPS 599


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 13/441 (2%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N +I++      +    +++  M + G     + ++++I  L     +  ++  +L   +
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAV--ELVDHV 172

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           E      D +    +I G  K G  S+A+ +L   +    +P    Y+ V+  L   G  
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            EA  +  E+   G+KP    Y  L++G    G  K+A  ++ EM + GV+PD  + ++L
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +D     G+   A+ V+  M +    P+ F Y+ ++  Y  + +     +V + M S G 
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            PD   Y  +I  + K   ++ AM   D M+  G  PD +TW TLI    + GR   A+E
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           LF  M + G  P   T  I+++ L + +   +   L   M    L  N+V Y+ ++D   
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMC 472

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
            +G+ + A+E            F  +   GL+ +  A   +IN F +     +A  +L  
Sbjct: 473 SAGKLNTALE-----------LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSN 521

Query: 617 MKENGLKPDVVTYTTLMKALI 637
           M+ENG  PD  TY   ++ L+
Sbjct: 522 MEENGCMPDSCTYNVFVQGLV 542



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 187/455 (41%), Gaps = 27/455 (5%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD-KIELDGQL 267
           +++ALN    M +       I+++L++  + +     +++   L KE+     I+ D  +
Sbjct: 56  IDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI--SLVKEMHSSLGIKPDTFI 113

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           LN VI         +     LG    +GL P   T+  +I  L   G    A  + + ++
Sbjct: 114 LNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVE 173

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           ++G +   K Y  L+ G  KMG   +A   + +ME     P+   YS ++D     G   
Sbjct: 174 KTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVS 233

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
            A  +  EM     KPN   Y+ ++ G  + G W+    +L EM   GV PD    N+++
Sbjct: 234 EALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILV 293

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K   +  A +    M+  G  PD  T+N+LID +    + D A  +FE M  RG  
Sbjct: 294 DVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCL 353

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
           P    Y  +I+   + +       LL  M   G  P+VVT+TTL+  + Q GR   A E 
Sbjct: 354 PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413

Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
                                  C   L  +A++ F  M    L  + +  + +++    
Sbjct: 414 FLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             +   A  +   +   GL+ +V  YT ++    +
Sbjct: 474 AGKLNTALELFSCLPAKGLQINVYAYTIMINGFAK 508



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 18/341 (5%)

Query: 319 AEAVFEELKES-GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           A ++ +E+  S G+KP T   N ++     +  +     V+  M + G+ P   T+++LI
Sbjct: 94  AISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILI 153

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +     G    A  ++  +E +  + +   Y  ++ G    G+       L++M+     
Sbjct: 154 NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN 213

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAE 495
           P+   Y+ ++D   K   +  A+     M  +GI+P+ +T+  LI   C+F  GR+  A 
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF--GRWKEAG 271

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L +EM + G  P   + NI++++L ++ +    K ++G M   G +P+V TY +L+D Y
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      CL+   D+A   F +M + G  P  +A  SLI+ + + +   +A  +L 
Sbjct: 332 -----------CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
            M + G  PDVVT+TTL+    +V +   + +  LF N++K
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQVGR--PLAAKELFLNMHK 419



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 178/396 (44%), Gaps = 13/396 (3%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y +LI+ L +  K  EA  +L    +R   P  + Y+ ++    ++  + +AL L  +M 
Sbjct: 184 YGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS 243

Query: 221 QDGYHCDFINYSLVIQSLTRTN--KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
             G   + + Y+ +IQ L      K   SLL ++ K      +  D Q LN ++    K 
Sbjct: 244 GKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKM----GVMPDLQSLNILVDVLCKE 299

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A   +G    VG  P   TY ++I       +  EA  VFE +   G  P   AY
Sbjct: 300 GKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            +L+ G+ K+  +  A  ++ EM + G  PD  T++ LI  +   GR  +A+ +   M  
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN    + IL G            +   M+ S ++ +   Y++++D       L+ 
Sbjct: 420 YGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNT 479

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI- 517
           A+  F  + ++G++ +   +  +I+   K G  D+AE+L   M+E G  P + TYN+ + 
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            L+ E+E    +K L   MR +G   +  T   +++
Sbjct: 540 GLVAEREIARSIKYLT-MMRDKGFSVDATTTEMIIN 574


>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
 gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
          Length = 900

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 230/491 (46%), Gaps = 21/491 (4%)

Query: 164 LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
            +++ L+HA   +  +  A      + S+   LT +TY+ LIS  A+ +D + A NL  +
Sbjct: 299 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKE 358

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
            +      + I YS +I +  ++  ++ +  ++L  E+E D I+    + + ++ G+   
Sbjct: 359 AKTKLSSLNGIIYSNIIHAHCQSGNMERA--EELVCEMEEDGIDAPIDVYHSMMHGYTII 416

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            + +K +      +  G  P   +Y  ++      G+  +A ++ +E++  G+K   K Y
Sbjct: 417 QNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 476

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + L+ G++ +    +A  +  EM RSG+ PD   Y+LLI+A+   G  + A  +L++M+ 
Sbjct: 477 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 536

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P++  +  I+ GY   G+ +     L  M+ SG  P    YN +I    + + +  
Sbjct: 537 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 596

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A++  D+M   GI P+  T+  ++  +   G   +A E F +++E G       Y  ++ 
Sbjct: 597 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 656

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +  R +    +   M  Q +  N   Y  L+D + + G   D  E        A + 
Sbjct: 657 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG---DVWE--------AEDL 705

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + M+ DG+ P+     S INA  +      A  V++ M + GLKP+V TYTTL+K   R
Sbjct: 706 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWAR 765

Query: 639 V---DKFHKVF 646
           V   D+  K F
Sbjct: 766 VSLPDRALKCF 776



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 221/489 (45%), Gaps = 24/489 (4%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRL-TPL-TYNALISACARNDDLEKALNLMSK 218
           ++YS +IHA    G  E+  E     +   +  P+  Y++++       +  K L +  +
Sbjct: 369 IIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFER 428

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           +++ G+    I+Y  ++    +  K+  +L   + KE+E   I+ + +  + +I GF   
Sbjct: 429 LKECGFKPSIISYGCLLNLYVKIGKVAKAL--SISKEMESCGIKHNNKTYSMLINGFIHL 486

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
            D + A          GL P  A Y  +I A    G    A  + E++++  ++P  +A+
Sbjct: 487 HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAF 546

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +++GY   G +K A   +  M RSG +P   TY+ LI       + + A  VL +M +
Sbjct: 547 RPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSI 606

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           +   PN   Y+ I+ GY   G+  + F+   ++K SG++ D + Y  ++    K   +  
Sbjct: 607 AGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 666

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+A    M  + I  +T  +N LID   + G    AE+L ++M+E G  P   TY   IN
Sbjct: 667 ALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYIN 726

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
              +    +  ++++  M   GL PNV TYTTL+  + +             L D+A+  
Sbjct: 727 ACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV-----------SLPDRALKC 775

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVVTYTTL 632
           F  M+  GLKP   + + L+ +        E        +V + M EN L  D+ T    
Sbjct: 776 FEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVHW 835

Query: 633 MKALIRVDK 641
            + L ++++
Sbjct: 836 SRWLHKIER 844



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/555 (23%), Positives = 221/555 (39%), Gaps = 69/555 (12%)

Query: 122 RAVPAPLWHSLLKNLCSS-----NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS 176
           R  P   WH      C        S  D   AVVS  ++       E    I+ +A    
Sbjct: 219 RREPRSPWHEGRDEACREFRRVVESRPDNWQAVVSAFERIPKPSRREFGLMIVYYAKRGD 278

Query: 177 EKLYEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           +    A   + R R + P    + +L+ A A   D+  AL+ + +M+ +G     + YS+
Sbjct: 279 KHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSI 338

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
           +I    + N  DS     L+KE    K +L    LN +I                     
Sbjct: 339 LISGFAKIN--DSQSADNLFKEA---KTKLSS--LNGII--------------------- 370

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
                    Y+ +I A   SG    AE +  E++E G+      Y++++ GY  +     
Sbjct: 371 ---------YSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENK 421

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              V   ++  G  P   +Y  L++ Y   G+   A  + KEME    K N+  YS ++ 
Sbjct: 422 CLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLIN 481

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+    ++   F + +EM  SG++PD   YN++I+ F K   +  A+   ++M  E ++P
Sbjct: 482 GFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 541

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
               +  +I+ +   G    A +  + M+  G  P   TYN +I+ L  + + +    +L
Sbjct: 542 SNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVL 601

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M   G+ PN  TYT ++  Y  SG    A E                        C  
Sbjct: 602 DKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKS 661

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           G    A+   R M    +  +    N LI+ +       EA  +++ MKE+G+ P++ TY
Sbjct: 662 GRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTY 721

Query: 630 TTLMKALIRVDKFHK 644
           T+ + A  +     +
Sbjct: 722 TSYINACCKAGDMQR 736



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +I   +  G    A A FE ++  G++P    + +L+  Y     ++ A   
Sbjct: 261 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 320

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS+LI  +A     +SA  + KE +   +  N  IYS I+  +  
Sbjct: 321 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 380

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G  +R  +++ EM+  G++     Y+ M+  +      +  +  F+R+   G +P  I+
Sbjct: 381 SGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 440

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  L++ + K G+  +A  + +EM+  G      TY+++IN       + +   +   M 
Sbjct: 441 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 500

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  L++ + + G  D AI  LE            M+ + ++PSN A   +
Sbjct: 501 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK-----------MQKERMQPSNRAFRPI 549

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  +        A   L  M+ +G  P V+TY  L+  L+R  K  +  S
Sbjct: 550 IEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 599



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 28/253 (11%)

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
           WQ      + +     +P    + +MI  + K    HHA A F+ M + GIEP+   + +
Sbjct: 248 WQAVVSAFERIP----KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTS 303

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+  +        A    EEM+  G      TY+I+I+   +    +    L    + + 
Sbjct: 304 LVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKL 363

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA---------------------- 578
              N + Y+ ++  + QSG  + A E +  + +  ++A                      
Sbjct: 364 SSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 423

Query: 579 --FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F  ++  G KPS ++   L+N + +  + A+A ++ + M+  G+K +  TY+ L+   
Sbjct: 424 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 483

Query: 637 IRVDKFHKVFSSY 649
           I +  F   F+ +
Sbjct: 484 IHLHDFANAFAIF 496


>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 172/329 (52%), Gaps = 12/329 (3%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGL-KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++ LS       A A+ + + +  L +P   AYN LL+  ++      A  +  EM + 
Sbjct: 114 MVSLLSREPDWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQK 173

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD +TYS LI  +   G ++S+   L++ME  +   +  +YS ++   R   ++ + 
Sbjct: 174 GLSPDRYTYSTLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKA 233

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +   +K+S + PD   YN MI+ FGK      A      M    ++PDT++++TL+  
Sbjct: 234 ISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAI 293

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           +    ++  A  LF EM E       TT NIMI++ G+    ++  RL  +MR  G+ PN
Sbjct: 294 YVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPN 353

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           V++Y TL+ +YG++  F +AI             FR+M++  ++ + +  N++IN +G+ 
Sbjct: 354 VISYNTLLRVYGEADLFGEAIHL-----------FRLMQSKDVQQNVVTYNTMINIYGKT 402

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
               +A  ++Q M + G++P+ +TY+T++
Sbjct: 403 LEHEKATNLIQEMNKRGIEPNAITYSTII 431



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 199/462 (43%), Gaps = 21/462 (4%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R +   YN L+    R      A  L  +MRQ G   D   YS +I    +    DSSL 
Sbjct: 141 RPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSSLF 200

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
               +++E D +  D  L +++I    K  D SKA+      +   ++P    Y ++I  
Sbjct: 201 --WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINV 258

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              +    EA  + +E++++ ++P T +Y+ LL  YV      +A  + SEM  +    D
Sbjct: 259 FGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLD 318

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T +++ID Y      + A  +   M     +PN   Y+ +L  Y +   +     + +
Sbjct: 319 LTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFR 378

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITWNTLIDCHFK 487
            M+S  V+ +   YN MI+ +GK   L H  A      M   GIEP+ IT++T+I    K
Sbjct: 379 LMQSKDVQQNVVTYNTMINIYGK--TLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEK 436

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G+ DRA  LF++++  G       Y  MI            KRLL  ++     P+ + 
Sbjct: 437 AGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKR----PDNIP 492

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
             T + I  ++GR ++A         QA +A  V               +IN F ++++ 
Sbjct: 493 RDTAIAILARAGRIEEATWVFR----QAFDAREVKDIS-------VFGCMINLFSKNKKY 541

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           A    V + M+E G  PD      ++ A  ++ +F K  + Y
Sbjct: 542 ANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALY 583



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 109/492 (22%), Positives = 201/492 (40%), Gaps = 83/492 (16%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALI 200
           A A++ W+    L       Y++L+  + R+++ + A  L    R   L+P   TY+ LI
Sbjct: 127 ALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLI 186

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
           +   ++   + +L  + +M QD    D + YS +I    + +  D S    ++  ++   
Sbjct: 187 TCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLS--DYSKAISIFSRLKAST 244

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           I  D    N +I  F KA    +A   L   +   + P T +Y+ ++    ++ + +EA 
Sbjct: 245 ITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEAL 304

Query: 321 AVFEELKES-----------------------------------GLKPRTKAYNALLKGY 345
           ++F E+ E+                                   G++P   +YN LL+ Y
Sbjct: 305 SLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVY 364

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            +     +A  +   M+   V  +  TY+ +I+ Y      E A  +++EM     +PN+
Sbjct: 365 GEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNA 424

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             YS I++ +   G+  R   + ++++SSGV  D   Y  MI  + +   + HA     R
Sbjct: 425 ITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHA----KR 480

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAE------------------------------ 495
           +L E   PD I  +T I    + GR + A                               
Sbjct: 481 LLHELKRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKK 540

Query: 496 -----ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG-LLPNVVTYT 549
                E+FE+M+E GYFP +    +++N  G+   ++    L   M  +G + P+ V + 
Sbjct: 541 YANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQ 600

Query: 550 TLVDIYGQSGRF 561
            L  +YG    F
Sbjct: 601 ML-SLYGARKDF 611



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 25/184 (13%)

Query: 491 YDRAEELFEEMQERG-YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + RA  L + + ++  Y P    YN+++  +   ++W     L   MR +GL P+  TY+
Sbjct: 124 WQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYS 183

Query: 550 TLVDIYGQSGRFDDA----------------------IECLEGLSD--QAVNAFRVMRTD 585
           TL+  +G+ G FD +                      I+    LSD  +A++ F  ++  
Sbjct: 184 TLITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAS 243

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            + P  +A NS+IN FG+ +   EA  +LQ M++N ++PD V+Y+TL+   +   KF + 
Sbjct: 244 TITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEA 303

Query: 646 FSSY 649
            S +
Sbjct: 304 LSLF 307


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T L ++ L+   +R   ++ +L ++ KM+    +    +Y+ V+     T+K     +  
Sbjct: 123 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 177

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +YKEI+ DK E      + V+ G  +      A+ FL  ++   + P   ++ ++++   
Sbjct: 178 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A++ F  + + GL P   ++N L+ G   +G + +A  + S+M + GV PD  
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++L   +   G    A  V+++M      P+   Y+ +L G    G       +LK+M
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353

Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
            S G E ++    +VM+    K   +  A++ F++M ++G+ PD + ++ +I    K G+
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D A  L++EM ++   P + T+  ++  L ++    + + LL ++ + G   ++V Y  
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++D Y +SG       C+E    +A+  F+V+   G+ PS    NSLI  + + Q  AEA
Sbjct: 474 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKA 635
             +L  +K  GL P VV+YTTLM A
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDA 547



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 200/475 (42%), Gaps = 66/475 (13%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YS V+  L R  K++ ++L    +  E   I       N ++ G+ K G    A  F   
Sbjct: 190 YSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   ++  +I  L   G   EA  +  ++ + G++P +  YN L KG+  +G 
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-YS 409
           +  A  V+ +M   G+ PD  TY++L+      G  +   ++LK+M     + NS I  S
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +L+G    G       +  +MK+ G+ PD   Y+++I    K      A+  +D M  +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 470 GIEP-----------------------------------DTITWNTLIDCHFKCGRYDRA 494
            I P                                   D + +N +ID + K G  + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF+ + E G  P   T+N +I    + +   + +++L  ++  GL P+VV+YTTL+D 
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           Y   G            + ++++  R  M+ +G+ P+N+  + +        +      V
Sbjct: 548 YANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595

Query: 614 LQY------------MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           L+             M+  G+ PD +TY T+++ L RV      F   +F  I K
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF---VFLEIMK 647



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++  L R +KL +A L    S+ + + P  +++N+++S   +   ++ A +    + 
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G      +++++I  L     I  +L  +L  ++    +E D    N +  GF   G 
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
            S A   +      GLSP   TY                                    +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +++ L  +GR  EA ++F ++K  GL P   AY+ ++ G  K+G    A ++  EM   
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            +LP+  T+  L+      G    AR +L  +  S    +  +Y+ ++ GY   G  +  
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++ K +  +G+ P    +N +I  + K   +  A    D +   G+ P  +++ TL+D 
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
           +  CG     +EL  EM+  G  P   TY+++   L             +ER +E  K+ 
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M ++G+ P+ +TY T++    +      A   LE           +M++  L  S+ 
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 656

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LI++        +A + +  ++E  +      YTTL+KA
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 51/372 (13%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + ++S   +   +++AL+L ++M+ DG   D + YS+VI  L +  K D +L   LY E+
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 424

Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
            CDK                      +E              LD  L N VI G+AK+G 
Sbjct: 425 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+    +    G++P  AT+ ++I     +    EA  + + +K  GL P   +Y  
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
           L+  Y   G  K  + +  EM+  G+ P   TYS++        + E+   VL+E     
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603

Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                  ME     P+   Y+ I+            F  L+ MKS  ++  +  YN++ID
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +   Y  +  A +    +  + +      + TLI  H   G  + A +LF ++  RG+  
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723

Query: 509 CTTTYNIMINLL 520
               Y+ +IN L
Sbjct: 724 SIRDYSAVINRL 735



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 60/325 (18%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +++K+  L   T++YN++L  + +   + D   V  E++      +EHTYS ++D   
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKDK----NEHTYSTVVDGLC 198

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              + E A + L+  E     P+   ++ I++GY   G                      
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 236

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                +D          A + F  +L  G+ P   + N LI+     G    A EL  +M
Sbjct: 237 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            + G  P + TYNI+    +LLG     WE ++    +M  +GL P+V+TYT L+    Q
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 339

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G  D  +  L+   D     F +   + + P ++ L+ L        R  EA ++   M
Sbjct: 340 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 389

Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
           K +GL PD+V Y+ ++  L ++ KF
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKF 414


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 238/545 (43%), Gaps = 63/545 (11%)

Query: 116 KLAESYR---------AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLY 166
           +L E+YR           P+ + +S+  N       ID A  V+  + +       E++Y
Sbjct: 306 RLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGF-VPNEVVY 364

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           + LI    +   + EA      +LS+      +T N+LI    ++D + +A N++ +M  
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   +  ++S+VI  L    +  ++L     +E+    +  +  LL  ++ G  KAG  
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTAL--HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ 482

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A+       G G  P   T  A+I  L  +G   E   +  ++ E GL      YN L
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + G  K G +K+   +  EM + G+ PD +T++LL+    NA + + A            
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA------------ 590

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
                  SR+         W        E K +G  P+ + Y VMID + K N +     
Sbjct: 591 -------SRL---------WH-------ECKKNGYVPNVYTYGVMIDGYCKANKVEEGEN 627

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             + ++S+ +E +++ +N+LI  +   G  + A  L ++M+ RG      TY+ +++ L 
Sbjct: 628 LLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLC 687

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
                +D K LL  MR +GLLPNVV YTT++  Y + G+ +     L+ +S   ++    
Sbjct: 688 NIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH---- 743

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                  P+      +I+ F +  +  EA  +L  M E G+ PD VTY      L +  K
Sbjct: 744 -------PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGK 796

Query: 642 FHKVF 646
             + F
Sbjct: 797 VEEAF 801



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 219/506 (43%), Gaps = 31/506 (6%)

Query: 165 LYSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKM 219
           L+S +I+A  +  +  +A  L S+ ++L      +TYN +I    ++  L++A     KM
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            ++      I YS+ I  L +  KID +    + KE+       +  + N +I G+ K G
Sbjct: 318 VKEKVSPSLITYSVFINGLIKLEKIDEA--NCVLKEMSELGFVPNEVVYNTLIDGYCKMG 375

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           + S+A++        G+SP + T  ++I     S +  +AE V EE+   GL     +++
Sbjct: 376 NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++           A   + EM    + P++   + L+     AG+   A  +   +   
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN    + ++ G    G  Q T ++L++M   G+  D   YN +I    K   +   
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + M+ +GI+PD  T+N L+       + D A  L+ E ++ GY P   TY +MI+ 
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------- 566
             +  + E+ + LL  + ++ L  N V Y +L+  Y  +G  + A               
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675

Query: 567 -----------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  GL D A +    MR +GL P+ +   ++I  + +  +  +   VLQ
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQ 735

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDK 641
            M  + + P+  TYT ++    ++ K
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGK 761



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 190/434 (43%), Gaps = 21/434 (4%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A ++ S + + G        + ++ SL + N++  S   ++Y  I    I  D  L + +
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKS--YEVYDFICLGGIIPDVHLFSTM 262

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I  F K      A+      + +G++P   TY  +I  L  SGR  EA    E++ +  +
Sbjct: 263 INAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    Y+  + G +K+  + +A  V+ EM   G +P+E  Y+ LID Y   G    A  
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALK 382

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  +M      PNS   + ++ G+    +  +   VL+EM   G+  +   ++++I+   
Sbjct: 383 IRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVIN--- 439

Query: 452 KYNCLHH----AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
            + CL      A+     ML   + P+     TL+    K G+   A EL+  +  +G+ 
Sbjct: 440 -WLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV 498

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   T N +I+ L +    ++  +LL +M  +GL+ + +TY TL+    + G+  +  E 
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
            E            M   G++P     N L++      +  EA  +    K+NG  P+V 
Sbjct: 559 KEE-----------MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVY 607

Query: 628 TYTTLMKALIRVDK 641
           TY  ++    + +K
Sbjct: 608 TYGVMIDGYCKANK 621



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 24/352 (6%)

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  VF  L + GL P  K    LL   VK   LK +  V   +   G++PD H +S +I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A+    R + A  +  +ME     PN   Y+ I+ G    G     ++  ++M    V P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               Y+V I+   K   +  A      M   G  P+ + +NTLID + K G    A ++ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           ++M  +G  P + T N +I    + ++    + +L  M  +GL  N  +++ +++     
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 559 GRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            RF  A+                         C  G   +AV  +  +   G  P+ +  
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           N+LI+   +     E   +L+ M E GL  D +TY TL+    +  K  + F
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 263/613 (42%), Gaps = 73/613 (11%)

Query: 82  YDFTPLLNFLSENSNSESASALASSPS-SLNRVEFKLAESYRAVPAP---LWHSLLKNLC 137
           +D   ++     NS S +    A S S S++ VE +L E   +   P      S+L+  C
Sbjct: 186 FDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYC 245

Query: 138 SSNSSIDLAYAVVS------WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-- 189
           +S    D A +V +      W+  H L        SIL+    +  ++ +AF L +R   
Sbjct: 246 NSRK-FDKALSVFNEIYGRGWVDGHVL--------SILVLTFSKCGEVDKAFELIERMED 296

Query: 190 ---RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              RL   T+  LI    R   ++KAL L  KM++ G+  D   Y  +I  L    +I+ 
Sbjct: 297 LGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEK 356

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA------------SKAMRFL--GMAQ 292
           +L   L  E++   I+ D Q+L+ +I   ++  D             ++AM  L   +  
Sbjct: 357 AL--HLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLN 414

Query: 293 GV--GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
           G+  G S   A Y        N     E    F  + +  ++P T +++ ++ G    G 
Sbjct: 415 GLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFF--MVKEMVRPDTTSFSIVIDGLCNTGK 472

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L  A  +  +M R G   +   Y+ LID  +N+ R E   ++LKEM+ S  +P  F ++ 
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I      R +      +++EM+  G EP    Y +++    K      A      M+ EG
Sbjct: 533 IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREG 592

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD + ++  ID   K    D+A E+F ++  RGY P    YN +IN   + +R  +  
Sbjct: 593 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 652

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE--------------------- 569
            +L  M A+GL+P+VVTY  L+D + ++G  D A  CL                      
Sbjct: 653 DILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGL 712

Query: 570 ---GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK--P 624
              G  D A++ +  MR  G  P+ ++  +LI+      +     A L Y +E G +  P
Sbjct: 713 CNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC---KCGWPDAALLYFREMGERETP 769

Query: 625 DVVTYTTLMKALI 637
           D + Y  L+ + I
Sbjct: 770 DTIVYVALITSFI 782



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 248/586 (42%), Gaps = 85/586 (14%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHA- 172
           +  R   + L H +++N+ S   S  +AY   +W        HN CY+Y  + S L HA 
Sbjct: 84  QELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNWASDQGGFNHN-CYTYNAMASCLSHAR 142

Query: 173 ------------------------------LGRSEKLYEAFLLSQRQRLTPL------TY 196
                                         LG +  + EA LL  + ++  L      ++
Sbjct: 143 QNAPLSLLSMDIVNSRCAMSPGALGFFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSF 202

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L+ A +++  ++     + +M   G+  D    + V+Q+   + K D +L   ++ EI
Sbjct: 203 NCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKAL--SVFNEI 260

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
              +  +DG +L+ +++ F+K G+  KA   +   + +G+     T+  +I       R 
Sbjct: 261 Y-GRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRV 319

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
            +A  +F+++++SG  P    Y+AL+ G      ++ A  ++SEM+  G+ PD    S L
Sbjct: 320 DKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKL 379

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG---------------------Y 415
           I AY +    +  R++ + +E    +    +Y+ +L G                     Y
Sbjct: 380 I-AYCSE-EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNY 437

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
            D  E  + F V KEM    V PDT  ++++ID       L  A++ F  M+  G + + 
Sbjct: 438 TDNFEVNKFFMV-KEM----VRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNV 492

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           + +N LID      R +    L +EM+  G+ P   T+N +   L  +E       ++  
Sbjct: 493 LLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVRE 552

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           MR  G  P +  YT LV    +  R           S +A N    M  +G  P  +A +
Sbjct: 553 MRVHGHEPWIKHYTLLVKQLCKRKR-----------SAEACNFLAEMVREGFLPDIVAYS 601

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           + I+ F + +   +A  + + +   G  PDVV Y TL+    +V +
Sbjct: 602 AAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKR 647



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 180/439 (41%), Gaps = 58/439 (13%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-- 189
           ++  LC++   +DLA ++   + +   C    LLY+ LI  L  S +L E +LL +    
Sbjct: 463 VIDGLCNT-GKLDLALSLFRDMVRVG-CKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG 520

Query: 190 ---RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              R T  T+N++     R +D+  AL+++ +MR  G+     +Y+L+++ L +  +   
Sbjct: 521 SGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKR--- 577

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                             +++A  FL      G  P    Y+A 
Sbjct: 578 ----------------------------------SAEACNFLAEMVREGFLPDIVAYSAA 603

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I          +A  +F ++   G  P   AYN L+ G+ K+  + +A  ++ EM   G+
Sbjct: 604 IDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGL 663

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           +P   TY+LLID +   G  + A   L  M     +PN   Y+ ++ G  + G       
Sbjct: 664 VPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIH 723

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  EM+  G  P+   +  +I    K      A+  F R + E   PDTI +  LI    
Sbjct: 724 LWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYF-REMGERETPDTIVYVALITSFI 782

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYN------IMINLLGEQERWEDVKRLLGNMRAQG 540
                  A E+ +EM  +G FP     N       ++ L  +     +VK L+    A+G
Sbjct: 783 SNKNPTLAFEILKEMVAKGKFPDPLDKNDLPLRDAILELAEDASTSSNVKNLI----AEG 838

Query: 541 LLPNVVTYTTLVDIYGQSG 559
            +P +V    L D+  + G
Sbjct: 839 RIPTIV---CLSDVGSEGG 854


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/558 (23%), Positives = 238/558 (42%), Gaps = 56/558 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-- 189
           ++K LC +   ID A+ +++ L++  +     + Y++L+ AL RS ++ EAF L  R   
Sbjct: 222 MIKALCRAGE-IDAAFVMLAELERSGI-QPTVVTYNVLMDALCRSGRVEEAFQLKGRMVE 279

Query: 190 -RLTP-------------------------------------LTYNALISACARNDDLEK 211
            RL P                                     + YN LI    R     +
Sbjct: 280 GRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSE 339

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL L  +M   G     + Y+L+ ++L +  +++ +  +++  E+    + +   L N V
Sbjct: 340 ALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHA--EQILDEMLLAGMTVHCSLFNSV 397

Query: 272 IVGFAKA-GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +    +  G     +R +       L P  A   A I  L   G+  EA  ++  +   G
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L       NAL+ G  +   +K+A  V+  M  SGV  D  TY+++I     A + E A 
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +  +M     KP+ F ++  L  Y + G+ +    +L +MKS G++PD   Y  +ID +
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +H A      ++  G+ P+ + +N LI  + + G    A  + + M+  G  P  
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN ++  +      E+ K +      + +   V+ YT ++  + + G+          
Sbjct: 638 ITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI--------- 688

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             D+AV  F+ M    ++P+ +   +L+ A+ +     EAF +   M  +G+ PD V+Y 
Sbjct: 689 --DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYN 746

Query: 631 TLMKALIRVDKFHKVFSS 648
           TL+     VD   K+  S
Sbjct: 747 TLISGCCEVDSLDKIVES 764



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 229/502 (45%), Gaps = 57/502 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQ-DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           T N L+ A      L+ A  +  +MR  +    D   Y+++I++L R  +ID++ +  + 
Sbjct: 182 TCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV--ML 239

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSN 312
            E+E   I+      N ++    ++G   +A +  G M +G  L P   T+  +I  L+ 
Sbjct: 240 AELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEG-RLRPSIVTFGILINGLAR 298

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             R  E +AV +E++  G+ P    YN L+  + + G+  +A  +  EM   G+     T
Sbjct: 299 GQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVT 358

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY-RDRGEWQRTFQVLKEM 431
           Y+L+  A    G  E A  +L EM ++    +  +++ ++A + R  G      ++++EM
Sbjct: 359 YNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREM 418

Query: 432 KSSGVEPDTHFY-----------------------------------NVMIDTFGKYNCL 456
            +  ++P+                                       N +I    + N +
Sbjct: 419 VARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNM 478

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A      M+  G+E D IT+N +I    K  + + A +L ++M +RG+ P   T+N  
Sbjct: 479 KEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTF 538

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +       + ED+  LL  M+++GL P++VTY T++D Y ++     A            
Sbjct: 539 LRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA------------ 586

Query: 577 NAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           N + + +  +GL+P+ +  N+LI  +G +   ++A  VL  MK NG++P  +TY +LM  
Sbjct: 587 NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYW 646

Query: 636 LIR---VDKFHKVFSSYLFFNI 654
           +     V++  ++F+  +  NI
Sbjct: 647 MCHAGLVEEAKEIFAQCILKNI 668



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 235/562 (41%), Gaps = 42/562 (7%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P+    ++L         +DLA  V   ++  N        Y+++I AL R+ ++  A
Sbjct: 176 ASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAA 235

Query: 183 FLLS---QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           F++    +R  + P  +TYN L+ A  R+  +E+A  L  +M +       + + ++I  
Sbjct: 236 FVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILING 295

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
           L R  +     +  + +E+E   I  +  + N +I    + G  S+A+R        G+ 
Sbjct: 296 LARGQRFGE--VDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIK 353

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK-MGYLKDAEF 356
               TY  +  AL   G    AE + +E+  +G+      +N+++  +++  G L     
Sbjct: 354 QTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLR 413

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR-----IVLKEMEVSHAKPNSFIYSRI 411
           ++ EM    + P++   +  I      G+ E A      ++ K + V+ A  N+ I+   
Sbjct: 414 LIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIH--- 470

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
             G       +   +VLK M  SGVE D   YN+MI    K + +  A+   D M+  G 
Sbjct: 471 --GLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGF 528

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           +PD  T+NT +  +   G+ +    L ++M+  G  P   TY  +I+   + +      +
Sbjct: 529 KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588

Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
            L  +   GL PN V Y  L+  YG++G   DAI                         C
Sbjct: 589 YLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMC 648

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             GL ++A   F       ++   +    +I  F +  +  EA    + M    ++P+ +
Sbjct: 649 HAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKM 708

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           TYTTLM A  +     + F  +
Sbjct: 709 TYTTLMYAYCKCGNKEEAFKLF 730



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 5/309 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T NALI    + +++++A  ++  M   G   D I Y+++IQ   + +K++ ++  +L  
Sbjct: 464 TSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI--QLRD 521

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++     + D    N  +  +   G     +  L   +  GL P   TY  +I     + 
Sbjct: 522 DMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 581

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +A     EL ++GL+P    YNAL+ GY + G + DA  V+  M+ +G+ P   TY+
Sbjct: 582 DVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+    +AG  E A+ +  +  + + +     Y+ I+ G+   G+        KEM   
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR 701

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P+   Y  ++  + K      A   FD M+S GI PDT+++NTLI     C   D  
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS---GCCEVDSL 758

Query: 495 EELFEEMQE 503
           +++ E   E
Sbjct: 759 DKIVESPAE 767



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 141/309 (45%), Gaps = 9/309 (2%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ-- 187
           ++L+  LC  N+  + A  V+  +    + +   + Y+I+I    ++ K+ EA  L    
Sbjct: 466 NALIHGLCQGNNMKE-ATKVLKAMVDSGVEFD-RITYNIMIQFCCKASKMEEAIQLRDDM 523

Query: 188 -RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
            ++   P   T+N  + A      +E  L+L+ +M+ +G   D + Y  +I    +   +
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
             +   K   E+  + +  +  + N +I G+ + G  S A+  L   +  G+ P   TY 
Sbjct: 584 HKA--NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++  + ++G   EA+ +F +     ++     Y  +++G+ K+G + +A     EM   
Sbjct: 642 SLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR 701

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            + P++ TY+ L+ AY   G  E A  +  EM  S   P++  Y+ +++G  +     + 
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKI 761

Query: 425 FQVLKEMKS 433
            +   EM S
Sbjct: 762 VESPAEMSS 770



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 12/158 (7%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVT 547
           G    A + F E+  RG  P   T NI++  LG   + +  +++ G MR    + P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           YT ++    ++G  D A   L  L              G++P+ +  N L++A     R 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAEL-----------ERSGIQPTVVTYNVLMDALCRSGRV 267

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            EAF +   M E  L+P +VT+  L+  L R  +F +V
Sbjct: 268 EEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEV 305


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/577 (23%), Positives = 260/577 (45%), Gaps = 44/577 (7%)

Query: 90  FLSENSNSESASALASSPSSLNR-VEFKLAE----------SYRAVPAPLWHSLLKNLCS 138
           FL +N   E A ++ S  + ++R  +  LA+           Y  +P    +++L +   
Sbjct: 172 FLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLI 231

Query: 139 SNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGR---SEKLYEAFLLSQRQRLT 192
              S++ A  + + ++K  L     +Y+++     H LG    + ++ +  L  +  +  
Sbjct: 232 VAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF-HLLGLMSGAREIIQKMLTDEGLKPD 290

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            +TY  LI    +  ++E+AL L   +   G+  + I YS+++ SL +  ++D +L Q L
Sbjct: 291 LVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL-QLL 349

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           Y E+E + ++ D    + +I G  K G   +A++         + P +  ++ ++  L  
Sbjct: 350 Y-EMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCE 408

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            G   +A   F+ L  S L+P    YN ++ GYVK+G +++A  +   +    + P   T
Sbjct: 409 KGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVT 468

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ LI  +    +   AR +L+ +++   +P++  Y+ ++  Y + G   +  ++L EM 
Sbjct: 469 FNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMN 528

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              +EP    Y V+I    K   L  ++   + M ++G+ PD IT+NT+I C  K     
Sbjct: 529 LKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMR 588

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A EL ++M      P   TYN++I+ L      ED  R+L +++ + +    V YTT++
Sbjct: 589 KAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMI 648

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
             +   G    A++                        C   L ++A   F +M +DG+ 
Sbjct: 649 KAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVS 708

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           P       ++NAF         F +L  M + GL  D
Sbjct: 709 PDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 213/478 (44%), Gaps = 19/478 (3%)

Query: 167 SILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
           SI++  L    +  +A L  ++   +   P  +++N ++S   +    + A +    M +
Sbjct: 154 SIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLK 213

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G   D  +Y+++I  L     ++ +L  +L  ++E   ++ D      V  GF   G  
Sbjct: 214 YGILPDTYSYNILIHGLIVAGSMEEAL--ELTNDMEKQGLQPDMVTYKIVAKGFHLLGLM 271

Query: 282 SKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           S A   +  M    GL P   TY  +I      G   EA  +  +L  SG +     Y+ 
Sbjct: 272 SGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSV 331

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL    K G + +A  ++ EME + + PD  TYS+LI      G+ + A  + KEM  + 
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PNSF +S IL G  ++G           +  S + PD   YN+MID + K   +  A+
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             + R+  + I P  +T+N+LI    K  +   A  L E ++  G  P   TY  ++N  
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAY 511

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            E+     +  LL  M  + + P VVTYT ++    +  + +++++ LE           
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED---------- 561

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            MR  GL P  +  N++I  F + +   +AF +L  M  + L+P   TY  L+  L R
Sbjct: 562 -MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCR 618



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 230/522 (44%), Gaps = 54/522 (10%)

Query: 166 YSILIHALGRSEKLYEAFLLS---QRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILIH L  +  + EA  L+   ++Q L P  +TY  +         +  A  ++ KM 
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282

Query: 221 QD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            D G   D + Y+++I    +   I+ +L  +L +++     +L+  L + ++    K G
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEAL--RLRRDLLSSGFQLNVILYSVLLSSLCKRG 340

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A++ L   +   L P   TY+ +I  L   G+  +A  +++E+  + + P + A++
Sbjct: 341 QVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHS 400

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE------------ 387
            +LKG  + G L DA      +  S + PD   Y+++ID Y   G  E            
Sbjct: 401 GILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDK 460

Query: 388 -----------------------SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
                                   AR +L+ +++   +P++  Y+ ++  Y + G   + 
Sbjct: 461 AITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKL 520

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++L EM    +EP    Y V+I    K   L  ++   + M ++G+ PD IT+NT+I C
Sbjct: 521 HELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQC 580

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K     +A EL ++M      P   TYN++I+ L      ED  R+L +++ + +   
Sbjct: 581 FCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLT 640

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
            V YTT++  +           C++G + +AV  F  M   G + S    +++IN   + 
Sbjct: 641 KVAYTTMIKAH-----------CVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKR 689

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
               EA      M  +G+ PD   +  ++ A  R    H VF
Sbjct: 690 CLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVF 731



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 213/439 (48%), Gaps = 20/439 (4%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL ++ KM++         Y+ ++ +L  T+     ++  +Y +I+        +  + +
Sbjct: 102 ALFVLVKMKEQNLRPSIQTYNSLLYNLRHTD-----IMWDVYNDIKDSGTPQSARTSSII 156

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G         A+ FL    G   +P   ++  +++     G    A++ F  + + G+
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI 216

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P T +YN L+ G +  G +++A  + ++ME+ G+ PD  TY ++   +   G    AR 
Sbjct: 217 LPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGARE 276

Query: 392 VLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++++M      KP+   Y+ ++ G+   G  +   ++ +++ SSG + +   Y+V++ + 
Sbjct: 277 IIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSL 336

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A+     M +  ++PD +T++ LI    K G+  +A +L++EM     FP +
Sbjct: 337 CKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNS 396

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
             ++ ++  L E+    D +    ++    L P+V  Y  ++D Y + G  ++A+   + 
Sbjct: 397 FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           L D+A+            PS +  NSLI  F ++++  EA  +L+ +K +GL+P  VTYT
Sbjct: 457 LRDKAIT-----------PSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505

Query: 631 TLMKALIR---VDKFHKVF 646
           TLM A      ++K H++ 
Sbjct: 506 TLMNAYCEEGNINKLHELL 524



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 146/316 (46%), Gaps = 23/316 (7%)

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANAGRWESARIVLKEME 397
           + +L+  V    + DA FV+ +M+   + P   TY SLL +       W+    V  +++
Sbjct: 87  DQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWD----VYNDIK 142

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            S    ++   S I+ G   +  ++     L++       P    +N ++  + K     
Sbjct: 143 DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLAD 202

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM- 516
            A + F  ML  GI PDT ++N LI      G  + A EL  +M+++G  P   TY I+ 
Sbjct: 203 VAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVA 262

Query: 517 --INLLGEQE-RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
              +LLG      E ++++L +   +GL P++VTYT L+  + Q G  ++A+        
Sbjct: 263 KGFHLLGLMSGAREIIQKMLTD---EGLKPDLVTYTVLICGHCQMGNIEEALR------- 312

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                 R + + G + + +  + L+++  +  +  EA  +L  M+ N L+PD+VTY+ L+
Sbjct: 313 ----LRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILI 368

Query: 634 KALIRVDKFHKVFSSY 649
             L +  K  +    Y
Sbjct: 369 HGLCKQGKVQQAIQLY 384


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 204/447 (45%), Gaps = 14/447 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +++     ++L+      +KM   G   D   ++++I++L R +++  ++L  + ++
Sbjct: 157 YNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL--MLED 214

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  D +    ++ G+ + GD   A+R        G S    +   ++      GR
Sbjct: 215 MPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274

Query: 316 TIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             +A    +E+  + G  P    +N L+ G  K G++K A  ++  M + G  PD +TY+
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I      G  + A   L +M      PN+  Y+ +++      + +   ++ + + S 
Sbjct: 335 SVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   +N +I           AM  F+ M S+G EPD  T+N LID     G+ D A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             + ++M+  G      TYN +I+   +  +  + + +   M   G+  N VTY TL+D 
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDG 514

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             +S R +DA +    L DQ       M  +G KP     NSL+  F       +A  ++
Sbjct: 515 LCKSRRVEDASQ----LMDQ-------MIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIV 563

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           Q M  NG +PD+VTY TL+  L +  +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGR 590



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 220/482 (45%), Gaps = 28/482 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +++LI AL R+ +L  A L+ +      L P   T+  ++       DL+ AL +  +M 
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMV 251

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           + G     ++ ++++    +  +++ +L  +Q++  +   D    D    N ++ G  KA
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ---DGFFPDQYTFNTLVNGLCKA 308

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A+  + +    G  P   TY +VI+ L   G   EA    +++      P T  Y
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY 368

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+    K   +++A  +   +   G+LPD  T++ LI           A  + +EM  
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              +P+ F Y+ ++     +G+      +LK+M+ SG       YN +ID F K N +  
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   FD M   G+  +++T+NTLID   K  R + A +L ++M   G  P   TYN   +
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN---S 545

Query: 519 LLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           LL    R  D+K+   ++  M + G  P++VTY TL+    ++GR + A + L       
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL------- 598

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM-KENGLKPDVVTYTTLMK 634
               R ++  G+  +  A N +I      ++  EA  + + M ++N   PD V+Y  + +
Sbjct: 599 ----RSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFR 654

Query: 635 AL 636
            L
Sbjct: 655 GL 656



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 165/356 (46%), Gaps = 12/356 (3%)

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
           M    GL P T  Y  ++  L +       E    ++   G+KP    +N L+K   +  
Sbjct: 144 MIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAH 203

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            L+ A  ++ +M   G++PDE T++ ++  Y   G  + A  + ++M       ++   +
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
            I+ G+   G  +     ++EM +  G  PD + +N +++   K   + HA+   D ML 
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           EG +PD  T+N++I    K G    A E  ++M  R   P T TYN +I+ L ++ + E+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              L   + ++G+LP+V T+ +L+              CL      A+  F  MR+ G +
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGL-----------CLTRNHRVAMELFEEMRSKGCE 432

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           P     N LI++     +  EA  +L+ M+ +G    V+TY TL+    + +K  +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 11/273 (4%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+   Y  ++     +G ++  R +L++M+ S  +  +  +  ++  Y           V
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 428 LKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  M    G++PDTHFYN M++     N L     A  +M   GI+PD  T+N LI    
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  +   A  + E+M   G  P   T+  ++    E+   +   R+   M   G   + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +   +V  + + GR +DA+  ++ +S+Q          DG  P     N+L+N   +   
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQ----------DGFFPDQYTFNTLVNGLCKAGH 310

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
              A  ++  M + G  PDV TY +++  L ++
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 11/227 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
           +++L+   C +N  I  A  +   ++ H +  +  + Y+ LI  L +S ++ +A      
Sbjct: 473 YNTLIDGFCKANK-IREAEEIFDEMEVHGVSRN-SVTYNTLIDGLCKSRRVEDASQLMDQ 530

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ + Q+    TYN+L++   R  D++KA +++  M  +G   D + Y  +I  L +  +
Sbjct: 531 MIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
           ++ +   KL + I+   I L     N VI G  +    ++A+  F  M +    +P   +
Sbjct: 591 VEVA--SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVS 648

Query: 303 YAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
           Y  V   L N G  I EA     EL E G  P   +   L +G + +
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 14/386 (3%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYA-AVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           AGD   A+  L      G +    T   A++      G   EA  VF+E+   GL P   
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y AL+ GY   G  +    +  EM R GV P+ +TY+ LI  +   G +E AR +  EM
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            V     N   Y+ ++AG    G+     ++L  M++ G  P    +N+++D +GK   +
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            +A+  F++M + G +P  +T+N LI    +     RA     +M+ERG  P   TY I+
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+    +        +L  M   GL  +  TY  LV              C+EG    A 
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRAL-----------CMEGNMKDAR 303

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F+ M   G++PSN+  + +I  +G +    +A  ++  M++ GL P+  +Y   ++ L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 637 IRVDKFHKVFSSYLFFNIYKMLSYSG 662
            + DK  +  +  L  ++  + S++G
Sbjct: 364 CKDDKCQE--AEALLDDMETIRSFAG 387



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 172/373 (46%), Gaps = 13/373 (3%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S L  L +  +     LD      ++ G  K GD ++A R       +GL+P   TY A+
Sbjct: 20  SALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTAL 79

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +      G+  +  A+FEE++  G++P    YN L+  + + G  + A  +  EM   G+
Sbjct: 80  MHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGI 139

Query: 367 LPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + +  +Y+ LI      G+ W++A++ L  M     +P+   ++ ++ GY   G+     
Sbjct: 140 VRNVVSYNTLIAGLCRHGKLWDAAKL-LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
               +MK++G +P    YN++I  F +   +  A  A   M   G+EP  +T+  LID  
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +     +A E+   M++ G      TY +++  L  +   +D ++L  +M  +G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           V Y  ++  YG+           EG S +A+     MR  GL P++ +    I    +D 
Sbjct: 319 VIYDMMIYGYGR-----------EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 606 RDAEAFAVLQYMK 618
           +  EA A+L  M+
Sbjct: 368 KCQEAEALLDDME 380



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 9/310 (2%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E+ Y+ L+H     G+ EK +  F   +R  + P   TYN LI    R  + E+A +L  
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +M   G   + ++Y+ +I  L R  K+ D++   KL   +  +         N ++ G+ 
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA---KLLDMMRTEGTRPSIITFNLLVDGYG 189

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KAG  S A+ F    +  G  P   TY  +I     +     A     ++KE GL+P   
Sbjct: 190 KAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKV 249

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+  + +  ++  A  +++ ME++G+  D HTY +L+ A    G  + AR + + M
Sbjct: 250 TYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSM 309

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +P++ IY  ++ GY   G   +  +++ EM+  G+ P++  Y + I    K +  
Sbjct: 310 GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKC 369

Query: 457 HHAMAAFDRM 466
             A A  D M
Sbjct: 370 QEAEALLDDM 379


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 193/406 (47%), Gaps = 16/406 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ ++       ++D++  ++L  E+    +E D    N +I G    G  + A+  L  
Sbjct: 3   YNAMVAGYCGAGQLDAA--RRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                  P   TY  ++ A        +A  + +E+++ G  P    YN ++ G  + G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           + DA   +  +   G  P+  +Y++++     A RWE A  ++ EM      PN   ++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           +++    +G  +   +VL+++   G  P++  YN ++  F K   +  AMA  D M+S G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD +++NTL+    + G  D A EL  +++++G  P   +YN +I+ L +  + ++  
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  M ++GL P+++TY+T+     +  R +DAI            AF  ++  G++P+
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR-----------AFGKVQDMGIRPN 346

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +  N++I    + +    A  +  YM  NG  P+  TYT L++ L
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 164/347 (47%), Gaps = 14/347 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A++     +G+   A  +  E+    ++P    YN L++G    G   +A  V+ EM 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R   +PD  TY++L++A      ++ A  +L EM      P+   Y+ ++ G    G   
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              + LK + S G EP+T  YN+++           A      M  +G  P+ +T+N LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               + G  + A E+ E++ + G  P + +YN +++   +Q++ +     L  M ++G  
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++V+Y TL+    +SG  D A+E L  L D+           G  P  ++ N++I+   
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDK-----------GCAPVLISYNTVIDGLT 288

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +  +  EA  +L  M   GL+PD++TY+T+   L R D+      ++
Sbjct: 289 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 335



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 171/384 (44%), Gaps = 14/384 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G+  AG    A R +     + + P   TY  +I  L   GRT  A AV +E+  
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
               P    Y  LL+   K    K A  ++ EM   G  PD  TY+++++     GR + 
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   LK +     +PN+  Y+ +L G      W+   +++ EM   G  P+   +N++I 
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   +  A+   +++   G  P+++++N L+    K  + D+A    + M  RG +P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              +YN ++  L      +    LL  ++ +G  P +++Y T++D   ++G+  +A+E L
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                        M + GL+P  +  +++      + R  +A      +++ G++P+ V 
Sbjct: 301 NE-----------MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVL 349

Query: 629 YTTLMKALIRVDKFHKVFSSYLFF 652
           Y  ++  L +  + H     + + 
Sbjct: 350 YNAIILGLCKRRETHSAIDLFAYM 373



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/449 (22%), Positives = 185/449 (41%), Gaps = 41/449 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           +++++   C +   +D A  +V+ +      Y+Y  L   L    GR+           R
Sbjct: 3   YNAMVAGYCGA-GQLDAARRLVAEMPVEPDAYTYNTLIRGLC-GRGRTANALAVLDEMLR 60

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R  P  +TY  L+ A  +    ++A+ L+ +MR  G   D + Y++V+           
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN---------- 110

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
                                      G  + G    A+ FL      G  P T +Y  V
Sbjct: 111 ---------------------------GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 143

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L  + R  +AE +  E+ + G  P    +N L+    + G ++ A  V+ ++ + G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  +Y+ L+ A+    + + A   L  M      P+   Y+ +L      GE     +
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L ++K  G  P    YN +ID   K      A+   + M+S+G++PD IT++T+     
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  R + A   F ++Q+ G  P T  YN +I  L ++        L   M   G +PN  
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           TYT L++     G   +A + L+ L  +A
Sbjct: 384 TYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 173/417 (41%), Gaps = 25/417 (5%)

Query: 75  LSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLK 134
           + ++   Y +  L+  L       +A+ALA     L R         R VP  + +++L 
Sbjct: 26  MPVEPDAYTYNTLIRGLC--GRGRTANALAVLDEMLRR---------RCVPDVVTYTILL 74

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQ 189
                 S    A  ++  ++    C    + Y+++++ + +  ++ +A      L S   
Sbjct: 75  EATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGC 133

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
               ++YN ++      +  E A  LM +M Q G   + + ++++I  L R   ++ +L 
Sbjct: 134 EPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPAL- 192

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            ++ ++I       +    N ++  F K     KAM FL +    G  P   +Y  ++TA
Sbjct: 193 -EVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  SG    A  +  +LK+ G  P   +YN ++ G  K G  K+A  +++EM   G+ PD
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TYS +        R E A     +++    +PN+ +Y+ I+ G   R E      +  
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 371

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
            M  +G  P+   Y ++I+       +  A    D + S   E        L+D H 
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGE------EILLDVHL 422


>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
 gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g51965, mitochondrial; Flags: Precursor
 gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
           Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
           thaliana]
 gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
          Length = 650

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 240/543 (44%), Gaps = 28/543 (5%)

Query: 98  ESASALASSPSSLNRVEF-KLAES---YRAVPAPLWHSLLKNLCSSN--SSIDLAYAVVS 151
           E++  L S  S L  VEF KL  S   Y      L++ ++  L  SN     D   +++ 
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILD 160

Query: 152 WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDL 209
            + K N+  +   + +ILI   G +E L     L ++   ++   TY  L+ A  R+ D 
Sbjct: 161 SMVKSNVHGNISTV-NILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDY 219

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
            KA ++  ++R+ G+  D   Y++++ +L +  K       +++++++      D     
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKA-----CQVFEDMKKRHCRRDEYTYT 274

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I    + G   +A+         GL+     Y  ++  L+      +A  VF  + E+
Sbjct: 275 IMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P    Y+ LL   V  G L   + VV   E S     +  YS L+   +  G    A
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVV---EISKRYMTQGIYSYLVRTLSKLGHVSEA 391

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +  +M     K     Y  +L      G+     ++L ++   GV  DT  YN +   
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            GK   + H    F++M  +G  PD  T+N LI    + G  D A  +FEE++     P 
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +YN +IN LG+    ++       M+ +GL P+VVTY+TL++ +G++ R +       
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE------- 564

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                A + F  M   G +P+ +  N L++   ++ R AEA  +   MK+ GL PD +TY
Sbjct: 565 ----MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620

Query: 630 TTL 632
           T L
Sbjct: 621 TVL 623



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 206/463 (44%), Gaps = 31/463 (6%)

Query: 193 PLTYNALISACARN---DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           P  YN +I   +R+   D  ++  +++  M +   H +    +++I     T  +   L 
Sbjct: 133 PFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL- 191

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +L K+ +   ++++      ++  + ++ D SKA       +  G       Y  ++ A
Sbjct: 192 -RLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+   +  +   VFE++K+   +     Y  +++   ++G   +A  + +EM   G+  +
Sbjct: 248 LAKDEKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR---TFQ 426
              Y+ L+   A     + A  V   M  +  +PN + YS +L      G+  R     +
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + K   + G+      Y+ ++ T  K   +  A   F  M S  ++ +  ++ ++++   
Sbjct: 365 ISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+   A E+  ++ E+G    T  YN + + LG+ ++   +  L   M+  G  P++ 
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L+  +G+ G  D+AI   E L           R+D  KP  ++ NSLIN  G++  
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELE----------RSD-CKPDIISYNSLINCLGKNGD 527

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             EA    + M+E GL PDVVTY+TLM+   + ++    +S +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 188/422 (44%), Gaps = 51/422 (12%)

Query: 268 LNDVIVGFAKAGDASKAMR-FLGMAQGVG-LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
           LN V+ GF ++G   KAM  F  M +    + P   TY  ++     + R  EA  +FE 
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174

Query: 326 LKESG-LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           +K+ G  +P    Y+ L+  Y K G + +   ++ EMER G+  D   YS LI A+   G
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             E+ R +  EM      PN   YS ++ G    G W+   ++LK+M + GV PD   Y 
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           V+ D   K      A+   D M+ +G EP T+T+N +++   K  R D A  + E M ++
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 505 GYFPCTTTYNI-------------------------------------MINLLGEQERWE 527
           G  P   TYN                                      +I  L ++ R  
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           D  R+  +M   GL  N+VTY  L++ Y  + +  +A++    L   AV +       G 
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK----LWKYAVES-------GF 463

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            P+++  + +IN   + Q  + A  +   MK++G++P V+ Y  LM +L R D   +  S
Sbjct: 464 SPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARS 523

Query: 648 SY 649
            +
Sbjct: 524 LF 525



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 212/502 (42%), Gaps = 66/502 (13%)

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLN 269
           A +++S M + G+  +  N +LV++   R+ + D   SL  ++ +  +C  +  D    N
Sbjct: 96  AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC--VVPDCVTYN 153

Query: 270 DVIVGFAKAGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            ++ GF KA   ++A + F  M +G    P   TY+ +I     SG   E   + EE++ 
Sbjct: 154 TLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER 213

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GLK     Y++L+  +   G ++    +  EM R  V P+  TYS L+      GRW  
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LK+M     +P+   Y+ +  G    G      +VL  M   G EP T  YNV+++
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF- 507
              K + +  A    + M+ +G +PD +T+NTL+      G+   A +L++ +    +  
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393

Query: 508 -PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   T N +I  L ++ R  D  R+  +M   GL  N+VTY  L++ Y  + +  +A++
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C   +   A   F  M+  G++P+ +  N+L+ +  
Sbjct: 454 LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLC 513

Query: 603 EDQRDAEAFAVLQYMKE--------------NG---------------------LKPDVV 627
            +    +A ++ Q M+               +G                     L PD V
Sbjct: 514 REDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAV 573

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           T++ L+    ++    +    Y
Sbjct: 574 TFSILINRFSKLGMLDEAMGLY 595



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/554 (22%), Positives = 240/554 (43%), Gaps = 58/554 (10%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ- 189
           +LK  C S    D A ++ S ++++  C   + + Y+ L++   ++++L EA +L +   
Sbjct: 118 VLKGFCRSGQC-DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMK 176

Query: 190 -----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
                R   +TY+ LI    ++ ++ + L L+ +M ++G   D   YS +I +      I
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           ++   ++L+ E+   K+  +    + ++ G  + G   +A   L      G+ P    Y 
Sbjct: 237 ETG--RELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +   L  +GR  +A  V + + + G +P T  YN ++ G  K   + DA  VV  M + 
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEM--EVSHAKPNSFIYSRILAGYRDRGEW- 421
           G  PD  TY+ L+     AG+   A  + K +  E  H KP+ F  + ++ G    G   
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 422 -------------------------------QRTFQVLKEMK---SSGVEPDTHFYNVMI 447
                                          ++  + LK  K    SG  P++  Y+VMI
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMI 474

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +   K   L  A   F +M   GI P  I +N L+    +    ++A  LF+EM+   + 
Sbjct: 475 NGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHN 534

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               ++NI+I+   +    +  K LL  M    L+P+ VT++ L++ + + G  D+A+  
Sbjct: 535 VDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAM-- 592

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
             GL ++ V+   V       P  +  +SL+  +G      +  ++L  M +  +  D  
Sbjct: 593 --GLYEKMVSCGHV-------PGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSK 643

Query: 628 TYTTLMKALIRVDK 641
             +T++  L  + +
Sbjct: 644 LTSTILACLCHMSR 657



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 162/351 (46%), Gaps = 16/351 (4%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P+  + +A+  +  N+     A +V   + + G        N +LKG+ + G    A  +
Sbjct: 75  PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSL 134

Query: 358 VSEMERS--GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV-SHAKPNSFIYSRILAG 414
            S+M+R+   V+PD  TY+ L++ +  A R   AR++ + M+     +PN   YS ++  
Sbjct: 135 FSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDC 194

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y   GE      +L+EM+  G++ D   Y+ +I  F     +      FD ML   + P+
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +T++ L+    + GR+  A E+ ++M  RG  P    Y ++ + L +  R  D  ++L 
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +G  P  +TY  +V+   +  R DDA   +E           +M   G KP  +  
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVE-----------MMVKKGKKPDAVTY 363

Query: 595 NSLINAFGEDQRDAEAFAVLQYM--KENGLKPDVVTYTTLMKALIRVDKFH 643
           N+L+       +  EA  + + +  ++  +KPDV T   L++ L +  + H
Sbjct: 364 NTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 143/350 (40%), Gaps = 84/350 (24%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN-----------------SFIYS- 409
           P E   S LID    A ++++   V  +M  +   P                  SF +S 
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 410 -----------------RILAGYRDRGEWQRTFQVLKEMKSS--GVEPDTHFYNVMIDTF 450
                             +L G+   G+  +   +  +MK +   V PD   YN +++ F
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 451 GKYNCLHHAMAAFDRMLSEG-IEPDTITWNTLIDCHFK---------------------- 487
            K   L  A   F+ M   G   P+ +T++ LIDC+ K                      
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 488 -----------CGRYD--RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
                      CG  D     ELF+EM  R   P   TY+ ++  LG   RW +   +L 
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M A+G+ P+VV YT L D   ++GR  DAI+ L+           +M   G +P  L  
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD-----------LMVQKGEEPGTLTY 328

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           N ++N   ++ R  +AF V++ M + G KPD VTY TL+K L    K H+
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHE 378



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 174/381 (45%), Gaps = 9/381 (2%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++L   L ++ +  +A      ++ + +    LTYN +++   + D ++ A  ++  M 
Sbjct: 293 YTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMV 352

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL--NDVIVGFAKA 278
           + G   D + Y+ +++ L    KI  ++   L+K +  +K  +   +   N++I G  K 
Sbjct: 353 KKGKKPDAVTYNTLLKGLCGAGKIHEAM--DLWKLLLSEKFHVKPDVFTCNNLIQGLCKE 410

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A R       +GL     TY  +I     + + IEA  +++   ESG  P +  Y
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + ++ G  KM  L  A  +  +M+ SG+ P    Y+ L+ +       E AR + +EM  
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
            +   +   ++ I+ G    G+ +   ++L EM    + PD   ++++I+ F K   L  
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDE 590

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           AM  +++M+S G  P  + +++L+  +   G  ++   L  +M ++     +   + ++ 
Sbjct: 591 AMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILA 650

Query: 519 LLGEQERWEDVKRLLGNMRAQ 539
            L    R  DV+++L     Q
Sbjct: 651 CLCHMSRNLDVEKILPKFSQQ 671


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 208/456 (45%), Gaps = 20/456 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +N L+++ A+       L+L  +M   G   +     ++I S    N++    S+L K+ 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       + D      +I G    G   +A+       G G  P   TY  +I  L   
Sbjct: 124 KLGH----QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G T  A  +   + +   +P   AYN ++    K   + +A  + SEM   G+ PD  TY
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI A  N   W+    +L EM  S   P+   ++ ++      G+      V+ +M  
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GVEP+   Y  ++D     + +  A+  FD M+ +G  P+ I++NTLI+ + K  R D+
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF EM  +   P T TY+ +I+ L   ER +D   L   M A   +PN+VTY  L+D
Sbjct: 360 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 419

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++    +A+  L+ +    ++         ++ +N+A++ +  A GE +   + F+ 
Sbjct: 420 YLCKNRYLAEAMALLKAIEGSNLDP-------DIQVNNIAIDGMCRA-GELEAARDLFSN 471

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
           L      GL+PDV TY+ ++  L R   +D+  K+F
Sbjct: 472 LS---SKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++T+++         ++  ++   G+ P     + L+  +  +  +  A  V
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G  PD  T++ LI      G+   A  +  +M     +P+   Y  ++ G   
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      ++L  M     +P+   YN +ID+  K   +  A   F  M+++GI PD  T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N+LI        +     L  EM +    P   ++N +++ L ++ +  +   ++  M 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ PNVVTYT L+D +           CL    D+AV  F  M   G  P+ ++ N+L
Sbjct: 299 QRGVEPNVVTYTALMDGH-----------CLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + + QR  +A  +   M    L PD VTY+TL+  L  V++     + +
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 399



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 203/484 (41%), Gaps = 21/484 (4%)

Query: 123 AVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL-LYSILIHALGRSEKL 179
            +P  ++  H L+ + C  N  +  A++V++ + K  L +  +   ++ LI  +    K+
Sbjct: 91  GIPPNIYTLHILINSFCHLNR-VGFAFSVLAKILK--LGHQPDTATFTTLIRGIYVEGKI 147

Query: 180 YEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
            EA      ++ +  R   +TY  LI+   +  +   A+ L+  M Q     +   Y+ +
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           I SL +  ++  +    L+ E+    I  D    N +I       +       L      
Sbjct: 208 IDSLCKDRQVTEAF--NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            + P   ++  V+ AL   G+  EA  V +++ + G++P    Y AL+ G+  +  + +A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             V   M   G +P+  +Y+ LI+ Y    R + A  +  EM      P++  YS ++ G
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                  Q    +  EM +    P+   Y +++D   K   L  AMA    +    ++PD
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
               N  ID   + G  + A +LF  +  +G  P   TY+IMIN L  +   ++  +L  
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------FRVMRTDG 586
            M   G   N   Y T+   + ++     AI+ L+ +  +  +A         +++  DG
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565

Query: 587 LKPS 590
           L  S
Sbjct: 566 LDQS 569



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 151/374 (40%), Gaps = 39/374 (10%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN +I +  ++  + +A NL S+M   G   D   Y+ +I +L   N  +   +  L  E
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC--NLCEWKHVATLLNE 261

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +   KI  D    N V+    K G  ++A   +      G+ P   TY A++        
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  VF+ +   G  P   +YN L+ GY K+  +  A ++  EM R  ++PD  TYS 
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY--RDR--------------- 418
           LI    +  R + A  +  EM      PN   Y RIL  Y  ++R               
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTY-RILLDYLCKNRYLAEAMALLKAIEGS 440

Query: 419 -------------------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
                              GE +    +   + S G++PD   Y++MI+   +   L  A
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M   G   +   +NT+     +     RA +L +EM  RG+    +T  + + +
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560

Query: 520 LGEQERWEDVKRLL 533
           L +    + +K++L
Sbjct: 561 LSDDGLDQSLKQIL 574



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 7/242 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + Y+ LI+   + +++ +A  L     RQ L P  +TY+ LI      + L+ A+
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L  +M       + + Y +++  L +   +  ++   L K IE   ++ D Q+ N  I 
Sbjct: 397 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM--ALLKAIEGSNLDPDIQVNNIAID 454

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  +AG+   A          GL P   TY+ +I  L   G   EA  +F E+ E+G   
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN + +G+++      A  ++ EM   G   D  T +L +   ++ G  +S + +L
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574

Query: 394 KE 395
           +E
Sbjct: 575 RE 576


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 231/531 (43%), Gaps = 56/531 (10%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI AL ++  + EA    L  + + ++P  +T++++I+   +   L+KA      M+
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G + + + Y  +I    +    D++L  ++Y ++ C+ ++++  +++ ++ G  + G 
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAAL--EVYHDMLCEGVKVNKFIVDSLVNGLRQNGK 499

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM     A G GLS     Y  +I  L  +G    A    +EL +  + P    YN 
Sbjct: 500 IEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNV 559

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +     +G  K+A+  ++EM   G+ PD+ TY+ +I ++   G    A  +L EM++S 
Sbjct: 560 FINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS 619

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP---------------------- 438
            KPN   Y+ ++AG    G  ++   +L EM S+G  P                      
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679

Query: 439 -------------DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
                        D   YN ++     +     A    + ML  GI PDTIT+N LI  H
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K    D A   + +M  +   P   T+N ++  L    R  +   +L  M   GL PN 
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799

Query: 546 VTYTTLVDIYG-QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           +TY  L   +G QS +             +A+  +  M   G  P     N+LI+ F + 
Sbjct: 800 LTYDILATGHGKQSNKV------------EAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
               +A  + + M++ G+ P   TY  L+     + +  K  ++Y F  IY
Sbjct: 848 GMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTY-FTEIY 897



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 236/582 (40%), Gaps = 73/582 (12%)

Query: 122 RAVP--APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
           R VP      ++LL  LC  N  +D A A+     +    ++ +++ ++ LI    R   
Sbjct: 129 RGVPFDGVTVNTLLAGLCR-NGQVDAAAALA---DRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 179 LYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
              A  ++ R     L      YN L++   R   ++ A  ++  M++ G   +   Y+ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
            I    RT  ++ +    LY+ +  + + LD   L+ ++ G  + G  S+A         
Sbjct: 245 FIVYYCRTKGVEEAF--DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           VG +P   TY  +I +L+ +GR  E  ++  E+   G+      Y AL+    K G   +
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
            +  +       + P+  TY++LIDA   A   + A  VL EME     PN   +S ++ 
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G+  RG   +  +  + MK  G+ P+   Y  +ID F K+     A+  +  ML EG++ 
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKV 482

Query: 474 -----------------------------------DTITWNTLIDCHFKCGRYDRAEELF 498
                                              D + + TLID  FK G    A +  
Sbjct: 483 NKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFG 542

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +E+ +R   P    YN+ IN L    ++++ K  L  MR  GL P+  TY T++  + + 
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602

Query: 559 GRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLAL 594
           G    A++ L                         G  ++A      M + G  PS+L  
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             ++ A  + +R      + ++M   GL  D+  Y TL++ L
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVL 704



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 224/544 (41%), Gaps = 72/544 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR-QRLTP---LTYNALISACARNDDLEKALNLMSKMRQ 221
           Y+IL+ AL  S+  +   +L++  +R  P   +T N L++   RN  ++ A  L    R 
Sbjct: 106 YNILLAAL--SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RG 161

Query: 222 DGYHC-DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            G H  D I ++ +I    R     ++L   +   +    + +D    N ++ GF +AG 
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAAL--SVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 281 ASKAMRFLGMAQGVGLSPKTATY-----------------------------------AA 305
              A   L M +  G+ P  ATY                                   +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   GR  EA A+F E+ + G  P    Y  L+    K G  K+   ++ EM   G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V+ D  TY+ L+D     G+ +  +  L+     +  PN   Y+ ++             
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDC 484
           QVL EM+   + P+   ++ +I+ F K   L  A   + RM+ E GI P+ +T+ TLID 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA-TEYKRMMKERGINPNVVTYGTLIDG 458

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
            FK    D A E++ +M   G        + ++N L +  + E+   L  +    GL  +
Sbjct: 459 FFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLD 518

Query: 545 VVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFR 580
            V YTTL+D   ++G    A +                        C+ G   +A +   
Sbjct: 519 HVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLT 578

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            MR  GLKP     N++I +       A+A  +L  MK + +KP+++TY TL+  L    
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 641 KFHK 644
              K
Sbjct: 639 AVEK 642



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 160/343 (46%), Gaps = 19/343 (5%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  Y  ++ ALS+      A AV  E+ + G+       N LL G  + G +  A  +
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 358 VSEMERSGVLP--DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
               +R G +   D   ++ LI  Y   G   +A  V   M       +   Y+ ++AG+
Sbjct: 158 A---DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+      VL  MK +GV+P+   Y   I  + +   +  A   ++ M+  G+  D 
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +T + L+    + GR+  A  LF EM + G  P   TY  +I+ L +  R +++  LLG 
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M ++G++ ++VTYT L+D  G+ G+           +D+  +  R   +D L P+ +   
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGK-----------TDEVKDTLRFALSDNLSPNGVTYT 383

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            LI+A  +     EA  VL  M+E  + P+VVT+++++   ++
Sbjct: 384 VLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 130/320 (40%), Gaps = 50/320 (15%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P T AYN LL       +   A  V++EM + GV  D  T + L+      G+ ++A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-- 154

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
                                A   DRG       V+              +N +I  + 
Sbjct: 155 ---------------------AALADRGGGIHALDVIG-------------WNTLIAGYC 180

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +      A++  DRM ++G+  D + +NTL+    + G+ D A  + + M+E G  P   
Sbjct: 181 RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVA 240

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY   I      +  E+   L   M   G+L +VVT + LV    + GRF +A       
Sbjct: 241 TYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL---- 296

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                  FR M   G  P+++   +LI++  +  R  E  ++L  M   G+  D+VTYT 
Sbjct: 297 -------FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTA 349

Query: 632 LMKALIRVDKFHKVFSSYLF 651
           LM  L +  K  +V  +  F
Sbjct: 350 LMDWLGKQGKTDEVKDTLRF 369



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 6/225 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILI-HALGRSEKLY 180
           P+ L H  +   CS +  +D+   +  W+    L      Y  L  +L  H + R   + 
Sbjct: 657 PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVV 716

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
              +L        +T+NALI    ++  L+ A    ++M       +   ++ ++  L  
Sbjct: 717 LEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLES 776

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             +I  +    +  E+E   +E +    + +  G  K  +  +AMR      G G  PK 
Sbjct: 777 VGRIGEA--GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
           +TY A+I+  + +G   +A+ +F+++++ G+ P +  Y+ L+ G+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 176/372 (47%), Gaps = 12/372 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I GF KA    +A+  LG  +  G++P   T+ ++I  L     T +A  +F ++ +  
Sbjct: 58  LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           +KP    Y  ++    K+  L  A      M +SG LPD+ TY++L+ +   A +WE   
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +EM      P    Y+ ++ GY   G   +   +++ +K +G  P    Y+ +ID  
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K++    A   F+  ++ G   D I + + I    K G+ D A+ +  +M E G  P  
Sbjct: 238 CKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDP 295

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            +YN++I  L +  R  + K L+     +  +P V   T LVD   +S R ++A   LE 
Sbjct: 296 VSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE- 354

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
                    R++ T    PS +  +++I+   +  R  +A+ VLQ M+  G  PDVVTYT
Sbjct: 355 ---------RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYT 405

Query: 631 TLMKALIRVDKF 642
            ++ A  +V + 
Sbjct: 406 AIIDAFCKVGRL 417



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 201/450 (44%), Gaps = 16/450 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    TY  LI    + + + +A+NL+ +M+  G     + +  +I+ L   N  D +L 
Sbjct: 49  RPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL- 107

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +++ ++   K++ D  L   VI    K      A  +       G  P   TY  ++ +
Sbjct: 108 -QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHS 166

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  + +  +   +FEE+   G  P    Y  ++ GY K G +  A  ++  ++ +G  P 
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPS 226

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              YS LID      R + AR  L EM     + +  +Y+  ++G    G+      V  
Sbjct: 227 GSLYSTLIDGLCKHDRHDEAR-ELFEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHV 284

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +M  +G  PD   YNV+I +  K N +  A    D+ +     P       L+D   K  
Sbjct: 285 KMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR 344

Query: 490 RYDRAEELFEEMQERG-YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           R + A  + E M E G   P   TY+ +I+ L + +R +D   +L  MR  G +P+VVTY
Sbjct: 345 RVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTY 404

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T ++D + + GR D+A E            F+ M   G     +A N LI  +    +  
Sbjct: 405 TAIIDAFCKVGRLDEARE-----------LFQRMHERGCALDVVAYNILIRGYCRAAKVD 453

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           EA A+++ M   G++P+VV+ +T++  L +
Sbjct: 454 EAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 168/370 (45%), Gaps = 5/370 (1%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  +I    + + L+ A +   +M Q G   D + Y++++ SL +  K +     ++++E
Sbjct: 125 YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG--HQIFEE 182

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +       +      V+ G+ KAG   +A+  +   +G G SP  + Y+ +I  L    R
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +FE    +G       Y + + G  K G L +A+ V  +M  +G  PD  +Y++
Sbjct: 243 HDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 300

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I +     R   A+ ++ +       P   + + ++ G       +    +L+ M  +G
Sbjct: 301 IIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETG 360

Query: 436 VE-PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              P    Y+ +ID   K + L  A     +M   G  PD +T+  +ID   K GR D A
Sbjct: 361 DRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 420

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF+ M ERG       YNI+I       + ++   ++  M  +G+ PNVV+ +T+VD 
Sbjct: 421 RELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDG 480

Query: 555 YGQSGRFDDA 564
             +  R ++A
Sbjct: 481 LCKESRVEEA 490



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 22/331 (6%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +  T   N+LL+ +V  G  ++A  V  +   +   PD+ TY  LI  +  A +   A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L EM+ +   P    +  ++    +     +  Q+  +M    V+PD   Y V+I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K N L  A + F+RM+  G  PD +T+  L+   FK  ++++  ++FEEM  +G+ P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TY  ++N   +  R +    L+  ++  G  P+   Y+TL+D   +  R D+A E   
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251

Query: 567 -------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                              C  G  D+A      M   G  P  ++ N +I +  +D R 
Sbjct: 252 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           +EA  ++    E    P V   T L+  L +
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCK 342



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 13/280 (4%)

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           R G   + +T + L++ + N G    A  V K+  V+  +P+ F Y  ++ G+    +  
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   +L EMK++G+ P    +  +I    + N    A+  F +M+   ++PD   +  +I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K  + D A   FE M + G  P   TY ++++ L +  +WE   ++   M ++G  
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P +VTY T+V+ Y ++GR            DQA++  R ++  G  PS    ++LI+   
Sbjct: 190 PELVTYATVVNGYCKAGRI-----------DQALSLMRRLKGTGRSPSGSLYSTLIDGLC 238

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +  R  EA  + +     G   DV+ YT+ +  L +  K 
Sbjct: 239 KHDRHDEARELFEMAA--GDVQDVIVYTSFISGLCKAGKL 276



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G + +T T N+L++     G +  A  +F++     + P   TY  +I    + E+    
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             LLG M+A G+ P +VT+ +L+              C    +D+A+  F  M    +KP
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKL-----------CELNFTDKALQIFHQMIDMKVKP 120

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF---HKVF 646
                  +I    +  +   A +  + M ++G  PD VTYT L+ +L +  K+   H++F
Sbjct: 121 DAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIF 180

Query: 647 SSYL 650
              L
Sbjct: 181 EEML 184


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 211/489 (43%), Gaps = 61/489 (12%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           +KA+     MR      D   Y++++  L + N +  +L   +Y  +       +    +
Sbjct: 143 DKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLAL--TVYTRMMKLNCLPNVATFS 200

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K+G+   A+         G+ P   TY  VI+ L  S R  +A  +F+++K+S
Sbjct: 201 ILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDS 260

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P     NALL G+  +  + +A  ++   E+ G + D   YS LI     A R+E  
Sbjct: 261 GVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDV 320

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           +++ ++M   + KP+ ++Y+ ++ G  + G+ +   ++L EM  SGV PDT  YNV+I  
Sbjct: 321 QLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKG 380

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F     L  A +    +      P+  T++ LI    + G    A+E+F EM++ G +P 
Sbjct: 381 FCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPS 440

Query: 510 TTTYNIMINLLGEQERWEDVK--------------------------------------- 530
             T+N +I+ L +  + E                                          
Sbjct: 441 AVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLC 500

Query: 531 ---------RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
                    R+L  +   G  P + TY  LV+ + + G F+ A +            FR 
Sbjct: 501 DSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYK-----------LFRE 549

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M+  GL P  +   +LIN     QR+ +A+ V   M++NG  PD   Y T+M  + R  +
Sbjct: 550 MQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRME 609

Query: 642 FHKVFSSYL 650
             + FS +L
Sbjct: 610 LPRAFSLWL 618



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 196/405 (48%), Gaps = 24/405 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR- 190
           L+  LC S +  D  +      Q+  L  ++   Y ++I  L RS+++ +A+ L  + + 
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFT--YCVVISGLCRSKRVDDAYRLFDKMKD 259

Query: 191 --LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
             + P  +T NAL++     D +++A +L+    +DGY  D   YS +I+ L R  + + 
Sbjct: 260 SGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYED 319

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
             +Q LY+++  D ++ D  L   ++ G A+AG    A+  L      G+ P T  Y  +
Sbjct: 320 --VQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I    + G   EA ++  E+      P  K Y+ L+ G  + G  +DA+ + +EME+ G 
Sbjct: 378 IKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGC 437

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI--------------YSRIL 412
            P   T++ LID     G+ E A ++  +ME+    P+ F+                +++
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR-NPSLFLRLSQGPSHVLDSASLQKMV 496

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
               D G   + +++L ++  SG  P  + YN++++ F K    + A   F  M  +G+ 
Sbjct: 497 EQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLS 556

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
           PDT+T+ TLI+   +  R + A ++F++M++ G  P    Y  M+
Sbjct: 557 PDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMM 601



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 171/451 (37%), Gaps = 75/451 (16%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I  + K G   KAM   G  +    +P   TY  ++  L      + A  V+  + +  
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN 191

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    ++ L+ G  K G +KDA  +  EM + G+LPD  TY ++I     + R + A 
Sbjct: 192 CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAY 251

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG--------------- 435
            +  +M+ S   P+    + +L G+         F +L+  +  G               
Sbjct: 252 RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGL 311

Query: 436 --------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                               V+PD + Y +M+    +   +  A+   + M   G+ PDT
Sbjct: 312 FRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDT 371

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           + +N LI      G    A  L  E+     FP   TY+I+I+ +       D + +   
Sbjct: 372 VCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNE 431

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDA------------------------------- 564
           M   G  P+ VT+ +L+D   ++G+ + A                               
Sbjct: 432 MEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSAS 491

Query: 565 ----IE--CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
               +E  C  GL  +A      +   G  P     N L+N F +      A+ + + M+
Sbjct: 492 LQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ 551

Query: 619 ENGLKPDVVTYTTLMKALIRVDK---FHKVF 646
             GL PD VTY TL+  L+R  +    +KVF
Sbjct: 552 FKGLSPDTVTYGTLINGLLRFQREEDAYKVF 582



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 11/316 (3%)

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            E LK  G+K    A+  L+K Y+KMG    A      M      PD +TY++++D    
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
                 A  V   M   +  PN   +S ++ G    G  +    +  EM   G+ PD   
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y V+I    +   +  A   FD+M   G+ PD +T N L++      R D A  L    +
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           + GY      Y+ +I  L   +R+EDV+ L   M    + P+V  YT ++    ++G+  
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           DA+E L  +++            G+ P  +  N LI  F +    +EA ++   +  +  
Sbjct: 354 DALELLNEMTES-----------GVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDC 402

Query: 623 KPDVVTYTTLMKALIR 638
            P+V TY+ L+  + R
Sbjct: 403 FPNVKTYSILISGMCR 418



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 155/363 (42%), Gaps = 16/363 (4%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+      +  +I      G T +A   F  +++    P    YN +L   ++  +L  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             V + M +   LP+  T+S+LID    +G  + A  +  EM      P++F Y  +++G
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     +++  +MK SGV PD    N +++ F   + +  A +       +G   D
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
              ++ LI   F+  RY+  + L+ +M E    P    Y IM+  L E  +  D   LL 
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLN 360

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G++P+ V Y  L+  +   G   +A      +S    + F  ++T  +  S +  
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRH--DCFPNVKTYSILISGMCR 418

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
           N L        RDA+   +   M++ G  P  VT+ +L+  L +  +  K   ++L F  
Sbjct: 419 NGL-------TRDAQ--EIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEK---AHLLF-- 464

Query: 655 YKM 657
           YKM
Sbjct: 465 YKM 467



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 11/267 (4%)

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           L+ D   N    E     L+ ++    K ++  +  ++  Y   G   +  +    M+  
Sbjct: 96  LITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDF 155

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
              PD + YN+++D   + N L  A+  + RM+     P+  T++ LID   K G    A
Sbjct: 156 DCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDA 215

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF+EM +RG  P   TY ++I+ L   +R +D  RL   M+  G+ P+ VT   L++ 
Sbjct: 216 LHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           +           C+    D+A +  R+   DG        + LI      +R  +   + 
Sbjct: 276 F-----------CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLY 324

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
           + M E+ +KPDV  YT +MK L    K
Sbjct: 325 RKMIEDNVKPDVYLYTIMMKGLAEAGK 351



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 20/281 (7%)

Query: 165 LYSILIHALGRSEKLYEAF-LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSKM 219
           LY+I++  L  + K+ +A  LL++     + P  + YN LI        L +A +L  ++
Sbjct: 338 LYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEI 397

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            +     +   YS++I  + R      +  Q+++ E+E           N +I G  K G
Sbjct: 398 SRHDCFPNVKTYSILISGMCRNGLTRDA--QEIFNEMEKLGCYPSAVTFNSLIDGLCKTG 455

Query: 280 DASKAMR-------------FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
              KA               FL ++QG      +A+   ++  L +SG   +A  +  +L
Sbjct: 456 QLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQL 515

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            +SG  P    YN L+ G+ K+G    A  +  EM+  G+ PD  TY  LI+      R 
Sbjct: 516 ADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQRE 575

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           E A  V  +ME +   P++ +Y  ++     R E  R F +
Sbjct: 576 EDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSL 616


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 218/498 (43%), Gaps = 34/498 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AFLL Q  ++   TP   TY  LI +  +   +E+A  L  +MR
Sbjct: 291 YSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 350

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+ +I +  +  ++  +    ++  +       +      ++ G  KAG+
Sbjct: 351 SVGCSPTVVTYTALIHAYLKAKQVPQA--NDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408

Query: 281 ASKAMRFLGMAQGVG----------------LSPKTATYAAVITALSNSGRTIEAEAVFE 324
            SKA        G                  L+P   TY A++  L  + +   A  + +
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
            +  SG +P    Y+AL+ G+ K G +  A+ V  +M + G LP  HTY+ LID     G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A  VL +M      PN   Y+ ++ G    GE ++  ++L  M+  G  P+   Y 
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +ID  GK   +  ++  F +M  +G  P+ +T+  LI+     G  D+A  L  EM++ 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            +      Y   I   G  + +     +L  M + G +P    Y  L+D + ++GR + A
Sbjct: 649 YWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           +E    L  + +     ++TD     N    SLI A     +  EAF +   M   G  P
Sbjct: 707 ME----LHKEMMEVPSSVKTD-----NDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757

Query: 625 DVVTYTTLMKALIRVDKF 642
           ++  +  L+K L+ V K+
Sbjct: 758 ELSVFVCLIKGLVEVKKW 775



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/578 (21%), Positives = 238/578 (41%), Gaps = 45/578 (7%)

Query: 100 ASALASSPSSLNRVEFKLA-------ESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSW 152
           A+A+A+  +SL R     A       + +   P+ + ++ L  + SS   +DL + V   
Sbjct: 6   AAAVATLRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKE 65

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLE 210
           + +   C           HAL +  +  +A  + +R+  +L  +    +IS        +
Sbjct: 66  MSESGFCMD-RFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFD 124

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +A++ + +MR +    + + Y  ++    +  ++     +++   +  +    +  L N 
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL--GWCKRIINMMMTEGCNPNPSLFNS 182

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE------AEAVFE 324
           ++  +    D + A + L      G  P    Y   I ++    +         AE ++ 
Sbjct: 183 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 242

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+  +             +    +G    A  ++ EM R G +PD  TYS +I    +A 
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           + E A ++ +EM++    P+ + Y+ ++  +   G  ++   + +EM+S G  P    Y 
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM--- 501
            +I  + K   +  A   F RM+  G  P+ +T+  L+D   K G   +A E++ ++   
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 422

Query: 502 ----QERGYFPC---------TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
                   YFPC           TY  +++ L +  + +    LL  M + G  PN + Y
Sbjct: 423 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 482

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L+D + ++G+ D A E            F  M   G  PS     SLI+   +D R  
Sbjct: 483 DALIDGFCKAGKIDSAQE-----------VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            A  VL  M ++   P+VVTYT ++  L R+ +  K  
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 192/426 (45%), Gaps = 27/426 (6%)

Query: 128 LWHSLLKNLCSSNSSIDLAY-AVVSWLQK-HNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           ++H ++   C  N   D+ Y A+V  L K  N+  ++E+   ++  +       Y  F  
Sbjct: 380 IFHRMVDAGCRPN---DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY--FPC 434

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R  L P  +TY AL+    +   ++ A  L+  M   G   + I Y  +I    +  K
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           IDS+  Q+++ ++ +C  +         +I    K G    AM+ L        +P   T
Sbjct: 495 IDSA--QEVFLQMTKCGYLP-SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y A+I  L   G + +A  +   ++E G  P    Y AL+ G  K G +  +  + ++M 
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMS 611

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE-W 421
           R G  P+  TY +LI+    AG  + AR++L EM+ ++       + + L GYR   + +
Sbjct: 612 RKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY-------WPKYLQGYRCAIQGF 664

Query: 422 QRTF----QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS--EGIEPDT 475
            ++F     +L+EM+S G  P    Y ++ID F K   L  AM     M+     ++ D 
Sbjct: 665 SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             + +LI       + + A  L+ EM  RG+ P  + +  +I  L E ++W++  +L   
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 784

Query: 536 MRAQGL 541
           +  +G+
Sbjct: 785 ICHEGV 790


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 234/539 (43%), Gaps = 49/539 (9%)

Query: 104 ASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE 163
           A + + LNR+        R VP P   +LL +L S   ++                    
Sbjct: 47  AEASARLNRL-------LRLVPLPESPALLSSLPSVRDAVS------------------- 80

Query: 164 LLYSILIHALGRSEKLYEAFL-----LSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
             Y+ ++ AL R     +A L     ++   R T ++Y  L+ A        +A+ L+  
Sbjct: 81  --YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M+  G   D + Y  +I+ L     +D ++  +L +E+    IE +  + + ++ G+ KA
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAV--ELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G      +      G G+ P    Y  +I +L   G+  +A  V +++ E GL+P    Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-- 396
           N L+    K G +K+A  + + M   GV  D  TY+ LI   +     + A  +L+EM  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +  +PN   ++ ++ G    G  ++ FQV   M  +G   +   +N++I    + + +
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM   D M S G+EPD+ T++ LI+   K  + DRAE L  +M+  G  P    Y  +
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  L EQ   E  +     M     L +VV Y+T+  I+G   R  D           A 
Sbjct: 437 LAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTM--IHGAC-RLRD--------RKSAE 484

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              + M  +GL P ++  + LIN F        A  VL+ M  +G  PDV  + +L+K 
Sbjct: 485 EFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKG 543



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 175/370 (47%), Gaps = 13/370 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N V+    + G    A  FL         P   +Y  ++ AL    RT +A  +  +++ 
Sbjct: 82  NTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQA 141

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG++P    Y  L++G      +  A  ++ EM  SG+ P+   YS L+  Y  AGRWE 
Sbjct: 142 SGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWEC 201

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
              V +EM     +P+  +Y+ ++      G+ ++  QV+ +M   G+EP+   YNV+I+
Sbjct: 202 VSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLIN 261

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM--QERGY 506
           +  K   +  AM+  + ML +G+  D +T+NTLI         D A  L EEM   E   
Sbjct: 262 SMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMV 321

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   T+N +I+ L +  R     ++   M   G   N+VT+  L+    +  +   A+E
Sbjct: 322 EPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAME 381

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               L D+       M + GL+P +   + LIN F +  +   A ++L  M+ +G++P++
Sbjct: 382 ----LMDE-------MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPEL 430

Query: 627 VTYTTLMKAL 636
           V Y  L+ AL
Sbjct: 431 VHYIPLLAAL 440



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 158/315 (50%), Gaps = 19/315 (6%)

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +YN +L    + G   DA   +  +      P   +Y+ L+ A     R   A  +L++M
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKY 453
           + S  +P+   Y  ++ G  D  +  +  ++L+EM  SG+EP+   Y+ ++  +   G++
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
            C+      F+ M   GIEPD + +  LID   + G+  +A ++ ++M ERG  P   TY
Sbjct: 200 ECVSKV---FEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG--RFDDAIECLEGL 571
           N++IN + ++   ++   L  NM  +G+  + VTY TL  I G SG    D+A+    GL
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL--ITGLSGVLEMDEAM----GL 310

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
            ++ ++   +     ++P+ +  NS+I+   +  R  +AF V   M ENG   ++VT+  
Sbjct: 311 LEEMIHGETM-----VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNL 365

Query: 632 LMKALIRVDKFHKVF 646
           L+  L+RV K  K  
Sbjct: 366 LIGGLLRVHKVKKAM 380



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 192/418 (45%), Gaps = 12/418 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           + +L++ LC + + +D A  ++  + +  +     ++YS L+      GR E + + F  
Sbjct: 151 YGTLIRGLCDA-ADVDKAVELLREMCESGI-EPNVVVYSCLLQGYCKAGRWECVSKVFEE 208

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + + P  + Y  LI +  R   ++KA  +M KM + G   + + Y+++I S+ +   
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQG-VGLSPKTA 301
           +  ++   L   +    + LD    N +I G +   +  +AM  L  M  G   + P   
Sbjct: 269 VKEAM--SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVV 326

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T+ +VI  L  +GR  +A  V + + E+G       +N L+ G +++  +K A  ++ EM
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             SG+ PD  TYS+LI+ +    + + A  +L +M     +P    Y  +LA   ++G  
Sbjct: 387 ASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMM 446

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           ++      EM  +  + D   Y+ MI    +      A      ML EG+ PD++T++ L
Sbjct: 447 EQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSML 505

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           I+     G    AE + ++M   G+ P    ++ +I   G +   E V  L+  M A+
Sbjct: 506 INMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 140/280 (50%), Gaps = 6/280 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N++I    +   + +A  +   M ++G  C+ + ++L+I  L R +K+  ++  +L 
Sbjct: 326 VTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM--ELM 383

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    +E D    + +I GF K     +A   L   +  G+ P+   Y  ++ AL   
Sbjct: 384 DEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQ 443

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   +A   F+E+ ++  K    AY+ ++ G  ++   K AE  +  M   G++PD  TY
Sbjct: 444 GMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTY 502

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+LI+ +AN+G   +A  VLK+M  S   P+  ++  ++ GY  +G+ ++  ++++EM +
Sbjct: 503 SMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA 562

Query: 434 SGVEPDTHFYNVMIDTFGKYN---CLHHAMAAFDRMLSEG 470
             +  D+   + +       N    L  ++  FD  +S+G
Sbjct: 563 KDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKG 602



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 13/280 (4%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  +Y+ ++ A    G    A + L  +     +P +  Y+ ++          +   +L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           ++M++SGV PD   Y  +I        +  A+     M   GIEP+ + ++ L+  + K 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           GR++   ++FEEM  RG  P    Y  +I+ L  + + +   +++  M  +GL PNVVTY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L++             C EG   +A++    M   G+    +  N+LI          
Sbjct: 257 NVLINSM-----------CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMD 305

Query: 609 EAFAVLQYM--KENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           EA  +L+ M   E  ++P+VVT+ +++  L +  +  + F
Sbjct: 306 EAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAF 345



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 162/363 (44%), Gaps = 45/363 (12%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ LI +L R  K+ +A  +  +   + L P  +TYN LI++  +   +++A++L + 
Sbjct: 219 VMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNN 278

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGF 275
           M + G   D + Y+ +I  L+   ++D +   L + ++ E     +E +    N VI G 
Sbjct: 279 MLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET---MVEPNVVTFNSVIHGL 335

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K G   +A +   M    G +    T+  +I  L    +  +A  + +E+  SGL+P +
Sbjct: 336 CKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDS 395

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             Y+ L+ G+ KM  +  AE ++S+M R G+ P+   Y  L+ A    G  E AR    E
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455

Query: 396 ME-------VSHAK---------------------------PNSFIYSRILAGYRDRGEW 421
           M        V+++                            P+S  YS ++  + + G+ 
Sbjct: 456 MHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDL 515

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +VLK+M +SG  PD   ++ +I  +G        +     M ++ I  D+   +T+
Sbjct: 516 GAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575

Query: 482 IDC 484
             C
Sbjct: 576 YTC 578


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 208/459 (45%), Gaps = 19/459 (4%)

Query: 165 LYSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           + SI+++A   +GR +   E      ++ L P  +TYN L++      D E    ++  M
Sbjct: 228 MCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLM 287

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV-GFAKA 278
            + G   + +  +++++   +  K+D +  +KL +E+E D++ +  + +  V+V G+ + 
Sbjct: 288 SERGVSRNVVTCTMLMRGYCKKGKMDEA--EKLLREVEEDELLVVDERVYGVLVDGYCQM 345

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A+R       VGL         +I      G+  EAE VF  + +  LKP   +Y
Sbjct: 346 GRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY 405

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL GY + G +  A  +  EM   G+ P   TY+ +I    + G ++ A  +   M  
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               PN      +L  +   G+  R   + KE+   G    T  +N MI    K   L  
Sbjct: 466 RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLME 525

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A A FDRM   G+ PD IT+ TL D + K G    A ++   M+ +        YN +I+
Sbjct: 526 AGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLID 585

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  +  DV  LL  M+ +GL PNVVTY TL+  +           C E   D+A + 
Sbjct: 586 GLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGW-----------CDEQKLDKAFHL 634

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
           +  M   G  P+ +  + ++++   D R +EA  +L  M
Sbjct: 635 YFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM 673



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 224/523 (42%), Gaps = 65/523 (12%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ L+ A A     + AL +  +M + G      + S ++  L +  K +  +   ++ 
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQ--KGEGRVAVMVFD 215

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +I    I  D  + + V+    + G    AM  L      GL P   TY  ++      G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL-PDEHTY 373
                E V   + E G+         L++GY K G + +AE ++ E+E   +L  DE  Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 374 SLLIDAYANAGRWESARIVLKEM-----------------------EVSHA--------- 401
            +L+D Y   GR E A  +  EM                       +V  A         
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 402 ---KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KP+ + Y+ +L GY   G+  + F + +EM   G+ P    YN +I           
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+  +  M+  G+ P+ I+  T++DC FK G  DRA  L++E+  RG+   T  +N MI+
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  +  +   +   M+  GL P+ +TY TL D Y ++G   +A +    +  QA++A
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSA 575

Query: 579 ------------FRV------------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       F++            M+T GL P+ +   +LI+ + ++Q+  +AF + 
Sbjct: 576 SIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLY 635

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHK---VFSSYLFFNI 654
             M E G  P+VV  + ++ +L R D+  +   +    L F+I
Sbjct: 636 FEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 190/461 (41%), Gaps = 35/461 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLY 253
           +YN L+    R   + KA  L  +M  DG     + Y+ VI+ L      D +L L  L 
Sbjct: 404 SYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLM 463

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E      E+    + D    F K GD+ +AM       G G +  T  +  +I+ L   
Sbjct: 464 VERGVTPNEISCCTMLDC---FFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKM 520

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+ +EA AVF+ +KE GL P    Y  L  GY K G +++A  +   MER  +      Y
Sbjct: 521 GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMY 580

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LID      +      +L EM+     PN   Y  +++G+ D  +  + F +  EM  
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+    + ++ +  + + +  A    D+ML   I          +  H KC     
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI----------LAVHNKCSDKLV 690

Query: 494 AEELFEEMQERG----------YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
             +L  E Q+                   YNI I+ L +  + ++ + +L  + ++G LP
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           +  TY TL+     SG  D+A +    L D+       M   GL P+    N+LIN   +
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFK----LRDE-------MLEKGLIPNITIYNALINGLCK 799

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                 A  +   + + GL P+ VTY  L+    R+    K
Sbjct: 800 LGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 170/393 (43%), Gaps = 60/393 (15%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
           +  +  ++ A +  G T  A  VF+E+   G  P  ++ + LL   V+ G  + A  V  
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           ++  +G++PD +  S++++A+   GR + A  VL++M     +PN   Y+ ++ GY  RG
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 420 EWQRTFQVLKEMKSSGVE------------------------------------PDTHFY 443
           +++   +VL+ M   GV                                      D   Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            V++D + +   +  A+   D ML  G++ + +  NTLI  + K G+   AE +F  M +
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
               P   +YN +++    + +      L   M   G+ P VVTY T++      G +DD
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 564 A----------------IECLE--------GLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           A                I C          G SD+A+  ++ +   G   S +A N++I+
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
              +  +  EA AV   MKE GL PD +TY TL
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSPDEITYRTL 548



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 154/326 (47%), Gaps = 22/326 (6%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           VF   KE G    +  ++ L+K + + G  K A +V  EM R G +P   + S L+    
Sbjct: 145 VFSVYKEFGFC--SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLV 202

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             G    A +V  ++  +   P+ ++ S ++  +   G      +VL++M   G+EP+  
Sbjct: 203 QKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVV 262

Query: 442 FYNVMIDTF---GKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            YN +++ +   G +  +   +    R++SE G+  + +T   L+  + K G+ D AE+L
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVL----RLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKL 318

Query: 498 FEEMQERGYFPCT-TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             E++E          Y ++++   +  R ED  R+   M   GL  N+V   TL+  Y 
Sbjct: 319 LREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYC 378

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G+  +A     G+ D             LKP   + N+L++ +  + + ++AF + + 
Sbjct: 379 KLGQVCEAERVFVGMVDW-----------NLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M  +G+ P VVTY T++K L+ V  +
Sbjct: 428 MLGDGITPTVVTYNTVIKGLVDVGSY 453



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 136/324 (41%), Gaps = 45/324 (13%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN--------------------SFI 407
           P   +YS+L+    +A  +  A  VL+++   H   N                    S +
Sbjct: 99  PHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGV 158

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           +  ++  + +RG  +    V  EM   G  P     + ++    +      A+  FD+++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             GI PD    + +++ H + GR D A E+ E+M + G  P   TYN ++N    +  +E
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------IE--------------- 566
            V+R+L  M  +G+  NVVT T L+  Y + G+ D+A      +E               
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVL 338

Query: 567 ----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
               C  G  + AV     M   GLK + +  N+LI  + +  +  EA  V   M +  L
Sbjct: 339 VDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNL 398

Query: 623 KPDVVTYTTLMKALIRVDKFHKVF 646
           KPD  +Y TL+    R  K  K F
Sbjct: 399 KPDCYSYNTLLDGYCREGKVSKAF 422



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/501 (21%), Positives = 184/501 (36%), Gaps = 85/501 (16%)

Query: 124 VPAPLWHSLLKNLCSSNSSID---LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           V   + ++L+K  C      +   +   +V W  K + CYSY    + L+    R  K+ 
Sbjct: 365 VNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPD-CYSY----NTLLDGYCREGKVS 419

Query: 181 EAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           +AF+L +      +TP  +TYN +I         + AL+L   M + G   + I+   ++
Sbjct: 420 KAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTML 479

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
               +    D +++  L+KEI            N +I G  K G   +A       + +G
Sbjct: 480 DCFFKMGDSDRAMM--LWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537

Query: 296 LSPKTATYAAVITALSNSGRTIEA---EAVFE---------------------------- 324
           LSP   TY  +      +G   EA   + V E                            
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597

Query: 325 ----ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
               E++  GL P    Y  L+ G+     L  A  +  EM   G  P+    S ++ + 
Sbjct: 598 DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657

Query: 381 ANAGRWESARIVLKEM-----------------------------------EVSHAKPNS 405
               R   A ++L +M                                   ++ ++  N+
Sbjct: 658 YRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNN 717

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
            +Y+  + G    G+      VL  + S G  PD   Y  +I        +  A    D 
Sbjct: 718 IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDE 777

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           ML +G+ P+   +N LI+   K G  DRA+ LF ++ ++G  P   TYNI+I        
Sbjct: 778 MLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837

Query: 526 WEDVKRLLGNMRAQGLLPNVV 546
            +   RL   M  +G+   ++
Sbjct: 838 LDKASRLREKMTEEGISTRII 858


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 216/446 (48%), Gaps = 14/446 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L++A  R + + +  +L +KM   G + D     +++++  +  +++ +  ++ ++E 
Sbjct: 229 NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA--EEYFRET 286

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   ++LD    + +I    K  +++  +  L   +  G  P  AT+ +VI A    G  
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +EA  + EE+   G         +L+KGY   G L  A  + +++   G+ P++ TYS+L
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+   N+G  E A  +  +M+++   P+ F  + +L GY     W+   ++  E    GV
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             +   YN+M+    K   +  A +  D M+++G+ P+ +++N +I  H + G  D A  
Sbjct: 467 A-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 525

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +F +M  R   P   TY+I+I+   ++   E    L   M +  + P   T+ T+++   
Sbjct: 526 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 585

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G+  +A + L+   ++           G  PS +  NS+++ F ++     A AV + 
Sbjct: 586 KVGQMSEARDKLKNFLEE-----------GFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 634

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M E G+ P+VVTYT+L+    + ++ 
Sbjct: 635 MCEFGVSPNVVTYTSLINGFCKSNRI 660



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 192/407 (47%), Gaps = 13/407 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN ++S   +   +++A +L+  M   G   + ++Y+ +I    R   +D  +   ++
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD--MASSVF 527

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++    ++ +    + +I G  K GD+ KA+        + ++P   T+  +I  L   
Sbjct: 528 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA    +   E G  P    YN+++ G++K G +  A  V  EM   GV P+  TY
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+ +  + R + A     EM     + +   YS ++ G+  R + +    +  E+  
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN MI  F   N +  A+  + +M+++ I  D  T+ TLID   K GR   
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 767

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L+ EM  +G  P   T+++++N L  + + E+ +++L  M  + + P+V+ Y TL+ 
Sbjct: 768 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 827

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            Y + G   +A    + + D+           GL P ++  + LIN 
Sbjct: 828 GYFREGNLKEAFTLHDEMLDR-----------GLVPDDVTYDILING 863



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 211/469 (44%), Gaps = 28/469 (5%)

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           CA+ + L+ ALNL +K+ +DG   + + YS++I+    +  I+ +   +LY +++ + I 
Sbjct: 376 CAQGN-LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA--SELYTQMKLNGIP 432

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
                +N ++ G+ KA    +A +    A   G++    TY  +++ L   G+  EA ++
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 491

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +   G+ P   +YN ++ G+ + G +  A  V S+M    + P+  TYS+LID    
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G  E A  +  +M   +  P  F ++ I+ G    G+       LK     G  P    
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN ++D F K   +  A+A +  M   G+ P+ +T+ +LI+   K  R D A +  +EM+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ----- 557
           E+G     T Y+ +I+   ++   E  + L   +   GL PN + Y +++  +       
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 558 ------SGRFDDAIEC--------LEGLSDQ-----AVNAFRVMRTDGLKPSNLALNSLI 598
                     +D I C        ++GL  +     A + +  M + G+ P  +  + L+
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           N      +   A  +L+ M    + P V+ Y TL+    R     + F+
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 230/523 (43%), Gaps = 35/523 (6%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQ 187
           SL+K  C+   ++D A  + + + +  L +  ++ YS+LI      G  EK  E +   +
Sbjct: 370 SLMKGYCAQ-GNLDSALNLFNKITEDGL-FPNKVTYSVLIEGCCNSGNIEKASELYTQMK 427

Query: 188 RQRLTPLTYN--ALISACARNDDLEKALNLMSKMRQDGYHCDFIN---YSLVIQSLTRTN 242
              + P  +N  +L+    +    E+A    SK+  +   C   N   Y++++  L +  
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEA----SKLFDEAVDCGVANIFTYNIMMSWLCKGG 483

Query: 243 KID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           K+D   SLL  +  +     +       ND+I+G  + G+   A           L P  
Sbjct: 484 KMDEACSLLDNMVNQGMVPNV----VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 539

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY+ +I      G + +A  +F+++    + P    +N ++ G  K+G + +A   +  
Sbjct: 540 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 599

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
               G +P   TY+ ++D +   G  +SA  V +EM      PN   Y+ ++ G+     
Sbjct: 600 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                +   EM+  G+E D   Y+ +ID F K   +  A   F  +L  G+ P+ I +N+
Sbjct: 660 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 719

Query: 481 LIDCHFKCGRYDRAEELFEEM-QERGYFPCTT-TYNIMINLLGEQERWEDVKRLLGNMRA 538
           +I         + A   +++M  +R   PC   TY  +I+ L ++ R      L   M +
Sbjct: 720 MISGFRDLNNMEAALVWYKKMINDR--IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS 777

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G++P+++T+  LV+     G+ ++A + LE            M    + PS L  N+LI
Sbjct: 778 KGIVPDIITFHVLVNGLCNKGQLENARKILEE-----------MDRKNMTPSVLIYNTLI 826

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +  +    EAF +   M + GL PD VTY  L+    + D+
Sbjct: 827 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 202/457 (44%), Gaps = 18/457 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMR-QDGYHCDFINY-SLVIQSLTRTNKIDSSLLQKL 252
            +N L++A  R + +E A++  + M  QD     ++ Y ++++ +L R N I    L+ L
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVI--PWVPYMNILLTALVRRNMIGE--LRDL 247

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           Y ++    I  D   ++ ++    K G   +A  +    +  G+      Y+ +I A+  
Sbjct: 248 YNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCK 307

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
              +     + EE+KE G  P    + +++   V  G + +A  +  EM   G   +   
Sbjct: 308 KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 367

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            + L+  Y   G  +SA  +  ++      PN   YS ++ G  + G  ++  ++  +MK
Sbjct: 368 ATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK 427

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +G+ P     N ++  + K      A   FD  +  G+  +  T+N ++    K G+ D
Sbjct: 428 LNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMD 486

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L + M  +G  P   +YN MI     +   +    +  +M A+ L PNVVTY+ L+
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D     G F       +G S++A++ F  M +  + P++   N++IN   +  + +EA  
Sbjct: 547 D-----GNFK------KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARD 595

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            L+   E G  P  +TY +++   I+        + Y
Sbjct: 596 KLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 632



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 107/496 (21%), Positives = 190/496 (38%), Gaps = 48/496 (9%)

Query: 189 QRLTPLTYNALISA--CARNDDLEKALNLMSKMR-QDGYHCDFINYSLVIQSLTRTNKID 245
           Q  TPL+ N +I A  C  ND  + AL    +   Q G+      Y +++  L R+ +  
Sbjct: 93  QETTPLSQNHVIDALLCHVNDP-QSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETH 151

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
                               +LLN  + G +           +  A+          +  
Sbjct: 152 GHA----------------RKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNY 195

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ A   + R   A   F  +    + P     N LL   V+   + +   + ++M   G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +  D  T  +++ A    GR E A    +E +    K ++  YS I+     +       
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315

Query: 426 QVLKEMKSSGVEP-DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+EMK  G  P +  F +V++    + N +  A+   + M++ G   + +   +L+  
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGN-MVEALRLKEEMINCGKPMNLVVATSLMKG 374

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           +   G  D A  LF ++ E G FP   TY+++I         E    L   M+  G+ P+
Sbjct: 375 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434

Query: 545 VVTYTTLVDIYGQ-------SGRFDDAIE----------------CLEGLSDQAVNAFRV 581
           V    +L+  Y +       S  FD+A++                C  G  D+A +    
Sbjct: 435 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDN 494

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR--- 638
           M   G+ P+ ++ N +I           A +V   M    LKP+VVTY+ L+    +   
Sbjct: 495 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 554

Query: 639 VDKFHKVFSSYLFFNI 654
            +K   +F   L  NI
Sbjct: 555 SEKALDLFDQMLSLNI 570


>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
 gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
          Length = 461

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 191/416 (45%), Gaps = 20/416 (4%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG-VGLSPKTATYAAVITA 309
           +L K++  +   L  Q LN  + G  KAG+   A+ FL  A+    L    +TY+ ++ A
Sbjct: 37  ELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAA 96

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+ + R  +A  + E+++  GL+     Y+ ++    K G +  A+ +V  M     +PD
Sbjct: 97  LTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPD 156

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
              Y  +I+  +  GR + A  + KE +  H   +   Y+ ++ G+      +R  +V  
Sbjct: 157 ARIYDPVIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVFT 215

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M  +G  PD + YN++ +   ++     A     RM  +G+ PD +T+N+LI+   +  
Sbjct: 216 RMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDN 275

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           RY RA  L +EM  RG  P   TY I++  L    R ++   L   +  + L PNV TY 
Sbjct: 276 RYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYN 335

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM-RTDGLKPSNLALNSLINAFGEDQRDA 608
           T++    ++GR            DQA   F VM  +D   P+ +   +LI+         
Sbjct: 336 TVMSALCKAGRL-----------DQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELE 384

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
            A  +L  M + G  PDV  Y T++ A  +  +  + F       + + + ++G+K
Sbjct: 385 RAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFE------LLERMPFAGDK 434



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 167/381 (43%), Gaps = 49/381 (12%)

Query: 195 TYNALI---SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           TY+ L+   +A  RN+D   AL L+ +M   G   D   YSL+I SL ++  +D +    
Sbjct: 89  TYSILVAALTAAKRNND---ALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKA---- 141

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
                   K+ ++  +  + +                         P    Y  VI  LS
Sbjct: 142 --------KVLVERMISRNCV-------------------------PDARIYDPVIEELS 168

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKA--YNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
            +GR  EA    E  KE+  K  T    YN+L+ G++K   LK    V + M R+G  PD
Sbjct: 169 KTGRVDEA---VEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPD 225

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            +TY++L +  +  G W  A  +L  M      P+   ++ ++ G  +   + R   +++
Sbjct: 226 IYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQ 285

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM S G +P+   Y +++    +       +  F R+L   + P+  T+NT++    K G
Sbjct: 286 EMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAG 345

Query: 490 RYDRAEELFEEMQERGYFPCTT-TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           R D+A  LF  M      P    TY  +I+ L  +   E    LL  M  +G  P+V  Y
Sbjct: 346 RLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACY 405

Query: 549 TTLVDIYGQSGRFDDAIECLE 569
            T+V  + + GR D+A E LE
Sbjct: 406 GTIVAAFCKQGRIDEAFELLE 426



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 135/340 (39%), Gaps = 40/340 (11%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYH 225
           YS++IH+L +S  + +A +L +R        +A I                         
Sbjct: 125 YSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARI------------------------- 159

Query: 226 CDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE---CDKIELDGQLLNDVIVGFAKAGDAS 282
                Y  VI+ L++T ++D ++  ++ KE +   C  +       N +++GF KA    
Sbjct: 160 -----YDPVIEELSKTGRVDEAV--EIAKEADAKHCTSV----VTYNSLVLGFLKARRLK 208

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           + ++        G SP   TY  +   LS  G    A  +   + + G+ P    +N+L+
Sbjct: 209 RGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLI 268

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G V+      A  ++ EM   G  P+  TY++L+   A   R +    + + +      
Sbjct: 269 NGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDRKLA 328

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF-YNVMIDTFGKYNCLHHAMA 461
           PN + Y+ +++     G   +  ++   M +S   P     Y  +I        L  A+ 
Sbjct: 329 PNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERAVL 388

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
             D M   G  PD   + T++    K GR D A EL E M
Sbjct: 389 LLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERM 428


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T L ++ L+   +R   ++ +L ++ KM+    +    +Y+ V+     T+K     +  
Sbjct: 123 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 177

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +YKEI+ DK E      + V+ G  +      A+ FL  ++   + P   ++ ++++   
Sbjct: 178 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G    A++ F  + + GL P   ++N L+ G   +G + +A  + S+M + GV PD  
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY++L   +   G    A  V+++M      P+   Y+ +L G    G       +LK+M
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353

Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
            S G E ++    +VM+    K   +  A++ F++M ++G+ PD + ++ +I    K G+
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           +D A  L++EM ++   P + T+  ++  L ++    + + LL ++ + G   ++V Y  
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++D Y +SG       C+E    +A+  F+V+   G+ PS    NSLI  + + Q  AEA
Sbjct: 474 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKA 635
             +L  +K  GL P VV+YTTLM A
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDA 547



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 200/475 (42%), Gaps = 66/475 (13%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YS V+  L R  K++ ++L    +  E   I       N ++ G+ K G    A  F   
Sbjct: 190 YSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               GL P   ++  +I  L   G   EA  +  ++ + G++P +  YN L KG+  +G 
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-YS 409
           +  A  V+ +M   G+ PD  TY++L+      G  +   ++LK+M     + NS I  S
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            +L+G    G       +  +MK+ G+ PD   Y+++I    K      A+  +D M  +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 470 GIEP-----------------------------------DTITWNTLIDCHFKCGRYDRA 494
            I P                                   D + +N +ID + K G  + A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            ELF+ + E G  P   T+N +I    + +   + +++L  ++  GL P+VV+YTTL+D 
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           Y   G            + ++++  R  M+ +G+ P+N+  + +        +      V
Sbjct: 548 YANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595

Query: 614 LQY------------MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           L+             M+  G+ PD +TY T+++ L RV      F   +F  I K
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF---VFLEIMK 647



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS ++  L R +KL +A L    S+ + + P  +++N+++S   +   ++ A +    + 
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G      +++++I  L     I  +L  +L  ++    +E D    N +  GF   G 
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 307

Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
            S A   +      GLSP   TY                                    +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +++ L  +GR  EA ++F ++K  GL P   AY+ ++ G  K+G    A ++  EM   
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
            +LP+  T+  L+      G    AR +L  +  S    +  +Y+ ++ GY   G  +  
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            ++ K +  +G+ P    +N +I  + K   +  A    D +   G+ P  +++ TL+D 
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
           +  CG     +EL  EM+  G  P   TY+++   L             +ER +E  K+ 
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L +M ++G+ P+ +TY T++    +      A   LE           +M++  L  S+ 
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 656

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LI++        +A + +  ++E  +      YTTL+KA
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 156/372 (41%), Gaps = 51/372 (13%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           + ++S   +   +++AL+L ++M+ DG   D + YS+VI  L +  K D +L   LY E+
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 424

Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
            CDK                      +E              LD  L N VI G+AK+G 
Sbjct: 425 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+    +    G++P  AT+ ++I     +    EA  + + +K  GL P   +Y  
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
           L+  Y   G  K  + +  EM+  G+ P   TYS++        + E+   VL+E     
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603

Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                  ME     P+   Y+ I+            F  L+ MKS  ++  +  YN++ID
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +   Y  +  A +    +  + +      + TLI  H   G  + A +LF ++  RG+  
Sbjct: 664 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 723

Query: 509 CTTTYNIMINLL 520
               Y+ +IN L
Sbjct: 724 SIRDYSAVINRL 735



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 60/325 (18%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           + +++K+  L   T++YN++L  + +   + D   V  E++      +EHTYS ++D   
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLC 198

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              + E A + L+  E     P+   ++ I++GY   G                      
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 236

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
                +D          A + F  +L  G+ P   + N LI+     G    A EL  +M
Sbjct: 237 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283

Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            + G  P + TYNI+    +LLG     WE ++    +M  +GL P+V+TYT L+    Q
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 339

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G  D  +  L+   D     F +   + + P ++ L+ L        R  EA ++   M
Sbjct: 340 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 389

Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
           K +GL PD+V Y+ ++  L ++ KF
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKF 414


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 188/456 (41%), Gaps = 51/456 (11%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TYN LI       DL+ A +L+ +M  +G  C+    S+++Q L R  ++ +  L+   
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRV-AQALEHFD 84

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +E                              L  AQ     P   +Y  +I  L   
Sbjct: 85  ASLE------------------------------LAHAQ-----PDVVSYTTLINGLCKL 109

Query: 314 GRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           GR   A  +F ++    G +P    YNAL+ G  K   L  A  V++E  +    PD  T
Sbjct: 110 GRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVT 169

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+ A    GR + A     +M      P    ++ I+ G           +V  EM 
Sbjct: 170 YNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMI 229

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
                P+   Y+V+ID   K + L  A    DRM+SEG  PD + +  L+      GR D
Sbjct: 230 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 289

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  L   M  +G  P   TY ++I+ L +  R +D   +   + A    PNVVTY+ L+
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             Y ++ R D+                +VMR    +P+ +  N++I       R+ EA+ 
Sbjct: 350 GGYCRASRVDE--------------GGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYG 395

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           + + M E G  PD  TY  L +AL  +D+   V + 
Sbjct: 396 MFREMSECGFVPDARTYRGLKRALRMIDQPPHVLTG 431



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 173/401 (43%), Gaps = 17/401 (4%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L++E  C ++       N +I GF  A D   A   L      G+     T + ++  L
Sbjct: 12  QLFRENPC-QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGL 70

Query: 311 SNSGRTIEAEAVFE-ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-ERSGVLP 368
              GR  +A   F+  L+ +  +P   +Y  L+ G  K+G +  A  +  +M    G  P
Sbjct: 71  CRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRP 130

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TY+ L+D      R ++AR V+ E       P+   Y+ ++A     G         
Sbjct: 131 NAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 190

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            +M   G  P    +N +I    +   L  A+  F+ M+     P+ +T++ +ID   K 
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKS 250

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
            + D A++L + M   G  P    Y  ++       R +    LL  M +QG +P+VVTY
Sbjct: 251 DQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T ++D   + GR DDA E            FR +  +   P+ +  ++LI  +    R  
Sbjct: 311 TVVIDKLCKVGRVDDAHE-----------IFRELVANKCSPNVVTYSALIGGYCRASRVD 359

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           E   V   M+E   +P+VVTY T++  L  VD+  + +  +
Sbjct: 360 EGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMF 397



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 11/322 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ------RLTPLTYNALISACARNDDLEKALNLMSKM 219
           Y+ LI+ L +  ++  AF L ++       R    TYNAL+    + D L+ A  ++++ 
Sbjct: 99  YTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEA 158

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R+  +  D + Y+ ++ +L +  ++D +L    + ++  +         N +I G  +A 
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEAL--ATFTQMTEEGYVPTLVSFNAIITGLCRAR 216

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             + A+            P   TY+ VI  L  S +  EA+ + + +   G +P   AY 
Sbjct: 217 RLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYT 276

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ G+   G L  A  ++  M   G +PD  TY+++ID     GR + A  + +E+  +
Sbjct: 277 PLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVAN 336

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   YS ++ GY          +V++EM      P+   YN MI      +    A
Sbjct: 337 KCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEA 393

Query: 460 MAAFDRMLSEGIEPDTITWNTL 481
              F  M   G  PD  T+  L
Sbjct: 394 YGMFREMSECGFVPDARTYRGL 415



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 12/285 (4%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLL 185
           +++L+  LC  +  +D A AV++  +K +      +Y  L + L   LGR ++    F  
Sbjct: 135 YNALVDGLCKQDR-LDAARAVITEARKRDFAPDVVTYNTLMAALFQ-LGRVDEALATFTQ 192

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              +   P  +++NA+I+   R   L  AL + ++M    +H + + YS+VI  L ++++
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +  Q+L   +  +    D      +++GF+ AG    A+  L      G  P   TY
Sbjct: 253 LDEA--QQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTY 310

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             VI  L   GR  +A  +F EL  +   P    Y+AL+ GY +   + +   V+ EM  
Sbjct: 311 TVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM-- 368

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
               P+  TY+ +I   +   R E A  + +EM      P++  Y
Sbjct: 369 -ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 14/332 (4%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +G   E     E +   G  P   A  AL++ + K+G  K+A  ++  +E SG + D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            ++Y++LI+AY  +G  E A  VL    V+   PN+  Y  +L    DRG+ ++  QVL 
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
               S   PD     V+ID   K + +  AM  F+ M  +G +PD +T+N LI    K G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A    +++   G      ++N+++  L    RW D  +LL  M  +G  P+VVT+ 
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++             C +GL  +A+N   +M   G  P++ + N LI  F   +    
Sbjct: 316 ILINFL-----------CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDR 364

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           A   L+ M   G  PD+VTY  L+ AL +  K
Sbjct: 365 AIEHLEIMVSRGCYPDIVTYNILLTALCKDGK 396



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 208/458 (45%), Gaps = 33/458 (7%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           RN +LE+    +  M   G   D +  + +I+   +  +  ++   ++   +E     +D
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNA--TRIMGILEESGAVID 138

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I  + K+G+  +A+R L       ++P  ATY AV+ +L + G+  +A  V +
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
              +S   P       L+    K   +  A  + +EM   G  PD  TY++LI  +   G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           R + A I LK++     + +   ++ IL      G W    ++L  M   G  P    +N
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQ 502
           ++I+   +   L  A+   + M   G  P++ ++N LI   C+ K    DRA E  E M 
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRK--GIDRAIEHLEIMV 373

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
            RG +P   TYNI++  L +  + +D   +L  + ++G  P++++Y T++D   + G+ +
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 563 DAIECLE-------------------GLS-----DQAVNAFRVMRTDGLKPSNLALNSLI 598
            A+E LE                   GLS      +A+  F  ++  G+KP+    NS++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
               + Q+ + A   L  M  NG KP   +YTTL+K +
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGI 531



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 176/390 (45%), Gaps = 6/390 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           Y++LI+A  +S ++ EA  +     + P   TY+A++ +      L++A+ ++ +  Q  
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK 201

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
            + D +  +++I +  + + +  ++  KL+ E+     + D    N +I GF K G   +
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAM--KLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+ FL      G      ++  ++ +L + GR ++A  +   +   G  P    +N L+ 
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
              + G L  A  V+  M + G  P+  +++ LI  + N    + A   L+ M      P
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
           +   Y+ +L      G+      +L ++ S G  P    YN +ID   K      A+   
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN-IMINLLGE 522
           + M  +G++PD IT  +++    + G+   A + F  ++  G  P    YN IM+ L   
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKA 499

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           Q+    +  L+ +M A G  P   +YTTL+
Sbjct: 500 QQTSLAIDFLV-DMVANGCKPTEASYTTLI 528



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/436 (21%), Positives = 190/436 (43%), Gaps = 12/436 (2%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           R+   L ES   + A  ++ L+   C S   I+ A  V+     H         Y  ++ 
Sbjct: 125 RIMGILEESGAVIDANSYNVLINAYCKS-GEIEEALRVLD----HTSVAPNAATYDAVLC 179

Query: 172 ALGRSEKLYEAFLLSQRQ---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           +L    KL +A  +  RQ   +  P  +T   LI A  +   + +A+ L ++MR  G   
Sbjct: 180 SLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKP 239

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D + Y+++I+   +  ++D +++    K++     + D    N ++      G    AM+
Sbjct: 240 DVVTYNVLIKGFCKEGRLDEAII--FLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMK 297

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            L      G  P   T+  +I  L   G   +A  V E + + G  P ++++N L++G+ 
Sbjct: 298 LLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 357

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
               +  A   +  M   G  PD  TY++L+ A    G+ + A ++L ++      P+  
Sbjct: 358 NRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 417

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ ++ G    G+ +   ++L+EM   G++PD      ++    +   +H A+  F  +
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL 477

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              GI+P+   +N+++    K  +   A +   +M   G  P   +Y  +I  +  +   
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLA 537

Query: 527 EDVKRLLGNMRAQGLL 542
           E+  +L   + ++GL+
Sbjct: 538 EEASKLSNELYSRGLV 553


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 208/436 (47%), Gaps = 14/436 (3%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           LT  TY+  ISA  +++ +E    L++ M + G   D    ++ +  L + N++  +L  
Sbjct: 229 LTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDAL-- 286

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           K  + +       D      V+         ++A+         GL P       +I  L
Sbjct: 287 KTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGL 346

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             S +  EA  +   +    L+     YNAL+ G+++ G +  A  ++S M  +G  PD 
Sbjct: 347 CKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDV 406

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSH-AKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
            TY++ ++ Y N G  + A  +++EME+S    P+ + Y+++L G     +  R F  + 
Sbjct: 407 VTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVS 466

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +    G   D    N++ID F K   +  A+  F  M  +GI+ D +T+ TLI+  +  G
Sbjct: 467 DHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVG 526

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
            Y  AEE+FE+M +    P    YNIM++ L +  ++E  +++   M  + + P+++T+ 
Sbjct: 527 YYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFN 586

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+   G+  R   AIE        A++ FR M   G++P +L    LI+   E+ +  +
Sbjct: 587 TLIYWLGKCSR---AIE--------AIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQ 635

Query: 610 AFAVLQYMKENGLKPD 625
           A+ V +YM ENG+  D
Sbjct: 636 AYEVWEYMLENGIILD 651



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 8/314 (2%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
            +LI  L +S+K+ EAF     +LS    L    YNALIS   R+  + KA  ++S MR 
Sbjct: 340 GVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRT 399

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI-ELDGQLLNDVIVGFAKAGD 280
           +G   D + Y++ +     T  I  +  +KL +E+E   I   D    N ++ G  KA  
Sbjct: 400 NGCEPDVVTYNIRLNHYCNTGMIKEA--EKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQ 457

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A  F+     VG      +   +I A   + +   A  +F+E+   G++     Y  
Sbjct: 458 LDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGT 517

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G   +GY   AE +  +M ++ V+P+ + Y++++     AG++E A+ +  +M    
Sbjct: 518 LINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKE 577

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   ++ ++              + ++M + G+EPD+  +  +I    +      A 
Sbjct: 578 VSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAY 637

Query: 461 AAFDRMLSEGIEPD 474
             ++ ML  GI  D
Sbjct: 638 EVWEYMLENGIILD 651



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/487 (21%), Positives = 182/487 (37%), Gaps = 62/487 (12%)

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
            + ++R  G       Y +++    R  K DS +    + E+        G   N  I  
Sbjct: 148 FLERVRSQGVALHRSLYRILLSGYVRAGKFDSVI--HTFDEMVTSGCREFGVDYNRFIGV 205

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
             K        ++  +A   G    + TY+  I+AL  S R    E +  ++ + G  P 
Sbjct: 206 LVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
             A N  +    K   L DA   +  M   G  PD  TY+ ++    +  ++  A  + +
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM     KP+      ++ G     +    F++   M S  +E +   YN +I  F +  
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ------------ 502
            ++ A      M + G EPD +T+N  ++ +   G    AE+L EEM+            
Sbjct: 386 SINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSY 445

Query: 503 ------------------------ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
                                   E G F    + NI+I+   + ++     +L   M  
Sbjct: 446 NQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGY 505

Query: 539 QGLLPNVVTYTTLVD-IYGQSGRF--DDAIE---------------------CLEGLSDQ 574
           +G+  + VTY TL++ +YG    +  ++  E                     C  G  +Q
Sbjct: 506 KGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQ 565

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
           A   F  M    + P  +  N+LI   G+  R  EA  + + M   G++PD +T+  L+ 
Sbjct: 566 AQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLIS 625

Query: 635 ALIRVDK 641
            L+   K
Sbjct: 626 GLLEEGK 632



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 144/362 (39%), Gaps = 47/362 (12%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL   +  G++   + Y  +++    +G+       F+E+  SG +     YN  +   V
Sbjct: 148 FLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLV 207

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K       E   S     G      TYS  I A       +S RI L E           
Sbjct: 208 KNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALC-----QSERIELVE----------- 251

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
                              ++L +M   G  PD    N+ +D   K+N LH A+   + M
Sbjct: 252 -------------------RLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENM 292

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G  PD +T+ T++ C     ++  A EL+EEM  RG  P      ++I  L + ++ 
Sbjct: 293 WIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKV 352

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           ++   L   M +  L  NV  Y  L+  + +SG  + A + +            VMRT+G
Sbjct: 353 DEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIIS-----------VMRTNG 401

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL-KPDVVTYTTLMKALIRVDKFHKV 645
            +P  +  N  +N +       EA  +++ M+ +G+  PD  +Y  ++K L +  +  + 
Sbjct: 402 CEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRA 461

Query: 646 FS 647
           F 
Sbjct: 462 FG 463



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 17/224 (7%)

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           + L+ ++S GV      Y +++  +   GK++ + H    FD M++ G     + +N  I
Sbjct: 147 EFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHT---FDEMVTSGCREFGVDYNRFI 203

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               K   +D  E+ +    ++G+   + TY+  I+ L + ER E V+RLL +M   G  
Sbjct: 204 GVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCF 263

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++      VD   +  R  DA++ LE            M   G  P  +   +++    
Sbjct: 264 PDIWACNIYVDCLCKHNRLHDALKTLEN-----------MWIRGTNPDVVTYTTVVGCLC 312

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           ++++ AEA  + + M   GLKPD+V    L+  L + DK  + F
Sbjct: 313 DNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAF 356


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 202/449 (44%), Gaps = 23/449 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKL 252
           T   +I++    + ++ A + ++K+ + G+  D   ++ +I+ L    KI  +L    K+
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALS 311
             E     +   G L+N    G  K G+ S A+R L  M QG    P    ++ +I +L 
Sbjct: 167 IGEGFQPNVVTYGTLIN----GLCKVGNTSAAIRLLRSMEQG-NCQPNVVVFSTLIDSLC 221

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
              +  EA  +F E+   G+ P    YN+L+ G  K+   K    +++EM  S ++PD  
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 281

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T + ++DA    G    A  V+  M     +PN   Y+ ++ G+  R E     +V   M
Sbjct: 282 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 341

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCG 489
                  +   YN +I+ + K   +  AM  F+ M  + + P+T+T+NTLI   CH   G
Sbjct: 342 VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV--G 399

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A  LF EM  RG  P   TY  + + L +    +    LL  +      P++  YT
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 459

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           T++D   ++G  +DA +    LS +           GL+P+    N +I+   +    AE
Sbjct: 460 TILDGMCRAGELEDARDLFSNLSSK-----------GLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           A  +   M +NG  P+  TY  + +  +R
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLR 537



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 199/485 (41%), Gaps = 57/485 (11%)

Query: 156 HNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNL 215
           HN  +S  L ++ L  AL    ++     L ++   + + +N L+++ A+       L+L
Sbjct: 38  HNTFHSKPLHFNTLDEALSTFNRM-----LHKQPPPSTVDFNRLLTSIAKTKHHSTLLSL 92

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIV 273
             +M   G   D    ++VI SL   N++D   S L K+ K                   
Sbjct: 93  SRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK------------------- 133

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
                               +G  P   T+  +I  L   G+  EA  +F+++   G +P
Sbjct: 134 --------------------LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  L+ G  K+G    A  ++  ME+    P+   +S LID+     +   A  + 
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM      PN   Y+ ++ G     EW+    ++ EM  S + PD    N ++D   K 
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 293

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A    D M+  G+EP+ +T+N L+D H      D A ++F+ M  +       +Y
Sbjct: 294 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 353

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N +IN   + +  +    L   M  Q L PN VTY TL+      GR  DAI        
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI-------- 405

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              + F  M   G  P  +   +L +   +++   +A A+L+ ++ +   PD+  YTT++
Sbjct: 406 ---SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 634 KALIR 638
             + R
Sbjct: 463 DGMCR 467



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/456 (23%), Positives = 190/456 (41%), Gaps = 14/456 (3%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE-LLYSILIHALGRSEKLYEAFLLSQR-- 188
           ++ +LC  N  +D A++ ++ + K  L +  +   ++ LI  L    K+ EA  L  +  
Sbjct: 111 VINSLCHLNR-VDFAFSALAKILK--LGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
            +   P  +TY  LI+   +  +   A+ L+  M Q     + + +S +I SL +  ++ 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            +    ++ E+    I  +    N +I G  K  +       +       + P   T   
Sbjct: 228 EAF--NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           V+ AL   G   EA  V + +   G++P    YNAL+ G+     +  A  V   M    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
            + +  +Y+ LI+ Y      + A  + +EM      PN+  Y+ ++ G    G  Q   
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +  EM + G  PD   Y  + D   K   L  AMA    +     +PD   + T++D  
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G  + A +LF  +  +G  P   TYNIMI+ L +Q    +  +L   M   G  PN 
Sbjct: 466 CRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPND 525

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
            TY  +   +    R ++A+  +E L +     F V
Sbjct: 526 CTYNLITRGF---LRNNEALRTIELLEEMLARGFSV 558



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 156/375 (41%), Gaps = 37/375 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + ++ LI +  ++  + +A N+ S+M   G   + + Y+ +I  L +    +   +  L 
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL--CEWKHVTTLM 268

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI------ 307
            E+   KI  D   LN V+    K G  ++A   + M    G+ P   TY A++      
Sbjct: 269 NEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLR 328

Query: 308 -------------------------TALSNSGRTIE----AEAVFEELKESGLKPRTKAY 338
                                      L N    I+    A  +FEE+    L P T  Y
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTY 388

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G   +G L+DA  +  EM   G +PD  TY  L D        + A  +LK +E 
Sbjct: 389 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 448

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S+  P+  IY+ IL G    GE +    +   + S G++P+   YN+MI    K   L  
Sbjct: 449 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 508

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  M   G  P+  T+N +     +     R  EL EEM  RG+    +T  +++ 
Sbjct: 509 ASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVG 568

Query: 519 LLGEQERWEDVKRLL 533
           +L +    + VK++L
Sbjct: 569 MLSDDGLDQSVKQIL 583



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 152/352 (43%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P T  +  ++T+++ +       ++  ++   G+ P       ++     +  +  A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G  PD  T++ LI      G+   A  +  +M     +PN   Y  ++ G   
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      ++L+ M+    +P+   ++ +ID+  K   +  A   F  M+++GI P+ +T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N+LI    K   +     L  EM +    P   T N +++ L ++    +   ++  M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ PNVVTY  L+D +           CL    D AV  F  M       + ++ N+L
Sbjct: 308 HRGVEPNVVTYNALMDGH-----------CLRNEVDVAVKVFDTMVHKDCVANVISYNTL 356

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + + Q   +A  + + M    L P+ VTY TL+  L  V +     S +
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 9/275 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
           +++L+   C  N  +D+A  V   +  H  C +  + Y+ LI+   + + + +A  L + 
Sbjct: 318 YNALMDGHCLRNE-VDVAVKVFDTMV-HKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 375

Query: 188 --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             RQ LTP  +TYN LI        L+ A++L  +M   G   D + Y  +   L +   
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D ++   L K IE    + D Q+   ++ G  +AG+   A          GL P   TY
Sbjct: 436 LDKAM--ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 493

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             +I  L   G   EA  +F E+ ++G  P    YN + +G+++         ++ EM  
Sbjct: 494 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLA 553

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
            G   D  T +LL+   ++ G  +S + +L ++ +
Sbjct: 554 RGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIVI 588



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 11/197 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A++ F+RML +   P T+ +N L+    K   +     L  +M   G  P   T
Sbjct: 48  FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 107

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             I+IN L    R +     L  +   G  P+  T+TTL+              C+EG  
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL-----------CVEGKI 156

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F  M  +G +P+ +   +LIN   +    + A  +L+ M++   +P+VV ++TL
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 633 MKALIRVDKFHKVFSSY 649
           + +L +  +  + F+ +
Sbjct: 217 IDSLCKDRQVTEAFNIF 233


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 226/527 (42%), Gaps = 88/527 (16%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN L+ +C R + +E    L   M       +   ++L+I  L  +  ++ +  ++L+ +
Sbjct: 115 YNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDA--RELFDK 172

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +     E +      ++ G+ +AG ASK +  LG  + +G+ P    Y  +I++    G+
Sbjct: 173 MPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGK 232

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL----PDEH 371
           T +AE + ++++E GL P  + +N+ +      G + +A  +  +M+    L    P+  
Sbjct: 233 THDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVI 292

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY L++  +   G  E A+ ++  M+ +    N   Y+  L G    G+    + VLKEM
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI--------- 482
              G+EPD + YN+++D   K   L  A      M+  GI PDT+T++TL+         
Sbjct: 353 LGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKV 412

Query: 483 -------------DCH-------------FKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
                        +C              +K GR   AE L ++M E+GY   T T NI+
Sbjct: 413 FEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNII 472

Query: 517 INLL---GEQER--------WEDVKRLLGNM------------RAQGLLPNVVTYTTLVD 553
           IN L   G+ ++        W      LGN+              +   P++VTY+T++ 
Sbjct: 473 INALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIIS 532

Query: 554 IYGQSGRFDDA----IE--------------------CLEGLSDQAVNAFRVMRTDGLKP 589
              ++GR DDA    IE                    C EG    A    + M   G   
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +    NSLI   G   +  E + ++  M+E G+ PDV TY  ++  L
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCL 639



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 130/590 (22%), Positives = 230/590 (38%), Gaps = 97/590 (16%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           L+++L+ + C    + D A  +V  +++  L    E   S  I AL  S K+ EA  + +
Sbjct: 219 LYNTLISSFCKEGKTHD-AEKLVDKMREDGLVPHVETFNS-RISALCGSGKILEASRIFR 276

Query: 188 RQRL---------TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
             ++           +TY  ++    +   LE+A  L+  M+++    +  +Y++ +  L
Sbjct: 277 DMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGL 336

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            R  K+  + +  + KE+    IE D    N V+ G  K G  S A   +G+    G+ P
Sbjct: 337 IRNGKLLEAWI--VLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILP 394

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL---------------- 342
            T TY+ ++    + G+  EA  +  E+  +   P T   N LL                
Sbjct: 395 DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLL 454

Query: 343 -----KGY--------------VKMGYLKDAEFVVSEMERSG------------------ 365
                KGY                 G L  A  +V+ M   G                  
Sbjct: 455 QKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDT 514

Query: 366 -----VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
                  PD  TYS +I     AGR + A+    EM     +P+S IY   +  +   G+
Sbjct: 515 ISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGK 574

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
               FQVLK+M+  G       YN +I   G  N +       D M  +G+ PD  T+N 
Sbjct: 575 ISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNH 634

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI-------NLLGEQERWEDVKRLL 533
           +++C  + GR + A  + +EM ++G  P  +++ I+I       +     E +E    + 
Sbjct: 635 MLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVC 694

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
           G+  A         YT + +     G+  +A E  E   D++ +             N  
Sbjct: 695 GHKEA--------LYTLMFNELLVGGKVAEAKELFETALDRSFDI-----------GNFL 735

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
              LI+   +D++   A  VL  + + G + D  ++  ++    ++   H
Sbjct: 736 YKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKH 785



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 161/336 (47%), Gaps = 17/336 (5%)

Query: 306 VITALSNSGRTIEAEAVFEELKES--GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           ++T L+ SG   +A + F+ L+ +    +P    YN LLK  ++   ++   ++  +M  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           + V P+ +T++LLI    ++G  E AR +  +M     +PN F +  ++ GY   G   +
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L +M++ G+ P+   YN +I +F K    H A    D+M  +G+ P   T+N+ I 
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 484 CHFKCGRYDRAEELFEEMQ---ERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
                G+   A  +F +MQ   E G   P   TY +M+    ++   E+ K L+  M+  
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
               N+ +Y   +    ++G+  +A   L           + M   G++P   + N +++
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVL-----------KEMLGIGIEPDIYSYNIVMD 369

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              ++   ++A  ++  M  NG+ PD VTY+TL+  
Sbjct: 370 GLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHG 405



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/388 (21%), Positives = 157/388 (40%), Gaps = 50/388 (12%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  ++ +     R      +++++  + + P    +N L+      G+L+DA  +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +M   G  P+E T+ +L+  Y  AG       +L +M      PN+ +Y+ +++ +  
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF-GKYNCLHHAMAAFDRMLSEGI---EP 473
            G+     +++ +M+  G+ P    +N  I    G    L  +    D  + E +    P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF-------------------------- 507
           + IT+  ++    K G  + A+ L + M+    F                          
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 508 ---------PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
                    P   +YNI+++ L +     D + L+G M   G+LP+ VTY+TL+  Y   
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGY--- 406

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                   C +G   +A N    M ++   P+    N L+++  ++ R +EA  +LQ M 
Sbjct: 407 --------CSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           E G   D VT   ++ AL    +  K  
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAI 486



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 176/409 (43%), Gaps = 45/409 (11%)

Query: 129 WHSLLKNLCSSNSSI---DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           + +LL   CS        +L + ++S     N C       ++L+H+L +  ++ EA  L
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMIS-----NNCSPNTYTCNVLLHSLWKEGRISEAENL 453

Query: 186 SQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQ------------------- 221
            Q+       +  +T N +I+A   N  L+KA+ +++ M                     
Sbjct: 454 LQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDD 513

Query: 222 --DGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
              G  C  D + YS +I  L +  ++D +  +K + E+    ++ D  + +  I  F +
Sbjct: 514 TISGKKCTPDLVTYSTIISGLCKAGRLDDA--KKKFIEMMSKGLQPDSAIYDTFIHSFCR 571

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S A + L   +  G +    TY ++I  L +  +  E   + +E++E G+ P    
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCT 631

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK-EM 396
           YN +L    + G + DA  V+ EM + G+ P+  ++ +LI A+  A  ++++  V +  +
Sbjct: 632 YNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIAL 691

Query: 397 EVSHAKPN--SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            V   K    + +++ +L G    G+     ++ +       +     Y  +ID   K  
Sbjct: 692 NVCGHKEALYTLMFNELLVG----GKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDE 747

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            L  A     R++ +G + D  ++  +ID   K G    A+EL E M E
Sbjct: 748 KLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMME 796


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 215/475 (45%), Gaps = 36/475 (7%)

Query: 125 PAP-LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE--LLYSILIHALGRSEKLYE 181
           P+P +++SL+   C S    D AYA    L+K   C      ++Y+ILI  +  SE+  +
Sbjct: 110 PSPRIFNSLVHAYCRSG---DYAYAY-KLLKKMVQCGCQPGYVVYNILIGGICSSEEPGK 165

Query: 182 AFL-LSQRQRLTPLTYNALI--------SACARN-DDLEKALNLMSKMRQDGYHCDFINY 231
             L L+++     L    ++        S C       EKA N++ +M   G+  D   Y
Sbjct: 166 DVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTY 225

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S VI  L   +K++ +   +L++E++ + I  D  +   +I  F KAG   +A  +    
Sbjct: 226 SKVIGYLCNASKVEKAF--QLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G +P   TY A+I A   S +  +A  V+E +   G  P    Y AL+ G  K G +
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 352 KDAEFVVSEMERSGVL-----------------PDEHTYSLLIDAYANAGRWESARIVLK 394
           + A  +   M++  V                  P+  TY  L+D    A + + AR +LK
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
            M V   +PN  +Y  ++ G    G+     +V   M   G +P+ + Y+ +ID   K  
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            L  A+    +ML     P+ + +  +ID   K G+ D A +L   M+E+G  P   TY 
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
            MI+  G+  R E    LL  M ++G  PN VTY  L++    +G  D+A + LE
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/509 (23%), Positives = 228/509 (44%), Gaps = 49/509 (9%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMR 220
           E       H+L +S K  EA  L +++   P T  Y  +IS        E+A++ +++MR
Sbjct: 10  EFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMR 69

Query: 221 QDGYHCDFINYSLVI------QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
                 + + Y +++      + L R  +I S ++         +      ++ N ++  
Sbjct: 70  ASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMIT--------EGCYPSPRIFNSLVHA 121

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS---GRTIE--AEAVFEELKES 329
           + ++GD + A + L      G  P    Y  +I  + +S   G+ +   AE  + E+ E+
Sbjct: 122 YCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEA 181

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+       +   +    +G  + A  V+ EM   G +PD  TYS +I    NA + E A
Sbjct: 182 GVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKA 241

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + +EM+ +   P+ ++Y+ ++  +   G  ++      EM+  G  P+   Y  +I  
Sbjct: 242 FQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG---- 505
           + K   +  A   ++ MLS+G  P+ +T+  LID   K G+ ++A ++++ M++      
Sbjct: 302 YLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIP 361

Query: 506 ----YF---------PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
               +F         P   TY  +++ L +  + ++ + LL +M  +G  PN V Y  L+
Sbjct: 362 DVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALI 421

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           D   ++G+ D+A E            F  M   G  P+    +SLI+   +D+R   A  
Sbjct: 422 DGCCKAGKLDEAQE-----------VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           VL  M EN   P+VV YT ++  L +V K
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGK 499



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 21/354 (5%)

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           T      +L  SG+  EA ++ E  KE    P T  Y  ++ G  +    ++A   ++ M
Sbjct: 12  TLGCFAHSLCKSGKWREALSLLE--KEE-FVPDTVLYTKMISGLCEASLFEEAMDFLTRM 68

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
             S  LP+  TY +L+    N  +    + +L  M      P+  I++ ++  Y   G++
Sbjct: 69  RASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDY 128

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTF------GKYNCLHHAMAAFDRMLSEGIEPDT 475
              +++LK+M   G +P    YN++I         GK + L  A  A+  ML  G+  + 
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGK-DVLDLAEKAYGEMLEAGVVLNK 187

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +  +    C    G++++A  +  EM  +G+ P T+TY+ +I  L    + E   +L   
Sbjct: 188 VNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQE 247

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M+  G+ P+V  YTTL+D +           C  G  +QA N F  M  DG  P+ +   
Sbjct: 248 MKRNGIAPDVYVYTTLIDSF-----------CKAGFIEQARNWFDEMERDGCAPNVVTYT 296

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +LI+A+ + ++ ++A  V + M   G  P++VTYT L+  L +  K  K    Y
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIY 350



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/503 (24%), Positives = 218/503 (43%), Gaps = 35/503 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS +I  L  + K+ +AF L Q   R  + P    Y  LI +  +   +E+A N   +M 
Sbjct: 225 YSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME 284

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +DG   + + Y+ +I +  ++ K+  +   ++Y+ +       +      +I G  KAG 
Sbjct: 285 RDGCAPNVVTYTALIHAYLKSRKVSKA--NEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 281 ASKAMRFLGMAQ-----------------GVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
             KA +   + +                 G    P   TY A++  L  + +  EA  + 
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + +   G +P    Y+AL+ G  K G L +A+ V + M   G  P+ +TYS LID     
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
            R + A  VL +M  +   PN  IY+ ++ G    G+    ++++  M+  G  P+   Y
Sbjct: 463 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTY 522

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
             MID FGK   +   +    +M S+G  P+ +T+  LI+     G  D A +L EEM++
Sbjct: 523 TAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
             +      Y  +I   G    +     L   +     +P    Y  L+D + ++GR + 
Sbjct: 583 TYWPRHVAGYRKVIE--GFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEI 640

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A+E  E LS  + + F           N+ + +LI       +  +AF +   M   G  
Sbjct: 641 ALELNEELS--SFSPFSAAN------QNIHI-TLIENLSLAHKADKAFELYADMISRGSI 691

Query: 624 PDVVTYTTLMKALIRVDKFHKVF 646
           P++     L+K L+RV+++ +  
Sbjct: 692 PELSILVHLIKGLLRVNRWEEAL 714



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 120/566 (21%), Positives = 219/566 (38%), Gaps = 103/566 (18%)

Query: 68  EEDDDDVLSLQKQRY----DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRA 123
           EE   DVL L ++ Y    +   +LN ++ ++ S     +     + N +   +++ +  
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGF-- 218

Query: 124 VP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKL 179
           +P    +  ++  LC++ S ++ A+ +   ++++ +    Y Y  L      A G  E+ 
Sbjct: 219 IPDTSTYSKVIGYLCNA-SKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA-GFIEQA 276

Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
              F   +R    P  +TY ALI A  ++  + KA  +   M   G   + + Y+ +I  
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIEL----------DGQ-------LLNDVIVGFAKAGD 280
           L +  KI+ +   ++YK ++ + +E+          DG            ++ G  KA  
Sbjct: 337 LCKAGKIEKA--SQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQ 394

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   L      G  P    Y A+I     +G+  EA+ VF  + E G  P    Y++
Sbjct: 395 VKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSS 454

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+    K   L  A  V+S+M  +   P+   Y+ +ID     G+ + A  ++  ME   
Sbjct: 455 LIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG 514

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++ G+   G  ++  ++L++M S G  P+   Y V+I+       L  A 
Sbjct: 515 CNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAH 574

Query: 461 AAFDRM--------------LSEGI---------------EPDTI----TWNTLIDCHFK 487
              + M              + EG                E D++     +  LID   K
Sbjct: 575 KLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIK 634

Query: 488 CGRY-------------------------------------DRAEELFEEMQERGYFPCT 510
            GR                                      D+A EL+ +M  RG  P  
Sbjct: 635 AGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPEL 694

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNM 536
           +    +I  L    RWE+  +LL ++
Sbjct: 695 SILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 204/434 (47%), Gaps = 9/434 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P+ +  S+L N  +    +  A++++  + K        +L + L+  L    ++ EA  
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRIL-TTLMKGLCLKGRVLEAVS 161

Query: 185 LSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L         R   + Y  +I+   +      A+ +  KM++   + + I Y+ VI  L 
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSP 298
           +   +D +    L  E+  + IELD    N +I GF   G    A++ L  M     + P
Sbjct: 222 KQGLVDEAC--GLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYP 279

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              T+  +I  L   GR  EA  V   + + G KP   +YNAL+ GY   G + +A+ V 
Sbjct: 280 DVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVF 339

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M     LP+  +Y  LI+ Y      + A ++L EM   +  P++  Y+ +L G    
Sbjct: 340 DKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKS 399

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G     + +++ M++SG   D   YNV++D + K+     A+A F  ++  GI P+  T+
Sbjct: 400 GRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTY 459

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N L+D   K GR   A+E+F+ +  +G  P   TYNIMI+ L ++   ++ + LL  M  
Sbjct: 460 NILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVN 519

Query: 539 QGLLPNVVTYTTLV 552
              LPN +T+ T+V
Sbjct: 520 NNYLPNYITFDTIV 533



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 210/457 (45%), Gaps = 16/457 (3%)

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           +L  +  + P  +T++ LI+A A+   +  A +L+  + + G+  D    + +++ L   
Sbjct: 94  ILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLK 153

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            ++  ++   L  E        D      +I G  K G    A++     + + + P   
Sbjct: 154 GRVLEAV--SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLI 211

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
            Y  VI  L   G   EA  +  E+ E+G++    +YN+++ G+  +G  + A  ++ EM
Sbjct: 212 MYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEM 271

Query: 362 E-RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
             R  V PD +T+++LID     GR   A  V+  M     KP+   Y+ ++ GY   G 
Sbjct: 272 VVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS 331

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                QV  +M      P+   Y  +I+ + K   +  AM     M ++ + PDT+T+N 
Sbjct: 332 VGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNC 391

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           L+D   K GR     +L E M+  G      TYN++++   + E+++    L  ++   G
Sbjct: 392 LLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIG 451

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + PN+ TY  L+D   +SGR   A E            F+++   G +P+    N +I+ 
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKE-----------IFQLLSAKGCQPNIRTYNIMIHG 500

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
             ++    EA A+L  M  N   P+ +T+ T+++A++
Sbjct: 501 LCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 193/418 (46%), Gaps = 26/418 (6%)

Query: 228 FINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM 285
            I +S++I +  +  ++    SLL  + K       ++D ++L  ++ G    G   +A+
Sbjct: 105 LITFSILINAFAQLGQMGFAFSLLGNILKM----GFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 286 RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
             L      G       Y  +I  L   G+T +A  +F ++K+  + P    YN ++ G 
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV-SHAKPN 404
            K G + +A  + +EM  +G+  D ++Y+ +I  + + GR+++A  +L EM V     P+
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            + ++ ++ G    G     + V+  M   G +PD   YN +++ +     +  A   FD
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           +M+     P+ I++ TLI+ + K    D A  L  EM  +   P T TYN +++ L +  
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 525 R----WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           R    W+    L+  MRA G   +++TY  L+D Y +  +FD A+   + + +       
Sbjct: 401 RSLYEWD----LVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI------ 450

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                G+ P+    N L++   +  R   A  + Q +   G +P++ TY  ++  L +
Sbjct: 451 -----GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 12/355 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           + P   T++ +I A +  G+   A ++   + + G +   +    L+KG    G + +A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++ E    G   DE  Y  +I+     G+   A  +  +M+     PN  +Y+ ++ G 
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPD 474
             +G       +  EM  +G+E D + YN MI  F        A+   D M+  G + PD
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+N LID   K GR   A  +   M +RG+ P   +YN ++N         + K++  
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M  +  LPNV++Y TL++ Y           C   + D+A+     M    L P  +  
Sbjct: 341 KMVERTALPNVISYCTLINGY-----------CKVRMVDEAMVLLTEMHNKNLVPDTVTY 389

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           N L++   +  R    + +++ M+ +G   D++TY  L+    + +KF K  + +
Sbjct: 390 NCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALF 444



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 19/307 (6%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSE----MERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
           +N LL   +K   LK    VVS       +  + P   T+S+LI+A+A  G+   A  +L
Sbjct: 72  FNKLLSTLIK---LKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLL 128

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
             +     + +  I + ++ G   +G       +L E    G   D   Y  +I+   K 
Sbjct: 129 GNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKI 188

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
                A+  F +M    + P+ I +NT+ID   K G  D A  L  EM E G      +Y
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQG-LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           N MI+      R++   +LL  M  +G + P+V T+  L+D   + GR            
Sbjct: 249 NSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVS---------- 298

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A N   VM   G KP  ++ N+L+N +       EA  V   M E    P+V++Y TL
Sbjct: 299 -EAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357

Query: 633 MKALIRV 639
           +    +V
Sbjct: 358 INGYCKV 364


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 197/457 (43%), Gaps = 14/457 (3%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T  TY+ LI  C R   L+ A      + + G   D I  S +++ L    + D ++   
Sbjct: 102 TVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVL 161

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA--QGVGLSPKTATYAAVITA 309
            ++  E   +  D    + V+      G +  A+  L MA  QG G       Y+ V+  
Sbjct: 162 FHRMPELGCVP-DAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L   G+  EA  +F E+ + G+ P    YN+++    K   +  A+ ++ +M  +GV PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY+ LI  Y+  G+W+ A  + KEM      PN+   S  +A     G  +   +   
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M + G + +   Y+ ++  +    CL      F+ M+ +GI P+   +N L++ + KCG
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
               A  +FE+MQ+RG  P   TY  +I+        +D      +M  +G+ PN   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L+  +           C  G   +A      +R  GL P  L+  SLIN   ++ R  E
Sbjct: 461 CLIQGF-----------CTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           A  +   +   G K DV  +T+L+     + K  + F
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF 546



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 236/548 (43%), Gaps = 35/548 (6%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A+P    +S+L + C     +DLA+A    L +  +  +  ++ S L+  L  +++  EA
Sbjct: 99  ALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGM-KADVIVVSSLLRGLCDAKRTDEA 157

Query: 183 F-LLSQRQ---RLTP--LTYNALISACARNDDLEKALNL--MSKMRQDGYHCDFINYSLV 234
             +L  R       P  ++Y+ ++ +   +   + AL++  M+  +  G  C+ + YS V
Sbjct: 158 VDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTV 217

Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +  L +  K+  +    L+ E+    +  +    N VI    KA    KA   L    G 
Sbjct: 218 VHGLFKEGKVGEAC--DLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGN 275

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G+ P   TY  +I   S  G+  +A  +F+E+   G+ P T   +  +    K G +++A
Sbjct: 276 GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEA 335

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                 M   G   +  +YS L+  YA AG       +   M      PN  +++ ++ G
Sbjct: 336 REFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNG 395

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y   G  +    + ++M+  G+ PD   Y  +I  F +   +  AM  F+ M+ +G+EP+
Sbjct: 396 YAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
              +  LI      G   +AEEL  E++ +G  PC  ++  +IN L ++ R  + +R+  
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFD 515

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEG 570
            +   G   +V  +T+L+D Y   G+  +A                          C  G
Sbjct: 516 MIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNG 575

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
             D  +  FR +   G+KP+      +++      R A A  + Q M E+G+   + TY+
Sbjct: 576 RIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYS 635

Query: 631 TLMKALIR 638
            L+  L R
Sbjct: 636 ILLTGLCR 643



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 12/396 (3%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS L+H    +  L +    F L  R  + P    +N L++  A+   + +A+ +   M+
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G + D + Y  VI +  R   +D ++  K    I+   +E +  +   +I GF   GD
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAM-DKFNHMID-KGVEPNFAVYQCLIQGFCTHGD 471

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             KA   +   +  GL P   ++A++I  L   GR  EA+ +F+ +  +G K     + +
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY  +G + +A  V   M   G+ PD  TY  L++     GR +   I+ +E+    
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP +F Y  IL G    G      ++ +EM  SG+      Y++++    + NC   A+
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAI 651

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F ++ +  ++ D +  N +I   FK  R + AE LF  + + G  P   TY IM+  L
Sbjct: 652 TVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711

Query: 521 GEQERWEDVKRLLGNMRAQGLLP-----NVVTYTTL 551
            ++   E+ + +   M   GL P     NV+  T L
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLL 747



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 229/522 (43%), Gaps = 55/522 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA---LGRSEKLYEAFLL 185
           ++S++  LC + + +D A  ++  +  + +     + Y+ LIH    LG+ ++    F  
Sbjct: 249 YNSVIHALCKARA-VDKAQGILRQMVGNGV-QPDNVTYNTLIHGYSTLGQWKQAVRMFKE 306

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + + P  +T +  ++   ++  +E+A      M   G+  + I+YS ++        
Sbjct: 307 MTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGC 366

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +    +  L+  +  D I  +  + N ++ G+AK G   +AM      Q  GL+P   TY
Sbjct: 367 LVD--MSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            AVI A    G   +A   F  + + G++P    Y  L++G+   G L  AE +V E+  
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P   +++ LI+     GR   A+ +   +  +  K +  I++ ++ GY   G+   
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSE 544

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F+V   M S G+EPD   Y  +++   K   +   +  F  +L +G++P T T+  ++D
Sbjct: 545 AFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILD 604

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTY------------------------------ 513
             F  GR   A+E+F+EM E G      TY                              
Sbjct: 605 GLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKF 664

Query: 514 -----NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
                NIMI+ + +  R E+ + L  ++   GL+P V TYT ++         ++ I+  
Sbjct: 665 DIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMM---------ENLIK-- 713

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           EG  ++A   F VM   GL P++  +N ++    E     +A
Sbjct: 714 EGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 202/462 (43%), Gaps = 18/462 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+        +E A  L  +M       D + Y ++I       ++++++  KL  
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAV--KLLD 318

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    +E +  +   V+      G  S A+  +       +    A Y  V++   N G
Sbjct: 319 DMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG 378

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             + A   F+E++  GL      Y  L+ G  + G LK+AE V+ EM    +  DE TY+
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYT 438

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+D Y   G+   A  V   M      PN   Y+ +  G   +G+ Q   ++L EM + 
Sbjct: 439 VLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E +   YN +I+   K   L  AM     M + G++PD  T+ TLID   K G  DRA
Sbjct: 499 GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRA 558

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L +EM + G  P   TYN+++N      R E  K+LL  M  + + PN  TY +L+  
Sbjct: 559 HDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQ 618

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y          E  +G+  + V           +P+    N LI    + +   EA    
Sbjct: 619 YCIGNNMKSTTEIYKGMCSRNV-----------EPNENTYNILIKGHCKARSMKEAQYFH 667

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
             M E G +    +Y+ L++ L +  KF  V +  LF ++ K
Sbjct: 668 NEMIEKGFRLTASSYSALIRLLNKKKKF--VEARKLFHDMRK 707



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 181/384 (47%), Gaps = 6/384 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            Y  ++S      DL  A     +M++ G   D + Y+ +I  L R  ++  +  +K+ +
Sbjct: 366 VYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA--EKVLQ 423

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+   ++++D      ++ G+ K G  ++A +        G++P   TY A+   L   G
Sbjct: 424 EMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQG 483

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A  +  E+   GL+     YN+L+ G  K GYL  A   +++M+ +G+ PD +TY+
Sbjct: 484 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYT 543

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LIDA   +G  + A  +L+EM  +  KP    Y+ ++ G+   G  +   ++L+ M   
Sbjct: 544 TLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + P+   YN ++  +   N +      +  M S  +EP+  T+N LI  H K      A
Sbjct: 604 NIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +    EM E+G+    ++Y+ +I LL +++++ + ++L  +MR +G       Y   +D 
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDF 723

Query: 555 YGQSGRFDDAIECLEGLSDQAVNA 578
                  +D +E    L D+ V A
Sbjct: 724 NFN----EDNLEATLALCDELVEA 743



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 216/500 (43%), Gaps = 24/500 (4%)

Query: 135 NLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP- 193
           N   S   +D A  +   L   N+C SY +L  +L  A GR E   + F     +  +P 
Sbjct: 239 NAVLSRLPLDEAIELFQGLPDKNVC-SYNILLKVLCGA-GRVEDARQLF----DEMASPP 292

Query: 194 --LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
             +TY  LI       +LE A+ L+  M   G   +   Y+ V+  L    ++  +L   
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDAL--T 350

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + +++   K+ LD  +   V+ GF   GD   A R+    Q  GL+    TY  +I  L 
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +G   EAE V +E+    L      Y  L+ GY K G + +A  V + M + GV P+  
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+ L D     G  ++A  +L EM     + N+  Y+ ++ G    G   +  + + +M
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            ++G++PD + Y  +ID   K   L  A      ML  GI+P  +T+N L++     GR 
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +  ++L E M E+   P  TTYN ++         +    +   M ++ + PN  TY  L
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  +           C      +A      M   G + +  + ++LI    + ++  EA 
Sbjct: 651 IKGH-----------CKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 612 AVLQYMKENGL--KPDVVTY 629
            +   M++ G   +PDV  +
Sbjct: 700 KLFHDMRKEGFTAEPDVYNF 719



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 141/346 (40%), Gaps = 42/346 (12%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+ L R+ +L EA      +L++R  +  +TY  L+    +   + +A  + + M 
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y+ +   L +   + ++   +L  E+    +EL+    N +I G  KAG 
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAA--NELLHEMSNKGLELNACTYNSLINGLCKAGY 519

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AMR +      GL P   TY  +I AL  SG    A  + +E+ ++G+KP    YN 
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579

Query: 341 LLKGYVKMGY-----------------------------------LKDAEFVVSEMERSG 365
           L+ G+   G                                    +K    +   M    
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           V P+E+TY++LI  +  A   + A+    EM     +  +  YS ++     + ++    
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           ++  +M+  G   +   YN  ID     + L   +A  D ++   I
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 35/247 (14%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L+ ++  G+ P     N ++        L  A+  F  +  + +     ++N L+    
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLP----LDEAIELFQGLPDKNV----CSYNILLKVLC 273

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             GR + A +LF+EM      P   TY I+I+        E+  +LL +M A+G+ PN  
Sbjct: 274 GAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLS------DQAVNA------------------FRVM 582
            YT++V +    GR  DA+  +E +       D+AV                    F  M
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +  GL    +   +LIN         EA  VLQ M    L  D VTYT L+    +  K 
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 643 HKVFSSY 649
            + F  +
Sbjct: 451 AEAFQVH 457


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 232/512 (45%), Gaps = 23/512 (4%)

Query: 146 AYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNAL 199
           A+ V++ + K    ++ Y   ++IL+  L R+ +  +A  L    +R  L P   +YN +
Sbjct: 126 AFGVLALMLKRGFAFNVYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I       +LEKAL L ++M+  G     + + ++I +  +  K+D ++     KE++  
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM--GFLKEMKFM 241

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            +E D  +   +I GF   G+  +           G SP   TY  +I      G+  EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +FE + E G++P    Y  L+ G   +G  K+A  +++ M      P+  TY+++I+ 
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVE 437
               G    A  +++ M+    +P++  Y+ +L G   +G+     ++L  M   SS  +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   YN +I    K N LH A+  +D ++ +    D +T N L++   K G  ++A EL
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++++ +      + TY  MI+   +       K LL  MR   L P+V  Y  L+     
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL-- 539

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C EG  DQA   F  M+ D   P  ++ N +I+   +      A ++L  M
Sbjct: 540 ---------CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              GL PD+ TY+ L+   +++    +  S +
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 20/369 (5%)

Query: 285 MRFLGMAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           MR  G A GV       G +     +  ++  L  +    +A ++  E++ + L P   +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN +++G+ +   L+ A  + +EM+ SG      T+ +LIDA+  AG+ + A   LKEM+
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               + +  +Y+ ++ G+ D GE  R   +  E+   G  P    YN +I  F K   L 
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ M+  G+ P+  T+  LID     G+   A +L   M E+   P   TYNI+I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L +     D   ++  M+ +   P+ +TY  L+              C +G  D+A  
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL-----------CAKGDLDEASK 408

Query: 578 AFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              +M  D     P  ++ N+LI+   ++ R  +A  +   + E     D VT   L+ +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 636 LIRVDKFHK 644
            ++    +K
Sbjct: 469 TLKAGDVNK 477



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 13/352 (3%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +  +L EA     F++ +  R    TY  LI         ++AL L++ M 
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344

Query: 221 QDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +     + + Y+++I  L +   + D+  + +L K+    +   D    N ++ G    G
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK---RRTRPDNITYNILLGGLCAKG 401

Query: 280 DASKAMR--FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES-GLKPRTK 336
           D  +A +  +L +       P   +Y A+I  L    R  +A  +++ L E  G   R  
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             N LL   +K G +  A  +  ++  S ++ +  TY+ +ID +   G    A+ +L +M
Sbjct: 462 T-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            VS  +P+ F Y+ +L+     G   + +++ +EM+     PD   +N+MID   K   +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             A +    M   G+ PD  T++ LI+   K G  D A   F++M + G+ P
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 16/302 (5%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I+ L +   + +A      +  +R R   +TYN L+       DL++A  L+  M 
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414

Query: 221 QDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA-K 277
           +D  + D   I+Y+ +I  L + N++  +L   +Y ++  +K+    ++  ++++    K
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQAL--DIY-DLLVEKLGAGDRVTTNILLNSTLK 471

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGD +KAM          +   + TY A+I     +G    A+ +  +++ S L+P    
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN LL    K G L  A  +  EM+R    PD  +++++ID    AG  +SA  +L  M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P+ F YS+++  +   G          +M  SG EPD H    + D+  KY C+ 
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKY-CIS 646

Query: 458 HA 459
             
Sbjct: 647 QG 648



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 5/406 (1%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           L R + L++  +L +      +TYN LI    +   L++A  +   M + G   +   Y+
Sbjct: 263 LDRGKALFDE-VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L    K   +L Q L   IE D+ E +    N +I    K G  + A+  + + +
Sbjct: 322 GLIDGLCGVGKTKEAL-QLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMK 379

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESG-LKPRTKAYNALLKGYVKMGY 350
                P   TY  ++  L   G   EA + ++  LK+S    P   +YNAL+ G  K   
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L  A  +   +       D  T ++L+++   AG    A  + K++  S    NS  Y+ 
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+   G       +L +M+ S ++P    YN ++ +  K   L  A   F+ M  + 
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD +++N +ID   K G    AE L   M   G  P   TY+ +IN   +    ++  
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
                M   G  P+     +++      G  D   E ++ L D+ +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 11/330 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
           A  ++ ++  LC      D A  +V  ++K        + Y+IL+  L     L EA   
Sbjct: 352 AVTYNIIINKLCKDGLVAD-AVEIVELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKL 409

Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              +L       P  ++YNALI    + + L +AL++   + +     D +  ++++ S 
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +   ++ ++  +L+K+I   KI  +      +I GF K G  + A   L   +   L P
Sbjct: 470 LKAGDVNKAM--ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y  ++++L   G   +A  +FEE++     P   ++N ++ G +K G +K AE ++
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M R+G+ PD  TYS LI+ +   G  + A     +M  S  +P++ I   +L     +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           GE  +  +++K++    +  D      ++D
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMD 677



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 27/214 (12%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLID--C-HFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A      ML  G   +    N L+   C + +CG+   A  L  EM+     P   +YN 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNT 182

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I    E +  E    L   M+  G   ++VT+  L+D + ++G+ D           +A
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD-----------EA 231

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +   + M+  GL+   +   SLI  F +        A+   + E G  P  +TY TL++ 
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 636 LIRVDKFHKVFSSYLFF-------NIYKMLSYSG 662
             ++ +  +    + F        N+Y   +Y+G
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVY---TYTG 322


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 223/505 (44%), Gaps = 65/505 (12%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           + +P  ++ ++        ++ AL++   M + G           + SL   N++ SSL+
Sbjct: 145 KFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLG----------CVPSLRSCNRLLSSLV 194

Query: 250 QK--------LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           +K        +Y  I    I  D    + ++  + K G  + A+ F+     +G      
Sbjct: 195 RKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVV 254

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY ++I    + G    AE V + + E G+         L+KGY +   L++AE V+ EM
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 362 ERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           ERS G++ DE+ Y +LID Y    + + A  +  EM     + N FI + ++ GY   G+
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE-------- 472
                ++L  M    +EP+++ Y+ ++D F +   +  A++ ++ ML  GI+        
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNS 434

Query: 473 ---------------------------PDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
                                      PD +++ TL+D  FK G + RA  L+ ++  RG
Sbjct: 435 LLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           Y   T  +N MIN   + E+  + +     M+  G  P+ VTY TL+D Y + G  ++A 
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
           +  E +  +A+            PS    NSLI    + ++  E   +L  M   GL P+
Sbjct: 555 KVKEKMEKEAI-----------LPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603

Query: 626 VVTYTTLMKALIRVDKFHKVFSSYL 650
           VVTY TL+       +  K F++Y 
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYF 628



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 203/428 (47%), Gaps = 14/428 (3%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  +TYN+LI  C    D+E+A  ++  M + G   + +  +L+I+   R  K++ +  +
Sbjct: 251 LNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEA--E 308

Query: 251 KLYKEIE-CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           K+ +E+E  + + LD      +I G+ +      A+R       VGL        A+I  
Sbjct: 309 KVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALING 368

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
              +G+  EAE +   + +  L+P + +Y+ L+ G+ + G +  A  V +EM R G+  +
Sbjct: 369 YCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSN 428

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             T++ L+      G +E A  V   M      P+   Y  +L      GE+ R   +  
Sbjct: 429 VVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWN 488

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           ++ + G    T+ +N MI+ F K   +  A   F+RM   G EPD +T+ TLID + K G
Sbjct: 489 DILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG 548

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             + A ++ E+M++    P    YN +I  L + ++  +V  LL  M  +GL PNVVTY 
Sbjct: 549 NVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYG 608

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+           A  C EG  D+A  A+  M   G  P+ +  + ++++     R  E
Sbjct: 609 TLI-----------AGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDE 657

Query: 610 AFAVLQYM 617
           A  +LQ M
Sbjct: 658 ANMLLQKM 665



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 217/527 (41%), Gaps = 66/527 (12%)

Query: 184 LLSQRQRL-TPLTYNALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRT 241
           L+ +R  L   +T   LI    R   LE+A  ++ +M R +G   D   Y ++I    R 
Sbjct: 278 LMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRV 337

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            K+D ++  +L  E+    + ++  + N +I G+ K G  S+A R L       L P++ 
Sbjct: 338 CKMDDAV--RLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESY 395

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y+ ++      G   +A +V+ E+   G++     +N+LLKG  ++G  +DA  V   M
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM 455

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            + GV PDE +Y  L+D     G +  A  +  ++       +++ ++ ++ G+    + 
Sbjct: 456 LKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKM 515

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
               +    MK  G EPD   Y  +ID + K   +  A    ++M  E I P    +N+L
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSL 575

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I   FK  +     +L  EM  +G  P   TY  +I    ++ R +       +M  +G 
Sbjct: 576 IGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635

Query: 542 LPNVVTYTTLV----------------------DIYGQSGRFD----------------D 563
            PNV+  + +V                      D++   G FD                D
Sbjct: 636 APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIAD 695

Query: 564 AIE---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
            ++                     C  G  D A   F  +   G  P N    +LI+ + 
Sbjct: 696 TLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYS 755

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
                 +AF++   M + GL P+++TY  L+  L +   +D+  K+F
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLF 802



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 204/487 (41%), Gaps = 48/487 (9%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+N+L+    R    E AL++   M + G   D ++Y  ++  L +  +   +L   L+
Sbjct: 430 VTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL--ALW 487

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +I            N +I GF K     +A       + +G  P   TY  +I      
Sbjct: 488 NDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKL 547

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   EA  V E++++  + P  + YN+L+ G  K    ++   ++SEM   G+ P+  TY
Sbjct: 548 GNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTY 607

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA-------------------- 413
             LI  + + GR + A     +M      PN  I S+I++                    
Sbjct: 608 GTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVN 667

Query: 414 -------GYRDRG--------EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                  GY DR         + Q+    L E   S   P++  YN+ I    K   +  
Sbjct: 668 LDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDD 727

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A   F  +L  G  PD  T+ TLI  +   G  + A  L +EM +RG  P   TYN +IN
Sbjct: 728 AKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALIN 787

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +    +  ++L   +  +GL PNV++Y  L+D Y           C  G + +A++ 
Sbjct: 788 GLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGY-----------CKNGNTREALDL 836

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M  +G+ PS +  ++LI  F +     +A  +L  M+E     ++  +  L++  ++
Sbjct: 837 RNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVK 896

Query: 639 VDKFHKV 645
             +  K+
Sbjct: 897 CGEVKKI 903



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 209/461 (45%), Gaps = 17/461 (3%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----L 184
           +SLLK LC   +  D A  V   + K  +    E+ Y  L+  L +  + + A      +
Sbjct: 433 NSLLKGLCRVGAFED-ALHVWHLMLKRGVTPD-EVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           L++    +   +N +I+   + + + +A    ++M++ G+  D + Y  +I    +   +
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           + +   K+ +++E + I    +L N +I G  K+    + M  L      GLSP   TY 
Sbjct: 551 EEAF--KVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYG 608

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I    + GR  +A   + ++ E G  P     + ++    ++G + +A  ++ +M   
Sbjct: 609 TLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNL 668

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARI--VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
            V  D   +  L    A+ G  +S +I   L E   S + PNS +Y+  +AG    G+  
Sbjct: 669 DVFLDHGYFDRL--HKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVD 726

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
              ++   +   G  PD   Y  +I  +     ++ A +  D ML  G+ P+ IT+N LI
Sbjct: 727 DAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALI 786

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +   K G  DRA++LF+++  +G  P   +YNI+I+   +     +   L   M  +G+ 
Sbjct: 787 NGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGIS 846

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECL----EGLSDQAVNAF 579
           P+++TY+ L+  + + G    A   L    E  +DQ +  F
Sbjct: 847 PSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKF 887



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 171/401 (42%), Gaps = 39/401 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +L+   C    +++ A+ V   ++K  +  S EL Y+ LI  L +S+K  E   LLS+
Sbjct: 537 YRTLIDGYCKL-GNVEEAFKVKEKMEKEAILPSIEL-YNSLIGGLFKSKKTREVMDLLSE 594

Query: 188 R--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + L+P  +TY  LI+       L+KA      M + G+  + I  S ++ SL R  +
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGR 654

Query: 244 IDSS--LLQKLY------------KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           ID +  LLQK+             +  + D   LD Q + D +       ++SK+     
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTL------DESSKSFSL-- 706

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                   P +  Y   I  L  SG+  +A+ +F  L   G  P    Y  L+ GY   G
Sbjct: 707 --------PNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAG 758

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            + DA  +  EM + G+ P+  TY+ LI+    +G  + A+ +  ++ +    PN   Y+
Sbjct: 759 NVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYN 818

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ GY   G  +    +  +M   G+ P    Y+ +I  F K   +  A    D M   
Sbjct: 819 ILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMREL 878

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
             + +   +  L++ H KCG   +  +L   M      PC 
Sbjct: 879 FADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHIT--IPCA 917


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 213/467 (45%), Gaps = 33/467 (7%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
           +N L+SA A+ +  E  ++L  +M+  G   D   YS+ I    R +++  +L  L K+ 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       E D   L+ ++ G+  +   S A+  +     +G  P T T+  +I  L   
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +  EA A+ +++ + G +P    Y  ++ G  K G +  A  ++++ME + +  +   +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +ID+       E A  +  EME    +PN   Y+ ++    + G W    ++L  M  
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             + P+   +N +ID F K   L  A    + M+   I+PDTIT+N LI+      R D 
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A+++F+ M  +   P   TYN +IN   + +R ED   L   M  +GL+ N VTYTT++ 
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
            + Q+G  D A                          C  G  D A+  F+ ++   ++ 
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +    N++I    +  +  EA+ +   +    +KPDVVTY T++  L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 222/500 (44%), Gaps = 39/500 (7%)

Query: 162 YELLYSI--LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +EL+ S+   +  LG S  LY              TY+  I+   R   L  AL +++KM
Sbjct: 99  FELVISLGEQMQTLGISHDLY--------------TYSIFINCFCRRSQLSLALAVLAKM 144

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + GY  D +  S ++     + +I  ++   L  ++     + D      +I G     
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAV--ALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
            AS+A+  +      G  P   TY  V+  L   G    A  +  +++ + +K     +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++    K  +++ A  + +EME  G+ P+  TY+ LI+   N GRW  A  +L  M   
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              PN   ++ ++  +   G+     ++ +EM    ++PDT  YN++I+ F  +N L  A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M+S+   P+  T+NTLI+   KC R +   ELF EM +RG    T TY  +I  
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-------------- 565
             +    +  + +   M +  +  +++TY+ L+      G+ D A+              
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502

Query: 566 -----ECLEGL--SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                  +EG+  + +   A+ +  +  +KP  +  N++I+     +   EA  + + MK
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562

Query: 619 ENGLKPDVVTYTTLMKALIR 638
           E+G  P+  TY TL++A +R
Sbjct: 563 EDGTLPNSGTYNTLIRANLR 582



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 31/552 (5%)

Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
           L S+ + +N+ E  ++   +     + H     S+  N     S + LA AV++ + K  
Sbjct: 89  LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146

Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
           L Y  +++  S L++    S+++ +A  L  +      +    T+  LI     ++   +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           A+ L+ +M Q G   D + Y  V+  L +   ID +L   L  ++E  +I+ +  + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--NLLNKMEAARIKANVVIFNTI 264

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I    K      A+      +  G+ P   TY ++I  L N GR  +A  +   + E  +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    +NAL+  + K G L +AE +  EM +  + PD  TY+LLI+ +    R + A+ 
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           + K M      PN   Y+ ++ G+      +   ++ +EM   G+  +T  Y  +I  F 
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           +      A   F +M+S  +  D +T++ L+      G+ D A  +F+ +Q+        
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
            YN MI  + +  +  +   L  ++  +   P+VVTY T++     SG       C + L
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMI-----SGL------CSKRL 550

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
             +A + FR M+ DG  P++   N+LI A   D   A +  +++ M+ +G   D  T + 
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610

Query: 632 LMKALI--RVDK 641
           +   L   R+DK
Sbjct: 611 VTNMLHDGRLDK 622



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 24/365 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +++A++   +     ++ E+++  G+      Y+  +  + +   L  A  V
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +++M + G  PD  T S L++ Y ++ R   A  ++ +M     KP++F ++ ++ G   
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
             +      ++ +M   G +PD   Y  +++   K   +  A+   ++M +  I+ + + 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NT+ID   K    + A +LF EM+ +G  P   TYN +IN L    RW D  RLL NM 
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
            + + PNVVT+  L+D + + G+  +A +                        C+    D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A   F+ M +    P+    N+LIN F + +R  +   + + M + GL  + VTYTT++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440

Query: 634 KALIR 638
           +   +
Sbjct: 441 QGFFQ 445



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 20/343 (5%)

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGV 366
           LS+  +  +A  +F ++ +S   P    +N LL    KM      E V+S   +M+  G+
Sbjct: 58  LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF---ELVISLGEQMQTLGI 114

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             D +TYS+ I+ +    +   A  VL +M     +P+    S +L GY           
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           ++ +M   G +PDT  +  +I     +N    A+A  D+M+  G +PD +T+ T+++   
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G  D A  L  +M+          +N +I+ L +    E    L   M  +G+ PNVV
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY +L++     GR+ DA   L  + ++ +N           P+ +  N+LI+AF ++ +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKIN-----------PNVVTFNALIDAFFKEGK 343

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
             EA  + + M +  + PD +TY  L+       R+D+  ++F
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)

Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           ER +   +  Y  I+ N L +  + +D   L G+M      P++V +  L+    +  +F
Sbjct: 40  ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
           +  I   E     G+S         +N F              ++M+  G +P  + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           L+N +   +R ++A A++  M E G KPD  T+TTL+  L
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 179/369 (48%), Gaps = 1/369 (0%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++ ++  L  +++N +++   +   L +A +++  M+  G   + I Y+ +I    +  +
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 244 IDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           I        + KE+    I  +    N +I GF K  + S AMR  G  Q  GL P   T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I  L + G+  EA A+ +++  S L+P    +N L+ G+ K   + +A  + ++ME
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           + GV P+  TY+ LIDAY   GR E A  +   M      P    Y+ ++AG   +G+ +
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
               ++ EM S  +  D   YN++ID+  K      A+   D M  +G+ P  +T+NTL+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           D + + G    A  +   M+ +G      T+N++I     + R ED   LL  M  +GL+
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505

Query: 543 PNVVTYTTL 551
           PN  TY  +
Sbjct: 506 PNRTTYEII 514



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 238/533 (44%), Gaps = 41/533 (7%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKH-NLCYSYELLYSILIHALGRSEK------LYEAFL 184
           LL+ L +S +  +L     +W QK   L +S EL + IL ++L  ++K        + F+
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSHSLELTFRIL-NSLAHTKKYSKIRSFLDKFV 59

Query: 185 LSQRQRLTPLTYNA-----------------LISACARNDDLEKALNLMSKMRQDGYHCD 227
             ++       ++A                 L+ A  RN  + +      +    G+   
Sbjct: 60  KYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLS 119

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I+ + ++  L + +  ++  ++ +Y+E+   KIEL+    N V+ G  K G  ++A   
Sbjct: 120 LISCNPLLSGLVKES--ENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRT---IEAEAVFEELKESGLKPRTKAYNALLKG 344
           +   +  G+SP   TY  +I      GR     +A+A+ +E+   G+ P    YN L+ G
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           + K   +  A  V  EM+R G+ P+  TY++LI+   + G+ + A  +  +M  S  +PN
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              ++ ++ G+           +  +M+  GV+P+   Y  +ID + K   +  A A ++
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN 357

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M+  GI P+  T+N LI    + G    A  L  EM  +       TYNI+I+ L ++ 
Sbjct: 358 MMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKG 417

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
                 +LL  M  +GL P+ VTY TL+D Y           C EG    A+     M  
Sbjct: 418 ESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY-----------CREGNLRAALIVRTRMER 466

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            G + + +  N LI  F    R  +A  +L  M E GL P+  TY  + + ++
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMM 519



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 27/360 (7%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ A   + + +     F+   + G K    + N LL G VK     D EFV  EM +  
Sbjct: 91  LVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRK 150

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +  +  +++++++     G+   A  V+++M+V    PN   Y+ ++ GY   G   + +
Sbjct: 151 IELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMY 210

Query: 426 Q---VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   +LKEM + G+ P+   YN++ID F K   +  AM  F  M  +G+ P+ +T+N LI
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILI 270

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +     G+ D A  L ++M      P   T+N++IN   + +   +   L  +M  QG+ 
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNA 578
           PN +TYTTL+D Y + GR +DA                          C +G    A + 
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              M +  L    +  N LI++  +     +A  +L  M E GL P  VTY TLM    R
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCR 450



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 14/226 (6%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V +EM    +E +   +N++++   K   L+ A    + M   G+ P+ IT+NTLID + 
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 487 KCGRYDR---AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
           K GR  +   A+ + +EM  +G  P   TYNI+I+   + E      R+ G M+ QGL P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           NVVTY  L++     G+ D+A+     L DQ V++        L+P+ +  N LIN F +
Sbjct: 262 NVVTYNILINGLCSDGKVDEAV----ALRDQMVSS-------DLEPNVVTHNVLINGFCK 310

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           ++   EA  +   M++ G+ P+ +TYTTL+ A  +  +    F+ Y
Sbjct: 311 NKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 209/456 (45%), Gaps = 24/456 (5%)

Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           R  KL++A      ++  R   + + +N L+SA  +    +  ++L  KM   G   D  
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 230 NYSLVIQSLTRTNKIDSSL--LQKLYK-EIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
            +++VI       ++  +L  L K+ K   E D++ + G L+N    GF +    S A+ 
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTI-GSLVN----GFCRRNRVSDAVS 176

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            +     +G  P    Y A+I +L  + R  +A   F+E+   G++P    Y AL+ G  
Sbjct: 177 LVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLC 236

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G   DA  ++ +M +  + P+  TYS L+DA+   G+   A+ + +EM      P+  
Sbjct: 237 NSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV 296

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            YS ++ G           Q+   M S G  PD   YN +I+ F K   +   M  F +M
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM 356

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              G+  +T+T+NTLI   F+ G  D+A+E F +M   G  P   TYNI++  L +    
Sbjct: 357 SQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLL 416

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E    +  +M+   +  ++VTYTT++    ++G+ +DA     GL       F  +   G
Sbjct: 417 EKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA----WGL-------FCSLSLKG 465

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           LKP  +   ++++         E  A+   MK+ GL
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 24/380 (6%)

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
           +G+     T+  VI       +   A +V  ++ + G +P      +L+ G+ +   + D
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +V +M   G  PD   Y+ +ID+     R   A    KE+     +PN   Y+ ++ 
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           G  + G W    ++L++M    + P+   Y+ ++D F K   +  A   F+ M+   I+P
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D +T+++LI+      R D A ++F+ M  +G FP   +YN +IN   + +R ED  +L 
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
             M  +GL+ N VTY TL+  + Q G  D A E                        C  
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
           GL ++A+  F  M+   +    +   ++I    +  +  +A+ +   +   GLKPD+VTY
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473

Query: 630 TTLMKALIRVDKFHKVFSSY 649
           TT+M  L      H+V + Y
Sbjct: 474 TTMMSGLCTKGLQHEVEALY 493



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 12/387 (3%)

Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           C+      S+ +  LG+  KL YE            +T  +L++   R + +  A++L+ 
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           KM + GY  D + Y+ +I SL +T +++ +L    +KEI    I  +      ++ G   
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDAL--DFFKEIGRKGIRPNVVTYTALVNGLCN 237

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           +G  + A R L       ++P   TY+A++ A   +G+ +EA+ +FEE+    + P    
Sbjct: 238 SGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y++L+ G      + +A  +   M   G  PD  +Y+ LI+ +  A R E    + ++M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS 357

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                 N+  Y+ ++ G+   G+  +  +   +M S GV PD   YN+++        L 
Sbjct: 358 QRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLE 417

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  F+ M    ++ D +T+ T+I    K G+ + A  LF  +  +G  P   TY  M+
Sbjct: 418 KALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMM 477

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + L  +    +V+ L   M+ +GL+ N
Sbjct: 478 SGLCTKGLQHEVEALYTKMKQEGLMKN 504



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 155/331 (46%), Gaps = 27/331 (8%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L DA  +  EM ++   P    ++ L+ A     +++    + K+MEV   + + + ++ 
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++  +    +      VL +M   G EPD      +++ F + N +  A++  D+M+  G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD + +N +ID   K  R + A + F+E+  +G  P   TY  ++N L    RW D  
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
           RLL +M  + + PNV+TY+ L+D + ++G+  +A E                        
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           CL    D+A   F +M + G  P  ++ N+LIN F + +R  +   + + M + GL  + 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365

Query: 627 VTYTTLMKALIR---VDKFHKVFSSYLFFNI 654
           VTY TL++   +   VDK  + FS    F +
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 118/287 (41%), Gaps = 44/287 (15%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLL 185
           + +L+  LC+S    D A  +   +++        + YS L+ A  ++ K+ EA   F  
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRK--ITPNVITYSALLDAFVKNGKVLEAKEIFEE 285

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             R  + P  +TY++LI+    +D +++A  +   M   G   D ++Y+ +I    +  +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKR 345

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT--- 300
           ++  +  KL++++    +  +    N +I GF + GD  KA  F       G+SP     
Sbjct: 346 VEDGM--KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTY 403

Query: 301 --------------------------------ATYAAVITALSNSGRTIEAEAVFEELKE 328
                                            TY  VI  +  +G+  +A  +F  L  
Sbjct: 404 NILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSL 463

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
            GLKP    Y  ++ G    G   + E + ++M++ G++ ++    L
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCL 510


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 177/388 (45%), Gaps = 5/388 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T + LI+  ++      + ++ S + + GY  D I  + +I+ L     I  +L    +
Sbjct: 105 VTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKAL--HFH 162

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++     +L+      +I G  K G    A+  L    G  +      Y  +I  +   
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               +A   + E+    + P    YN L+ G   MG LKDA  ++ +M    + P  +T+
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+L+DA+   G+ + A+ V   M     KPN   Y+ ++ GY    E  +   +   M  
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV PD H Y++MI  F K   +  AM  F+ M  + I PD +T+N+LID   K GR   
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISY 402

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L  EM +RG  P   TYN +++ L +    +    LL  ++   + P+V TY  L++
Sbjct: 403 ALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILIN 462

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRV 581
              +SGR  DA +  E   D  VN + +
Sbjct: 463 GLCKSGRLKDAQKVFE---DVLVNGYNI 487



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 202/457 (44%), Gaps = 16/457 (3%)

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           LL Q+   TP  + +  ++ +  + +     ++L  +M  +G   + +  S++I   ++ 
Sbjct: 59  LLHQKNP-TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQL 117

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
               +SL   ++  I     E D   L  +I G    GD  KA+ F      +G      
Sbjct: 118 GH--NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQV 175

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           +Y  +I  L   G+T  A  +   +    ++     YN ++ G  K   + DA    SEM
Sbjct: 176 SYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEM 235

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
               + P   TY+ LI      G+ + A  +L +M + +  P  + +S ++  +   G+ 
Sbjct: 236 VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKV 295

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           +    V   M    V+P+   YN +++ +   N ++ A + F+ M   G+ PD  +++ +
Sbjct: 296 KEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIM 355

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I    K    D A +LFEEM  +  FP   TYN +I+ L +  R     +L+G M  +G 
Sbjct: 356 ISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ 415

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
            PN++TY +L+D   ++   D AIE L  L D             ++PS    N LIN  
Sbjct: 416 PPNIITYNSLLDALCKNHHVDKAIELLTKLKDH-----------NIQPSVCTYNILINGL 464

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +  R  +A  V + +  NG   DV TY T++K   +
Sbjct: 465 CKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/425 (22%), Positives = 193/425 (45%), Gaps = 16/425 (3%)

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           I +  ++ SL + N    S++  L++++E + I  +   L+ +I  F++ G  S +    
Sbjct: 70  IQFGKILGSLVKANH--YSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVF 127

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
                 G  P   T   +I  L   G   +A    +++   G +    +Y  L+ G  K+
Sbjct: 128 SNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKV 187

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G  K A  ++  ++   V  D   Y+ +ID          A     EM      P    Y
Sbjct: 188 GQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTY 247

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ G    G+ +    +L +M    + P  + +++++D F K   +  A   F  M+ 
Sbjct: 248 NTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMK 307

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           + ++P+ +T+N+L++ +      ++AE +F  M + G  P   +Y+IMI+   + +  ++
Sbjct: 308 KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDE 367

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             +L   M  + + P+VVTY +L+D   +SGR   A++ +  + D+           G  
Sbjct: 368 AMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDR-----------GQP 416

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKV 645
           P+ +  NSL++A  ++    +A  +L  +K++ ++P V TY  L+  L    R+    KV
Sbjct: 417 PNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKV 476

Query: 646 FSSYL 650
           F   L
Sbjct: 477 FEDVL 481



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 14/324 (4%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L +    P    +  +L   VK  +      +  +ME +G+  +  T S+LI+ ++  G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
              +  V   +     +P++   + ++ G   +G+  +      ++ + G + +   Y  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+   K      A+    R+  + +  D + +NT+ID   K    + A + + EM  + 
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P   TYN +I  L    + +D   LL  M  + + P V T++ LVD +          
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAF---------- 289

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C EG   +A N F VM    +KP+ +  NSL+N +       +A ++   M + G+ PD
Sbjct: 290 -CKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPD 348

Query: 626 VVTYTTLMKALIR---VDKFHKVF 646
           V +Y+ ++    +   VD+  K+F
Sbjct: 349 VHSYSIMISGFCKIKMVDEAMKLF 372



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 42/226 (18%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +SIL+ A  +  K+ EA   F++  ++ + P  +TYN+L++     +++ KA ++ + M 
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMA 341

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   D  +YS++I    +   +D ++  KL++E+ C +I  D    N +I G  K+G 
Sbjct: 342 QIGVAPDVHSYSIMISGFCKIKMVDEAM--KLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399

Query: 281 ASKAMRFLGMAQGVG-----------------------------------LSPKTATYAA 305
            S A++ +G     G                                   + P   TY  
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +I  L  SGR  +A+ VFE++  +G       YN ++KG+ K G++
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/525 (23%), Positives = 237/525 (45%), Gaps = 37/525 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYS--ILIHALGRSEKLYEAF 183
           ++ LL  LC +  S+D A      ++KH +     +Y  L    +L+  +  + K+ +  
Sbjct: 309 YNILLHGLCVA-GSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           LL   Q L P  +TY  LI    +  ++E+AL L  +    G+  + I Y++++  L + 
Sbjct: 368 LL---QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKV 424

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +I+ +L   L+ E+E  ++E D  + + +I G  K G   +A +     +     P   
Sbjct: 425 GRIEEAL--TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHF 482

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
              AV+  L  +G   EA   F+      L      YN ++ GYV++  + +A  +  +M
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ P   T++ LI+ +   G    AR +L+ + +    P+   Y+ ++  Y + G  
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q  F  L EM+++ V P    Y V+I    + N +H ++   + M ++G+ PD++T+NT+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I C  K     +A +L+  M      P   TY ++IN L      +DV R++ ++  + +
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVN 577
               VTY T++  +   G+   A+                         C  GL  +A  
Sbjct: 723 TLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            F +M ++G+ P      +++NAF +   ++  F  L  + ++G 
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 216/486 (44%), Gaps = 52/486 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L ++ L  A +R++ +  AL +++KM+   +      Y+ ++ ++  T+     ++  +Y
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTD-----IMWDVY 225

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            EI+           + +I G  +      A+ FL  +  V + P   +   +++     
Sbjct: 226 NEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKV 284

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A + F  + ++GL   + +YN LL G    G + +A     +ME+ GV PD  TY
Sbjct: 285 GLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY 344

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L   +   G    AR V+++M +    P+   Y+ ++ G+   G  +   ++ +E  S
Sbjct: 345 NTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLS 404

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G + +  FYN+++    K   +  A+  FD M +  +EPD I ++ LI    K G   R
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR 464

Query: 494 AEELFEEMQERGYFPC-----------------------------------TTTYNIMIN 518
           A +L+E+M+ +  FP                                       YNIMI+
Sbjct: 465 AYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMID 524

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                +   +  +L   M  +G+ P+VVT+ TL++ + + G   +A + LE         
Sbjct: 525 GYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE--------- 575

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             V+R  GL PS +   +L+NA+ E     E F  L  M+ N + P  VTYT L+K L R
Sbjct: 576 --VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 639 VDKFHK 644
            +K H+
Sbjct: 634 QNKMHE 639



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 228/531 (42%), Gaps = 67/531 (12%)

Query: 164 LLYSILIHALGRSEKLYEA-FLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMS 217
           L++ +L  A  R E +++A F++++ + L      P TYN+L+      D +    N   
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVP-TYNSLLHNMRHTDIMWDVYN--- 226

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +++  G        S++I  L   +K++   S L    K +    + +     N ++  F
Sbjct: 227 EIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSI-----NTIMSKF 281

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K G    A  F  +    GL   + +Y  ++  L  +G   EA    +++++ G++P  
Sbjct: 282 CKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN------------- 382
             YN L KG++ +G +  A  VV +M   G+ PD  TY+ LI  +               
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 383 ----------------------AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
                                  GR E A  +  EME    +P+  +YS ++ G    G 
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYN--VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            QR +Q+ ++M+     P  HF    V++  F   N +  A   FD      +  D + +
Sbjct: 462 VQRAYQLYEQMRLKRKFPH-HFAQRAVLLGLFKNGN-ISEARNYFDTWTRMDLMEDVVLY 519

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +ID + +      A +L+ +M ERG  P   T+N +IN    +    + +++L  +R 
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRL 579

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +GL+P+VVTYTTL++ Y + G   +    L  +   AV            P+++    LI
Sbjct: 580 KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAV-----------VPTHVTYTVLI 628

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                  +  E+  +L+YM   GL PD VTY T+++   +  +  K    Y
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 211/469 (44%), Gaps = 26/469 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+ A  +N  ++ A  L+ +M   G   D ++Y+ VI S+ +   +D +      
Sbjct: 180 FTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA------ 233

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+   K E    + N +I G  K     +A   +      G+ P   +Y+ VI+ LS+ 
Sbjct: 234 RELAM-KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDM 292

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    + AVF  +   G +P  + + +L+KG+   G + DA  + + M R GV P+   Y
Sbjct: 293 GNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAY 352

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI    + G  + A  V  +ME    +PN   YS I+ G+   G+     +   +M +
Sbjct: 353 NTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMIN 412

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   Y  M+D   + +    A    D M+S+G  P  IT+N  I    + GR + 
Sbjct: 413 CGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEW 472

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  + ++M++    P   TYN +++ L     + +   L+  +  + +  + VTY T+  
Sbjct: 473 AMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI-- 530

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           +YG S           G+  Q +     M  +G+K   + +N+ +NA+ +  +   A  V
Sbjct: 531 MYGFS---------FNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKV 581

Query: 614 LQYMK-ENGLKPDVVTYTTLMKALIR-------VDKFHKVFSSYLFFNI 654
           L  +  E   + D++T+T ++  +         V   H++    +F NI
Sbjct: 582 LDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNI 630



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 108/479 (22%), Positives = 199/479 (41%), Gaps = 32/479 (6%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDG-YHCDFINYSLVIQSLTRTNKIDSSLL 249
           + P++ + ++    +  D+  +L     +   G +    + Y  +I  L R N++D   +
Sbjct: 36  VCPVSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDG--V 93

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
             L ++++ + +    +L   VI  + ++    + ++     +  G  P    Y  V+ A
Sbjct: 94  SYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDA 153

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L +        A++  +K  GL+P    YN LLK   + G +  A  ++ EM   G  PD
Sbjct: 154 LLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPD 213

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           + +Y+ +I +    G  + AR +  + E     P   +Y+ ++ G      ++  F ++ 
Sbjct: 214 DVSYTTVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMN 268

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM   GV+P+   Y+ +I        +  ++A F RM   G  P+  T+ +LI   F  G
Sbjct: 269 EMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRG 328

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R   A  L+  M   G  P    YN +I+ L      ++   +   M    + PNV TY+
Sbjct: 329 RVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYS 388

Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
           T++  + +SG    A E                        C   + DQA +    M +D
Sbjct: 389 TIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD 448

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           G  P+ +  N+ I       R   A  VL  M++    P++ TY  L+  L R + F +
Sbjct: 449 GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFRE 507



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 214/509 (42%), Gaps = 51/509 (10%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ LLK LC  N  +D A  ++  +     C   ++ Y+ +I ++ +   + +A  L+ +
Sbjct: 182 YNVLLKALCQ-NGKVDGACKLLVEMSNKG-CDPDDVSYTTVISSMCKLGDVDKARELAMK 239

Query: 189 QRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
                  YNALI    +    ++A +LM++M   G   + I+YS VI  L          
Sbjct: 240 FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL---------- 289

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                                      +  G+   ++   G     G  P   T+ ++I 
Sbjct: 290 ---------------------------SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
                GR  +A  ++  +   G+ P   AYN L+ G    G + +A  V ++ME+  + P
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRP 382

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  TYS +I  +A +G   SA     +M     +PN  +Y+ ++        + + F ++
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI 442

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
             M S G  P    +N  I    +   +  AM   D+M      P+  T+N L+D  F+ 
Sbjct: 443 DNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRA 502

Query: 489 GRYDRAEELFEEMQERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
             +  A  L  E++ER   F C  TYN ++         + V +LLG M   G+  + +T
Sbjct: 503 NAFREACGLIRELEERKVEFDC-VTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTIT 561

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
             T V+ Y + G+   AI+ L+ +S     A +  R D +  + + L  + N  G +   
Sbjct: 562 VNTTVNAYCKLGKVKTAIKVLDNIS-----AEKEFRADIITHT-IILWGICNWLGTE--- 612

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            EA   L  M + G+ P++ T+  L++  
Sbjct: 613 -EAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 150/344 (43%), Gaps = 16/344 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  VI     S    +   +F  ++E G +P  K YN +L   +     K    + + M+
Sbjct: 112 FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMK 171

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+  TY++L+ A    G+ + A  +L EM      P+   Y+ +++     G+  
Sbjct: 172 SEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVD 231

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++  +      EP    YN +I    K      A    + M+  G++P+ I+++T+I
Sbjct: 232 KARELAMKF-----EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVI 286

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
            C    G  + +  +F  M  RG  P   T+  +I     + R  D   L   M  +G+ 
Sbjct: 287 SCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVS 346

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PNVV Y TL  I+G          C +G  D+A++ +  M  D ++P+    +++I  F 
Sbjct: 347 PNVVAYNTL--IHGL---------CSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFA 395

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           +      A      M   G +P+VV YT ++  L ++  F + F
Sbjct: 396 KSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAF 439


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 233/543 (42%), Gaps = 72/543 (13%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +IH L ++ +L EAF   ++   +R+ P  +TY  LI+   + +  ++A  ++ +M 
Sbjct: 235 YNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMS 294

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             GY  + + Y+ +I    R   I ++L  ++  ++  + I  +    N +I G+ K+  
Sbjct: 295 DRGYAPNNVVYNTLIDGYCRIGNISTAL--QIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352

Query: 281 ASKAMRFLG-MAQGVGL----------------------------------SPKTATYAA 305
              A   L  M  G G+                                   P       
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +++ L  +G+  EA  ++  L E G    T   NAL+ G  + G  ++A  ++ EM   G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           ++ D  +Y+ LI A    G+ E    + +EM     +P+ + Y+ +L G  + G+ +   
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            +  E K +G  PD + Y +MID + K N +      F  M++  IE + + + TLI  +
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            + G    A  L ++M+ RG    + TY+ +I+ L      +   +LL  MR +GL PNV
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 546 VTYTTLVDIY---GQSGRFDDAIE---------------------CLEGLSDQAVNAFRV 581
           V YT L+  Y   GQ  + D  ++                     C  G    A      
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M   G+ P  +  N+L N F ++ +  EA  V   M   G+  D +TYTTL      +D 
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL------IDG 766

Query: 642 FHK 644
           +HK
Sbjct: 767 WHK 769



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 219/505 (43%), Gaps = 54/505 (10%)

Query: 180 YEAFLLSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           Y+ F +     +TP  Y  + +++A      ++ A+ L  KM + G   + + Y+ +I  
Sbjct: 182 YQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHG 241

Query: 238 LTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           L +  ++D +    +K+ KE     +   G L+N    G  K     +A   L      G
Sbjct: 242 LCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLIN----GLVKLERFDEANCILKEMSDRG 297

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
            +P    Y  +I      G    A  + +++  +G+ P +   N+L++GY K   ++ AE
Sbjct: 298 YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            ++ EM   G + ++ T++ +I       R++SA + + EM + + KPN  + + +++G 
Sbjct: 358 HLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL 417

Query: 416 RDRGE-------WQRTFQ----------------------------VLKEMKSSGVEPDT 440
              G+       W R  +                            +LKEM   G+  D+
Sbjct: 418 CQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDS 477

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YN +I    K   +       + M+  GI+PD  T+N L+      G+ + A  L+ E
Sbjct: 478 ISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHE 537

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
            ++ G FP   TY IMI+   +  R E+ ++L   M    +  N V Y TL+  Y ++G 
Sbjct: 538 CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGN 597

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
             +A      L D        MR+ G+  ++   +SLI+          A  +L  M++ 
Sbjct: 598 MREAFR----LRDD-------MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKE 646

Query: 621 GLKPDVVTYTTLMKALIRVDKFHKV 645
           GL P+VV YT L+    ++ + HKV
Sbjct: 647 GLSPNVVCYTALIGGYCKLGQMHKV 671



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 15/378 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++    KA +   + +   +    G++P    ++ ++ A    GR  +A  +F ++++
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK 225

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+ P    YN ++ G  K G L +A     +ME+  V P   TY +LI+      R++ 
Sbjct: 226 VGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDE 285

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +LKEM      PN+ +Y+ ++ GY   G      Q+  +M S+G+ P++   N +I 
Sbjct: 286 ANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQ 345

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYDRAEELFEEMQERGY 506
            + K N + HA    + ML+ G   +  T+ ++I   C  KC R+D A     EM  R +
Sbjct: 346 GYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLC-LKC-RFDSALLFIMEMLLRNF 403

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P      ++++ L +  +  +   L   +  +G   N VT   L  I+G          
Sbjct: 404 KPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL--IHGL--------- 452

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C  G  ++A    + M   GL   +++ N+LI A  ++ +  E F + + M   G++PD+
Sbjct: 453 CEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM 512

Query: 627 VTYTTLMKALIRVDKFHK 644
            TY  L+  L  + K  +
Sbjct: 513 YTYNMLLHGLCNMGKIEE 530



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 168/343 (48%), Gaps = 9/343 (2%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
           ++L E   A      ++L+  LC + S  + A  +   L++  +  S    Y+ LI A  
Sbjct: 431 YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS--YNTLILACC 488

Query: 175 RSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +  K+ E F L +   R+ + P   TYN L+        +E+A  L  + +++G   D  
Sbjct: 489 KEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAY 548

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y ++I    + N+++    +KL++E+   KIE +  +   +I  + + G+  +A R   
Sbjct: 549 TYGIMIDGYCKANRVEEG--EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRD 606

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +  G+   +ATY+++I  LSN G    A  + +E+++ GL P    Y AL+ GY K+G
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLG 666

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            +   + ++ EM  + V P++ TY+++I+ +   G  ++A  +L EM      P++  Y+
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +  G+   G+ +   +V   M + G+  D   Y  +ID + K
Sbjct: 727 ALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 147/349 (42%), Gaps = 24/349 (6%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F  L   GL P  K  N LL   VK   +K +  V   M   GV PD + +S +++A+ 
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
             GR + A  + ++ME     PN   Y+ I+ G    G     FQ  ++M+   V+P   
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y V+I+   K      A      M   G  P+ + +NTLID + + G    A ++ ++M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G  P + T N +I    +  + E  + LL  M   G + N  T+T+++       RF
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 562 DDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
           D A+                         C  G   +A+  +  +   G   + +  N+L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           I+   E     EA  +L+ M E GL  D ++Y TL+ A  +  K  + F
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F++   + + G+ P     N ++ +  K N +  +   FD M   G+ PD   ++T+++
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                GR D A ELF +M++ G  P   TYN +I+ L +  R ++  +    M  + + P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
           ++VTY  L++   +  RFD+A   L+ +SD+           G  P+N+  N+LI+ +  
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDR-----------GYAPNNVVYNTLIDGYCR 314

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
               + A  +   M  NG+ P+ VT  +L++   + ++ 
Sbjct: 315 IGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 227/493 (46%), Gaps = 36/493 (7%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           ++ L+  L + +   + F L  + RL+ +     T N L++     + + + L +M+ + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 221 QDGYHCDFINYSLVIQSLTRTNKID-SSLLQKLYKEIECDKIELD-GQLLNDVIVGFAKA 278
           + GY  D + Y+ +I+ L   ++I  ++LL    +++ C    +  G L+     G  + 
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK----GLCRT 214

Query: 279 GDASKAMRFL------GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
           G+ S A++            G+   P   +Y+ +I AL    R  EA  +FEE+K  G+ 
Sbjct: 215 GNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMT 274

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   +Y +L+         ++A+ + +EM   GV P+  T+++LID     G+   A+ +
Sbjct: 275 PTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDL 326

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L+ M      PN   Y+ ++ G+   G+     ++   M S G EPD   Y V+I+ + K
Sbjct: 327 LEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCK 386

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            + +  AM  ++ ML  G  PD  T+  L+   F+ G+   A++LF  M+  G       
Sbjct: 387 TSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYI 446

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y I +N L +     +   L   +++  +  ++  +  L+D   ++G+ + A E  E L 
Sbjct: 447 YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLP 506

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +            L+P  +  N +I+ F    +  +A  + Q M++NG  PD +TY TL
Sbjct: 507 QEE-----------LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATL 555

Query: 633 MKALIRVDKFHKV 645
           ++      K  KV
Sbjct: 556 IRGFFESKKLEKV 568



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 212/458 (46%), Gaps = 25/458 (5%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-Q 189
           LL  LC+ N  +    AV++ + +    Y  +++ Y+ LI  L    ++ +A LL  R Q
Sbjct: 137 LLNCLCNVNR-VGEGLAVMAGILRRG--YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 190 RL--TP--LTYNALISACARNDDLEKALNLMSKMRQDG--YHCDF----INYSLVIQSLT 239
           +L  TP  +TY  L+    R  ++  AL L  +M  D   Y  +F    I+YS++I +L 
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  + D +  + L++E++        Q +   ++ +       +A R        G+ P 
Sbjct: 254 KDRREDEA--RDLFEEMKV-------QGMTPTVISYTSL-MWEEAKRLFNEMVNQGVQPN 303

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  +I  L   G+ IEA+ + E + + G+ P    YN+L++G+  +G L  A  +  
Sbjct: 304 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 363

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M   G  PD   Y++LI+ Y    + E A  +   M     +P+   Y  +L G    G
Sbjct: 364 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 423

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     ++   MK  G+  D + Y + ++   K  CL  AM  F+++ S  I+ D   +N
Sbjct: 424 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFN 483

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LID   K G+ + A ELFE++ +    P   TYNIMI+      +      L   M   
Sbjct: 484 CLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKN 543

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           G  P+ +TY TL+  + +S + +  +E L  +  + V+
Sbjct: 544 GCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 180/396 (45%), Gaps = 30/396 (7%)

Query: 276 AKAGD--ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            K G+  A +A +F  +      +P  +++  +++ L+      +   ++ +++ SG+ P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
                N LL     +  + +   V++ + R G +PD  TY+ LI       R   A ++ 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS----GV--EPDTHFYNVMI 447
             M+     PN+  Y  ++ G    G      ++ +EM +     G+  +P    Y+++I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           D   K      A   F+ M  +G+ P  I++ +L+        ++ A+ LF EM  +G  
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQ 301

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   T+N++I++L ++ +  + K LL  M  +G++PN++TY +L++ +           C
Sbjct: 302 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGF-----------C 350

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L G  + A   F  M + G +P  +    LIN + +  +  EA  +   M + G +PDV 
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410

Query: 628 TYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGE 663
           TY  L+  L +     KV  +   F + K+    G+
Sbjct: 411 TYGALLTGLFQGG---KVGDAKKLFGVMKVYGIPGD 443



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 7/282 (2%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           +++LI  L +  K+ EA   L    QR + P  LTYN+LI       DL  A  L   M 
Sbjct: 307 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 366

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I Y+++I    +T+K++ ++  KLY  +       D +    ++ G  + G 
Sbjct: 367 SKGCEPDVICYTVLINGYCKTSKVEEAM--KLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A +  G+ +  G+      Y   +  L  +G   EA  +F +LK   +K   + +N 
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K G L+ A  +  ++ +  + PD  TY+++I  +   G+   A I+ ++ME + 
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
             P+   Y+ ++ G+ +  + ++  ++L  M    V  D + 
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNI 586


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 220/521 (42%), Gaps = 77/521 (14%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID------ 245
           TP+ YN L+ A  R D L+    L   +   G   D    + ++++L+   ++D      
Sbjct: 108 TPV-YNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVF 166

Query: 246 ----------SSLLQKLYKEI--ECDKI-------ELDGQLLNDVIVGFAKAGDASKAMR 286
                     S +L + Y       D +       E++  + N V+ GF + G   +A R
Sbjct: 167 DAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAER 226

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES---GL-KPRTKAYNALL 342
            +   +  GL+P   T+   I+AL  +GR +EA  +F +++E+   GL +P    ++ +L
Sbjct: 227 LVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVML 286

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
            G+   G + +A  +V  M   G L    +Y+  +      GR   A+ +L EM     +
Sbjct: 287 SGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQ 346

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PNS+ Y+ I+ G    G+     +V   ++S  + PD   Y  ++  +        A   
Sbjct: 347 PNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRI 406

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
            D M  +G  P+  T+N L+    K GR    E L E M E+GY   T + NI+I+ L  
Sbjct: 407 LDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCR 466

Query: 523 QERWEDVKRLLGNMRAQG-----------------------LLPNVVTYTTLVDIYGQSG 559
             + E    ++  M  +G                        LP+ +TY+TL++   + G
Sbjct: 467 NSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEG 526

Query: 560 RFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           RFD+A +                        C+ G +  A+   R M      PS  + N
Sbjct: 527 RFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYN 586

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            LI  F E Q+  E   ++  MKE G+  +V+TY +L+K+ 
Sbjct: 587 LLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSF 627



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/541 (22%), Positives = 225/541 (41%), Gaps = 79/541 (14%)

Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA 182
           A P     + L    S+   +DLA  V   +   N     E    IL     R+ +  +A
Sbjct: 139 ATPDVFTRNALLEALSAAGRMDLARRVFDAMPARN-----EFSSGILARGYCRAGRSADA 193

Query: 183 F-LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
             +L     +  +  N +++   R   +++A  L+ +MR  G   + + ++  I +L + 
Sbjct: 194 LAVLDAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKA 253

Query: 242 NKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            ++  +  +   + +  E      D    + ++ GF  AG   +A   + + +  G   K
Sbjct: 254 GRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRK 313

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             +Y   ++ L  +GR  EA+ +  E+   G++P +  YN ++ G  K G   D   V  
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRV-E 372

Query: 360 EMERSGVL-PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           +  RSGV+ PD  TY+ L+ AY + G   +A  +L EM      PN F Y+ +L      
Sbjct: 373 DFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKA 432

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-------- 470
           G      ++L+ M   G   DT   N++ID   + + L  AM   D M +EG        
Sbjct: 433 GRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLG 492

Query: 471 ---------------IEPDTITWNTLIDCHFKCGRYDRAEE------------------- 496
                            PD IT++TL++   K GR+D A++                   
Sbjct: 493 NSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDT 552

Query: 497 ----------------LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
                           +  +M++R   P T +YN++I    E+++ +++ +L+  M+ +G
Sbjct: 553 FIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKG 612

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           +  NV+TY +L+  +           C  G+ ++A+     M  + + P+  +   LI A
Sbjct: 613 ISSNVMTYNSLIKSF-----------CGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKA 661

Query: 601 F 601
           F
Sbjct: 662 F 662



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 155/369 (42%), Gaps = 39/369 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK-IDSSLLQKLY 253
           +YN  +S   +N  + +A  L+S+M  +G   +   Y++++  L +  K  D   ++   
Sbjct: 316 SYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFV 375

Query: 254 KEIECDKIELDGQLLNDVIV------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +          G +  DV+        +   G+ + A R L      G +P   TY  ++
Sbjct: 376 RS---------GVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLL 426

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG-- 365
            +L  +GRT E E + E + E G    T + N ++ G  +   L+ A  +V  M   G  
Sbjct: 427 QSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRL 486

Query: 366 ---------------------VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
                                 LPD  TYS L++A    GR++ A+  L EM      P+
Sbjct: 487 ALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPD 546

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
           S IY   + GY   G+     +VL++M+     P T  YN++I  F +       +    
Sbjct: 547 SVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMS 606

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M  +GI  + +T+N+LI      G  ++A  L +EM +    P  T++ ++I    +  
Sbjct: 607 EMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTA 666

Query: 525 RWEDVKRLL 533
            +   +R+ 
Sbjct: 667 DFSAAQRVF 675



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 24/320 (7%)

Query: 321 AVFEELKE-SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + F  L+   G  P T  YN LL   ++   L   E +  ++  +G  PD  T + L++A
Sbjct: 93  SAFRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEA 152

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            + AGR + AR V   M       N F    +  GY   G       VL  M     E +
Sbjct: 153 LSAAGRMDLARRVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMP----EMN 204

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
               N ++  F +   +  A    DRM ++G+ P+ +T+N  I    K GR   A  +F 
Sbjct: 205 LVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFN 264

Query: 500 EMQ---ERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +MQ   E+G   P   T+++M++   +    ++   L+  MR  G L  V +Y   +   
Sbjct: 265 DMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGL 324

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++GR  +A E L  ++ +           G++P++   N +++   ++ +  +   V  
Sbjct: 325 VKNGRVGEAQELLSEMAHE-----------GVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373

Query: 616 YMKENGLKPDVVTYTTLMKA 635
           +++   + PDVVTYT+L+ A
Sbjct: 374 FVRSGVMTPDVVTYTSLLHA 393



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 86/403 (21%), Positives = 165/403 (40%), Gaps = 33/403 (8%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SLL   CS  ++      +    QK   C      Y++L+ +L ++ +  E   L +R
Sbjct: 387 YTSLLHAYCSKGNTTAANRILDEMAQKG--CAPNLFTYNVLLQSLLKAGRTTEVERLLER 444

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGY------------------- 224
                  L   + N +I    RN  LE A++++  M  +G                    
Sbjct: 445 MSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSI 504

Query: 225 --HC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
              C  D I YS ++ +L +  + D +  +KL + I  D I  D  + +  I G+   G 
Sbjct: 505 SKSCLPDRITYSTLMNALCKEGRFDEAK-KKLVEMIGKD-ISPDSVIYDTFIHGYCMHGK 562

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A++ L   +    +P T +Y  +I       ++ E   +  E+KE G+      YN+
Sbjct: 563 TSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNS 622

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+K +   G +  A  ++ EM ++ ++P+  ++ LLI A+     + +A+ V  ++ +S 
Sbjct: 623 LIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF-DVALST 681

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
                 +Y  +         W     +L+      +   +  Y  +I      +   HA 
Sbjct: 682 CGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAH 741

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +     +++G   D  T+  +ID   + G+   A+ L E+M E
Sbjct: 742 SLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 203/448 (45%), Gaps = 39/448 (8%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L +   L  A   F   +    TP  +TYN+LI    +   L++ + +  +M+
Sbjct: 59  YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D I Y+ +I    +  ++  +   +   E++ + ++ +    +  I  F K G 
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAF--EFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A++F    + V L+P   TY ++I A   +G   EA  + EE+ ++G+K     Y A
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  + G +K+AE V   M  +GV P++ TY+ L+  +  A   E A+ +LKEM+   
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF---------- 450
            KP+  +Y  IL G  +    +    ++ E+K SG+  +   Y  ++D +          
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356

Query: 451 -------------GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                         K NC   A   FD ML +G+ PD I +  LID + K G    A  L
Sbjct: 357 TLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            + M E G       Y  +I  L    + +  + LL  M  +G+LP+ V Y  L+  Y  
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476

Query: 558 SGRFDDAIEC---------LEGLSDQAV 576
            G+ D+A+E          + GLSD AV
Sbjct: 477 LGKVDEALELQNEMAKRGMITGLSDHAV 504



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 199/440 (45%), Gaps = 14/440 (3%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           LE+A     KMR+        + + ++  L++  + D S  +K +K++    I+      
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS--RKFFKDMGAAGIKRSVFTY 59

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I    K GD   A       +  G +P   TY ++I      G   E   +FE++K+
Sbjct: 60  NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +   P    YNAL+  + K   +  A   + EM+ +G+ P+  TYS  IDA+   G  + 
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A     +M      PN F Y+ ++      G      ++++E+  +G++ +   Y  ++D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   +  A   F  ML+ G+ P+  T+  L+    K    + A+++ +EM+E+   P
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               Y  ++  L  + R E+ K L+G ++  G+  N V YTTL+D Y +SG+  +A+  L
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 569 EGLSDQA-----VNAFRV-------MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           E + D        N F V       M   G+ P  +A  +LI+   +     EA  +   
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 419

Query: 617 MKENGLKPDVVTYTTLMKAL 636
           M E G++ D+  YT L+  L
Sbjct: 420 MIEIGMELDLHAYTALIWGL 439



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 11/183 (6%)

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A   F +M    + P   + N L+    K GR D + + F++M   G      TYNI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           MI+ L ++   E  + L   M+  G  P++VTY +L+D +G+ G  D+ I C+       
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI-CI------- 113

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M+     P  +  N+LIN F + +R  +AF  L  MK NGLKP+VVTY+T + A
Sbjct: 114 ---FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 170

Query: 636 LIR 638
             +
Sbjct: 171 FCK 173



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           + A E F +M++   FP   + N +++ L +  R +  ++   +M A G+  +V TY  +
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +D             C EG  + A + F  M+  G  P  +  NSLI+  G+     E  
Sbjct: 63  IDYL-----------CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI 111

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            + + MK+    PDV+TY  L+    + ++  K F
Sbjct: 112 CIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 146



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 31/215 (14%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALI-----SACARNDDLEKALNLMSK 218
           LLY  ++  L    +L EA LL    + + +  NA+I      A  ++    +AL L+ +
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND------VI 272
           M              ++  L + N  + +  +KL+ E+      LD  ++ D      +I
Sbjct: 362 MLD------------LVDGLCKNNCFEVA--KKLFDEM------LDKGMMPDKIAYTALI 401

Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
            G  K G+  +A+        +G+      Y A+I  LS+SG+  +A  + +E+   G+ 
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
           P    Y  L+K Y  +G + +A  + +EM + G++
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 12/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P  AT+  V    + +GR  + + V++ + E+G   R   Y  L+    K+G   +A  +
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           +  M           YS +I+      R E AR ++++M   +A P++  Y  I+     
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
                     ++EM + G++PD   YN ++    +   +  A   F++M+ + I P+ +T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NTLI+   K  R + A ELF+EM  +GY P   +YN +I+   +++     K +   M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
               +PNVVTYTTL+D   +SG+   A E L+G+  +           G+ P+    + L
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-----------GVTPNVATYSCL 295

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           I+ F + +R  EA  +L+ M   G+ P VVTY  L+ +L R DK    F  +
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 188/410 (45%), Gaps = 9/410 (2%)

Query: 174 GRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E++ E +  ++     L    Y  LIS   +  + ++A  L+  MR   +    I Y
Sbjct: 24  GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAY 83

Query: 232 SLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           S +I  L + N+++ +  L++K+ +    D +         ++    K      A+  + 
Sbjct: 84  STIINWLCKLNRVEEARELIEKMARYAPPDALTY-----GPIVERLCKTKRIDDALATVE 138

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                G+ P    Y  V++ L    +  EA  +FE++ +  + P    YN L+ G  K  
Sbjct: 139 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 198

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            ++ A  +  EM   G +P E +Y+ LID +       +A+ V  +M  S+  PN   Y+
Sbjct: 199 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 258

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G    G+ Q   +VL  M   GV P+   Y+ +ID F K   +  A    ++M+++
Sbjct: 259 TLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 318

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           GI P  +T+N L++   +  + + A +LF  M +R   P   TYN ++  L   ++ +  
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            RL   M A+G  P+ +TY TL     ++G+  +A E +E +     N F
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPF 428



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 166/374 (44%), Gaps = 12/374 (3%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I    K G+  +A + L   +      K   Y+ +I  L    R  EA  + E++    
Sbjct: 51  LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA 110

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    Y  +++   K   + DA   V EM   G+ PD   Y+ ++       + E AR
Sbjct: 111 -PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 169

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++ ++M      PN   Y+ ++ G       +  +++ KEM   G  P    YN +ID F
Sbjct: 170 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   L  A   FD+M+     P+ +T+ TLID   K G+   A E+ + M ++G  P  
Sbjct: 230 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 289

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY+ +I+   +  R ++  +LL  M  QG+ P VVTY  L++   ++ + +DA +   G
Sbjct: 290 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 349

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
           ++ +  +           P+ +  N+L+ A    ++   A  +   M   G  PD +TY 
Sbjct: 350 MAQRRCH-----------PTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398

Query: 631 TLMKALIRVDKFHK 644
           TL   L R  K H+
Sbjct: 399 TLAWGLTRAGKVHE 412



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 185/387 (47%), Gaps = 17/387 (4%)

Query: 268 LNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            N V  GFAKAG   +    + GM +  G + + + Y  +I+ L   G   EA  +   +
Sbjct: 13  FNTVADGFAKAGRLEQVKEVYQGMVEA-GYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           +    K +  AY+ ++    K+  +++A  ++ +M R    PD  TY  +++      R 
Sbjct: 72  RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKRI 130

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A   ++EM     KP++FIY+ +L+G     + +    + ++M    + P+   YN +
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+   K   +  A   F  M  +G  P  +++NTLID   K      A+++F++M     
Sbjct: 191 INGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY  +I+ L +  + +    +L  M  +G+ PNV TY+ L+D + +  R D+A +
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            LE            M T G+ P+ +  N L+N+     +  +AF + + M +    P V
Sbjct: 311 LLEQ-----------MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 627 VTYTTLMKALI---RVDKFHKVFSSYL 650
           VTY TL++AL    ++D  H++++  +
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMI 386



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 166/379 (43%), Gaps = 7/379 (1%)

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R+ P   T+N +    A+   LE+   +   M + GY      Y ++I  L +    D 
Sbjct: 4   RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAA 305
           +   KL   +   + +      + +I    K     +A   +  MA+     P   TY  
Sbjct: 64  AY--KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA--PPDALTYGP 119

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L  + R  +A A  EE+   G+KP    YN +L G  +   +++A  +  +M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P+  TY+ LI+    A R E+A  + KEM      P    Y+ ++ G+  + +     
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
            V  +M  S   P+   Y  +ID   K   +  A    D M+ +G+ P+  T++ LID  
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            K  R D A +L E+M  +G  P   TYNI++N L   ++ ED  +L   M  +   P V
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 546 VTYTTLVDIYGQSGRFDDA 564
           VTY TL+       + D A
Sbjct: 360 VTYNTLLRALCHHKQLDGA 378



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 15/215 (6%)

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V P    +N + D F K   L      +  M+  G       +  LI C  K G +D A 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L   M+ + +      Y+ +IN L +  R E+ + L+  M A+   P+ +TY  +V+  
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++ R DDA+  +E            M T G+KP     N +++   ++++  EA  + +
Sbjct: 125 CKTKRIDDALATVEE-----------MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE 173

Query: 616 YMKENGLKPDVVTYTTLMKALI---RVDKFHKVFS 647
            M +  + P+VVTY TL+  L    R++  +++F 
Sbjct: 174 KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFK 208



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 166 YSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+IL+++L R++KL +AF L      +R   T +TYN L+ A   +  L+ A  L ++M 
Sbjct: 327 YNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMI 386

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKL 252
             G   D I Y  +   LTR  K+  +  L++K+
Sbjct: 387 AKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 193/469 (41%), Gaps = 30/469 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +  ++++ A        L+L  +M   G   D    ++VI S    N++D   S+L K++
Sbjct: 77  FAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIF 136

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       + D      +I G    G   +A+       G G  P   TY  +I  L   
Sbjct: 137 KLGH----QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKV 192

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G +  A  +   + +   +P    YN ++    K   + +A  + SEM   G+ P+  TY
Sbjct: 193 GNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTY 252

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +I        W+    ++ EM  S   PN  I++ ++      G       V+  M  
Sbjct: 253 NSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQ 312

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GVEPD   Y  ++D     + +  A   FD M+ +G  P+ I+++TLI+ + K  R D+
Sbjct: 313 RGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDK 372

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LFEEM +R   P   TYN +I+ L    R  D   L   M A G +P++VTY  L+D
Sbjct: 373 AMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLD 432

Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
              ++   D A+                         C  G  + A + F  + + GL P
Sbjct: 433 YLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHP 492

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                  +IN        AEA  + + M  +G  PD  TY  + +  +R
Sbjct: 493 DVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLR 541



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 201/468 (42%), Gaps = 30/468 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T   +I++    + ++   ++++K+ + G+  D   ++ +I+ L    KI  +L   L+ 
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEAL--HLFD 168

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  +  + +G     +I G  K G++  A+R L         P   TY  +I  L    
Sbjct: 169 KMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDR 228

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +F E+   G+ P    YN+++ G  K    K    +++EM  S ++P+   ++
Sbjct: 229 QVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+DA    G    A  V+  M     +P+   Y+ ++ G+  R E     +V   M   
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRYD 492
           G  P+   Y+ +I+ + K   +  AM  F+ M    + P+ +T+NTLI   CH   GR  
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV--GRLR 406

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  LF EM   G  P   TY I+++ L +    +    +L  +    L P++ +Y  ++
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVI 466

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
           D   + G  + A +                        CL+GL  +A   FR M TDG  
Sbjct: 467 DGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCS 526

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           P +   N +   F  +     A  +LQ M   G   D  T T +++ L
Sbjct: 527 PDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 173/396 (43%), Gaps = 11/396 (2%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S +  L K+++   I  D   L  VI  F            L     +G  P TAT+  +
Sbjct: 91  STVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTL 150

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L   G+  EA  +F+++   G +P    Y  L+ G  K+G  + A  ++  M +   
Sbjct: 151 IRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNC 210

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+  TY+ +ID      +   A  +  EM      PN   Y+ I+ G     EW+    
Sbjct: 211 EPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVAT 270

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           ++ EM  S + P+   +  ++D   K   +  A    D M+  G+EPD +T+  L+D H 
Sbjct: 271 LMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHC 330

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
                D A+++F+ M  +G  P   +Y+ +IN   + +R +    L   M  + L+PN+V
Sbjct: 331 LRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIV 390

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY TL+      GR  DAI             F  M   G  P  +    L++   + + 
Sbjct: 391 TYNTLIHGLCHVGRLRDAIA-----------LFHEMVASGQIPDLVTYRILLDYLCKTRH 439

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +A A+L+ ++ + L PD+ +Y  ++  + RV + 
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGEL 475



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 177/418 (42%), Gaps = 7/418 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++ LI  L    K+ EA  L  +   +   P  +TY  LI    +  +   A+ L+  M 
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     + I Y+ +I  L +  +++ +L   ++ E+    I  +    N +I G  K  +
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEAL--NIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                  +       + P    +  ++ AL   G    A  V + + + G++P    Y A
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTA 324

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+     + +A+ V   M R G  P+  +YS LI+ Y    R + A  + +EM    
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   Y+ ++ G    G  +    +  EM +SG  PD   Y +++D   K   L  AM
Sbjct: 385 LVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAM 444

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           A    +    + PD  ++N +ID   + G  + A +LF  +  +G  P   TY IMIN L
Sbjct: 445 AMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
             Q    +  +L   M   G  P+  TY  +   + ++     AI+ L+ +  +  +A
Sbjct: 505 CLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSA 562



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 163/362 (45%), Gaps = 31/362 (8%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA + F  +      P    +  +L     M +      +  +M+  G+  D +T +++I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +++ +  R +    VL ++     +P++  ++ ++ G    G+      +  +M   G +
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   Y  +I    K      A+     M+ +  EP+ IT+NT+IDC FK  + + A  +
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD---- 553
           F EM  +G  P  +TYN +I+ L +   W+ V  L+  M    ++PNVV +TTLVD    
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 554 ------------IYGQSGRFDDAI--------ECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
                       +  Q G   D +         CL    D+A   F  M   G  P+ ++
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVF 646
            ++LIN + + QR  +A  + + M +  L P++VTY TL+  L  V +       FH++ 
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 647 SS 648
           +S
Sbjct: 417 AS 418



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 215/507 (42%), Gaps = 59/507 (11%)

Query: 74  VLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFK---LAESYRAVPAP--- 127
           VLSL KQ       ++ L   S+  + + + +S   LNRV+F    LA+ ++    P   
Sbjct: 93  VLSLSKQ-------MDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTA 145

Query: 128 LWHSLLKNLCSSNS---SIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
            + +L++ LC       ++ L   +V    + N      + Y  LIH L   G S     
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPN-----GVTYGTLIHGLCKVGNSRAAIR 200

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
                 ++   P  +TYN +I    ++  + +ALN+ S+M   G   +   Y+ +I  L 
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260

Query: 240 RTNK---------------------IDSSLLQKLYKE----IECDKIELDGQ--LLNDVI 272
           + ++                     I ++L+  L KE    I  D +++  Q  +  DV+
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320

Query: 273 V------GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
                  G     +  +A +        G +P   +Y+ +I       R  +A  +FEE+
Sbjct: 321 TYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEM 380

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            +  L P    YN L+ G   +G L+DA  +  EM  SG +PD  TY +L+D        
Sbjct: 381 CQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL 440

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           + A  +LK +E S+  P+   Y+ ++ G    GE +    +   + S G+ PD   Y +M
Sbjct: 441 DQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIM 500

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+       L  A   F  M ++G  PD  T+N +     +      A +L +EM  RG+
Sbjct: 501 INGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLL 533
               +T  +++ +L +    + VK++L
Sbjct: 561 SADASTITLIVEMLSDDGLDQSVKQIL 587



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKAL 213
           C    + YS LI+   + +++ +A  L +   ++ L P  +TYN LI        L  A+
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L  +M   G   D + Y +++  L +T  +D ++   + K IE   +  D Q  N VI 
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAM--AMLKAIEGSNLAPDIQSYNIVID 467

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  + G+   A          GL P   TY  +I  L   G   EA  +F E+   G  P
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               YN + +G+++      A  ++ EM   G   D  T +L+++  ++ G  +S + +L
Sbjct: 528 DDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587

Query: 394 KE 395
            E
Sbjct: 588 HE 589


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/580 (22%), Positives = 258/580 (44%), Gaps = 29/580 (5%)

Query: 73  DVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSL 132
           D  ++    Y +T ++  L +    +    + S     + +   L +S  AVP   ++ L
Sbjct: 221 DCKTVTPNGYSYTSMIKALCKVGKVDDGFKILS-----DLIHAGLQQSAGAVP---YNLL 272

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE-AFLLSQRQRL 191
           +  LC S   +D A  +   +++  +  S  + + ILI+ L RS++  E   LL + + L
Sbjct: 273 MDALCKSGR-VDEAIRLKGRMEESRVAPSM-VTFGILINGLKRSDRFGEVGALLREMEGL 330

Query: 192 --TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
             TP  +  N LI    R     +A+ L  +M         + Y+L+ ++L +  +++ +
Sbjct: 331 GITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERA 390

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGF-AKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
             +++ +E+    + +   L N V+ G   + G     +R +      G+ P  A   A 
Sbjct: 391 --ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTAC 448

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
              L    R  EA  ++ ++ E GL       NAL+ G  +   +K A  V+  M   G+
Sbjct: 449 TKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGM 508

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
             D  TY+++I       + E A  +  +M     KP++++++ I+  Y D G+ +    
Sbjct: 509 ELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALH 568

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L +MK  GV+PD   Y  +ID + K   +  A    + +++ G++P+ + +N LI  + 
Sbjct: 569 LLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYG 628

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G    A  + + M+  G  P   TY  +++ +      ++ K +    R   +   VV
Sbjct: 629 RNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVV 688

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
            YT ++    + G+ D           +A+N F  MR+  + P+ +   +L+ A+ +   
Sbjct: 689 GYTIMIQGLCKIGKMD-----------EAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGN 737

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           + EA  +   M  +G+ PD V+Y TL+    +VD   K  
Sbjct: 738 NEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAI 777



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 178/418 (42%), Gaps = 36/418 (8%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY--HCDFINYSLVIQSLTRT 241
           ++S+  + T +TYN +  A  +  ++E+A  ++ +M   G   H    N S+V   L RT
Sbjct: 362 MVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFN-SVVAGLLQRT 420

Query: 242 NKIDS--SLLQKLYKE---------IECDKIELDG-----------QLL----------- 268
            +++S   L+ ++ K            C K    G           ++L           
Sbjct: 421 GRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATS 480

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G  +  +   A   L      G+     TY  +I       +  EA  + +++  
Sbjct: 481 NALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIR 540

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G KP    +N+++  Y  +G +++A  ++ +M+  GV PD  +Y  +ID Y  A   + 
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A   L E+     KPN+ IY+ ++ GY   G       VL  M+S G++P    Y  ++ 
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH 660

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
                  +  A   F++     IE   + +  +I    K G+ D A   FEEM+ R   P
Sbjct: 661 WMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPP 720

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
              TY  ++    +    E+  +L   M + G++P+ V+Y TLV  + Q    D AIE
Sbjct: 721 NKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 36/382 (9%)

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNALLKGYVKMGYLKDAE 355
           SP   T  A++ AL+ +G       VF+E+++   + P   +Y +++K   K+G + D  
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249

Query: 356 FVVSEM------ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
            ++S++      + +G +P    Y+LL+DA   +GR + A  +   ME S   P+   + 
Sbjct: 250 KILSDLIHAGLQQSAGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFG 305

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            ++ G +    +     +L+EM+  G+ P+    N +ID   +      A+  FD M+S+
Sbjct: 306 ILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSK 365

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN-IMINLLGEQERWED 528
            ++   +T+N +     K G  +RAE + EEM   G    +  +N ++  LL    R E 
Sbjct: 366 EMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLES 425

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-------------------ECLE 569
           V RL+  M  +G+ PN    T       Q  R  +A+                     + 
Sbjct: 426 VVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIH 485

Query: 570 GLSD-----QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
           GL +      A    R M   G++  N+  N +I    +D +  EA  +   M   G KP
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545

Query: 625 DVVTYTTLMKALIRVDKFHKVF 646
           D   + +++ A   + K  +  
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEAL 567



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 207/476 (43%), Gaps = 66/476 (13%)

Query: 181 EAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ------DGYHCDFINYS 232
           +AF +   +R +P   T NAL+ A AR  +L     +  +MR       +GY     +Y+
Sbjct: 179 DAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGY-----SYT 233

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG-QLLNDVIVGFAKAGDASKAMRFLGMA 291
            +I++L +  K+D                  DG ++L+D+I                G+ 
Sbjct: 234 SMIKALCKVGKVD------------------DGFKILSDLI--------------HAGLQ 261

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           Q  G  P    Y  ++ AL  SGR  EA  +   ++ES + P    +  L+ G  +    
Sbjct: 262 QSAGAVP----YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRF 317

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +   ++ EME  G+ P+E   + LID +   G +  A  +  EM     K  +  Y+ I
Sbjct: 318 GEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLI 377

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN-VMIDTFGKYNCLHHAMAAFDRMLSEG 470
                  GE +R  ++L+EM S+G+   +  +N V+     +   L   +     M+  G
Sbjct: 378 ARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRG 437

Query: 471 IEPDT--ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           ++P+   +T  T   C  +  R+  A  ++ +M E+G      T N +I+ L E +  + 
Sbjct: 438 MKPNDALMTACTKQLCQGR--RHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKG 495

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
              +L  M  +G+  + +TY  ++    +  + ++A++    L D  +         G K
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALK----LRDDMIR-------KGFK 544

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           P     NS+I+A+ +  +  EA  +L  MK  G++PDVV+Y T++    +     K
Sbjct: 545 PDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 10/158 (6%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVT 547
           G    A + F  +  R   P   T N ++  L          ++   MR  + + PN  +
Sbjct: 172 GSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYS 231

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           YT+++    + G+ DD  + L  L    +      ++ G  P NL    L++A  +  R 
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQ-----QSAGAVPYNL----LMDALCKSGRV 282

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            EA  +   M+E+ + P +VT+  L+  L R D+F +V
Sbjct: 283 DEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEV 320


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 206/463 (44%), Gaps = 19/463 (4%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN L+ A  +N+ +  A  ++ +M + G   D + Y+ ++  L + +++D +      
Sbjct: 160 FTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA------ 213

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+      +     N +++   +     +    +    G GL P   TY  ++ A   +
Sbjct: 214 TEVLAAMPPVAASY-NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKA 272

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A A+   +  +G  P    + AL++G    G + DA  +   M   G  P   +Y
Sbjct: 273 GELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSY 332

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI    + G  + A  +L  ME     PN   YS ++ G+   G+      +  +M  
Sbjct: 333 NILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSR 392

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           SG +P+   Y  M+D F K    + A +  D+ML E   P+T+T+NTLI     C R  R
Sbjct: 393 SGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGR 452

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  +F EM+  G  P   TYN +I+ L  +    D   ++  M++ G+  ++VTY T+V 
Sbjct: 453 ALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV- 511

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
               SG       C   +S +A+     M   G++P+    +++I+A+ ++     A  +
Sbjct: 512 ----SGL------CQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWM 561

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
           L  M       +++ YT LM  L   DK      +YL   +Y+
Sbjct: 562 LGAMNVVNCHRNILVYTILMAELCNQDKLVDAM-TYLLKMLYE 603



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 29/341 (8%)

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           V++ +++ G+ P    YN L++   +   +  A  ++ EM R G  PD+ TY+ ++    
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
              R + A  VL  M      P +  Y+ I+         Q  F V+ +M   G++P+  
Sbjct: 206 KLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  ++D F K   L  A A   RM+  G  P+ +T+  L+   F  GR   A +++  M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
              G+ P T +YNI+I  L      +    +L +M   G  PNV TY+TL+D + ++G  
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 562 DDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             AI                         C + + +QA +    M  +   P+ +  N+L
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           I +  + +R   A  V   M+ +G  P+  TY  L+  L R
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR 481



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 35/262 (13%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V   M+  GV P+   YN+++    + N +  A    D M  +G  PD +T+ T++    
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K  R D A E+   M      P   +YN ++  L  + R ++V  ++ +M  +GL PNV+
Sbjct: 206 KLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 547 TYTTLVDIYGQSGRFDDAIECL------------------------EGLSDQAVNAFRVM 582
           TYTT+VD + ++G    A   L                        +G    A++ +R M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +G  PS ++ N LI           A ++L  M+++G  P+V TY+TL      +D F
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL------IDGF 374

Query: 643 HKVFSSYLFFNIYKMLSYSGEK 664
            K        +I+  +S SG K
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCK 396



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 37/76 (48%)

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           C E +    V  +  MR DG+ P+    N L+ A  ++ R   A  +L  M   G  PD 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 627 VTYTTLMKALIRVDKF 642
           VTY T++  L ++D+ 
Sbjct: 195 VTYATIVSVLCKLDRL 210


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 195/456 (42%), Gaps = 21/456 (4%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQ------DGYHC--DFINYSLVIQSLTRTN 242
           L  ++Y  LI+    N  + +A+NL+  + +      DG+    + + YS+VI  L R  
Sbjct: 140 LNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNG 199

Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
            +D     + Y E+  + +  +      +I G    G   +    +      GL      
Sbjct: 200 FVDEGF--EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYV 257

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           +  +I  L  +G  +EA  +F+E+   G +P      AL+ GY   G +  A  +   + 
Sbjct: 258 FTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G   D  TY++ I  Y   GR   A  V  EM      PN   Y+ ++      GE  
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
             ++++K M  SG+ PD     +++D   K   L  A+  F++++  G+ PD  ++  LI
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                  R   A  L  +M  +   P   TY+ +I+ L    R  +  RLL  M  +G L
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P+ +TY+ L+D   +    D           +AV  F  M   GL+P  +    +I+ + 
Sbjct: 498 PDTITYSILLDALWKKQHLD-----------EAVFLFNQMIKRGLEPDVMCYTIMIDGYC 546

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + +R  EA  + + M    L PD+VTYT L  A+ +
Sbjct: 547 KSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 202/480 (42%), Gaps = 26/480 (5%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQR-------------QRLTPLTYNALISACARNDDL 209
           E+ Y ILI+ L  + ++ EA  L +               +   + Y+ +I    RN  +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++     ++M  +G   +   Y  +I+ L    K        L  E+    +++   +  
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF--GLVDEMIRRGLDVSVYVFT 259

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
            +I G  K G   +A          G  P   T  A++      G    A  +F+ + E 
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G K     YN  + GY K+G ++DA  V  EM R GV+P+  TY+ LID    AG    A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             ++K M  S   P+      +L G        +   +  ++  SG+ PD   Y ++I  
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
                 +  AM     M  + + P  +T++ LID   + GR   A  L  EM  +G  P 
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T TY+I+++ L +++  ++   L   M  +GL P+V+ YT ++D Y +S R D+AI    
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAI---- 555

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                  N FR M    L P  +    L NA  +   ++  +  +  +++    P V+ Y
Sbjct: 556 -------NLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 161/386 (41%), Gaps = 69/386 (17%)

Query: 321 AVFEELKESGLKPRTKAYNALLKGY-VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           ++F ++ + G    T A N +LKG  V  G LK  EF   E+  +G   +E +Y +LI+ 
Sbjct: 93  SIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEF-HDEIVNNGFSLNEVSYGILING 151

Query: 380 YANAGRWESARIVLK-------------------------------------------EM 396
               GR   A  +L+                                           EM
Sbjct: 152 LCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEM 211

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
             +   PN F Y  ++ G    G++   F ++ EM   G++   + + V+ID   K   L
Sbjct: 212 MGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGML 271

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   FD M++ G EP+ +T   L+  +   G  D A ELF+ + E G+     TYN+ 
Sbjct: 272 VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVF 331

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-------------- 562
           I+   +  R  D  R+   M  +G++PN+VTY +L+D   ++G                 
Sbjct: 332 IHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGL 391

Query: 563 --DAIEC---LEGLS-----DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
             D + C   L+GL      DQA+  F  +   GL P   +   LI+     +R  EA  
Sbjct: 392 TPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMN 451

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIR 638
           +L+ M    L P +VTY+ L+  L R
Sbjct: 452 LLRDMHLKNLVPHIVTYSCLIDGLCR 477



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 7/182 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
           Y+ILIH    S ++ EA  L +   L  L     TY+ LI    R+  +  A  L+++M 
Sbjct: 433 YTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMH 492

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D I YS+++ +L +   +D ++   L+ ++    +E D      +I G+ K+  
Sbjct: 493 VKGPLPDTITYSILLDALWKKQHLDEAVF--LFNQMIKRGLEPDVMCYTIMIDGYCKSER 550

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+          L P   TY  +  A+  SG           +++    PR   Y A
Sbjct: 551 IDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLA 610

Query: 341 LL 342
            L
Sbjct: 611 AL 612


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 212/470 (45%), Gaps = 26/470 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
             + +L+ A A   D+  AL+ + +M+ +G     + YS++I    +TN  +S+   KL+
Sbjct: 289 FVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESA--DKLF 346

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           KE +     L+G + +++I    ++G+  +A   +   +  G+      Y +++   + +
Sbjct: 347 KEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVA 406

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               +   VFE LKE G +P   +Y  L+  YVK+G +  A  V  EME  G+  +  TY
Sbjct: 407 QDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTY 466

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S+LI+ + +   + +A  + ++M  S  +P+  IY+ ++  +   G   R  ++ + MK 
Sbjct: 467 SMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKK 526

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
             ++P    +  +I+ F     +  A+   D M   G  P  +T+N LI    +  + +R
Sbjct: 527 ERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVER 586

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  + ++M   G  P   TY I++                  ++  GL  +V  Y TL+ 
Sbjct: 587 AVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 646

Query: 554 IYGQSGRFDDAIECLEGLSDQ------------------------AVNAFRVMRTDGLKP 589
              +SGR   A+     +S Q                        A +  + M+ DG+ P
Sbjct: 647 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPP 706

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +     S INA  +      A  V+Q M + GLKP+V T+TTL+K   +V
Sbjct: 707 NIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKV 756



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 225/494 (45%), Gaps = 34/494 (6%)

Query: 164 LLYSILIHA------LGRSEKLYEAFLLSQRQRLTPL-TYNALISACARNDDLEKALNLM 216
           ++YS +IHA      + R+E+L     + +     P+  Y++++       D +K L + 
Sbjct: 359 IIYSNIIHAHCQSGNMDRAEELVRE--MEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVF 416

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            ++++ G+    I+Y  +I    +  K+  +L   + KE+E   I+ + +  + +I GF 
Sbjct: 417 ERLKECGFRPSIISYGCLINLYVKIGKVPKAL--AVSKEMESHGIKHNNKTYSMLINGFI 474

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              D + A          GL P  A Y  ++ A    G    A  +FE +K+  ++P  +
Sbjct: 475 HLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNR 534

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            +  +++G+   G +K A   +  M RSG  P   TY+ LI       + E A  VL +M
Sbjct: 535 TFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKM 594

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            ++   PN   Y+ I+ GY   G+  + F+   ++K SG++ D + Y  ++    K   +
Sbjct: 595 SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 654

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+A    M  + I  +T  +N LID   + G    A +L ++M+E G  P   T+   
Sbjct: 655 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSY 714

Query: 517 INLL---GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           IN     G+ +R E+V + + ++   GL PNV T+TTL+  + +             L D
Sbjct: 715 INACCKAGDMQRAENVIQEMADV---GLKPNVKTFTTLIKGWAKV-----------SLPD 760

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVV 627
           +A+  F  M++ GLKP   A + L+ +        E        +V + M EN L  D+ 
Sbjct: 761 RALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDLR 820

Query: 628 TYTTLMKALIRVDK 641
           T     K L  +++
Sbjct: 821 TAVHWSKWLHEIER 834



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 184/459 (40%), Gaps = 59/459 (12%)

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D    +  ++ +    IE +  +   ++  +A A D   A+  +   +  GL     TY+
Sbjct: 268 DKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYS 327

Query: 305 AVI--------------------TALSN---------------SGRTIEAEAVFEELKES 329
            +I                    T L N               SG    AE +  E++E 
Sbjct: 328 ILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEED 387

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+      Y++++ GY      K    V   ++  G  P   +Y  LI+ Y   G+   A
Sbjct: 388 GIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKA 447

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V KEME    K N+  YS ++ G+    ++   F + ++M  SG++PD   YN++++ 
Sbjct: 448 LAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEA 507

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F K   +  A+  F+RM  E ++P   T+  +I+     G   RA +  + M+  G  P 
Sbjct: 508 FCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPT 567

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--- 566
             TYN +I+ L  + + E    +L  M   G+ PN  TYT ++  Y  SG    A E   
Sbjct: 568 VMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFT 627

Query: 567 ---------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                C  G    A+   R M    +  +    N LI+ +    
Sbjct: 628 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 687

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              EA  +++ MKE+G+ P++ T+T+ + A  +     +
Sbjct: 688 DVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQR 726



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 151/350 (43%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++   +  G    A A FE ++  G++P    + +L+  Y     ++ A   
Sbjct: 251 PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 310

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS+LI  Y      ESA  + KE +      N  IYS I+  +  
Sbjct: 311 VEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQ 370

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G   R  ++++EM+  G++     Y+ M+  +         +  F+R+   G  P  I+
Sbjct: 371 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIIS 430

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A  + +EM+  G      TY+++IN       + +   +  +M 
Sbjct: 431 YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  LV+ +           C  G  D+A+  F  M+ + ++PSN     +
Sbjct: 491 KSGLQPDRAIYNLLVEAF-----------CKMGNMDRAIRIFERMKKERMQPSNRTFRPI 539

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  F        A   L  M+ +G  P V+TY  L+  LIR  +  +  S
Sbjct: 540 IEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVS 589



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 28/254 (11%)

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +WQ      + +     +P    + +M+  + K    HHA A F+ M + GIEP+   + 
Sbjct: 237 DWQAVVSAFERIP----KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFT 292

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           +L+  +        A    EEM+  G      TY+I+I   G+    E   +L    + +
Sbjct: 293 SLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTK 352

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------------------- 578
               N + Y+ ++  + QSG  D A E +  + +  ++A                     
Sbjct: 353 LDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKC 412

Query: 579 ---FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  ++  G +PS ++   LIN + +  +  +A AV + M+ +G+K +  TY+ L+  
Sbjct: 413 LIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLING 472

Query: 636 LIRVDKFHKVFSSY 649
            I +  F   FS +
Sbjct: 473 FIHLHDFANAFSIF 486


>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 163/333 (48%), Gaps = 14/333 (4%)

Query: 306 VITALSNSGRTIEAEAVFEELK-ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +I  L+  G       VF  +K +     RT  YN +++ + +      A  +  EM++ 
Sbjct: 120 LIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKC 179

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              PD  TY+ LI+A+  AG+W  A  ++ +M  +   P+   Y+ ++      G W+  
Sbjct: 180 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 239

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             V K+M  +GV PD   +N+M+  F        A++ F+ +    I PDT T N +I C
Sbjct: 240 LNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHC 299

Query: 485 HFKCGRYDRAEELFEEMQERG--YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             K  +YD+A ++F  M+E+     P   T+  MI+L       E+ +     M A+GL 
Sbjct: 300 LVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLK 359

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+V+Y  L+  Y              G+ ++A+  F  ++ +G +P  ++  SL+NA+G
Sbjct: 360 PNIVSYNALLGAYAA-----------RGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYG 408

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             ++  +A  + + +K N LKP++V+Y  L+ A
Sbjct: 409 RSRKPQKAREIFKMIKRNNLKPNIVSYNALIDA 441



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 178/349 (51%), Gaps = 13/349 (3%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +T  Y  +I   +   RT +A  +F E+++   KP  + YNAL+  + + G  + A  ++
Sbjct: 149 RTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIM 208

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M R+ + P   TY+ LI+A  ++G W+ A  V K+M  +   P+   ++ +L  ++  
Sbjct: 209 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSG 268

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTI 476
            ++ +     + +K + + PDT  +N++I    K      A+  F+ M  +  E  PD +
Sbjct: 269 TQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVV 328

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ ++I  +  CG  +  E  F  M   G  P   +YN ++     +    +  ++   +
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           +  G  P+VV+YT+L++ YG+S +   A E            F++++ + LKP+ ++ N+
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKARE-----------IFKMIKRNNLKPNIVSYNA 437

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
           LI+A+G +    +A  +L+ M+++ + P+VV+  TL+ A  R  +  K+
Sbjct: 438 LIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKI 486



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 233/494 (47%), Gaps = 26/494 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI+A GR+ +   A  +     R  + P   TYN LI+AC  + + ++ALN+  KM 
Sbjct: 188 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 247

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   D + +++++ +     +   +L    ++ I+   I  D    N +I    K   
Sbjct: 248 DNGVGPDLVTHNIMLTAFKSGTQYSKAL--SYFELIKGTHIRPDTTTHNIIIHCLVKLKQ 305

Query: 281 ASKAMR-FLGMAQGVG-LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
             KA+  F  M +      P   T+ ++I   S  G     EA F  +   GLKP   +Y
Sbjct: 306 YDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSY 365

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NALL  Y   G   +A  V +E++++G  PD  +Y+ L++AY  + + + AR + K ++ 
Sbjct: 366 NALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKR 425

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           ++ KPN   Y+ ++  Y   G  +   ++L+EM+   + P+      ++   G+      
Sbjct: 426 NNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCG---- 481

Query: 459 AMAAFDRMLS----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
                D +LS     GI+ +T+ +N+ I  +   G YD+A +L+  M+++     + TY 
Sbjct: 482 QKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYT 541

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG-QSGRFDDAIECLEGLSD 573
           ++I+   +  ++ +    +  M    L  +   Y++++  Y  Q+      IE       
Sbjct: 542 VLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIE------- 594

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            A + F +M++ G  P  +   ++++A+   ++  + +A+ + M+EN +K D +    LM
Sbjct: 595 -AESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALM 653

Query: 634 KALIRVDKFHKVFS 647
           +A  +  +  +V S
Sbjct: 654 RAFNKGGQPGRVLS 667



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 199/429 (46%), Gaps = 28/429 (6%)

Query: 230 NYSLVIQSLTRTNKIDSSLL-------QKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           N+  +I+ LT+   I+   L       QK Y    C + ++     N +I   A+     
Sbjct: 116 NFPFLIRELTQRGSIEHCNLVFSWMKNQKNY----CARTDI----YNMMIRLHARHNRTD 167

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           +A       Q     P   TY A+I A   +G+   A  + +++  + + P    YN L+
Sbjct: 168 QARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 227

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
                 G  K+A  V  +M  +GV PD  T+++++ A+ +  ++  A    + ++ +H +
Sbjct: 228 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIR 287

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
           P++  ++ I+       ++ +   +   M  K S   PD   +  MI  +     + +  
Sbjct: 288 PDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCE 347

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           AAF+ ML+EG++P+ +++N L+  +   G  + A ++F E+++ G+ P   +Y  ++N  
Sbjct: 348 AAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAY 407

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G   + +  + +   ++   L PN+V+Y  L+D YG +G  +DAIE L           R
Sbjct: 408 GRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEIL-----------R 456

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M  D + P+ +++ +L+ A G   +  +   VL   +  G+K + V Y + + + I V 
Sbjct: 457 EMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVG 516

Query: 641 KFHKVFSSY 649
           ++ K    Y
Sbjct: 517 EYDKAIDLY 525



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 233/520 (44%), Gaps = 26/520 (5%)

Query: 142 SIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LT 195
           SI+    V SW++ + N C   ++ Y+++I    R  +  +A   F   Q+ R  P   T
Sbjct: 129 SIEHCNLVFSWMKNQKNYCARTDI-YNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAET 187

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YNALI+A  R      A+N+M  M +         Y+ +I +   +     +L   + K+
Sbjct: 188 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL--NVCKK 245

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +  + +  D    N ++  F      SKA+ +  + +G  + P T T+  +I  L    +
Sbjct: 246 MTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQ 305

Query: 316 TIEAEAVFEELKE--SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
             +A  +F  +KE  S   P    + +++  Y   G++++ E   + M   G+ P+  +Y
Sbjct: 306 YDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSY 365

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+ AYA  G    A  V  E++ +  +P+   Y+ +L  Y    + Q+  ++ K +K 
Sbjct: 366 NALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKR 425

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           + ++P+   YN +ID +G    L  A+     M  + I P+ ++  TL+    +CG+  +
Sbjct: 426 NNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVK 485

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            + +    + RG    T  YN  I        ++    L  +MR + +  + VTYT L+ 
Sbjct: 486 IDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLIS 545

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ----RDAE 609
              +  +F +A+  +E            M    L  S    +S+I A+ +      +  E
Sbjct: 546 GCCKMSKFGEALSFMEE-----------MMHLKLPMSKEVYSSIICAYSKQASALGQIIE 594

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           A +    MK  G  PDVVTYT ++ A    +K+ K+++ +
Sbjct: 595 AESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALF 634



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 105/493 (21%), Positives = 215/493 (43%), Gaps = 27/493 (5%)

Query: 154 QKHNLCYSYELLYSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDD 208
           +K + C+   + ++ +IH     G  E    AF +   + L P  ++YNAL+ A A    
Sbjct: 318 EKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGM 377

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
             +AL + ++++Q+G+  D ++Y+ ++ +  R+ K   +  ++++K I+ + ++ +    
Sbjct: 378 ENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKA--REIFKMIKRNNLKPNIVSY 435

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I  +   G    A+  L   +   + P   +   ++ A    G+ ++ + V    + 
Sbjct: 436 NALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEM 495

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+K  T AYN+ +  Y+ +G    A  + + M +  +  D  TY++LI       ++  
Sbjct: 496 RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGE 555

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRG-------EWQRTFQVLKEMKSSGVEPDTH 441
           A   ++EM       +  +YS I+  Y  +        E + TF +   MKS G  PD  
Sbjct: 556 ALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNL---MKSLGCSPDVV 612

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y  M+D +          A F+ M    ++ DTI    L+    K G+  R   L + M
Sbjct: 613 TYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSM 672

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +E+      T +  M++  G    W+    ++  M     + +       ++  G+SG+ 
Sbjct: 673 REKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKI 732

Query: 562 DDAIEC----LEGLSDQAVNAFRVMRTDGLKPSN----LALNSL--INAFGEDQRDAEAF 611
           +  ++     L   ++   N + ++  + L   N    L  NS+  +  F   ++ A   
Sbjct: 733 EIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEDNSVAAVMCFLLSKQLAMDA 792

Query: 612 AVLQYMKENGLKP 624
            VLQ+M++ G+ P
Sbjct: 793 RVLQWMEDAGIHP 805


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 12/365 (3%)

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYA-AVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           AGD   A+  L      G +    T   A++      G   EA  VF+E+   GL P   
Sbjct: 15  AGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEV 74

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y AL+ GY   G  +    +  EM R GV P+ +TY+ LI  +   G +E AR +  EM
Sbjct: 75  TYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEM 134

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            V     N   Y+ ++AG    G+     ++L  M++ G  P    +N+++D +GK   +
Sbjct: 135 PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKM 194

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            +A+  F++M + G +P  +T+N LI    +     RA     +M+ERG  P   TY I+
Sbjct: 195 SNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTIL 254

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+    +        +L  M   GL  +  TY  LV              C+EG    A 
Sbjct: 255 IDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRAL-----------CMEGNMKDAR 303

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             F+ M   G++PSN+  + +I  +G +    +A  ++  M++ GL P+  +Y   ++ L
Sbjct: 304 KLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVL 363

Query: 637 IRVDK 641
            + DK
Sbjct: 364 CKDDK 368



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 13/394 (3%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S L  L +  +     LD      ++ G  K GD ++A R       +GL+P   TY A+
Sbjct: 20  SALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTAL 79

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +      G+  +  A+FEE++  G++P    YN L+  + + G  + A  +  EM   G+
Sbjct: 80  MHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGI 139

Query: 367 LPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + +  +Y+ LI      G+ W++A++ L  M     +P+   ++ ++ GY   G+     
Sbjct: 140 VRNVVSYNTLIAGLCRHGKLWDAAKL-LDMMRTEGTRPSIITFNLLVDGYGKAGKMSNAL 198

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
               +MK++G +P    YN++I  F +   +  A  A   M   G+EP  +T+  LID  
Sbjct: 199 PFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSF 258

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +     +A E+   M++ G      TY +++  L  +   +D ++L  +M  +G+ P+ 
Sbjct: 259 ARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSN 318

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           V Y  ++  YG+           EG S +A+     MR  GL P++ +    I    +D 
Sbjct: 319 VIYDMMIYGYGR-----------EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           +  EA A+L  M   GL+        L+ A  R+
Sbjct: 368 KCQEAEALLDDMVRAGLQTSESICQALLDAKARL 401



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 9/327 (2%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E+ Y+ L+H     G+ EK +  F   +R  + P   TYN LI    R  + E+A +L  
Sbjct: 73  EVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFD 132

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           +M   G   + ++Y+ +I  L R  K+ D++   KL   +  +         N ++ G+ 
Sbjct: 133 EMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA---KLLDMMRTEGTRPSIITFNLLVDGYG 189

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KAG  S A+ F    +  G  P   TY  +I     +     A     ++KE GL+P   
Sbjct: 190 KAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKV 249

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y  L+  + +  ++  A  +++ ME++G+  D HTY +L+ A    G  + AR + + M
Sbjct: 250 TYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSM 309

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                +P++ IY  ++ GY   G   +  +++ EM+  G+ P++  Y + I    K +  
Sbjct: 310 GEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKC 369

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLID 483
             A A  D M+  G++        L+D
Sbjct: 370 QEAEALLDDMVRAGLQTSESICQALLD 396



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 11/228 (4%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G+     +V  EM   G+ P+   Y  ++  +  +       A F+ M   G+EP+  T+
Sbjct: 52  GDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY 111

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N LI    + G ++RA  LF+EM  RG      +YN +I  L    +  D  +LL  MR 
Sbjct: 112 NCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT 171

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G  P+++T+  LVD YG++G+  +A+             F  M+  G +PS +  N LI
Sbjct: 172 EGTRPSIITFNLLVDGYGKAGKMSNALP-----------FFNQMKAAGFQPSAVTYNMLI 220

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             F   +    A   L  MKE GL+P  VTYT L+ +  R +   K F
Sbjct: 221 AGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAF 268



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 7/197 (3%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y++LI    R+  +  A   L   ++R    T +TY  LI + AR + + KA  +++ M 
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D   Y +++++L     +  +  +KL++ +    +E    + + +I G+ + G 
Sbjct: 276 KAGLEVDAHTYGVLVRALCMEGNMKDA--RKLFQSMGEKGVEPSNVIYDMMIYGYGREGS 333

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
           + KA++ +   +  GL P +A+Y   I  L    +  EAEA+ +++  +GL+       A
Sbjct: 334 SYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQA 393

Query: 341 LLKGYVKMGYLKDAEFV 357
           LL    ++    +  FV
Sbjct: 394 LLDAKARLRGSANVSFV 410


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 203/462 (43%), Gaps = 13/462 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T + ++        +E  + L+      G   + + Y+ +I    +  +++S+   KL+K
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAY--KLFK 267

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++        Q    ++ GF K G        L   +  GLS     Y  +I A    G
Sbjct: 268 KLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLG 327

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             I+A+   +E+ E+  +P    YN L+  +   G +++AE ++ +  R G+ P++ TY+
Sbjct: 328 FDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYT 387

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L+  Y   G +  A   L EM  S  + +   Y  ++ G    GE      +   M + 
Sbjct: 388 PLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR 447

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD + YNV+++   K   L  A      ML + I PD   + TL+D   + G  D A
Sbjct: 448 GILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEA 507

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           ++LF+ + E+G  P    YN+MI    +    ++    +  MR    +P++ T++T++D 
Sbjct: 508 KKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDG 567

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y +    +  ++            F +M     KP+ +   SLIN +        A  + 
Sbjct: 568 YVKQHNMNAVLK-----------IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLF 616

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
             M+ +GLKP VVTY+ L+ +  +  K  K  S +    I K
Sbjct: 617 SMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINK 658



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 15/442 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN LI    +  ++E A  L  K++  G+      +  ++    +    ++  +  L  E
Sbjct: 246 YNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA--IDLLLLE 303

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   + ++ Q+ N++I    K G   KA   L         P   TY  +I    + G 
Sbjct: 304 MKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGE 363

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG-YLKDAEFVVSEMERSGVLPDEHTYS 374
             EAE + E+    GL P    Y  L+ GY K G Y K  ++++ EM  SG+  D  +Y 
Sbjct: 364 VEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLI-EMSTSGLEVDMISYG 422

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI     AG  ++A  +   M      P++ IY+ ++ G   +G+      +L EM   
Sbjct: 423 ALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
            + PD   Y  ++D F ++  L  A   F  ++ +G++P  + +N +I    K G  D A
Sbjct: 483 NIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNA 542

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
               ++M+   + P   T++ +I+   +Q     V ++ G M  Q   PNVVTYT+L++ 
Sbjct: 543 ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLING 602

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           Y           C +G +  A   F +MR+ GLKPS +  + LI +F ++ +  +A +  
Sbjct: 603 Y-----------CRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYF 651

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
           + M  N   P+   +  L+   
Sbjct: 652 ELMLINKCTPNDAAFHYLVNGF 673



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 209/451 (46%), Gaps = 24/451 (5%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKAL 213
           C    + Y+ LI    +  ++  A+ L ++ ++     T  T+ +L++   +    E   
Sbjct: 239 CVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAID 298

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L+ +M+  G   +   Y+ +I +  +    D      L KE+  +  E D    N +I 
Sbjct: 299 LLLLEMKDRGLSVNVQMYNNIIDARYKLG-FDIKAKDTL-KEMSENCCEPDLVTYNTLIN 356

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
            F   G+  +A + L      GL+P   TY  ++      G   +A     E+  SGL+ 
Sbjct: 357 HFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEV 416

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +Y AL+ G V  G +  A  +   M   G+LPD + Y++L++     G+   A+++L
Sbjct: 417 DMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRG---EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            EM   +  P++F+Y+ ++ G+   G   E ++ FQ++ E    G++P    YNVMI  F
Sbjct: 477 TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIE---KGLDPGVVGYNVMIKGF 533

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   + +A+   D+M      PD  T++T+ID + K    +   ++F  M ++   P  
Sbjct: 534 SKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNV 593

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TY  +IN    +   +  ++L   MR+ GL P+VVTY+ L+      G F     C E 
Sbjct: 594 VTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILI------GSF-----CKEA 642

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
              +AV+ F +M  +   P++ A + L+N F
Sbjct: 643 KLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/325 (20%), Positives = 136/325 (41%), Gaps = 32/325 (9%)

Query: 165 LYSILIHALGRSEKLYEA-FLLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +Y++L++ L +  KL  A  +L++   Q + P    Y  L+    R+ +L++A  L   +
Sbjct: 455 IYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLI 514

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLL--QKLYKEIECDKIELDGQLLNDVIVGFAK 277
            + G     + Y+++I+  +++  +D+++L   K+ +      I       + +I G+ K
Sbjct: 515 IEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDI----FTFSTIIDGYVK 570

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
             + +  ++  G+       P   TY ++I      G T  AE +F  ++  GLKP    
Sbjct: 571 QHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVT 630

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y+ L+  + K   L  A      M  +   P++  +  L++ + N      +R      E
Sbjct: 631 YSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSR------E 684

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            ++   NS            R  ++  F     M   G       YN ++    +   + 
Sbjct: 685 PNNLHENS------------RSMFEDFFS---RMIGDGWTQKAAAYNCILICLCQQRMVK 729

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLI 482
            A+   ++ML+ G+  D +++  LI
Sbjct: 730 TALQLRNKMLAFGLCSDAVSFVALI 754



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 18/238 (7%)

Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           F L  +Q   P  +TY +LI+   R  + + A  L S MR  G     + YS++I S  +
Sbjct: 581 FGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG------------DASKAM--R 286
             K+  ++    ++ +  +K   +    + ++ GF                + S++M   
Sbjct: 641 EAKLGKAV--SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFED 698

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           F     G G + K A Y  ++  L        A  +  ++   GL     ++ AL+ G  
Sbjct: 699 FFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGIC 758

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
             G  K+   ++S     G L     YSL +D +   G    A  +L+ M   +  PN
Sbjct: 759 LEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
          Length = 870

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 57/418 (13%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
           +I  +A++G A++AM  L   +G GL P T +Y AVI A    G  +      F ++ + 
Sbjct: 250 LISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQD 309

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           GL P  K +N+LL    + G+L+DA  V  EM   G   D +TY+  +DA    G    A
Sbjct: 310 GLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLA 369

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             V+ +ME ++AKPN   YS ++ G+    ++    ++ ++MKS  ++ D   YN ++  
Sbjct: 370 LQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAI 429

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + K           + M   GIE DT+T+N+LI+ + K GR D    L ++M+ +G  P 
Sbjct: 430 YVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPS 489

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             TY+ +I++  +     D   +  + +  GL  +VV +++ +D   ++G     +EC  
Sbjct: 490 VLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNG----LVECAL 545

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ------------------------ 605
            L D+       M   G+KP+ +  N++I+AFG+ +                        
Sbjct: 546 SLLDE-------MMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGVYGGQVVR 598

Query: 606 ------------------RDAEAFAVL---QYMKENGLKPDVVTYTTLMKALIRVDKF 642
                             R  E F +L   Q M + G++P+VVT++ ++ A  R + F
Sbjct: 599 VTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSF 656



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 186/423 (43%), Gaps = 20/423 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARND-DLEKALNLMSKM 219
           +S LI A  RS    EA  + +       R T ++YNA+I AC +   DL   L    +M
Sbjct: 247 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 306

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            QDG   D   ++ ++ + +R   ++ +  + ++ E+       D    N  +    K G
Sbjct: 307 LQDGLCPDRKTFNSLLAACSRAGHLEDA--RTVFDEMIHLGSGRDIYTYNTFVDAICKCG 364

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           +   A++ +   +     P   TY+ ++   S   +  EA  + E++K   ++     YN
Sbjct: 365 NMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYN 424

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            LL  YVK G   +   V  EME+ G+  D  TY+ LI+ Y   GR +    ++++M   
Sbjct: 425 TLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQ 484

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+   YS ++  Y   G     F V  + K SG++ D   ++  IDT  K   +  A
Sbjct: 485 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECA 544

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           ++  D M+  GI+P+ +T+NT+ID   K   +   +    +M   G +           +
Sbjct: 545 LSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEEDSDIGDMGIVGVYGGQVVRVTNPVI 604

Query: 520 LGEQERWEDVK-----------RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            G +    DV+            L   M  QG+ PNVVT++ +++   +   F+DA   L
Sbjct: 605 RGGRSA-TDVRMRRSQELFFILELFQKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLL 663

Query: 569 EGL 571
           E L
Sbjct: 664 EQL 666



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 16/283 (5%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG-EWQRTFQVLKEM 431
           +S LI AYA +G    A  VL+ M+ +  +P +  Y+ ++      G + + T    ++M
Sbjct: 247 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQM 306

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ PD   +N ++    +   L  A   FD M+  G   D  T+NT +D   KCG  
Sbjct: 307 LQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNM 366

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A ++  +M+     P   TY+ +++   + E++++  +L   M++  +  + V Y TL
Sbjct: 367 GLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTL 426

Query: 552 VDIYGQSGRFDD-AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR-DAE 609
           + IY ++G++D+ A  C E            M   G++   +  NSLIN +G+  R D  
Sbjct: 427 LAIYVKTGKYDEIATVCEE------------MEKLGIEKDTVTYNSLINGYGKQGRLDMV 474

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           AF V Q M+  G+ P V+TY+TL+    +       F+ YL F
Sbjct: 475 AFLV-QDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDF 516


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 202/422 (47%), Gaps = 32/422 (7%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           L  + YN ++ A  +   +E+A+ L+++M+      D ++Y+ +I       K+  +  +
Sbjct: 400 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA--K 457

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
            +++E++   IE D    N ++ GF++ G   +A+  L      GL P +AT+  +I  L
Sbjct: 458 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 517

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             +G+  EAEA    L++  L+     Y+A++ GY K  + + A  + S + + G+L  +
Sbjct: 518 CMAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILVKK 573

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            +   L+ +    G ++ A I+L+ M     +PN  +Y +++  +   G+ +R   V   
Sbjct: 574 KSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDM 633

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG- 489
           +   G+ PD   Y +MI+ + + NCL  A   F+ M   GI+PD IT+  ++D H K   
Sbjct: 634 LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNL 693

Query: 490 ------RYDRAEE--------LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
                 ++ +  E         + EM+E G  P    Y ++I+   +    +D   L   
Sbjct: 694 KMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDE 753

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M A+GL P++VTYT L+           +  C  G  D+A+     M   G++P + A++
Sbjct: 754 MIARGLQPDIVTYTALL-----------SSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802

Query: 596 SL 597
            L
Sbjct: 803 VL 804



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 241/515 (46%), Gaps = 23/515 (4%)

Query: 133 LKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQ 189
           ++ LCS   S DL Y  +  L+  N        Y+ +I       KL EA   F+    +
Sbjct: 269 IEGLCSHKRS-DLGYEALRALRAANWPID-TFAYTAVIRGFCSEMKLKEAEDVFIDMVNE 326

Query: 190 RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS 247
            + P    Y ALI A  +  +L +A+ L + M  +G   + +  S ++Q L         
Sbjct: 327 GIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEV 386

Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           + Q  +KE     I LD  L N V+    K G   +A+  L   +G  +S     Y  +I
Sbjct: 387 VDQ--FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLI 444

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
                 G+ ++A+ +FEE+KE G++P    YN L+ G+ + G  K+A  ++  +   G+ 
Sbjct: 445 AGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLK 504

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  T++ +I+    AG+ + A   L  +E    +     YS ++ GY      ++ +++
Sbjct: 505 PNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYEL 560

Query: 428 LKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
              +   G+         ++ +    G+Y+    A+   +RML+  +EP+ I +  LI  
Sbjct: 561 FSRLSKQGILVKKKSCFKLLSSLCMEGEYD---KALILLERMLALDVEPNQIMYGKLIGA 617

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             + G   RA+ +F+ + ERG  P   TY +MIN         + + +  +M+ +G+ P+
Sbjct: 618 FCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPD 677

Query: 545 VVTYTTLVDIYGQSG-RFDDAIECLEGLSDQAVNA---FRVMRTDGLKPSNLALNSLINA 600
           V+TYT ++D + +   +   +++  +G  ++ ++A   +  M+  G+KP  +    LI++
Sbjct: 678 VITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDS 737

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             +     +A  +   M   GL+PD+VTYT L+ +
Sbjct: 738 HCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSS 772



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 205/457 (44%), Gaps = 21/457 (4%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +R  L P   TY   I A  R  + E+A+++  +M + G + + +  S  I+ L    + 
Sbjct: 219 KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKR- 277

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATY 303
            S L  +  + +      +D      VI GF       +A   F+ M    G++P    Y
Sbjct: 278 -SDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNE-GIAPDGYIY 335

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A+I A   +G  ++A A+  ++  +G+K      +++L+   +MG   +      E   
Sbjct: 336 GALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRD 395

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
           SG+  DE  Y++++DA    G+ E A  +L EM+      +   Y+ ++AGY  +G+   
Sbjct: 396 SGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVD 455

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              + +EMK  G+EPD   YN+++  F +      A+   D + ++G++P++ T N +I+
Sbjct: 456 AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIE 515

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
                G+   AE     ++++    C   Y+ M++   +         L   +  QG+L 
Sbjct: 516 GLCMAGKVKEAEAFLNTLEDK----CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILV 571

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
              +   L+      G +D A+  LE          R++  D ++P+ +    LI AF  
Sbjct: 572 KKKSCFKLLSSLCMEGEYDKALILLE----------RMLALD-VEPNQIMYGKLIGAFCR 620

Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
           D     A  V   + E G+ PDV+TYT ++    RV+
Sbjct: 621 DGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 11/375 (2%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           +L+ ++  + + G   +A+  L   +  G  P   +   ++  L   G+   A A++  L
Sbjct: 159 VLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHL 218

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           K  GL P    Y   +K   + G  ++A  V  EME +GV P+  T S  I+   +  R 
Sbjct: 219 KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRS 278

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           +     L+ +  ++   ++F Y+ ++ G+    + +    V  +M + G+ PD + Y  +
Sbjct: 279 DLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGAL 338

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I  + K   L  A+A  + M+S GI+ + +  ++++ C  + G      + F+E ++ G 
Sbjct: 339 IHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGI 398

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
           F     YNI+++ L +  + E+   LL  M+ + +  +VV YTTL+  Y           
Sbjct: 399 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY----------- 447

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           CL+G    A N F  M+  G++P  +  N L+  F  +    EA  +L  +   GLKP+ 
Sbjct: 448 CLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 507

Query: 627 VTYTTLMKALIRVDK 641
            T+  +++ L    K
Sbjct: 508 ATHNRIIEGLCMAGK 522



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 24/206 (11%)

Query: 163 ELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +++Y  LI A  R   +  A   F +   + +TP  +TY  +I+   R + L +A ++ +
Sbjct: 608 QIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFN 667

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTN----------------KIDSSLLQKLYKEIECDKI 261
            M++ G   D I Y++V+   ++ N                K+D+S      KE+    I
Sbjct: 668 DMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEM---GI 724

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           + D      +I    K  +   A+         GL P   TY A++++  + G    A  
Sbjct: 725 KPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAIT 784

Query: 322 VFEELKESGLKPRTKAYNALLKGYVK 347
           +  E+   G++P ++A + L +G +K
Sbjct: 785 LVNEMSFKGIEPDSRAMSVLHRGILK 810



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 11/105 (10%)

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           ++    LV  Y + G FD+AI+ L          F+  R  G  P  ++ N L+N   E 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDAL----------FQTKRR-GFVPHIMSCNFLMNRLIEH 205

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +   A A+ +++K  GL P+  TY   +KAL R   F +    +
Sbjct: 206 GKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVF 250


>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Brachypodium distachyon]
          Length = 637

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 204/411 (49%), Gaps = 19/411 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----L 184
           +++L +  +    +D AY V   + K   C      Y+ILI   G++ + Y+       +
Sbjct: 224 YNMLLDALAKAGMVDQAYQVFEDM-KQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEM 282

Query: 185 LSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +S+   L  + YN +I A  +N  ++K + ++SKM +     +   YSL +  L    + 
Sbjct: 283 VSRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQ- 341

Query: 245 DSSLLQKLYKEIE-CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
               L +L + ++ CD+  L+  + + ++    K+G AS+A            S     +
Sbjct: 342 ----LHRLNEVLDICDRY-LNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAF 396

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---E 360
            +++  L NSG+T+EA  +   + E G+      YN +   +  +G LK   F+ +   +
Sbjct: 397 ISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMV---FSALGKLKQVSFISTLFDK 453

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M+ SG+ PD  TY+++I +Y   G  + A  + +EME S  KP+   Y+ ++      G+
Sbjct: 454 MKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGD 513

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                 + KEM+  G +PD   Y+ +I+ FGK N +  A + FD M++EG  P+ +T+N 
Sbjct: 514 LDEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNI 573

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
           L+DC  + G+   A + +E M+++G  P + TY+I+  L    +R   +++
Sbjct: 574 LLDCLERRGKTAEAHKHYETMKQQGLTPDSITYSILERLESRSQRTARIRK 624



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 194/443 (43%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           RL   TY  ++ A  R+ ++ K   +  +M + GY  D   Y++++ +L +   +D +  
Sbjct: 183 RLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAY- 241

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            +++++++      D      +I    K G   K + F       G +     Y  VI A
Sbjct: 242 -QVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEA 300

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L  +    +   V  ++ ES  +P    Y+  L      G L     V+   +R     +
Sbjct: 301 LGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDR---YLN 357

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +  YS L+ +   +G    A  V   M  SH   +   +  +L    + G+      +L 
Sbjct: 358 KSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLH 417

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            M   G++ D   YN++    GK   +      FD+M + GI PD  T+N +I  + + G
Sbjct: 418 MMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVG 477

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             D+A  LFEEM+     P   TYN +IN LG+    ++   L   M+ +G  P+V TY+
Sbjct: 478 LVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYS 537

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL++ +G+S + D            A + F  M  +G  P+ +  N L++      + AE
Sbjct: 538 TLIECFGKSNKVD-----------MACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAE 586

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
           A    + MK+ GL PD +TY+ L
Sbjct: 587 AHKHYETMKQQGLTPDSITYSIL 609



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 186/442 (42%), Gaps = 25/442 (5%)

Query: 211 KALNLMSK--MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           + L L  K  +R +GY      Y  ++Q+  R+ ++      ++Y+E+     +LD    
Sbjct: 172 RCLELAKKWGLRLNGY-----TYKCIVQAHLRSREVSKGF--EVYEEMHRKGYKLDIFAY 224

Query: 269 NDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
           N ++   AKAG   +A + F  M Q   + P   TY  +I     +G+T +  + F+E+ 
Sbjct: 225 NMLLDALAKAGMVDQAYQVFEDMKQKYCV-PDAYTYTILIRMSGKTGQTYKFLSFFDEMV 283

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
             G      AYN +++   K   +    FV+S+M  S   P++ TYSL +D  A  G+  
Sbjct: 284 SRGCALNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLH 343

Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
               VL   ++     N  IYS ++      G       V   M +S    D   +  M+
Sbjct: 344 RLNEVL---DICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISML 400

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           +          A+     M  +GI+ D   +N +     K  +      LF++M+  G  
Sbjct: 401 EVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIA 460

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYNIMI+  G     +    L   M A    P+V+TY TL++  G++G  D     
Sbjct: 461 PDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLD----- 515

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
                 +A   F+ M+  G  P     ++LI  FG+  +   A ++   M   G  P++V
Sbjct: 516 ------EAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIV 569

Query: 628 TYTTLMKALIRVDKFHKVFSSY 649
           TY  L+  L R  K  +    Y
Sbjct: 570 TYNILLDCLERRGKTAEAHKHY 591



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 191/451 (42%), Gaps = 47/451 (10%)

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G+  D  +Y+ ++  L R+ K D     +L  ++E D +  +   +N ++       + +
Sbjct: 113 GFRHDAFSYNRILALLFRS-KADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVA 171

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
              R L +A+  GL     TY  ++ A   S    +   V+EE+   G K    AYN LL
Sbjct: 172 ---RCLELAKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLL 228

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
               K G +  A  V  +M++   +PD +TY++LI      G+         EM      
Sbjct: 229 DALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCA 288

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID---TFGKYNCLHHA 459
            N   Y+ ++          +   VL +M  S  +P+   Y++ +D   T G+ + L+  
Sbjct: 289 LNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEV 348

Query: 460 MAAFDRMLSEGI---------------EPDTI---TWNT-----------LIDCHFKCGR 490
           +   DR L++ I               E   +    WN+           +++     G+
Sbjct: 349 LDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGK 408

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
              A +L   M E+G       YN++ + LG+ ++   +  L   M+A G+ P++ TY  
Sbjct: 409 TLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNI 468

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           ++  YG+ G           L D+A   F  M     KP  +  N+LIN  G++    EA
Sbjct: 469 MISSYGRVG-----------LVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEA 517

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             + + M+E G  PDV TY+TL++   + +K
Sbjct: 518 HILFKEMQEKGYDPDVFTYSTLIECFGKSNK 548



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/400 (19%), Positives = 167/400 (41%), Gaps = 35/400 (8%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKP 333
           F    D  +A+R +   +  G++   +T    +  L   G      A   EL K+ GL+ 
Sbjct: 129 FRSKADPGEALRLVAQMERDGVAGNIST----VNLLVGMGGGGVEVARCLELAKKWGLRL 184

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
               Y  +++ +++   +     V  EM R G   D   Y++L+DA A AG  + A  V 
Sbjct: 185 NGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVF 244

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           ++M+  +  P+++ Y+ ++      G+  +      EM S G   +   YN +I+  GK 
Sbjct: 245 EDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEALGKN 304

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +   +    +M+    +P+  T++  +D     G+  R  E+ +       +   + Y
Sbjct: 305 KMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDR---YLNKSIY 361

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           + ++  L +     +   +   M       +   + +++++   SG+  +AI+ L  + +
Sbjct: 362 SYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPE 421

Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           + ++                         F  M+  G+ P     N +I+++G      +
Sbjct: 422 KGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDK 481

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
           A  + + M+ +  KPDV+TY TL+  L +   +D+ H +F
Sbjct: 482 ASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILF 521


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/535 (23%), Positives = 236/535 (44%), Gaps = 23/535 (4%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL---YSILIH 171
           + + E Y   P  + ++ L N    N  +D+A  +   + +    +  +L+   YSI+I 
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 172 ALGRSE--KLYEAF-LLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGY 224
             G  +  K+ E   L+  R      P  + YN +I    +  DL++A  +  +++  G+
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
                 Y  +I    +  K    ++ +L  E+    + ++ ++ N +I    K G   KA
Sbjct: 272 LPTLETYGALIDGFCKAGKF--QVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKA 329

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              + M   +G  P   TY  +I    + GR  EAE   E  KE  L P   +Y  L+  
Sbjct: 330 AEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHA 389

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           Y K G    A  ++ ++  +G  PD  +Y   I      G  + A +V ++M      P+
Sbjct: 390 YCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPD 449

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
           + IY+ +++G   +G +     +L EM    ++PD + Y  ++D F + N L  A   F+
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            ++S+GI+P  + +N +I    KCG+   A     +M+   + P   T++ +I+   +Q 
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
             +   ++ G M  Q   PNVV YT+L++ +           C      +A   FR M++
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGF-----------CKIADMSRAEKVFRAMQS 618

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             L+P+ +    LI  F +  +  +A +  + M  N   P+  T+  L+  L  +
Sbjct: 619 FNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNI 673



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 209/502 (41%), Gaps = 57/502 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDG--YHCDFI--NYSLVI--QSLTRTNKIDSSLLQ 250
           N+L++   +N  ++ A  L  KM + G  +  D +  NYS+VI  + L    K++    +
Sbjct: 168 NSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEG--R 225

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           KL  +   +    +    N +I G+ K GD  +A R     +  G  P   TY A+I   
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF 285

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
             +G+    + +  E+   GL    K +N+++    K G +  A  ++  M   G  PD 
Sbjct: 286 CKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDI 345

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW--------- 421
            TY++LI+   + GR + A   L+  +     PN F Y+ ++  Y  +G++         
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405

Query: 422 --------------------------QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
                                          V ++M   GV PD   YNV++    K   
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
              A      ML   ++PD   + TL+D   +    D+A ELFE +  +G  P    YN+
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           MI  L +  +  D    +  M+     P+  T++T++D Y +    D A++         
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALK--------- 576

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M     KP+ +A  SLIN F +    + A  V + M+   L+P+VVTYT L+  
Sbjct: 577 --MFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGG 634

Query: 636 LIRVDKFHKVFSSYLFFNIYKM 657
             +  K  K  S   FF +  M
Sbjct: 635 FSKTGKPEKAAS---FFELMLM 653



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 180/419 (42%), Gaps = 57/419 (13%)

Query: 166 YSILIHALGRSEKLYEA--FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI+      ++ EA  FL   ++R L P   +Y  L+ A  +  D   A +++ K+ 
Sbjct: 348 YNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIA 407

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   D ++Y   I       +ID +L+ +  +++    +  D Q+ N ++ G  K G 
Sbjct: 408 ETGDKPDLVSYGAFIHGSVAGGEIDVALMVR--EKMMEKGVFPDAQIYNVLMSGLCKKGR 465

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A   L     + L P    YA ++     +    +A  +FE +   G+ P    YN 
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++KG  K G + DA   V++M+ +   PDE+T+S +ID Y      +SA  +  +M    
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY------- 453
            KPN   Y+ ++ G+    +  R  +V + M+S  +EP+   Y ++I  F K        
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAA 645

Query: 454 ---------NCL------HHAMAA-------------------------FDRMLSEGIEP 473
                    NCL      H+ +                           F  M+SEG   
Sbjct: 646 SFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQ 705

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQERWEDV 529
              T+N++I C  K G  D A+ L  +M  +G+   +  ++ +++ L   G+ + W ++
Sbjct: 706 VIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNI 764



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 26/328 (7%)

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-RIVLKE 395
           AY++LLK  VK     + E V+ +M+     P     + +I  YA  G  + A ++    
Sbjct: 95  AYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMV 154

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG---- 451
            E+ +  P     + +L      G+     ++  +M   G +   H  ++++D +     
Sbjct: 155 CELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGD---HGLDLVVDNYSIVIV 211

Query: 452 -KYNC----LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
            K  C    +       D     G  P+ + +N +ID + K G   RA  +FEE++ +G+
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY  +I+   +  +++ V +LL  M   GL  NV  + +++D   +         
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKY-------- 323

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
              GL D+A    R+M   G +P     N LIN      R  EA   L+  KE  L P+ 
Sbjct: 324 ---GLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNK 380

Query: 627 VTYTTLMKALIRVDKFHKVFSSYLFFNI 654
            +YT LM A  +   +  V +S + F I
Sbjct: 381 FSYTPLMHAYCKQGDY--VMASDMLFKI 406


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 184/419 (43%), Gaps = 24/419 (5%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S +  L K+++   I  D   L  VI  F        A+  L     +G  P TAT+  +
Sbjct: 73  STVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L   G+  EA  VF+++   G +P    Y  L+ G  K   L +A  + SEM   G+
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  TY+ LI A  N   W+    +L EM  S   PN    + ++      G+      
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD 252

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V+  M   GVEPD   Y  ++D     + +  A+  FD M+  G   + +++NTLI+ + 
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K  R D+A  LFEEM  +   P T TY+ +I+ L    R +D   L   M A G +PN+V
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372

Query: 547 TYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVM 582
           TY+ L+D   ++ R  +A+                         C  G  + A + F  +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
              GL+P     N +I    +     EA  + + M ENG   +  TY T+ + L++ +K
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNK 491



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 175/399 (43%), Gaps = 7/399 (1%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           ++ L+  L    K+ EA      ++ +  +   +TY  L++   ++  L +ALNL S+M 
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D   Y+ +I +L   N  +   +  L  E+   KI  +   LN V+    K G 
Sbjct: 189 AKGISPDIFTYNSLIHAL--CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            ++A   + M    G+ P   TYAA++          EA  VF+ +  +G      +YN 
Sbjct: 247 VTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNT 306

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY K+  +  A ++  EM R  ++P+  TYS LI    + GR + A  +  EM    
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PN   YS +L              +LK ++ S ++PD   YN+ ID   +   L  A 
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  +   G++PD  T N +I    K G  D A +LF EM E G      TYN +   L
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGL 486

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            +  +     +LL  M A+G   +V T   LV +    G
Sbjct: 487 LQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 10/404 (2%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T+  L+        + +AL++  KM  +G+  + + Y  ++  L +  ++  +L   L+ 
Sbjct: 128 TFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL--NLFS 185

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    I  D    N +I       +       L       + P   +   V+ AL   G
Sbjct: 186 EMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEG 245

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  V + + + G++P    Y AL+ G+     + +A  V   M R+G + +  +Y+
Sbjct: 246 KVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYN 305

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+ Y    R + A  + +EM      PN+  YS ++ G    G  Q    +  EM + 
Sbjct: 306 TLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVAC 365

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  P+   Y++++D   K + L  AMA    +    ++PD   +N  ID   + G  + A
Sbjct: 366 GQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAA 425

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +LF  +  RG  P   T+NIMI  L ++   ++  +L   M   G L N  TY T+   
Sbjct: 426 RDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQG 485

Query: 555 YGQSGRFDDAIECLEGLSDQAVNA--------FRVMRTDGLKPS 590
             Q+ +   AI+ LE +  +  +A         +++  DGL  S
Sbjct: 486 LLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQS 529



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A + F  +      P    +  LL    KM +      +  +M+  G+ PD +T +++I
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 378 DAYANAGRWESARIVL-KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +++ +  R + A  VL K +++ H +P++  ++ ++ G    G+      V  +M   G 
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGH-QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +P+   Y  +++   K   L  A+  F  M+++GI PD  T+N+LI        +     
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L  EM +    P   + NI+++ L ++ +  +   ++  M   G+ P+VVTY  L+D + 
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH- 276

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     CL    D+AV  F +M  +G   + ++ N+LIN + + QR  +A  + + 
Sbjct: 277 ----------CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           M    L P+ +TY+TL+  L  V +     + +
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 8/260 (3%)

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LT 195
           S +D A  V   + + N C    + Y+ LI+   + +++ +A  L +   RQ L P  +T
Sbjct: 280 SEMDEAVKVFDMMVR-NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y+ LI        L+ A+ L ++M   G   + + YS+++  L + +++  ++   L K 
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM--ALLKA 396

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           IE   ++ D Q+ N  I G  +AGD   A          GL P   T+  +I  L   G 
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +F E+ E+G       YN + +G ++      A  ++ EM   G   D  T +L
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 376 LIDAYANAGRWESARIVLKE 395
           L+   ++ G  +S + +L E
Sbjct: 517 LVKMLSDDGLDQSVKQILCE 536



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A+++F RML     P    +  L+    K   Y     L ++M   G  P   T
Sbjct: 34  FNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYT 93

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
             I+IN      R +    +L  +   G  P+  T+TTLV              C+ G  
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGL-----------CVVGKI 142

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F  M  +G +P+ +   +L+N   +D++  EA  +   M   G+ PD+ TY +L
Sbjct: 143 GEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202

Query: 633 MKALIRVDKFHKV 645
           + AL  + ++  V
Sbjct: 203 IHALCNLCEWKHV 215



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 7/203 (3%)

Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           YS LIH L    +L +A      +++  Q    +TY+ L+    +N  L +A+ L+  + 
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 D   Y++ I  + R   ++++  + L+  +    ++ D    N +I G  K G 
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAA--RDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A +        G      TY  +   L  + +T  A  + EE+   G          
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 341 LLKGYVKMGYLKDAEFVVSEMER 363
           L+K     G  +  + ++ E  R
Sbjct: 517 LVKMLSDDGLDQSVKQILCEFMR 539


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 209/456 (45%), Gaps = 17/456 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++YN +I    +  D++KA     +M       D + Y+ +I +L++   +D ++     
Sbjct: 12  VSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM----- 66

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    +  +    N ++ G+  +G + KA+         G+ P   TY +++  L  +
Sbjct: 67  -EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA  +F+ + + GLKP    Y  LL GY   G L +   +++ M ++G+  D H +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++LI AY    + +   +V  +M      PN+  Y  ++ G    G         ++M  
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   Y  +I     Y+    A      +L +GI P+ + +NT++D   K GR   
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           +++LF+ +   G  P   TY+ +I+      + +   +LL  M + GL P+ VTY+TL++
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y +  R +DA+             F+ M ++G+ P  +  N +++     +R A A  +
Sbjct: 366 GYCKINRMEDALA-----------LFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKEL 414

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              + E+G + ++ TY  ++    + +     F  +
Sbjct: 415 YARITESGTQLELSTYNIILMDFAKTNSLMMHFGCF 450



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 28/327 (8%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P   +YN ++ G  K G +  A     EM    V PD  TY+ +I A + A   + A  V
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L  M      PN F Y+ I+ GY   G+ ++   + ++M S G+EPD   YN ++D   K
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A   FD M+  G++PD  T+ TL+  +   G      +L   M + G       
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           +NI+I    +QE+ ++V  +   MR QGL PN V Y T++D   + GR DDA+   E + 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 573 DQAVNAFRVMRT------------------------DGLKPSNLALNSLINAFGEDQRDA 608
           D+ +    V+ T                         G+ P+ +  N+++++  ++ R  
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKA 635
           E+  +   +   G+ PDV+TY+TL+  
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDG 331



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 143/339 (42%), Gaps = 51/339 (15%)

Query: 166 YSILIHALGRSEKLYE-----AFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  L+H       L E     A ++    +L    +N LI A  + + +++ + + SKMR
Sbjct: 150 YGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + +NY  VI  L +  ++D ++L                         F +  D
Sbjct: 210 QQGLTPNAVNYRTVIDGLCKLGRLDDAMLN------------------------FEQMID 245

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                         GL+P    Y ++I AL    +  +AE +  E+ + G+ P    +N 
Sbjct: 246 K-------------GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNT 292

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L    K G + +++ +   +   GV PD  TYS LID Y  AG+ + A  +L  M    
Sbjct: 293 ILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+S  YS ++ GY      +    + KEM+S+GV PD   YN+++    +      A 
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAK 412

Query: 461 AAFDRMLSEGIEPDTITWN-TLID--------CHFKCGR 490
             + R+   G + +  T+N  L+D         HF C R
Sbjct: 413 ELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFR 451



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           +++ILI A  + EK+ E  L                              + SKMRQ G 
Sbjct: 184 VFNILICAYTKQEKVDEVVL------------------------------VFSKMRQQGL 213

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
             + +NY  VI  L +  ++D ++L   ++++    +  +  +   +I          KA
Sbjct: 214 TPNAVNYRTVIDGLCKLGRLDDAMLN--FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKA 271

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
              +      G++P    +  ++ +L   GR IE++ +F+ L   G+ P    Y+ L+ G
Sbjct: 272 EELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDG 331

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           Y   G +  A  +++ M   G+ PD  TYS LI+ Y    R E A  + KEME +   P+
Sbjct: 332 YCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPD 391

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
              Y+ IL G           ++   +  SG + +   YN+++  F K N L      F
Sbjct: 392 IITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCF 450



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 55/262 (20%)

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI--------------- 482
           PD   YN +ID   K   +  A   +  ML   + PD +T+N++I               
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 483 -------DC-------HFKC--GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
                  +C       H  C  G+ ++A  +F +M   G  P   TYN +++ L +  + 
Sbjct: 69  LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD-----AIECLEGLS--------- 572
            + +++  +M  +GL P++ TY TL+  Y   G   +     A+    G+          
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 573 ----------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
                     D+ V  F  MR  GL P+ +   ++I+   +  R  +A    + M + GL
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 623 KPDVVTYTTLMKALIRVDKFHK 644
            P+VV YT+L+ AL   DK+ K
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEK 270


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 216/446 (48%), Gaps = 14/446 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N L++A  R + + +  +L +KM   G + D     +++++  +  +++ +  ++ ++E 
Sbjct: 189 NILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEA--EEYFRET 246

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   ++LD    + +I    K  +++  +  L   +  G  P  AT+ +VI A    G  
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +EA  + EE+   G         +L+KGY   G L  A  + +++   G+ P++ TYS+L
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+   N+G  E A  +  +M+++   P+ F  + +L GY     W+   ++  E    GV
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             +   YN+M+    K   +  A +  D M+++G+ P+ +++N +I  H + G  D A  
Sbjct: 427 A-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +F +M  R   P   TY+I+I+   ++   E    L   M +  + P   T+ T+++   
Sbjct: 486 VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           + G+  +A + L+   ++           G  PS +  NS+++ F ++     A AV + 
Sbjct: 546 KVGQMSEARDKLKNFLEE-----------GFIPSCMTYNSIVDGFIKEGNIDSALAVYRE 594

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKF 642
           M E G+ P+VVTYT+L+    + ++ 
Sbjct: 595 MCEFGVSPNVVTYTSLINGFCKSNRI 620



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 192/407 (47%), Gaps = 13/407 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
            TYN ++S   +   +++A +L+  M   G   + ++Y+ +I    R   +D  +   ++
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD--MASSVF 487

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++    ++ +    + +I G  K GD+ KA+        + ++P   T+  +I  L   
Sbjct: 488 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+  EA    +   E G  P    YN+++ G++K G +  A  V  EM   GV P+  TY
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI+ +  + R + A     EM     + +   YS ++ G+  R + +    +  E+  
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN MI  F   N +  A+  + +M+++ I  D  T+ TLID   K GR   
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVF 727

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A +L+ EM  +G  P   T+++++N L  + + E+ +++L  M  + + P+V+ Y TL+ 
Sbjct: 728 ASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIA 787

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            Y + G   +A    + + D+           GL P ++  + LIN 
Sbjct: 788 GYFREGNLKEAFTLHDEMLDR-----------GLVPDDVTYDILING 823



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 211/469 (44%), Gaps = 28/469 (5%)

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
           CA+ + L+ ALNL +K+ +DG   + + YS++I+    +  I+ +   +LY +++ + I 
Sbjct: 336 CAQGN-LDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKA--SELYTQMKLNGIP 392

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
                +N ++ G+ KA    +A +    A   G++    TY  +++ L   G+  EA ++
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSL 451

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
            + +   G+ P   +YN ++ G+ + G +  A  V S+M    + P+  TYS+LID    
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G  E A  +  +M   +  P  F ++ I+ G    G+       LK     G  P    
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN ++D F K   +  A+A +  M   G+ P+ +T+ +LI+   K  R D A +  +EM+
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ----- 557
           E+G     T Y+ +I+   ++   E  + L   +   GL PN + Y +++  +       
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 558 ------SGRFDDAIEC--------LEGLSDQ-----AVNAFRVMRTDGLKPSNLALNSLI 598
                     +D I C        ++GL  +     A + +  M + G+ P  +  + L+
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           N      +   A  +L+ M    + P V+ Y TL+    R     + F+
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/523 (23%), Positives = 230/523 (43%), Gaps = 35/523 (6%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQ 187
           SL+K  C+   ++D A  + + + +  L +  ++ YS+LI      G  EK  E +   +
Sbjct: 330 SLMKGYCAQ-GNLDSALNLFNKITEDGL-FPNKVTYSVLIEGCCNSGNIEKASELYTQMK 387

Query: 188 RQRLTPLTYN--ALISACARNDDLEKALNLMSKMRQDGYHCDFIN---YSLVIQSLTRTN 242
              + P  +N  +L+    +    E+A    SK+  +   C   N   Y++++  L +  
Sbjct: 388 LNGIPPSVFNVNSLLRGYLKAPLWEEA----SKLFDEAVDCGVANIFTYNIMMSWLCKGG 443

Query: 243 KID--SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
           K+D   SLL  +  +     +       ND+I+G  + G+   A           L P  
Sbjct: 444 KMDEACSLLDNMVNQGMVPNV----VSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 499

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY+ +I      G + +A  +F+++    + P    +N ++ G  K+G + +A   +  
Sbjct: 500 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 559

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
               G +P   TY+ ++D +   G  +SA  V +EM      PN   Y+ ++ G+     
Sbjct: 560 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 619

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                +   EM+  G+E D   Y+ +ID F K   +  A   F  +L  G+ P+ I +N+
Sbjct: 620 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 679

Query: 481 LIDCHFKCGRYDRAEELFEEM-QERGYFPCT-TTYNIMINLLGEQERWEDVKRLLGNMRA 538
           +I         + A   +++M  +R   PC   TY  +I+ L ++ R      L   M +
Sbjct: 680 MISGFRDLNNMEAALVWYKKMINDR--IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS 737

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           +G++P+++T+  LV+     G+ ++A + LE            M    + PS L  N+LI
Sbjct: 738 KGIVPDIITFHVLVNGLCNKGQLENARKILEE-----------MDRKNMTPSVLIYNTLI 786

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             +  +    EAF +   M + GL PD VTY  L+    + D+
Sbjct: 787 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/516 (21%), Positives = 216/516 (41%), Gaps = 52/516 (10%)

Query: 166 YSILIHAL-------GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           Y +L+H L       G + KL   ++ S     +P+ +   +  CA+  D E        
Sbjct: 97  YCVLLHILMRSPETHGHARKLLNRYV-SGDSDPSPVVFVDHLINCAKRFDFE-------- 147

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
                   D   ++ ++ +  R N+I++++    +  + C  +      +N ++    + 
Sbjct: 148 -------LDHRVFNYLLNAYIRANRIENAI--DCFNAMICQDVIPWVPYMNILLTALVRR 198

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
               +           G+     T   ++ A    GR  EAE  F E KE G+K    AY
Sbjct: 199 NMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAY 258

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           + +++   K         ++ EM+  G +P E T++ +I A    G    A + LKE  +
Sbjct: 259 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA-LRLKEEMI 317

Query: 399 SHAKP-NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +  KP N  + + ++ GY  +G       +  ++   G+ P+   Y+V+I+       + 
Sbjct: 318 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   + +M   GI P     N+L+  + K   ++ A +LF+E  + G      TYNIM+
Sbjct: 378 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMM 436

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL--------- 568
           + L +  + ++   LL NM  QG++PNVV+Y  ++  + + G  D A             
Sbjct: 437 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 496

Query: 569 ---------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                          +G S++A++ F  M +  + P++   N++IN   +  + +EA   
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           L+   E G  P  +TY +++   I+        + Y
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 592



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 107/496 (21%), Positives = 190/496 (38%), Gaps = 48/496 (9%)

Query: 189 QRLTPLTYNALISA--CARNDDLEKALNLMSKMR-QDGYHCDFINYSLVIQSLTRTNKID 245
           Q  TPL+ N +I A  C  ND  + AL    +   Q G+      Y +++  L R+ +  
Sbjct: 53  QETTPLSQNHVIDALLCHVNDP-QSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETH 111

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
               +                LLN  + G +           +  A+          +  
Sbjct: 112 GHARK----------------LLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNY 155

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ A   + R   A   F  +    + P     N LL   V+   + +   + ++M   G
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           +  D  T  +++ A    GR E A    +E +    K ++  YS I+     +       
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275

Query: 426 QVLKEMKSSGVEP-DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+EMK  G  P +  F +V++    + N +  A+   + M++ G   + +   +L+  
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGN-MVEALRLKEEMINCGKPMNLVVATSLMKG 334

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           +   G  D A  LF ++ E G FP   TY+++I         E    L   M+  G+ P+
Sbjct: 335 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394

Query: 545 VVTYTTLVDIYGQ-------SGRFDDAIE----------------CLEGLSDQAVNAFRV 581
           V    +L+  Y +       S  FD+A++                C  G  D+A +    
Sbjct: 395 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDN 454

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR--- 638
           M   G+ P+ ++ N +I           A +V   M    LKP+VVTY+ L+    +   
Sbjct: 455 MVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGD 514

Query: 639 VDKFHKVFSSYLFFNI 654
            +K   +F   L  NI
Sbjct: 515 SEKALDLFDQMLSLNI 530


>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 212/435 (48%), Gaps = 38/435 (8%)

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +++  + + G+    + Y+ ++ +LT     DS  +  +  ++E + +E D    N VI 
Sbjct: 93  SILDSIIEGGHKPSLVTYTTLLAALTIQKHFDS--IHSIISQVEENGMEPDSIFFNAVIN 150

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLK 332
            F+++G+  +AM++    +  G  P T+T+  +I     +G   E++ + E + ++  ++
Sbjct: 151 AFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVR 210

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P  + YN L++ +     +  A  VV +M  SG+ PD  TY+ +  AYA  G    A  +
Sbjct: 211 PNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGI 270

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           + EM+ S+ +PN      I+ GY   G+ +   Q +  MK  G++P+   +N +I  F  
Sbjct: 271 ILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGF-- 328

Query: 453 YNCLHHAMAAFDR---------MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
                  + A DR         M   G++PD IT++T+++     G  D+  E+F++M +
Sbjct: 329 -------IDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381

Query: 504 RGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
               P    Y+I+       GE E+ E++   L  M   G  PNVV +TT+++ +  +GR
Sbjct: 382 ARIQPDAHVYSILAKGYVRAGEPEKAEEI---LNAMIKSGFHPNVVIFTTIINGWCSAGR 438

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            + AI+  E + +            G+ P+     +LI  +GE ++  ++  VLQ M+E 
Sbjct: 439 MEYAIKIFEKMCE-----------CGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEF 487

Query: 621 GLKPDVVTYTTLMKA 635
            ++P+  T   + +A
Sbjct: 488 NVQPEKTTLLLVAEA 502



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 176/366 (48%), Gaps = 3/366 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  L++A       +   +++S++ ++G   D I ++ VI + + +  +  ++  K +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAM--KYF 165

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSN 312
            +++    +      N +I G+  AG+  ++ + L  M+Q   + P   TY  ++ A  N
Sbjct: 166 WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCN 225

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
               ++A  V  ++  SGL+P    YN +   Y + G    AE ++ EM+ S V P+E T
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
             ++I  Y   G+ + A   +  M+    +PN  +++ ++ G+ D  +     +VL  M+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV+PD   ++ +++ +     +      FD M+   I+PD   ++ L   + + G  +
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AEE+   M + G+ P    +  +IN      R E   ++   M   G+ PN+ T+ TL+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465

Query: 553 DIYGQS 558
             YG++
Sbjct: 466 WGYGEA 471



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 41/339 (12%)

Query: 176 SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           S+KL E  L+SQ + + P   TYN L+ A     ++ KA N++ KM   G   D + Y  
Sbjct: 196 SQKLLE--LMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTY-- 251

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
                                              N +   +A+ G+AS+A   +   Q 
Sbjct: 252 -----------------------------------NTIATAYAQNGEASQAEGIILEMQN 276

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
             + P   T   +I      G+  EA      +K+ GL+P    +N+L+KG++       
Sbjct: 277 SNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              V++ ME  GV PD  T+S +++A++ AG  +  R +  +M  +  +P++ +YS +  
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   GE ++  ++L  M  SG  P+   +  +I+ +     + +A+  F++M   GI P
Sbjct: 397 GYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAP 456

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +  T+ TLI  + +  +  ++EE+ + M+E    P  TT
Sbjct: 457 NLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  E +++ + + E G KP    Y  LL       +      ++S++E +G+ PD   +
Sbjct: 86  GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-K 432
           + +I+A++ +G  + A     +M+ S +KP +  ++ ++ GY   GE + + ++L+ M +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P+   YNV++  +     +  A     +M++ G++PD +T+NT+   + + G   
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AE +  EMQ     P   T  I+I    ++ + ++  + +  M+  GL PN+V + +L+
Sbjct: 266 QAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLI 325

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                   F DA++      D       +M   G+KP  +  ++++NA+       +   
Sbjct: 326 K------GFIDAVD-----RDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCRE 374

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +   M +  ++PD   Y+ L K  +R  +  K
Sbjct: 375 IFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 28/299 (9%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++     GR +  + +L  +     KP+   Y+ +LA    +  +     ++ +++ +G
Sbjct: 78  LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +EPD+ F+N +I+ F +   +  AM  F +M   G +P T T+NTLI  +   G  + ++
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197

Query: 496 ELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +L E M Q+    P   TYN+++     ++       ++  M A GL P+ VTY T+   
Sbjct: 198 KLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATA 257

Query: 555 YGQSGRFDDA----IE--------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           Y Q+G    A    +E                    C EG   +A+     M+  GL+P+
Sbjct: 258 YAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPN 317

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +  NSLI  F +         VL  M+E G+KPDV+T++T+M A      +DK  ++F
Sbjct: 318 LVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 207/451 (45%), Gaps = 29/451 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN L+ +C R   +E    L   M   G   +   ++L+I++L  ++ +D++  ++L+ E
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAA--RELFDE 172

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +     + +      ++ G+ KAG   K +  L   +  G+ P    Y  ++++    GR
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGR 232

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL----PDEH 371
             ++E + E+++E GL P    +N+ +    K G + DA  + S+ME    L    P+  
Sbjct: 233 NDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+L++  +   G  E A+ + + +  +    +   Y+  L G    G++     VLK+M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ P  + YN+++D   K   L  A      M   G+ PD +T+  L+  +   G+ 
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A+ L +EM      P   T NI+++ L    R  + + LL  M  +G   + VT   +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           VD    SG  D AIE ++G           MR  G    + AL +L N++     D+   
Sbjct: 473 VDGLCGSGELDKAIEIVKG-----------MRVHG----SAALGNLGNSYIGLVDDS--- 514

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
                + EN   PD++TY+TL+  L +  +F
Sbjct: 515 -----LIENNCLPDLITYSTLLNGLCKAGRF 540



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 235/541 (43%), Gaps = 90/541 (16%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQR 188
           L++ LC S S +D A  +   + +   C   E  + IL+      G ++K  E     + 
Sbjct: 153 LIRALCDS-SCVDAARELFDEMPEKG-CKPNEFTFGILVRGYCKAGLTDKGLELLNSMES 210

Query: 189 QRLTP--LTYNALISA-C--ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
             + P  + YN ++S+ C   RNDD EK   L+ KMR++G   D + ++  I +L +  K
Sbjct: 211 FGVLPNKVVYNTIVSSFCREGRNDDSEK---LVEKMREEGLVPDIVTFNSRISALCKEGK 267

Query: 244 I-DSSLLQKLYKEIECDKI----ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
           + D+S   +++ ++E D+       +    N ++ GF K G    A       +      
Sbjct: 268 VLDAS---RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLV 324

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              +Y   +  L   G+ IEAE V +++ + G+ P   +YN L+ G  K+G L DA+ +V
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M+R+GV PD  TY  L+  Y + G+ ++A+ +L+EM  ++  PN++  + +L    + 
Sbjct: 385 GLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNM 444

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMI------------------------------- 447
           G      ++L++M   G   DT   N+++                               
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504

Query: 448 --------DTFGKYNCL-------------------HHAMAAFDRMLSEGIEPDTITWNT 480
                   D+  + NCL                     A   F  M+ E ++PD++ +N 
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNI 564

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
            I    K G+   A  + ++M+++G      TYN +I  LG + +  ++  L+  MR +G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG 624

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
           + PN+ TY T +    + G+ +D           A N    M    + P+  +   LI A
Sbjct: 625 ISPNICTYNTAIQYLCEGGKVED-----------ATNLLDEMMQKNIAPNVFSFKYLIGA 673

Query: 601 F 601
           F
Sbjct: 674 F 674



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 15/314 (4%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           KP    YN LL+  ++   ++   ++  +M   G+ P+ +T++LLI A  ++   ++AR 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  EM     KPN F +  ++ GY   G   +  ++L  M+S GV P+   YN ++ +F 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF---- 507
           +      +    ++M  EG+ PD +T+N+ I    K G+   A  +F +M+   Y     
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P + TYN+M+    +    ED K L  ++R    L ++ +Y   +    + G+F +A   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+ + D+           G+ PS  + N L++   +    ++A  ++  MK NG+ PD V
Sbjct: 349 LKQMIDK-----------GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAV 397

Query: 628 TYTTLMKALIRVDK 641
           TY  L+     V K
Sbjct: 398 TYGCLLHGYCSVGK 411



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 175/451 (38%), Gaps = 75/451 (16%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R   +TYN ++    +   LE A  L   +R++       +Y++ +Q L R  K   +  
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEA-- 345

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT- 308
           + + K++    I       N ++ G  K G  S A   +G+ +  G+SP   TY  ++  
Sbjct: 346 ETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405

Query: 309 ----------------------------------ALSNSGRTIEAEAVFEELKESGLKPR 334
                                             +L N GR  EAE +  ++ E G    
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSG-----------------------VLPDEH 371
           T   N ++ G    G L  A  +V  M   G                        LPD  
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TYS L++    AGR+  A+ +  EM     +P+S  Y+  +  +  +G+    F+VLK+M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G       YN +I   G  N +       D M  +GI P+  T+NT I    + G+ 
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGE-------QERWEDVKRLLGNMRAQGLLPN 544
           + A  L +EM ++   P   ++  +I    +       QE +E    + G  + +GL   
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICG--QKEGL--- 700

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
              Y+ + +    +G+   A E LE + D+ 
Sbjct: 701 ---YSLMFNELLAAGQLLKATELLEAVLDRG 728



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/406 (22%), Positives = 170/406 (41%), Gaps = 33/406 (8%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A  +  LL   CS    +D A +++  + ++N C       +IL+H+L    ++ EA  L
Sbjct: 396 AVTYGCLLHGYCSV-GKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWNMGRISEAEEL 453

Query: 186 SQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGY---------------- 224
            ++       L  +T N ++     + +L+KA+ ++  MR  G                 
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 225 -----HC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
                +C  D I YS ++  L +  +   +  + L+ E+  +K++ D    N  I  F K
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEA--KTLFAEMMGEKLQPDSLAYNIFIHHFCK 571

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S A R L   +  G      TY ++I  L    +  E   + +E++E G+ P    
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICT 631

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN  ++   + G ++DA  ++ EM +  + P+  ++  LI A+     ++ A+ V  E  
Sbjct: 632 YNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETA 690

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           VS       +YS +       G+  +  ++L+ +   G E  T  Y  ++ +  K + L 
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELE 750

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            A     +M+ +G   D      +ID   K G    A    E+M E
Sbjct: 751 VASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMME 796


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 216/490 (44%), Gaps = 18/490 (3%)

Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
           +Y+ LIHA   +  +  A      +LSQ  +L    + ++IS  A   + E A +   K 
Sbjct: 54  IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKF 113

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           + +      I Y+ ++Q+  +   +++  ++ L  ++E +  + +  L   V+ GFA+  
Sbjct: 114 KAENLVPGGIVYNSIVQAYCQAGNMET--VEALLAQMEEEGFQGNLGLYTTVLNGFAEIR 171

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D  K + F    +  GLSP  ATY  ++   + +G   +A  + EE+ + G+ P    Y 
Sbjct: 172 DEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYA 231

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++ GY + G    A  V  +M  +G+ PD   Y++L+ A+  AGR + A  VL+ +E +
Sbjct: 232 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 291

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P    Y+ IL GY   G  Q+  +V   +K++G+ P    YN ++    K   + +A
Sbjct: 292 RLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 351

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
               + ML+ G+ P+  ++  L + + + G  ++A  +F+ M++         Y  ++  
Sbjct: 352 RLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +    +    +   +   GL  N +TY T++D + + G    A + L           
Sbjct: 412 CCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLND--------- 462

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G     +   S I A        E    L  M+E  L+ +  TYTTL+   +  
Sbjct: 463 --MQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAA 520

Query: 640 DKFHKVFSSY 649
               +  S Y
Sbjct: 521 ADPDQAISCY 530



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 174/374 (46%), Gaps = 2/374 (0%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  +++  A   D EK L+   +++  G       Y  +++  T+   +  +L   + +E
Sbjct: 160 YTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKAL--DILEE 217

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++   +  +  +   ++ G+A+ GD + A +        GL P    Y  ++ A   +GR
Sbjct: 218 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGR 277

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +A  V E ++ + L P  + Y ++L GYVK G ++ A  V   ++ +G+ P   +Y+ 
Sbjct: 278 MDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 337

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L+   A A + E+AR++L EM  +   PN   Y+ +  GY   G+ ++ F + + MK   
Sbjct: 338 LLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 397

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +  D   Y  ++    K   +  A   F ++   G++ + IT+ T++D   + G   +A 
Sbjct: 398 LAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 457

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +L  +MQ+ G+   T  Y   I         E+V   L  MR + L  N  TYTTL+  +
Sbjct: 458 DLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 517

Query: 556 GQSGRFDDAIECLE 569
             +   D AI C E
Sbjct: 518 LAAADPDQAISCYE 531



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 172/375 (45%), Gaps = 11/375 (2%)

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           +A+ GD   A       +   + P    Y ++I A + +     A A  EE+   G++  
Sbjct: 27  YARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLN 86

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              + +++ GY   G  + AE    + +   ++P    Y+ ++ AY  AG  E+   +L 
Sbjct: 87  EAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLA 146

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +ME    + N  +Y+ +L G+ +  + ++       +K+ G+ P    Y  ++  F K  
Sbjct: 147 QMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAG 206

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
            +  A+   + M   G+ P+ + +  ++D + + G +  A +++E+M   G  P    YN
Sbjct: 207 NMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYN 266

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           I+++   +  R +    +L N+ A  LLP + TYT+++D Y + G    A+E        
Sbjct: 267 ILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE-------- 318

Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
               F  ++T GL+P  ++ NSL++   + ++   A  +L  M  NG+ P+  +YT L +
Sbjct: 319 ---VFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTE 375

Query: 635 ALIRVDKFHKVFSSY 649
              R     K F  +
Sbjct: 376 GYARAGDVEKAFGMF 390



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/452 (21%), Positives = 194/452 (42%), Gaps = 54/452 (11%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y L++    R    D    +  ++ +    I+ +  +   +I  +A+A D   A+     
Sbjct: 20  YGLLVDFYARHG--DKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEE 77

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
               G+    A + ++I+  +++G    AE  FE+ K   L P    YN++++ Y + G 
Sbjct: 78  MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN 137

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           ++  E ++++ME  G   +   Y+ +++ +A     E        ++     P +  Y  
Sbjct: 138 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 197

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           I+  +   G   +   +L+EM   GV P+   Y +++D + +      A   ++ M+S G
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257

Query: 471 IEPDTITWNTLIDCHFKCGRYD-----------------------------------RAE 495
           ++PD + +N L+    K GR D                                   +A 
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 317

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           E+F+ ++  G  P   +YN +++ L +  + E+ + +L  M A G++PN  +YT L + Y
Sbjct: 318 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGY 377

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRDAEAFA 612
            ++G             ++A   F+ M+ + L    +A  +L+ A    G  QR AE F 
Sbjct: 378 ARAGDV-----------EKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVF- 425

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             Q + + GLK + +TY T++    R  +  K
Sbjct: 426 --QQITDAGLKHNRITYCTMLDGWARKGELSK 455



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 137/289 (47%), Gaps = 7/289 (2%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTPL--TYNALISACARNDDLEKALNLMSK 218
           ++Y+IL+HA    GR +K        +  RL P   TY +++    +  +++KAL +  +
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDR 322

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           ++  G     ++Y+ ++  L +  +++++ L  +  E+  + +  + +    +  G+A+A
Sbjct: 323 IKTAGLRPGVVSYNSLLSGLAKARQMENARL--MLNEMLANGVVPNERSYTALTEGYARA 380

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           GD  KA       +   L+     Y A++ A   SG    A  VF+++ ++GLK     Y
Sbjct: 381 GDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITY 440

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
             +L G+ + G L  A  ++++M++ G   D   Y+  I A   +G  E     L  M  
Sbjct: 441 CTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMRE 500

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
              + N+  Y+ ++ G+    +  +     ++ K+SG++ D+   N ++
Sbjct: 501 KKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 549



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 7/186 (3%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L     R+  + +AF + QR +     +  + Y AL+ AC ++  +++A  +  ++ 
Sbjct: 370 YTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQIT 429

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + I Y  ++    R  ++  +  + L  +++     LD       I    ++GD
Sbjct: 430 DAGLKHNRITYCTMLDGWARKGELSKA--RDLLNDMQKHGFHLDTICYTSFIKACFRSGD 487

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +    L + +   L     TY  +I     +    +A + +E+ K SGL+  +   N 
Sbjct: 488 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNC 547

Query: 341 LLKGYV 346
           LL G +
Sbjct: 548 LLSGLI 553


>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 410

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 182/373 (48%), Gaps = 14/373 (3%)

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
           N   +I  L R  K+   L +++++ +    +         ++ G+AK G   +A     
Sbjct: 32  NCVTIISILGREGKL--GLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFE 89

Query: 290 MAQGVGLSPKTATYAAVITALSNSG-RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
             +  G SP   TY  +I A +    R  +   +FEE+K++G++P    YN ++   V +
Sbjct: 90  AMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCL 149

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
                A  ++ EM+    LP+  +Y+ +I++   +GR + A  + +EM+     PNS+ Y
Sbjct: 150 SLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTY 209

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + +L  Y   G +++   +   M+  G  PD + YN +ID  G+      A   F  M  
Sbjct: 210 NSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQR 269

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
           +G  PD +T+NT++D + K  R  RA +L + M+  G  P   TYNI+++  G+     +
Sbjct: 270 KGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASE 329

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++   ++A G  PN+V+++ L+++YG+ G F++           A  A+  MR  G  
Sbjct: 330 AMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEE-----------AERAWVEMRATGCV 378

Query: 589 PSNLALNSLINAF 601
           P+  A   L+N++
Sbjct: 379 PNATAYCGLMNSY 391



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 184/435 (42%), Gaps = 48/435 (11%)

Query: 146 AYAVVSWLQKHNLCYSYELL---YSILIHALGRSEKL---YEAFLLSQRQRLTPLT--YN 197
           A  V  +LQ+H     YEL       +I  LGR  KL    E F    +  + P    Y 
Sbjct: 13  ALQVFRFLQEH---LEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYT 69

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
           AL+S  A+   L++A  L   M++ G   + + Y+ +I + T+          + Y+   
Sbjct: 70  ALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTK----------RAYR--- 116

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
                     L D++  F +   A             G+ P   TY  ++ A        
Sbjct: 117 ----------LPDLVGLFEEMKQA-------------GVQPNDITYNCMVNACVCLSLFD 153

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
            A  + +E+K     P   +Y  ++    + G L +A  +  EM+  G  P+  TY+ L+
Sbjct: 154 TASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLL 213

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            AYA  GR+E A  +   ME     P+ + Y+ ++      G +     V  EM+  G  
Sbjct: 214 KAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCT 273

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   YN M+D + K++    A      M   G  PD  T+N L+D   K G    A ++
Sbjct: 274 PDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQI 333

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           F E++  G+ P   +++ +IN+ G    +E+ +R    MRA G +PN   Y  L++ Y  
Sbjct: 334 FHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYSH 393

Query: 558 SGRFDDAIECLEGLS 572
            G +   + C+  LS
Sbjct: 394 HGMY-KVLCCIRSLS 407



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 12/226 (5%)

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID-C 484
           ++ + M  +GV P  H Y  ++  + K   L  A A F+ M  +G  P+ +T+NTLI+ C
Sbjct: 51  EIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINAC 110

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             +  R      LFEEM++ G  P   TYN M+N       ++   ++L  M+A   LPN
Sbjct: 111 TKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPN 170

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           V++YTT+++  G+SGR D+A+E            F  M+  G  P++   NSL+ A+  +
Sbjct: 171 VISYTTMINSLGRSGRLDEAVE-----------LFEEMKELGRSPNSWTYNSLLKAYARE 219

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            R  +A  +   M++ G  PD+ TY T++    R   F +    +L
Sbjct: 220 GRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFL 265



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 47/302 (15%)

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           EH    +I      G+   AR + + M  +   P+   Y+ +L+GY  +G  +  + + +
Sbjct: 30  EHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFE 89

Query: 430 EMKSSGVEPDTHFYNVMIDTFGK--------------------------YNCLHHA---M 460
            MK  G  P+   YN +I+   K                          YNC+ +A   +
Sbjct: 90  AMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCL 149

Query: 461 AAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           + FD        M +    P+ I++ T+I+   + GR D A ELFEEM+E G  P + TY
Sbjct: 150 SLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTY 209

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           N ++     + R+E    L   M  +G +P++ TY T++D+ G+ G F +A    EG+  
Sbjct: 210 NSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEA----EGV-- 263

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                F  M+  G  P  +  N++++A+ +  R   A  +L+ MK  G  PD+ TY  L+
Sbjct: 264 -----FLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILL 318

Query: 634 KA 635
            A
Sbjct: 319 DA 320



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
           P  + ++ + N C   S  D A  ++  ++  N C    + Y+ +I++LGRS +L EA  
Sbjct: 134 PNDITYNCMVNACVCLSLFDTASQILKEMKAVN-CLPNVISYTTMINSLGRSGRLDEAVE 192

Query: 185 LSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L +  +    +P   TYN+L+ A AR    EKA+ L   M  +G   D   Y+ VI    
Sbjct: 193 LFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCG 252

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R      +  + ++ E++      D    N ++  ++K     +A   L   +  G +P 
Sbjct: 253 RGGLFAEA--EGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPD 310

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  ++ A   +G   EA  +F ELK +G  P   +++AL+  Y ++GY ++AE    
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWE 387
           EM  +G +P+   Y  L+++Y++ G ++
Sbjct: 371 EMRATGCVPNATAYCGLMNSYSHHGMYK 398



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 13/235 (5%)

Query: 418 RGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           RG  ++  QV + ++     E   H    +I   G+   L  A   F+ M   G+ P   
Sbjct: 7   RGARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVH 66

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE-RWEDVKRLLGN 535
            +  L+  + K G    A  LFE M+E+G  P   TYN +IN   ++  R  D+  L   
Sbjct: 67  AYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEE 126

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M+  G+ PN +TY  +V+          A  CL  L D A    + M+     P+ ++  
Sbjct: 127 MKQAGVQPNDITYNCMVN----------ACVCLS-LFDTASQILKEMKAVNCLPNVISYT 175

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           ++IN+ G   R  EA  + + MKE G  P+  TY +L+KA  R  ++ K    ++
Sbjct: 176 TMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFV 230


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 203/469 (43%), Gaps = 30/469 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +  L+++ A+       L+L ++M   G   +    +++I S    N++    S+L K+ 
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K       + D      +I G    G   +A+         G  P   TY  +I  L   
Sbjct: 119 KLGH----QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G T  A  +   +++   +P    Y +++    K   + +A  + S+M   G+ PD  TY
Sbjct: 175 GNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTY 234

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L+ A  N   W+    +L +M  S   P+  I+S ++      G+     +++  M  
Sbjct: 235 TSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GVEPD   Y  ++D     + +  A+  FD M+ +G  PD I++ TLI+ + K  + D+
Sbjct: 295 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDK 354

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LFEEM  + + P T TYN +++ L    R +D   L   M A+G +P++VTY+ L+D
Sbjct: 355 AMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLD 414

Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
              ++   ++A+                         C  G  + A + F  + + GL P
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHP 474

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           S    N +I+   +     EA  +   M  N   PD  TY T+ +  ++
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 202/488 (41%), Gaps = 52/488 (10%)

Query: 167 SILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
           +ILI++     ++  AF     +L    +  P T+  LI        + +AL+L  KM  
Sbjct: 95  NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
           +G+  + + Y  +I  L +     +++  +L + +E    + D  +   +I    K    
Sbjct: 155 EGFQPNVVTYGTLINGLCKVGNTSAAI--RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSN----------------------------- 312
           ++A        G G+SP   TY +++ AL N                             
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 313 ------SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
                  G+  EA  + + + + G++P    Y  L+ G+     + +A  V   M R G 
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            PD  +Y+ LI+ Y    + + A  + +EM      P++  Y+ ++ G    G  Q    
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +  EM + G  PD   Y++++D+  K   L  AMA    + +  + PD   +N +ID   
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  + A +LF  +  +G  P   TYNIMI+ L ++    +  +L   M      P+  
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 512

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA--------FRVMRTDGLKPSNLALNSLI 598
           TY T+   + Q+     AI+ LE +  +  +A          ++  DGL  S+  L  ++
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFL--ML 570

Query: 599 NAFGEDQR 606
           +   ED R
Sbjct: 571 SVLSEDDR 578



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 153/352 (43%), Gaps = 11/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +A ++T+++         ++  ++   G+ P     N L+  +  +  +  A  V
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++++ + G  PD  T++ LI      G+   A  +  +M     +PN   Y  ++ G   
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G      ++L+ M+    +PD   Y  +ID+  K   +  A   F +M+ +GI PD  T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           + +L+        +     L  +M      P    ++ +++ L ++ +  +   ++  M 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G+ P+VVTYTTL+D +           CL+   D+AV  F +M   G  P  ++  +L
Sbjct: 294 QRGVEPDVVTYTTLMDGH-----------CLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN + +  +  +A  + + M      PD  TY TLM  L  V +     + +
Sbjct: 343 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 11/197 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A+++F+R+L     P  + +  L+    K   Y     L  +M   G  P   T
Sbjct: 34  FNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 93

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            NI+IN      R      +L  +   G  P+  T+TTL+              C+EG  
Sbjct: 94  LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGL-----------CVEGKI 142

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F  M  +G +P+ +   +LIN   +    + A  +L+ M++   +PDVV YT++
Sbjct: 143 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 202

Query: 633 MKALIRVDKFHKVFSSY 649
           + +L +  +  + F+ +
Sbjct: 203 IDSLCKDRQVTEAFNLF 219


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 234/540 (43%), Gaps = 51/540 (9%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISA 202
           AV+S  +K N     E  + +++   GR   ++ A    +R R   +TP +  Y +LI A
Sbjct: 297 AVISAFEKINKPSRTE--FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 354

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN-------------KIDSSLL 249
            A   D+E+AL+ + KM+++G     + YS+++   ++               +I  +L 
Sbjct: 355 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLN 414

Query: 250 QKLY--------------------KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
             +Y                    +E+E + I+    + + ++ G+    D  K +    
Sbjct: 415 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFK 474

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
             +  G +P   TY  +I   +  G+  +A  V   +KE G+K   K Y+ ++ G+VK+ 
Sbjct: 475 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 534

Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
              +A  V  +M + G+ PD   Y+ +I A+   G  + A   +KEM+    +P +  + 
Sbjct: 535 DWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 594

Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
            I+ G+   G+ +R+ +V   M+  G  P  H +N +I+   +   +  A+   D M   
Sbjct: 595 PIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLA 654

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G+  +  T+  ++  +   G   +A E F  +Q  G      TY  ++    +  R +  
Sbjct: 655 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSA 714

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
             +   M A+ +  N   Y  L+D + + G   D  E        A +  + M+ +G+KP
Sbjct: 715 LAVTKEMSARNIPRNSFVYNILIDGWARRG---DVWE--------AADLIQQMKKEGVKP 763

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                 S I+A  +      A   ++ M+  G+KP++ TYTTL+K   R     K  S Y
Sbjct: 764 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 823



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 202/452 (44%), Gaps = 21/452 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYK 254
           Y+ ++       D +K L +  ++++ G+    + Y  +I   T+  KI  +L + ++ K
Sbjct: 453 YHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 512

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E   + ++ + +  + +I GF K  D + A          G+ P    Y  +I A    G
Sbjct: 513 E---EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMG 569

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A    +E+++   +P T+ +  ++ G+ K G ++ +  V   M R G +P  HT++
Sbjct: 570 NMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 629

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+      + E A  +L EM ++    N   Y++I+ GY   G+  + F+    +++ 
Sbjct: 630 ALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 689

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+E D   Y  ++    K   +  A+A    M +  I  ++  +N LID   + G    A
Sbjct: 690 GLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 749

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L ++M++ G  P   TY   I+   +        + +  M A G+ PN+ TYTTL+  
Sbjct: 750 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 809

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF--- 611
           + ++            L ++A++ +  M+  GLKP     + L+ +       AEA+   
Sbjct: 810 WARA-----------SLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYS 858

Query: 612 ---AVLQYMKENGLKPDVVTYTTLMKALIRVD 640
               + + M E GL  D+ T     + L +++
Sbjct: 859 GVMTICKEMVEAGLIVDMGTAVHWSRCLCKIE 890


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 235/535 (43%), Gaps = 40/535 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + ++L  LC +   +D A  V+  + +  +   Y    S L H L     +  AF L + 
Sbjct: 82  FTTILCGLCKAGK-MDEAELVMDEM-RSRMIPPYFATSSFLAHELCLRGSMERAFQLLE- 138

Query: 189 QRLTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
             + P+     YN ++ A  +   ++ AL L   M +        +   V+  L  + +I
Sbjct: 139 --IMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRI 196

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D +L  ++Y+E   ++ E     LN ++ GF   G   KA   L        +P   +Y 
Sbjct: 197 DEAL--QVYRE---NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYC 251

Query: 305 AVITALSNSGRTIEAEAVF--EELKESGLKPRT----KAYNALLKGYVKMGYLKDAEFVV 358
            V+  L  +GR  EA  +F   EL  S     +    + YN ++ G  +   + +A  + 
Sbjct: 252 TVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMF 311

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M    V PD  +Y +LID  A AG+   AR + +++  S   P++  Y+ ++ G    
Sbjct: 312 EKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMA 371

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
             +    ++  +M   G  P    YNVMID   K   L  A     +M+ +G  PD +T+
Sbjct: 372 NSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTY 431

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE---------RWEDV 529
           NT++D   K  R + A  LF EM+  G  P   ++N +I  L +Q          + ++ 
Sbjct: 432 NTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEA 491

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
            RLL  M   G +P+VVTY+TL+       R DDA   LE +  +             KP
Sbjct: 492 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC-----------KP 540

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + +  N+LI+   +  R  EA  VL  M  +G  PDVVTY TL+    R  +  +
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 194/426 (45%), Gaps = 18/426 (4%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LIH L  +    +A  L +   R     +P+TYN +I A  +   LE+A +L+ KM 
Sbjct: 361 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA-- 278
           +DG+  D + Y+ V+  L ++++++ +LL  L+ E+E      + +  N +I+G  +   
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALL--LFNEMERLGCTPNRRSHNTIILGLCQQSK 478

Query: 279 -------GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
                  G   +A R L      G  P   TY+ +I+ L +  R  +A  + E++ +   
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           KP     N L+ G  K G +K+A  V+  M  SG  PD  TY+ L+  +  AG+ E AR 
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L +M      PN   Y+ +++G            V  +MKSSG  P+   Y  +I  F 
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE--RGYFPC 509
               +   +  F  M+  GI PD + + TL     K GR  RA E+  E +E  R     
Sbjct: 659 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 718

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
              Y   ++ L E  + E     + +M   G LP      +LV    +SG+  +A   LE
Sbjct: 719 DEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 778

Query: 570 GLSDQA 575
            + D A
Sbjct: 779 EIMDLA 784



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 176/460 (38%), Gaps = 92/460 (20%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           L   VI G+   G   +A++   + +    SP    Y  +I +LS    T   + + + +
Sbjct: 12  LFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKMVQVM 70

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP------------------ 368
            + G  P +  +  +L G  K G + +AE V+ EM RS ++P                  
Sbjct: 71  VDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM-RSRMIPPYFATSSFLAHELCLRGS 129

Query: 369 --------------DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
                         +   Y++++ A   A R + A  + + M        +     +L G
Sbjct: 130 MERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG 189

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
             D G      QV +E +    EP     NV+++ F     +  A      M  E   PD
Sbjct: 190 LMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPD 246

Query: 475 TITWNTLIDCHFKCGRY-----------------------------------------DR 493
            +++ T++D   K GR                                          D 
Sbjct: 247 EVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDE 306

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++FE+M ER   P + +Y I+I+ L +  +  D + L   +   G+ P+ V YT+L+ 
Sbjct: 307 AVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIH 366

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
               +  FDDA E            F  M   G  PS +  N +I+A  +     EA  +
Sbjct: 367 GLCMANSFDDARE-----------LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
           ++ M E+G  PDVVTY T+M  L    K  +V  + L FN
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLC---KSSRVEEALLLFN 452



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 1/99 (1%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M  +GI P  + + ++I      GR   A ++F  M+E  + P    YN++I+ L +++ 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE-CHSPYPDVYNVLIDSLSKRQE 59

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            E VK+++  M  +G  P+  T+TT++    ++G+ D+A
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEA 98


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 206/448 (45%), Gaps = 18/448 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ--KLY 253
           Y  +I+A  ++  L+ +++  ++M   G    F+  S    +L       SS  Q  + +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKG----FVPGSNCFNNLLTFVVGSSSFNQWWRFF 152

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E +  K++LD      VI G  +AG+  K+   L   +  G SP    Y  +I      
Sbjct: 153 NESKI-KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKR 211

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   +A+ +F E+ + GL      Y  L+ G  K G  K    +  +M+  GV P+ +TY
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +++ +   GR + A  +  EM       N   Y+ ++ G     +     +V+ +MKS
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN +ID F     L  A++    + S G+ P  +T+N L+    K G    
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSG 391

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A ++ +EM+ERG  P   TY I+I+     +  E   +L   M   GL P+V TY+ L+ 
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIH 451

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            +           C++G  ++A   F++M    L+P+ +  N+++  + ++     A  +
Sbjct: 452 GF-----------CIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRL 500

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
            + M+E  L P+V +Y  +++ L +  K
Sbjct: 501 FREMEEKELPPNVASYRYMIEVLCKERK 528



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 5/387 (1%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           YS+ ++      A G  EK ++  +  +    +P  + Y  LI  C +  ++EKA +L  
Sbjct: 164 YSFGIVIKGCCEA-GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFF 222

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   +   Y+++I  L + N I     + +Y++++ D +  +    N V+    K
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFK-NGIKKQGFE-MYEKMQEDGVFPNLYTYNCVMNQHCK 280

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A +     +  G+S    TY  +I  L    +  EA  V +++K  G+ P    
Sbjct: 281 DGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLIT 340

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G+  +G L  A  +  +++  G+ P   TY++L+  +   G    A  V+KEME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   Y+ ++  +      ++  Q+   M+  G+ PD H Y+V+I  F     ++
Sbjct: 401 ERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMN 460

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  M+++ +EP+ + +NT++  + K G   RA  LF EM+E+   P   +Y  MI
Sbjct: 461 EASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPN 544
            +L ++ + ++ + L+  M   G+ P+
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDTGIDPS 547



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 190/401 (47%), Gaps = 13/401 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++  +I  C    ++EK+ +L+ ++R+ G+  + + Y+ +I    +  +I+ +  + L+ 
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA--KDLFF 222

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  +      +I G  K G   +        Q  G+ P   TY  V+      G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDG 282

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           RT +A  +F+E++E G+      YN L+ G  +     +A  V+ +M+  G+ P+  TY+
Sbjct: 283 RTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYN 342

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID +   G+   A  + ++++     P+   Y+ +++G+  +G+     +V+KEM+  
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++P    Y ++IDTF + + +  A+     M   G+ PD  T++ LI      G+ + A
Sbjct: 403 GIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEA 462

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF+ M  +   P    YN M+    ++       RL   M  + L PNV +Y  ++++
Sbjct: 463 SRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
             +  +  +A    EGL ++ ++        G+ PS+  LN
Sbjct: 523 LCKERKSKEA----EGLVEKMIDT-------GIDPSDSILN 552



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 165/346 (47%), Gaps = 12/346 (3%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           K+  Y  +I A   S     + + F E+ + G  P +  +N LL   V            
Sbjct: 93  KSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFF 152

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           +E  +  V  D +++ ++I     AG  E +  +L E+      PN  IY+ ++ G   R
Sbjct: 153 NE-SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKR 211

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           GE ++   +  EM   G+  +   Y V+I    K          +++M  +G+ P+  T+
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTY 271

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +++ H K GR   A +LF+EM+ERG      TYN +I  L  + +  +  +++  M++
Sbjct: 272 NCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G+ PN++TY TL+D +           C  G   +A++  R +++ GL PS +  N L+
Sbjct: 332 DGINPNLITYNTLIDGF-----------CGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + F +    + A  V++ M+E G+KP  +TYT L+    R+D   K
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEK 426



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 172/397 (43%), Gaps = 43/397 (10%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
           P  + ++ L + C     I+ A  +   + K  L  + E  Y++LIH L   G  ++ +E
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLV-ANEWTYTVLIHGLFKNGIKKQGFE 254

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +   Q   + P   TYN +++   ++   + A  L  +MR+ G  C+ + Y+ +I  L 
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R                                    KA +A+K M      +  G++P 
Sbjct: 315 RE----------------------------------MKANEANKVMD---QMKSDGINPN 337

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I      G+  +A ++  +LK  GL P    YN L+ G+ K G    A  VV 
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EME  G+ P + TY++LID +A     E A  +   ME     P+   YS ++ G+  +G
Sbjct: 398 EMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +     ++ K M +  +EP+   YN M+  + K    + A+  F  M  + + P+  ++ 
Sbjct: 458 QMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            +I+   K  +   AE L E+M + G  P  +  N++
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL---AGYRDRGEWQRTFQVLK 429
           Y ++I+AY  +   +S+     EM      P S  ++ +L    G     +W R F   K
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                 V+ D + + ++I    +   +  +      +   G  P+ + + TLID   K G
Sbjct: 157 ----IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
             ++A++LF EM + G      TY ++I+ L +    +    +   M+  G+ PN+ TY 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            +++ + + GR  DA +            F  MR  G+  + +  N+LI     + +  E
Sbjct: 273 CVMNQHCKDGRTKDAFK-----------LFDEMRERGVSCNIVTYNTLIGGLCREMKANE 321

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           A  V+  MK +G+ P+++TY TL+     V K  K  S
Sbjct: 322 ANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 179/422 (42%), Gaps = 68/422 (16%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G  K     KA+  L   +G    P + TY  ++  L   GR  EA  +  E+K 
Sbjct: 14  NTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKR 73

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL+     Y+ L+ G+   G L   + +  EM   G+ P+   YS LI+ +   G W  
Sbjct: 74  KGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWRE 133

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  VL  M     +P+ + Y+ ++ G    G  ++   +   M   G EP T  YNV+I+
Sbjct: 134 ATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLIN 193

Query: 449 TFGKYNCLHHAMAAFDRMLSEG-------------------------------------I 471
              K  C+  A   F+ ML +G                                     +
Sbjct: 194 GLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYV 253

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE--------- 522
           EPD IT+NT+I    K GR D+A E+++ M ERG F    T +I+I   GE         
Sbjct: 254 EPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILI---GEYIKSGIIDK 310

Query: 523 -QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
             E W+ V +L       GL+P+  TY+ ++D +           C   + + A   F  
Sbjct: 311 AMELWKRVHKL-------GLVPSSTTYSVMIDGF-----------CKMHMLNFAKGLFSR 352

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           M+  GL P+    N+L+ +  ++    +A  + Q MKE+  +PD +++  ++   ++   
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412

Query: 642 FH 643
            H
Sbjct: 413 IH 414



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 206/467 (44%), Gaps = 17/467 (3%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +R  + P  ++YN +I+   +   LEKA++L+ +M       +   Y +++  L +  ++
Sbjct: 2   KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           + ++  +L  E++   +E+D  + + +I GF   G   +           G+SP    Y+
Sbjct: 62  EEAM--RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYS 119

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            +I      G   EA AV   + E G++P    Y  ++ G  K G  + A  +   M   
Sbjct: 120 CLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  P   TY++LI+     G    A  + + M     +     Y+ ++ G  + G+    
Sbjct: 180 GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEA 239

Query: 425 FQVLKEMKSSG--VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
            ++   +   G  VEPD   +N +I    K   L  A+  +D M+  G   +  T + LI
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILI 299

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
             + K G  D+A EL++ + + G  P +TTY++MI+   +       K L   M+  GL 
Sbjct: 300 GEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLS 359

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P +  Y TL+           A  C E   +QA   F+ M+    +P  ++ N +I+   
Sbjct: 360 PTLFDYNTLM-----------ASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +      A  +L  M++ GL PD  TY++ +  L ++ +  +   ++
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAF 455



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 193/462 (41%), Gaps = 48/462 (10%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAF-LLSQRQR----LTPLTYNALISACARNDDLEKAL 213
           C      Y IL+  L +  ++ EA  LL + +R    +  + Y+ LIS       L++  
Sbjct: 41  CEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTN--KIDSSLLQKLYKEIECDKIELDGQLLNDV 271
            L  +M + G   + + YS +I    +    +  +++L  + +      I+ D      +
Sbjct: 101 ALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTER----GIQPDVYTYTCM 156

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I G  K G A KA+    +    G  P T TY  +I  L   G   +A  +FE + E G 
Sbjct: 157 IGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGK 216

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLPDEHTYSLLIDAYANAGRWESA 389
           +    +YN L+ G    G L +A  + S +   G  V PD  T++ +I      GR + A
Sbjct: 217 RLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKA 276

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M    +  N F    ++  Y   G   +  ++ K +   G+ P +  Y+VMID 
Sbjct: 277 VEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDG 336

Query: 450 FGKYNCLHHAMAAFDRMLSEGI-----------------------------------EPD 474
           F K + L+ A   F RM   G+                                   EPD
Sbjct: 337 FCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD 396

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
           TI++N +ID   K G    A+EL  +MQ+ G  P   TY+  IN L +  + E+ K    
Sbjct: 397 TISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFD 456

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +M A G+ P+   Y +L+  +G +   ++ I  L  ++D  V
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 16/321 (4%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           +K   + P   +YN ++ G  K   L+ A  ++ EME S   P+  TY +L+D     GR
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A  +L EM+    + +  +YS +++G+  +G   R   +  EM   G+ P+   Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+ F K      A A    M   GI+PD  T+  +I    K GR  +A +LF+ M E+G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P T TYN++IN L ++    D  ++   M  +G    VV+Y TL+     +G+ D+A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 566 ECLEGLSDQAVNAFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           +            F  +  DG  ++P  +  N++I    ++ R  +A  +   M E G  
Sbjct: 241 K-----------LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 624 PDVVTYTTLMKALIR---VDK 641
            ++ T   L+   I+   +DK
Sbjct: 290 GNLFTCHILIGEYIKSGIIDK 310



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 203/459 (44%), Gaps = 11/459 (2%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
           V   ++ +L+   CS    +D   A+   + +  +  +  ++YS LI+   +     EA 
Sbjct: 78  VDVVVYSTLISGFCS-KGCLDRGKALFDEMLEKGISPNV-VVYSCLINGFCKKGLWREAT 135

Query: 183 -FLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
             L +  +R + P   TY  +I    ++    KAL+L   M + G     + Y+++I  L
Sbjct: 136 AVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGL 195

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG--MAQGVGL 296
            +   I  +   K+++ +      L+    N +I+G    G   +AM+     +  G  +
Sbjct: 196 CKEGCIGDAF--KIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYV 253

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P   T+  VI  L   GR  +A  +++ + E G        + L+  Y+K G +  A  
Sbjct: 254 EPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAME 313

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +   + + G++P   TYS++ID +        A+ +   M++S   P  F Y+ ++A   
Sbjct: 314 LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLC 373

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
                ++  ++ +EMK S  EPDT  +N+MID   K   +H A    + M   G+ PD  
Sbjct: 374 KESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAY 433

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+++ I+   K G+ + A+  F+ M   G  P    Y+ +I   G  +  E+V  LL  M
Sbjct: 434 TYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
              G++ ++    +++     S      +E L   S ++
Sbjct: 494 ADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSES 532


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 32/462 (6%)

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           +L+ A+ L   M Q       I +S ++ ++ + NK D  L+    +++E   I  +   
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD--LVISFGEKMEILGISHNLYT 115

Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
            N +I  F +    S A+  LG    +G  P   T  +++    +  R  +A A+ +++ 
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
           E G KP T  +  L+ G        +A  ++  M + G  PD  TY  +++     G  +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235

Query: 388 SARIVLKEMEVSHAKPNSFIYSRI---LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
            A  +L +ME +  + N  IYS +   L  YR   +    F    EM++ GV P+   Y+
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT---EMENKGVRPNVITYS 292

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I     Y     A      M+   I P+ +T++ LID   K G+  +AE+L+EEM +R
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              P   TY+ +IN     +R  + K++L  M  +  LPNVVTY TL++ + ++ R D  
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412

Query: 565 IECLEGLS------------------------DQAVNAFRVMRTDGLKPSNLALNSLINA 600
           +E    +S                        D A   F+ M + G+ P+ L  N L++ 
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             ++ + A+A  V +Y++ + ++PD+ TY  +++ + +  K+
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 2/334 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+  LI     ++   +A+ L+ +M Q G   D + Y  V+  L +    D+ L   L 
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG--DTDLALNLL 241

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            ++E  KIE +  + + VI    K      A+      +  G+ P   TY+++I+ L N 
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  +A  +  ++ E  + P    ++AL+  +VK G L  AE +  EM +  + P+  TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           S LI+ +    R   A+ +L+ M      PN   Y+ ++ G+       +  ++ +EM  
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+  +T  Y  +I  F +     +A   F +M+S G+ P+ +T+N L+D   K G+  +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
           A  +FE +Q     P   TYNIMI  + +  +W+
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 14/352 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    ++ +++A++   +     +  E+++  G+      YN L+  + +   L  A  +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + +M + G  PD  T + L++ + +  R   A  ++ +M     KP++  ++ ++ G   
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
             +      ++  M   G +PD   Y  +++   K      A+   ++M +  IE + + 
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           ++T+ID   K    D A  LF EM+ +G  P   TY+ +I+ L    RW D  RLL +M 
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            + + PN+VT++ L+D + + G+   A +  E +  ++++           P+    +SL
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID-----------PNIFTYSSL 364

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
           IN F    R  EA  +L+ M      P+VVTY TL+       RVDK  ++F
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 11/294 (3%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L DA  +   M +S   P    +S L+ A A   +++      ++ME+     N + Y+ 
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++  +           +L +M   G EPD    N +++ F   N +  A+A  D+M+  G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
            +PDT+T+ TLI   F   +   A  L + M +RG  P   TY  ++N L ++   +   
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  M A  +  NVV Y+T++D   +    DDA+           N F  M   G++P+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL-----------NLFTEMENKGVRPN 287

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +  +SLI+      R ++A  +L  M E  + P++VT++ L+ A ++  K  K
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 4/205 (1%)

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +++ P  +T++ALI A  +   L KA  L  +M +     +   YS +I      +++  
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           +  Q L   I  D +  +    N +I GF KA    K M         GL   T TY  +
Sbjct: 377 AK-QMLELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I     +     A+ VF+++   G+ P    YN LL G  K G L  A  V   ++RS +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 367 LPDEHTYSLLIDAYANAGRWESARI 391
            PD +TY+++I+    AG+W+   I
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGI 519


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 216/459 (47%), Gaps = 13/459 (2%)

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQ 250
           LT +TY+ +I+  A+ +D + A NL  + +      + I YS +I +  ++  +D +  +
Sbjct: 337 LTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRA--E 394

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L +E+E D I+      + ++ G+    D  K +      +    +P   +Y  +I   
Sbjct: 395 ELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLY 454

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G+  +A A+ +E++  G+K   K Y+ L+ G++ +    +A  +  EM +SG+ PD 
Sbjct: 455 IKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDR 514

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
             Y+LLI+A+   G  + A  +L++M+    +P++  +  I+ G+   G+ +R   +L  
Sbjct: 515 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDL 574

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           M+ SG  P    YN +I    K N +  A++  ++M   GI P+  T+  ++  +   G 
Sbjct: 575 MRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGD 634

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
             +A E F +++E G       Y  ++    +  R +    +   M  Q +  N   Y  
Sbjct: 635 IGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNI 694

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+D + + G   D  E        A +  + M+ DG+ P+     S INA  +      A
Sbjct: 695 LIDGWARRG---DVWE--------AADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 743

Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             V++ M + GLKP++ TYTTL+K   +     +   S+
Sbjct: 744 QKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSF 782



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 224/491 (45%), Gaps = 28/491 (5%)

Query: 164 LLYSILIHA------LGRSEKLYEAFLLSQRQRLTPL-TYNALISACARNDDLEKALNLM 216
           ++YS +IHA      + R+E+L     + +     P+  Y++++       D +K L + 
Sbjct: 375 IIYSNIIHAHCQSGNMDRAEELVRE--MEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVF 432

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            ++++  +    I+Y  +I    +  K+  ++   + KE+E   I+ + +  + +I GF 
Sbjct: 433 ERLKECCFTPSIISYGCLINLYIKIGKVTKAI--AISKEMESYGIKHNNKTYSMLISGFI 490

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
              D + A          GL P  A Y  +I A    G    A  + E++++  ++P  +
Sbjct: 491 HLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNR 550

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           A+  +++G+   G +K A  ++  M RSG  P   TY+ LI       + E A  VL +M
Sbjct: 551 AFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKM 610

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            ++   PN   Y+ I+ GY   G+  + F+   ++K  G++ D + Y  ++    K   +
Sbjct: 611 SIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRM 670

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+A    M ++ I  +T  +N LID   + G    A +L ++M+E G  P   TY   
Sbjct: 671 QSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSY 730

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           IN   +    +  ++++  M   GL PN+ TYTTL+  + ++            L D+A+
Sbjct: 731 INACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKA-----------SLPDRAL 779

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA------FAVLQYMKENGLKPDVVTYT 630
            +F  M+  GLKP   A + L+ +        E        ++ + M EN L  D+ T  
Sbjct: 780 KSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSICREMFENDLTVDMRTAV 839

Query: 631 TLMKALIRVDK 641
              + L ++++
Sbjct: 840 HWSRWLHKIER 850



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 200/473 (42%), Gaps = 26/473 (5%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           +  +I   A+  D   A      MR  G   +   ++ ++ +      +   L     +E
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVL--SCVEE 329

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           ++ + IEL     + +I GFAK  DA  A      A+          Y+ +I A   SG 
Sbjct: 330 MKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGN 389

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              AE +  E++E G+     AY++++ GY  +   K    V   ++     P   +Y  
Sbjct: 390 MDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGC 449

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+ Y   G+   A  + KEME    K N+  YS +++G+    ++   F + +EM  SG
Sbjct: 450 LINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG 509

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           ++PD   YN++I+ F K   +  A+   ++M  E ++P    +  +I+     G   RA 
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 569

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            + + M+  G  P   TYN +I+ L ++ + E    +L  M   G+ PN  TYT ++  Y
Sbjct: 570 NILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629

Query: 556 GQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKPSN 591
             +G    A E                        C  G    A+   R M T  +  + 
Sbjct: 630 AANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNT 689

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              N LI+ +       EA  +++ MKE+G+ P++ TYT+ + A  +     +
Sbjct: 690 FVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 742



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 11/350 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  +I   +  G    A A FE ++  G++P    + +L+  Y     ++     
Sbjct: 267 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSC 326

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V EM+  G+     TYS++I  +A     +SA  + KE +      N  IYS I+  +  
Sbjct: 327 VEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQ 386

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G   R  ++++EM+  G++     Y+ M+  +         +  F+R+      P  I+
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A  + +EM+  G      TY+++I+       + +   +   M 
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEML 506

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+   Y  L++ + + G  D AI  LE            M+ + ++PSN A   +
Sbjct: 507 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEK-----------MQKERMQPSNRAFRPI 555

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           I  F        A  +L  M+ +G  P V+TY  L+  LI+ ++  +  S
Sbjct: 556 IEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVS 605



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 46/273 (16%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           KP+   +  ++  Y  RG+        + M++ G+EP+   +  ++  +     +   ++
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325

Query: 462 AFDRMLSEGIEPDTIT-----------------------------------WNTLIDCHF 486
             + M +EGIE   +T                                   ++ +I  H 
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  DRAEEL  EM+E G       Y+ M++     +  +    +   ++     P+++
Sbjct: 386 QSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 445

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           +Y  L+++Y + G+   AI     +S +       M + G+K +N   + LI+ F     
Sbjct: 446 SYGCLINLYIKIGKVTKAI----AISKE-------MESYGIKHNNKTYSMLISGFIHLHD 494

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            A AF++ + M ++GL+PD   Y  L++A  ++
Sbjct: 495 FANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKM 527


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 186/421 (44%), Gaps = 51/421 (12%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           + N V+ GF + G   +A R +   +  GL+P   T+ A I+AL  +GR ++A  +F ++
Sbjct: 214 VCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDM 273

Query: 327 KES---GL-KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           +E    GL +P    ++ +L G+ + G + +A  +V  M   G L    +Y+  +     
Sbjct: 274 QEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVR 333

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G    A+ +L+EM     +PNS+ Y+ I+ G    G+     +V   +KS  + PD   
Sbjct: 334 NGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVT 393

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y  ++  +        A    D M  +G  P++ T+N L+   +K GR   AE L E M 
Sbjct: 394 YTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMS 453

Query: 503 ERGYFPCTTTYNIMINLLGEQER-----------WEDVKRLLGNM------------RAQ 539
           E+GY   T + NI+I+ L    +           W +    LG +             ++
Sbjct: 454 EKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSK 513

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQA 575
             LP+ +TY+TLV    + GRFD+A +                        C  G +  A
Sbjct: 514 RCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLA 573

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           V   R M   G KPS    N LI  F E     E   ++  MK  G+ P+V+TY +L+K+
Sbjct: 574 VKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKS 633

Query: 636 L 636
            
Sbjct: 634 F 634



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 245/549 (44%), Gaps = 48/549 (8%)

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQRQR 190
           LL+ LC++   ++LA  V   + + N     E  + IL     R+ +  +A  +L     
Sbjct: 156 LLQALCAA-GRMELARRVFDAMPERN-----EFSFGILARGYCRAGRSMDALGVLDSMPT 209

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--L 248
           +  +  N +++   R   +++A  L+ +MR +G   + + ++  I +L +  ++  +  +
Sbjct: 210 MNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRI 269

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
              + ++ E      D    + ++ GF +AG   +A   + + +  G   +  +Y   ++
Sbjct: 270 FNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLS 329

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL- 367
            L  +G   EA+ +  E+   G++P +  YN ++ G  K G   D    V +  +SGV+ 
Sbjct: 330 GLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR-KVEDFVKSGVMT 388

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD  TY+ L+ AY + G   +A  +L EM      PNSF Y+ +L      G      ++
Sbjct: 389 PDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERL 448

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG----------------- 470
           L+ M   G   DT   N++ID   + N L  AM   D M +EG                 
Sbjct: 449 LERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTD 508

Query: 471 ------IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                   PD IT++TL+    K GR+D A++   EM  +   P +  Y+  I+   +  
Sbjct: 509 SSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHG 568

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           +     ++L +M  +G  P+  TY  L  I+G   + +         SD+ +     M+ 
Sbjct: 569 KTSLAVKVLRDMEKKGCKPSTRTYNLL--IWGFREKHN---------SDEILKLISEMKG 617

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF-- 642
            G+ P+ +  NSLI +F E     +A  +L  M +N + P++ ++  L+KA  +   F  
Sbjct: 618 KGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSA 677

Query: 643 -HKVFSSYL 650
             +VF + L
Sbjct: 678 AQRVFDASL 686



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/484 (22%), Positives = 210/484 (43%), Gaps = 37/484 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQK---HNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           +++ +  LC +   +D AY + + +Q+     L    ++ + +++     +  + EA +L
Sbjct: 250 FNARISALCKAGRVLD-AYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVL 308

Query: 186 SQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
               R         +YN  +S   RN  + +A  L+ +M  +G   +   Y++++  L +
Sbjct: 309 VDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCK 368

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             K     ++K+   ++   +  D      ++  +   G+A+ A R L      G +P +
Sbjct: 369 EGKAFD--VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNS 426

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY  ++ +L  +GR  EAE + E + E G    T + N ++ G  +   L  A  +V  
Sbjct: 427 FTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDG 486

Query: 361 MERSG-----------------------VLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           M   G                        LPD  TYS L+ A    GR++ A+  L EM 
Sbjct: 487 MWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMI 546

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+S +Y   + GY   G+     +VL++M+  G +P T  YN++I  F + +   
Sbjct: 547 GKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSD 606

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
             +     M  +GI P+ +T+N+LI    + G  ++A  L +EM +    P  T++ ++I
Sbjct: 607 EILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLI 666

Query: 518 NLLGEQERWEDVKRLL-GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
               +   +   +R+   ++   G     V Y+ +       GR+ +A+  LE + +  +
Sbjct: 667 KAFCKTSDFSAAQRVFDASLSTCG--QKEVLYSLMCTQLSTYGRWLEAMNILETVLELRI 724

Query: 577 NAFR 580
           +  R
Sbjct: 725 SIHR 728



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 23/302 (7%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN LL   ++       E +  ++  SG  PD  T ++L+ A   AGR E AR V   M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM- 176

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               + N F +  +  GY   G       VL  M +  +       N ++  F +   + 
Sbjct: 177 ---PERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLV----VCNTVVAGFCREGQVD 229

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ---ERGY-FPCTTTY 513
            A    +RM  EG+ P+ +T+N  I    K GR   A  +F +MQ   ERG   P   T+
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTF 289

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
           ++M++   E    ++ + L+  MR  G L  V +Y   +    ++G   +A E L     
Sbjct: 290 DVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELL----- 344

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
                 R M  +G++P++   N +++   ++ +  +   V  ++K   + PDVVTYT+L+
Sbjct: 345 ------REMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLL 398

Query: 634 KA 635
            A
Sbjct: 399 HA 400



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/406 (21%), Positives = 170/406 (41%), Gaps = 39/406 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SLL   CS  ++      +    QK   C      Y++L+ +L ++ ++ EA  L +R
Sbjct: 394 YTSLLHAYCSEGNAAAANRILDEMAQKG--CAPNSFTYNVLLQSLWKAGRITEAERLLER 451

Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDG-------------------- 223
                  L   + N +I    RN+ L+ A++++  M  +G                    
Sbjct: 452 MSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSS 511

Query: 224 -YHC--DFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
              C  D I YS ++ +L +  + D +   LL+ + K+I  D +     L +  I G+ K
Sbjct: 512 SKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSV-----LYDTFIHGYCK 566

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S A++ L   +  G  P T TY  +I        + E   +  E+K  G+ P    
Sbjct: 567 HGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMT 626

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN+L+K + + G +  A  ++ EM ++ ++P+  ++ LLI A+     + +A+ V  +  
Sbjct: 627 YNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF-DAS 685

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
           +S       +YS +       G W     +L+ +    +      Y  +I+   K + + 
Sbjct: 686 LSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVD 745

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           H       ++ +G   D   +  +ID   + G+    + L ++M E
Sbjct: 746 HGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMME 791


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 222/507 (43%), Gaps = 44/507 (8%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKM 219
           LY+ LI AL R   +    L+    R   + P   TYN L+ A  +N  +  A  ++ +M
Sbjct: 136 LYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEM 195

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID----------------SSLLQKLYKEIECDKI-- 261
              G   D + Y  ++ +L    ++D                ++++  L +E    ++  
Sbjct: 196 ATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFA 255

Query: 262 ---ELDGQLL-------NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
              ++ G+ L         ++  F KAG+   A   L      G +P  AT+ A++  L 
Sbjct: 256 VVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLF 315

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           N GR  +A  +++ +   G  P T +YN L++G   +G LK A  V+++ME+ G  P+  
Sbjct: 316 NDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNAR 375

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TYS LID ++ AG  + A  +  +M  S  KPN  +Y+ ++  +  +  + +   ++ +M
Sbjct: 376 TYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKM 435

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
                 P+T  +N +I +      +  A+  F  M   G  P+  T+N L+   F+ G  
Sbjct: 436 LVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNC 495

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A ++  EMQ  G      TYN +++ L +     +    +G M  +G+ P+  T+T +
Sbjct: 496 GDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAI 555

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +  Y + G    A   L  ++   VN  R +         L    L+       +  +A 
Sbjct: 556 IHAYCKEGEVRMAAWILGAMN--VVNCGRNI---------LVYTILMAELCNQDKLEDAM 604

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR 638
             L  M   G+ P+ VT+  L++ + R
Sbjct: 605 VYLLKMLYEGIYPNTVTWNVLVRGVFR 631



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 211/499 (42%), Gaps = 54/499 (10%)

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           P  YN LI A  R + +     +   MR+DG   +   Y+L++++L + +++ ++  +K+
Sbjct: 134 PRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAA--RKM 191

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E+       D      ++      G   +A   L  A      P  A+Y AVI AL  
Sbjct: 192 LDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCR 246

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             R  E  AV  ++   GL+P    Y  ++  + K G L+ A  +++ M  +G  P+  T
Sbjct: 247 EFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVAT 306

Query: 373 YSLLIDAYANAGR-------W----------------------------ESARIVLKEME 397
           ++ L+    N GR       W                            + A  VL +ME
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN+  YS ++ G+   G+      +  +M  SG +P+   Y  M+  F K    +
Sbjct: 367 QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFN 426

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A +  D+ML E   P+T+T+NTLI     C R  RA  +F EM+  G  P   TYN ++
Sbjct: 427 QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELL 486

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           + L  +    D  +++  M+  G+  ++VTY T+V     SG       C   +  +A+ 
Sbjct: 487 HGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVV-----SGL------CQMRMGREAMF 535

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
               M   G++P      ++I+A+ ++     A  +L  M       +++ YT LM  L 
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELC 595

Query: 638 RVDKFHKVFSSYLFFNIYK 656
             DK       YL   +Y+
Sbjct: 596 NQDKLEDAM-VYLLKMLYE 613



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 168/391 (42%), Gaps = 32/391 (8%)

Query: 275 FAKAGDASKAMR-FLGMAQGVGLSPKTAT--YAAVITALSNSGRTIEAEAVFEELKESGL 331
           FA+AG   +A++ F      +G +  TA   Y  +I AL           V   +++ G+
Sbjct: 106 FARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGV 165

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           +P    YN L++   +   +  A  ++ EM   G  PD+ TY  ++ A    GR + A  
Sbjct: 166 QPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATE 225

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           VL     S A P +  Y+ ++         Q  F V+ +M   G++P+   Y  +++ F 
Sbjct: 226 VL-----SAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFC 280

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K   L  A A   RM+  G  P+  T+  L+   F  GR   A ++++ M   G+ P T 
Sbjct: 281 KAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTV 340

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE----- 566
           +YN++I  L      +    +L +M   G  PN  TY+TL+D + ++G  D AI      
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDM 400

Query: 567 -------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
                              C + + +QA +    M  +   P+ +  N+LI +    +R 
Sbjct: 401 TRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRV 460

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             A  V   M+ +G  P+  TY  L+  L R
Sbjct: 461 GRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 44/359 (12%)

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           +A+ A ++     G +   +  + EM   GV   E      + A+A AG  + A   LK 
Sbjct: 62  RAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRA---LKT 118

Query: 396 M-----EVSHAKPNS-FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
                 ++  A+P +  +Y+ ++              V   M+  GV+P+   YN+++  
Sbjct: 119 FYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRA 178

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             + + +  A    D M ++G  PD +T+ T++      GR D A E+          P 
Sbjct: 179 LCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PV 233

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL- 568
             +YN +I  L  + R ++V  ++G+M  +GL PNV+TYTT+V+ + ++G    A   L 
Sbjct: 234 AASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILA 293

Query: 569 -----------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
                                  +G    A++ ++ M  +G  PS ++ N LI       
Sbjct: 294 RMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVG 353

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSGEK 664
               A +VL  M+++G  P+  TY+TL      +D F K        +I+  ++ SG K
Sbjct: 354 DLKGASSVLNDMEQHGCFPNARTYSTL------IDGFSKAGDLDGAISIWNDMTRSGCK 406


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 231/513 (45%), Gaps = 23/513 (4%)

Query: 145 LAYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNA 198
            A+ V++ + K    ++ Y   ++IL+  L R+ +  +A  L    +R  L P   +YN 
Sbjct: 125 FAFGVLALMLKRGFAFNVYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNT 182

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I       +LEKAL L ++M+  G     + + ++I +  +  K+D ++     KE++ 
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM--GFLKEMKF 240

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
             +E D  +   +I GF   G+  +           G SP   TY  +I      G+  E
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A  +FE + E G++P    Y  L+ G   +G  K+A   ++ M      P+  TY+++I+
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIIN 360

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGV 436
                G    A  +++ M+    +P++  Y+ +L G   +G+     ++L  M   SS  
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           +PD   YN +I    K N LH A+  +D ++ +    D +T N L++   K G  ++A E
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           L++++ +      + TY  MI+   +       K LL  MR   L P+V  Y  L+    
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL- 539

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
                     C EG  DQA   F  M+ D   P  ++ N +I+   +      A ++L  
Sbjct: 540 ----------CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           M   GL PD+ TY+ L+   +++    +  S +
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 20/369 (5%)

Query: 285 MRFLGMAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           MR  G A GV       G +     +  ++  L  +    +A ++  E++ + L P   +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN +++G+ +   L+ A  + +EM+ SG      T+ +LIDA+  AG+ + A   LKEM+
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               + +  +Y+ ++ G+ D GE  R   +  E+   G  P    YN +I  F K   L 
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F+ M+  G+ P+  T+  LID     G+   A +    M E+   P   TYNI+I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIII 359

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L +     D   ++  M+ +   P+ +TY  L+              C +G  D+A  
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL-----------CAKGDLDEASK 408

Query: 578 AFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              +M  D     P  ++ N+LI+   ++ R  +A  +   + E     D VT   L+ +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468

Query: 636 LIRVDKFHK 644
            ++    +K
Sbjct: 469 TLKAGDVNK 477



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 16/302 (5%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I+ L +   + +A      +  +R R   +TYN L+       DL++A  L+  M 
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414

Query: 221 QDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA-K 277
           +D  + D   I+Y+ +I  L + N++  +L   +Y ++  +K+    ++  ++++    K
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQAL--DIY-DLLVEKLGAGDRVTTNILLNSTLK 471

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AGD +KAM          +   + TY A+I     +G    A+ +  +++ S L+P    
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN LL    K G L  A  +  EM+R    PD  +++++ID    AG  +SA  +L  M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
            +   P+ F YS+++  +   G          +M  SG EPD H    + D+  KY C+ 
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKY-CIS 646

Query: 458 HA 459
             
Sbjct: 647 QG 648



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 158/352 (44%), Gaps = 13/352 (3%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    +  +L EA     F++ +  R    TY  LI         ++AL  ++ M 
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344

Query: 221 QDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           +     + + Y+++I  L +   + D+  + +L K+    +   D    N ++ G    G
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK---RRTRPDNITYNILLGGLCAKG 401

Query: 280 DASKAMR--FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES-GLKPRTK 336
           D  +A +  +L +       P   +Y A+I  L    R  +A  +++ L E  G   R  
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
             N LL   +K G +  A  +  ++  S ++ +  TY+ +ID +   G    A+ +L +M
Sbjct: 462 T-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            VS  +P+ F Y+ +L+     G   + +++ +EM+     PD   +N+MID   K   +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
             A +    M   G+ PD  T++ LI+   K G  D A   F++M + G+ P
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 5/406 (1%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           L R + L++  +L +      +TYN LI    +   L++A  +   M + G   +   Y+
Sbjct: 263 LDRGKALFDE-VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I  L    K   +L Q L   IE D+ E +    N +I    K G  + A+  + + +
Sbjct: 322 GLIDGLCGVGKTKEAL-QPLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMK 379

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESG-LKPRTKAYNALLKGYVKMGY 350
                P   TY  ++  L   G   EA + ++  LK+S    P   +YNAL+ G  K   
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L  A  +   +       D  T ++L+++   AG    A  + K++  S    NS  Y+ 
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+   G       +L +M+ S ++P    YN ++ +  K   L  A   F+ M  + 
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
             PD +++N +ID   K G    AE L   M   G  P   TY+ +IN   +    ++  
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
                M   G  P+     +++      G  D   E ++ L D+ +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 11/330 (3%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
           A  ++ ++  LC      D A  +V  ++K        + Y+IL+  L     L EA   
Sbjct: 352 AVTYNIIINKLCKDGLVAD-AVEIVELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKL 409

Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
              +L       P  ++YNALI    + + L +AL++   + +     D +  ++++ S 
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +   ++ ++  +L+K+I   KI  +      +I GF K G  + A   L   +   L P
Sbjct: 470 LKAGDVNKAM--ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
               Y  ++++L   G   +A  +FEE++     P   ++N ++ G +K G +K AE ++
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
             M R+G+ PD  TYS LI+ +   G  + A     +M  S  +P++ I   +L     +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           GE  +  +++K++    +  D      ++D
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMD 677



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 27/214 (12%)

Query: 459 AMAAFDRMLSEGIEPDTITWNTLID--C-HFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           A      ML  G   +    N L+   C + +CG+   A  L  EM+     P   +YN 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNT 182

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I    E +  E    L   M+  G   ++VT+  L+D + ++G+ D           +A
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD-----------EA 231

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +   + M+  GL+   +   SLI  F +        A+   + E G  P  +TY TL++ 
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 636 LIRVDKFHKVFSSYLFF-------NIYKMLSYSG 662
             ++ +  +    + F        N+Y   +Y+G
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVY---TYTG 322


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 180/368 (48%), Gaps = 24/368 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  V+  L   G T +A  +   +++   KP T  Y+ ++  + K G L  A  +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++EM++  + PD  TYS LIDA     +WE+ R +  EM   +  PN   ++ ++ G   
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+ +   ++++ M   GV+PD   YN++ID +G    +  A   FD M+++ IEP+ I+
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIIS 355

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LI+ + +  + D A ++  E+ ++G  P   T N++++ L E  R +  +     M 
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
           + G +P++ T+ TL+  Y ++G  ++A+                         C  G  D
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A   F  +   GL P  +   ++I+ + ++    EA  +L+ M++NG   D  TY  ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535

Query: 634 KALIRVDK 641
           +  +R +K
Sbjct: 536 RGFLRSNK 543



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 212/453 (46%), Gaps = 17/453 (3%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           + FK    +  V   ++++LL+ L + N   D A  +   L + N+C   E++Y  +++ 
Sbjct: 132 IHFKKGIPFNQV---IFNTLLRGLFAENKVKD-AVHLFKKLVRENICEPNEVMYGTVMNG 187

Query: 173 L---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L   G ++K ++   L ++    P T  Y+ +I A  ++  L+ A +L+++M+Q     D
Sbjct: 188 LCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPD 247

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---DASKA 284
              YS +I +L + ++ ++  ++ L+ E+    I  +    N VI G  K G   DA + 
Sbjct: 248 IFTYSTLIDALCKLSQWEN--VRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEI 305

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           MR++ + +GV   P   TY  +I      G+   A  +F+ +    ++P   +YN L+ G
Sbjct: 306 MRYM-IEKGV--DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILING 362

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           Y +   + +A  V  E+ + G+ P   T ++L+      GR +SA+    EM  +   P+
Sbjct: 363 YARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
            + +  +L GY   G  +       +++    + +   Y  +ID   K   L  A A F+
Sbjct: 423 LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFE 482

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           ++   G+ PD IT+  +I  + + G  D A+++  +M++ G      TYN+++       
Sbjct: 483 KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           +  ++K  L  +  +       T   L+DI  +
Sbjct: 543 KVSEMKAFLEEIAGKSFSFEAATVELLMDIIAE 575



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/475 (21%), Positives = 197/475 (41%), Gaps = 51/475 (10%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEI 256
           ++++C      +   ++++   + G   + + ++ +++ L   NK+  +  L +KL +E 
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
            C+  E+   +   V+ G  K G   KA   L + +     P T  Y+ VI A    G  
Sbjct: 173 ICEPNEV---MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGML 229

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
             A ++  E+K+  + P    Y+ L+    K+   ++   +  EM    + P+  T++ +
Sbjct: 230 DGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSV 289

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           ID     G+ E A  +++ M      P+   Y+ I+ GY  RG+  R  ++   M +  +
Sbjct: 290 IDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSI 349

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
           EP+   YN++I+ + +   +  AM     +  +G++P  +T N L+   F+ GR   A+ 
Sbjct: 350 EPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQN 409

Query: 497 LFEEMQERGYFP-----CT------------------------------TTYNIMINLLG 521
            F+EM   G+ P     CT                                Y  +I+ L 
Sbjct: 410 FFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC 469

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +  + +        +   GL P+V+TYT ++  Y           C EGL D+A +  R 
Sbjct: 470 KNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY-----------CQEGLLDEAKDMLRK 518

Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           M  +G    N   N ++  F    + +E  A L+ +       +  T   LM  +
Sbjct: 519 MEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDII 573



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/391 (20%), Positives = 159/391 (40%), Gaps = 43/391 (10%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            +L E     P    +S++ +    +  +D A ++++ +++ ++       YS LI AL 
Sbjct: 201 LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI-FTYSTLIDALC 259

Query: 175 RS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +    E +   FL      + P   T+N++I    +   +E A  +M  M + G   D I
Sbjct: 260 KLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVI 319

Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
            Y+++I       ++D +  ++++  +    IE +    N +I G+A+     +AM+   
Sbjct: 320 TYNMIIDGYGLRGQVDRA--REIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCR 377

Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
                GL P   T   ++  L   GRT  A+  F+E+  +G  P    +  LL GY K G
Sbjct: 378 EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNG 437

Query: 350 YLKDAEFVVSEMERS-----------------------------------GVLPDEHTYS 374
            +++A     ++ER                                    G+ PD  TY+
Sbjct: 438 LVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYT 497

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I  Y   G  + A+ +L++ME +    ++  Y+ I+ G+    +       L+E+   
Sbjct: 498 AMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGK 557

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
               +     +++D   +   L + +  F R
Sbjct: 558 SFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 28/236 (11%)

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + F    CL  A + F +M+     P  ++++ L+        Y     LF E+ +    
Sbjct: 45  NEFENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIP 104

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
                 +I++N      R +    +L     +G+  N V + TL+       +  DA+  
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHL 164

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C +G + +A +  R+M     KP+    + +I+AF 
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFC 224

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV---FSSYLFFNIY 655
           +D     A ++L  MK+  + PD+ TY+TL+ AL ++ ++  V   F   +  NIY
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 206/476 (43%), Gaps = 29/476 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  LI    +  D   A     KMR  G       Y+ +I++      +  ++     +E
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAV--SCVEE 183

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +E + I  +    + +I G+  +G+   A ++   +     +   A Y+++I A   +G 
Sbjct: 184 MEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGN 243

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER---SGVLPDEHT 372
              AEA+  +++E GL+     YN L+ GY +         V  +++    +G+ P   T
Sbjct: 244 MERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVT 303

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y  LI+ Y   G+   A    KEM+      N   YS ++ GY   G++   F V ++M 
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMS 363

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            +G+EPD   YN+++  F K   +  A+    RM + G  P   T+ T+ID   K G   
Sbjct: 364 EAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVR 423

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A +   EM+  G  P  TTYN++++ L +  + +    ++  M   G+ PN  +YTTL+
Sbjct: 424 MAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLM 483

Query: 553 DIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLK 588
             +   G    A +CL+                        G    A+     M   G+ 
Sbjct: 484 QGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVP 543

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            +N   N+L++ + +     EA+ ++Q M++ G  PD+ +YT+ + A  +     K
Sbjct: 544 MNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQK 599



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 210/473 (44%), Gaps = 22/473 (4%)

Query: 96  NSESASALASSPSSLNRVEFKLAESYRAVP------APLWHSLLKNLCSSNSSIDLAYAV 149
           N+ + SA+ S   S   VE       R+V         ++ S++   C +  +++ A A+
Sbjct: 192 NAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKA-GNMERAEAL 250

Query: 150 VSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL----------TPLTYNAL 199
           V+ +++  L  +  L Y+IL+    R     EA  L+   +L          T +TY  L
Sbjct: 251 VADMEEQGLEATLGL-YNILMDGYARCH--IEAQCLNVFHKLKARIDTGLSPTAVTYGCL 307

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I+   +   + KAL    +M+  G   +   YS+++    +     ++    +++++   
Sbjct: 308 INLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAF--SVFEDMSEA 365

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
            IE D    N ++  F K+   ++A++ LG  +  G SP   TY  +I     +G    A
Sbjct: 366 GIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMA 425

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
                E+K +G +P    YN ++   V++G +  A  V+ EME +GV P+  +Y+ L+  
Sbjct: 426 YKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQG 485

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           +A+ G    A   LK +     KP    Y+ +L      G  Q    V +EM  +GV  +
Sbjct: 486 FASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMN 545

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            + +N ++D + +   +  A     +M  EG  PD  ++ + ++   K G   +A E  E
Sbjct: 546 NYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIE 605

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           EM+++   P   TY I+I+        E        M+A GL+P+   Y  +V
Sbjct: 606 EMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIV 658



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 62/407 (15%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           YA +I      G    A   FE+++ +G+     AYN L++ Y+    L+ A   V EME
Sbjct: 126 YALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEME 185

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G+ P+  T+S +I  Y ++G  E+A    +     +   N  IYS I+  Y   G  +
Sbjct: 186 IEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNME 245

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGK----------------------------YN 454
           R   ++ +M+  G+E     YN+++D + +                            Y 
Sbjct: 246 RAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYG 305

Query: 455 CLHHAMAAFDRML----------SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           CL +      +M+          ++GI  +  T++ L+D + + G +  A  +FE+M E 
Sbjct: 306 CLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEA 365

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P   TYNI++    +  +     +LLG M+ +G  P + TY T++D + ++G    A
Sbjct: 366 GIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMA 425

Query: 565 IECLE------------------------GLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            + +                         G  D+A +    M   G++P+  +  +L+  
Sbjct: 426 YKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQG 485

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           F        AF  L+ + E   KP +++Y +L+KA  +  +     +
Sbjct: 486 FASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIA 532



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/515 (22%), Positives = 219/515 (42%), Gaps = 39/515 (7%)

Query: 148 AVVSWLQK-------HNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLT 195
           A   W Q+       HN+      +YS +IHA  ++  +  A  L      Q    T   
Sbjct: 211 AAEKWFQRSVSENWNHNVA-----IYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGL 265

Query: 196 YNALISACARNDDLEKALNLMSKMR---QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
           YN L+   AR     + LN+  K++     G     + Y  +I   T+  K+  +L  + 
Sbjct: 266 YNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKAL--EF 323

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            KE++   I L+    + ++ G+ + GD + A          G+ P   TY  ++ A   
Sbjct: 324 CKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCK 383

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           S +   A  +   +K  G  P  + Y  ++ G++K G ++ A   VSEM+ +G  P+  T
Sbjct: 384 SRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATT 443

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y++++      G+ + A  V+ EME++  +PN   Y+ ++ G+   GE    F+ LK + 
Sbjct: 444 YNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVN 503

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
               +P    Y  ++    K   + +A+A  + M   G+  +   +NTL+D   + G   
Sbjct: 504 EITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMW 563

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            A  + ++M++ G+ P   +Y   +N   +    +     +  M+ Q L PN+ TYT L+
Sbjct: 564 EAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILI 623

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF---GEDQRDAE 609
             +      + A+ C           +  M+  GL P       ++ +        R+  
Sbjct: 624 HGWTSVSHPEKALIC-----------YDEMKAAGLIPDKPLYYCIVTSLLSKAAIARETV 672

Query: 610 AFAVLQY---MKENGLKPDVVTYTTLMKALIRVDK 641
              VLQ    M + G+  D+ T     ++L+ V++
Sbjct: 673 RNGVLQVTSEMVDQGMCIDLATAKQWQRSLMNVER 707



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 16/273 (5%)

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           E  Y+LLI  Y   G    AR+  ++M  +    +   Y+ ++  Y      Q     ++
Sbjct: 123 ERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVE 182

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM+  G+ P+   ++ +I  +G    +  A   F R +SE    +   ++++I  + K G
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAG 242

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ---GLLPNVV 546
             +RAE L  +M+E+G       YNI+++             +   ++A+   GL P  V
Sbjct: 243 NMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAV 302

Query: 547 TYTTLVDIYGQSGRFDDAIE-CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           TY  L+++Y + G+   A+E C E            M+  G+  +    + L++ + +  
Sbjct: 303 TYGCLINLYTKLGKMMKALEFCKE------------MKAQGITLNRNTYSMLVDGYVQLG 350

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             A AF+V + M E G++PD VTY  L+KA  +
Sbjct: 351 DFANAFSVFEDMSEAGIEPDWVTYNILLKAFCK 383


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 11/332 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P   TY  +I  L   G T+ A  +F+++ E+G +P    Y+ ++    K   + +A
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S M+  G+ P+  TY+ LI    N  RW  A  +L EM   +  PN   +S ++  
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +   G       VLK M   GVEP+   Y+ +++ +     +  A   FD M+++G +PD
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             ++N LI+ + K  R   A++LF EM  +G  P   +YN +I+ L +  R  +   L  
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           NM   G LP++ TY+ L+D +           C +G   +A   FR M++  LKP+ +  
Sbjct: 245 NMLTNGNLPDLCTYSILLDGF-----------CKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
           N LI+A  + +   EA  +   +   GL+P++
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 144/294 (48%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G  K G+   A          G  P   TY+ +I +L    R  EA  +F  +K  G
Sbjct: 16  IINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    YN+L++G       ++A  +++EM    ++P+  T+SLLI+ +   G    AR
Sbjct: 76  ISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEAR 135

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            VLK M     +PN   YS ++ GY  + E     ++   M + G +PD   YN++I+ +
Sbjct: 136 GVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGY 195

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   +  A   F+ M+ +G+ PD +++NTLID   + GR   A +LF+ M   G  P  
Sbjct: 196 CKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 255

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            TY+I+++   +Q       RL   M++  L PN+V Y  L+D   +S    +A
Sbjct: 256 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 309



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 14/321 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G +P    Y  ++ G  K+G    A  +  +M  +G  PD  TYS +ID+     R   A
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +   M+     PN F Y+ ++ G  +   W+    +L EM S  + P+   ++++I+ 
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           F K   +  A      M   G+EP+ +T+++L++ +        A +LF+ M  +G  P 
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +YNI+IN   + +R  + K+L   M  QGL P++V+Y TL+D   Q GR  +A +   
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD--- 241

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    F+ M T+G  P     + L++ F +    A+AF + + M+   LKP++V Y
Sbjct: 242 --------LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 630 TTLMKALIR---VDKFHKVFS 647
             L+ A+ +   + +  K+FS
Sbjct: 294 NILIDAMCKSRNLKEARKLFS 314



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 148/351 (42%), Gaps = 37/351 (10%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY  +I+   +  +   A  L  KM + G   D + YS +I SL +  +++ +L      
Sbjct: 12  TYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL------ 65

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
                            I  + KA                G+SP   TY ++I  L N  
Sbjct: 66  ----------------DIFSYMKAK---------------GISPNIFTYNSLIQGLCNFS 94

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA A+  E+    + P    ++ L+  + K G + +A  V+  M   GV P+  TYS
Sbjct: 95  RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 154

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            L++ Y+       AR +   M     KP+ F Y+ ++ GY          Q+  EM   
Sbjct: 155 SLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 214

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   YN +ID   +   L  A   F  ML+ G  PD  T++ L+D   K G   +A
Sbjct: 215 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 274

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
             LF  MQ     P    YNI+I+ + +    ++ ++L   +  QGL PN+
Sbjct: 275 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 138/285 (48%), Gaps = 2/285 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY+ +I +  ++  + +AL++ S M+  G   +   Y+ +IQ L   ++   +    + 
Sbjct: 46  VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA--SAML 103

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E+    I  +    + +I  F K G+  +A   L     +G+ P   TY++++   S  
Sbjct: 104 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 163

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
               EA  +F+ +   G KP   +YN L+ GY K   + +A+ + +EM   G+ PD  +Y
Sbjct: 164 AEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 223

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LID     GR   A  + K M  +   P+   YS +L G+  +G   + F++ + M+S
Sbjct: 224 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           + ++P+   YN++ID   K   L  A   F  +  +G++P+   W
Sbjct: 284 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 9/253 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FLL 185
           ++SL++ LC+  S    A A+++ +   N+  +  + +S+LI+   +   ++EA      
Sbjct: 83  YNSLIQGLCNF-SRWREASAMLNEMMSLNIMPNI-VTFSLLINIFCKEGNVFEARGVLKT 140

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                + P  +TY++L++  +   ++ +A  L   M   G   D  +Y+++I    +  +
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           I  +  ++L+ E+    +  D    N +I G  + G   +A          G  P   TY
Sbjct: 201 IGEA--KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 258

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + ++      G   +A  +F  ++ + LKP    YN L+    K   LK+A  + SE+  
Sbjct: 259 SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV 318

Query: 364 SGVLPDEHTYSLL 376
            G+ P+   + L 
Sbjct: 319 QGLQPNMKHWKLF 331


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 24/368 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    Y  V+  L   G T +A  +   +++   KP T  YN ++  + K G L  A  +
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSL 235

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++EM++  + PD  TY+ LID      +WE  R +  EM   +  P+   ++ ++ G   
Sbjct: 236 LNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCK 295

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+ +   +++  M   GVEP+   YNV++D +     +  A   FD M+ +GIEPD I+
Sbjct: 296 EGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIIS 355

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + +  + D+A +LF E+ + G  P   T ++++  L E  R E  K     M+
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQ 415

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
           A G +PN+ T+ TL+  Y ++G  ++A+                         C  G  D
Sbjct: 416 AAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD 475

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +A   F  +   GL P  +   ++I+ + ++    EA  +L+ M++NG  PD  TY  ++
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIV 535

Query: 634 KALIRVDK 641
           +   R  K
Sbjct: 536 RGFFRSSK 543



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 206/450 (45%), Gaps = 11/450 (2%)

Query: 113 VEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHA 172
           + FK    Y  V    + +L++ L + N   D A  +   L + N+C   E++Y  ++  
Sbjct: 132 IHFKKGIPYNEVT---FTTLIRGLFAENKVKD-AVHLFKKLVRENICEPDEVMYGTVMDG 187

Query: 173 L---GRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           L   G ++K ++   L ++    P T  YN +I A  ++  L+ A +L+++M+Q     D
Sbjct: 188 LCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPD 247

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            I Y+ +I  L + ++ +   ++ L+ E+    I  D    N VI G  K G    A   
Sbjct: 248 IITYTSLIDGLGKLSQWEK--VRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEI 305

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
           +      G+ P   TY  V+      G+   A  +F+ + + G++P   +Y AL+ GYV+
Sbjct: 306 MTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVE 365

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
              +  A  +  E+ ++G+ P   T S+L+      GR E A+I   EM+ +   PN + 
Sbjct: 366 KKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYT 425

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           +  +L GY   G  +       +++    + +   Y  +I+   K   L  A A F+++ 
Sbjct: 426 HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLP 485

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+ PD IT+  +I  + + G  D A+++  +M++ G  P   TYN+++       +  
Sbjct: 486 LIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVS 545

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++K  L  +  +       T   L+DI  +
Sbjct: 546 EMKAFLKEIAGKSFSFEAATVELLMDIIAE 575



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 198/475 (41%), Gaps = 53/475 (11%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYK 254
           + ++++C      +   ++++   + G   + + ++ +I+ L   NK+  +  L +KL +
Sbjct: 111 STVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNS 313
           E  C   E D  +   V+ G  K G   KA   L  M QG+   P T  Y  VI A    
Sbjct: 171 ENIC---EPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGI-TKPDTCIYNIVIDAFCKD 226

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A ++  E+K+  + P    Y +L+ G  K+   +    +  EM    + PD  T+
Sbjct: 227 GMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTF 286

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +ID     G+ E A  ++  M     +PN   Y+ ++ GY  RG+  R  ++   M  
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMID 346

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+EPD   Y  +I+ + +   +  AM  F  +   G++P  +T + L+   F+ GR + 
Sbjct: 347 KGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTEC 406

Query: 494 AEELFEEMQERGYFP-----CT------------------------------TTYNIMIN 518
           A+  F+EMQ  G+ P     CT                                Y  +IN
Sbjct: 407 AKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIN 466

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  + +        +   GL P+V+TYT ++  Y           C EGL D+A + 
Sbjct: 467 GLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY-----------CQEGLLDEAKDM 515

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
            R M  +G  P N   N ++  F    + +E  A L+ +       +  T   LM
Sbjct: 516 LRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLM 570



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 151/331 (45%), Gaps = 18/331 (5%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A ++F ++  +   P   +++ LLK  V M +      +  E+ +  +  D    S ++
Sbjct: 55  DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVV 114

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV- 436
           ++     R +    VL          N   ++ ++ G     + +    + K++    + 
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFD--RMLSEGI-EPDTITWNTLIDCHFKCGRYDR 493
           EPD   Y  ++D   K     H   AFD  R++ +GI +PDT  +N +ID   K G  D 
Sbjct: 175 EPDEVMYGTVMDGLCKKG---HTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDG 231

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L  EM+++   P   TY  +I+ LG+  +WE V+ L   M    + P+V T+ +++D
Sbjct: 232 ATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVID 291

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              + G+ +DA E +  + ++           G++P+ +  N +++ +    +   A  +
Sbjct: 292 GLCKEGKVEDAEEIMTYMIEK-----------GVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              M + G++PD+++YT L+   +   K  K
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDK 371



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/397 (21%), Positives = 162/397 (40%), Gaps = 55/397 (13%)

Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
            +L E     P    ++++ +    +  +D A ++++ +++ N+     + Y+ LI  LG
Sbjct: 201 LRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDI-ITYTSLIDGLG 259

Query: 175 RS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
           +    EK+   FL      + P   T+N++I    +   +E A  +M+ M + G   + I
Sbjct: 260 KLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEI 319

Query: 230 NYSLVIQS------LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
            Y++V+        + R  +I  S++ K         IE D      +I G+ +     K
Sbjct: 320 TYNVVMDGYCLRGQMGRARRIFDSMIDK--------GIEPDIISYTALINGYVEKKKMDK 371

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           AM+        GL P   T + ++  L   GRT  A+  F+E++ +G  P    +  LL 
Sbjct: 372 AMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLG 431

Query: 344 GYVKMGYLKDAEFVVSEMERS-----------------------------------GVLP 368
           GY K G +++A     ++ER                                    G+ P
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHP 491

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TY+ +I  Y   G  + A+ +L++ME +   P++  Y+ I+ G+    +       L
Sbjct: 492 DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFL 551

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
           KE+       +     +++D   +   L + +  F R
Sbjct: 552 KEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 28/236 (11%)

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
           + F    CL  A + F +M++    P  ++++ L+        Y     +F E+ +    
Sbjct: 45  NEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIP 104

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
                 + ++N      R +    +L     +G+  N VT+TTL+       +  DA+  
Sbjct: 105 VDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHL 164

Query: 567 ------------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
                                   C +G + +A +  R+M     KP     N +I+AF 
Sbjct: 165 FKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFC 224

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV---FSSYLFFNIY 655
           +D     A ++L  MK+  + PD++TYT+L+  L ++ ++ KV   F   +  NIY
Sbjct: 225 KDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 159/342 (46%), Gaps = 11/342 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P        +  +  +G   +  A+FE++K  G  P  ++Y+ L+ G  K G  ++ 
Sbjct: 19  GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 78

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   M++ G   D   Y+ ++D +  +G+ + A   L+EM+V H  P    Y  I+ G
Sbjct: 79  SSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDG 138

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
                     + + +E KS G+E +   Y+ +ID FGK   +  A    + M+ +G+ P+
Sbjct: 139 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPN 198

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             TWN+L+D   K    + A   F+ M+E    P T TY+I+IN L   +++        
Sbjct: 199 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M+ QGL+PNVVTYTT++    + G   D           A + F   + +G  P   + 
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLAKVGNITD-----------ACSLFERFKANGGIPDAASF 307

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N+LI       R  EA+ V +  +  G + +V    +L+ AL
Sbjct: 308 NALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDAL 349



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 11/370 (2%)

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K++KE+     + D  LLN  +    KAGD  K        +G G  P   +Y+ +I  
Sbjct: 9   HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 68

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+ +G+  E  ++F  +K+ G     +AYNA++ G+ K G +  A   + EM+   V P 
Sbjct: 69  LTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPT 128

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
             TY  +ID  A   R + A ++ +E +    + N  +YS ++ G+   G     + +L+
Sbjct: 129 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 188

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           EM   G+ P+ + +N ++D   K   ++ A+  F  M      P+T T++ LI+   +  
Sbjct: 189 EMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 248

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           +Y++A   ++EMQ++G  P   TY  MI+ L +     D   L    +A G +P+  ++ 
Sbjct: 249 KYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFN 308

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
            L++    + R   AIE        A + F   R  G + +  A  SL++A  + +   +
Sbjct: 309 ALIEGMSHANR---AIE--------AYHVFEETRLRGCRINVKACISLLDALNKAECIEQ 357

Query: 610 AFAVLQYMKE 619
           A  V   ++E
Sbjct: 358 AAVVGAVLRE 367



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 7/360 (1%)

Query: 174 GRSEKLYEAFLLSQRQRLTP-LTY-NALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           GR E  ++ F    R+   P LT  N  +    +  D+EK   +   ++  G+  D  +Y
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           S++I  LT+  +   +    ++  ++     LD +  N V+ GF K+G   KA   L   
Sbjct: 63  SILIHGLTKAGQARET--SSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +   + P  ATY ++I  L+   R  EA  +FEE K  G++     Y++L+ G+ K+G +
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
            +A  ++ EM + G+ P+ +T++ L+DA   A     A I  + M+     PN++ YS +
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 240

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           + G     ++ + F   +EM+  G+ P+   Y  MI    K   +  A + F+R  + G 
Sbjct: 241 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGG 300

Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            PD  ++N LI+      R   A  +FEE + RG   C       I+LL    + E +++
Sbjct: 301 IPDAASFNALIEGMSHANRAIEAYHVFEETRLRG---CRINVKACISLLDALNKAECIEQ 357



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 11/263 (4%)

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           GR E    + KEM     +P+  + +  +      G+ ++   + +++K  G  PD   Y
Sbjct: 3   GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           +++I    K        + F  M   G   D   +N ++D   K G+ D+A E  EEM+ 
Sbjct: 63  SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122

Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
           +   P   TY  +I+ L + +R ++   L    +++G+  NV+ Y++L+D +G+ GR D+
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182

Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
           A   LE            M   GL P+    NSL++A  + +   EA    Q MKE    
Sbjct: 183 AYLILEE-----------MMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCS 231

Query: 624 PDVVTYTTLMKALIRVDKFHKVF 646
           P+  TY+ L+  L RV K++K F
Sbjct: 232 PNTYTYSILINGLCRVQKYNKAF 254



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++YS LI   G+  ++ EA+L+ +   ++ L P   T+N+L+ A  + +++ +AL     
Sbjct: 165 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQS 224

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++     +   YS++I  L R  K + + +   ++E++   +  +      +I G AK 
Sbjct: 225 MKEMKCSPNTYTYSILINGLCRVQKYNKAFV--FWQEMQKQGLVPNVVTYTTMISGLAKV 282

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G+ + A       +  G  P  A++ A+I  +S++ R IEA  VFEE +  G +   KA 
Sbjct: 283 GNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKAC 342

Query: 339 NALLKGYVKMGYLKDAEFV 357
            +LL    K   ++ A  V
Sbjct: 343 ISLLDALNKAECIEQAAVV 361



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 9/121 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL-- 185
           W+SL+  L  +    ++  A++ +   K   C      YSILI+ L R +K  +AF+   
Sbjct: 202 WNSLMDALVKAE---EINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258

Query: 186 -SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             Q+Q L P  +TY  +IS  A+  ++  A +L  + + +G   D  +++ +I+ ++  N
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHAN 318

Query: 243 K 243
           +
Sbjct: 319 R 319


>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
 gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 201/427 (47%), Gaps = 14/427 (3%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++A  + + + + G+    + Y+ ++ +LTR  +  +  +  L  E+E   I+ D  LLN
Sbjct: 74  QEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKA--ISGLLSEMEETGIKPDSILLN 131

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KE 328
            +I  F+++G+  +AM      +  G  P T+T+  +I       +  E+  + E + + 
Sbjct: 132 AIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRT 191

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           + LKP  + YN L+    K   +K+A  VV +M  SGV PD  TY+ L  AYA  G    
Sbjct: 192 TNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNK 251

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++ +M      PN      I+ GY ++G      +V+  M+  G+ P+   +N +I 
Sbjct: 252 AESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIK 311

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            F           A   M   G++PD IT++T+++     GR D+ +E+F++M + G  P
Sbjct: 312 GFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEP 371

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               ++I+             + LL  M   G+ PNVV +TT++  +  +G+ + A +  
Sbjct: 372 DIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVF 431

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E + D  V+           P+     +LI  +GE ++   A  +LQ M+E  + P+  T
Sbjct: 432 EHMCDMDVS-----------PNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENST 480

Query: 629 YTTLMKA 635
              + +A
Sbjct: 481 LKLVSEA 487



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G+  EA+ +F  L E G +P T  Y AL+    +    K    ++SEME +G
Sbjct: 63  LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD    + +I+A++ +G  + A  + ++ME S  KP +  ++ ++ GY    + + + 
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESM 182

Query: 426 QVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L+ M +++ ++P+   YN+++    K   +  A     +ML+ G++PD +T+NTL   
Sbjct: 183 KLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARA 242

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + + G  ++AE +  +M  +   P   T  I++    EQ    +  R++  MR  G+ PN
Sbjct: 243 YAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPN 302

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           +V + +L+      G  D       G SD    A  +M   G+KP  +  ++++N +   
Sbjct: 303 LVIFNSLIK-----GFLDI------GDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSA 351

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIY 655
            R  +   +   M ++G++PD+  ++ L K  +R  +  K  S   F + Y
Sbjct: 352 GRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKY 402



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/417 (22%), Positives = 179/417 (42%), Gaps = 38/417 (9%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           L+ Q  R T +TY AL++A  R    +    L+S+M + G   D I  + +I + + +  
Sbjct: 83  LVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGN 142

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTAT 302
           +  ++  ++++++E    +      N +I G+       ++M+ L  M +   L P   T
Sbjct: 143 VKEAM--EIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRT 200

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++ AL       EA  V  ++  SG++P    YN L + Y + G    AE ++ +M 
Sbjct: 201 YNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDML 260

Query: 363 RSGVLPDEHTYSLLIDAYANAGRW-ESARIV----------------------------- 392
              V P+E T  +++  Y   G   E+ R+V                             
Sbjct: 261 NKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSD 320

Query: 393 -----LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
                L  ME S  KP+   +S I+ G+   G   +  ++  +M  SG+EPD H ++++ 
Sbjct: 321 GVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILA 380

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
             F +      A +  + M   G+ P+ + + T+I      G+ ++A ++FE M +    
Sbjct: 381 KGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVS 440

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           P   T+  +I   GE ++    + +L  M    ++P   T   + + +   G  +DA
Sbjct: 441 PNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDA 497



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 159/359 (44%), Gaps = 46/359 (12%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAF----LLSQRQRLTP--LTYNALISACARNDDLEKA 212
           C      ++ LI   G   K  E+     L+++   L P   TYN L+ A  +   +++A
Sbjct: 158 CKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEA 217

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTR---TNKIDSSLLQKLYKEIE------------ 257
            N++ +M   G   D + Y+ + ++  +   TNK +S ++  L K++             
Sbjct: 218 WNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGG 277

Query: 258 -CDKIELDGQL-----------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
            C++  L   L                  N +I GF   GD+    + L M +  G+ P 
Sbjct: 278 YCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPD 337

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T++ ++   S++GR  + + +F+++ +SG++P    ++ L KG+V+ G    AE +++
Sbjct: 338 VITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLN 397

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            M + GV P+   ++ +I  +  AG+ E A  V + M      PN   +  ++ GY +  
Sbjct: 398 FMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAK 457

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           +  R  ++L+ M+   V P+     ++ + +     ++ A A       E  E + I W
Sbjct: 458 QPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAKA-------ERTEENEIPW 509


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 187/419 (44%), Gaps = 26/419 (6%)

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITAL 310
           ++ +I+  K +   Q  N +I+     G   K       M+      P T TY+A+I+A 
Sbjct: 181 IFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAF 240

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              GR   A  +  E+KE+G++P TK Y  L+  + K+  +  A  +  EM      PD 
Sbjct: 241 CKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDV 300

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            TY+ LI     AGR + A     EM+    +P++ + + ++      G      ++ +E
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQE 360

Query: 431 MKSSGVEPDTHFYNVMIDT-FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
           M +    P    YN +I   F   +      + F+RM   GI P + T++ LID   K  
Sbjct: 361 MGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 420

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R ++A  L EEM E+G+ PC   Y  +I+ LG+ +R++    L   ++      +   Y 
Sbjct: 421 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480

Query: 550 TLVDIYGQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTD 585
            ++   G++GR DDAI   +                        G+ D+A++  R M+  
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           G  P   + N ++N   +      A  +L  MK++ ++PDVV+Y T++ AL     F +
Sbjct: 541 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEE 599



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 188/405 (46%), Gaps = 8/405 (1%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A   LGR +   +     +   + P T  Y  LI+   + DD+  AL
Sbjct: 226 CFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGAL 285

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
           +L  +MR      D   Y+ +I+ L +  +ID +     + E++ +    D  ++N++I 
Sbjct: 286 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAY--HFFYEMQREGCRPDTVVMNNMIN 343

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESGLK 332
              KAG    AM+       +   P   TY  +I AL  S  R  E  + FE +KESG+ 
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P +  Y+ L+ G+ K   ++ A  ++ EM+  G  P    Y  LIDA   A R++ A  +
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            +E++ +    ++ +Y+ ++      G       +  EM   G  PD + YN ++    +
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              L  A++   RM   G  PD  ++N +++   K G   RA E+   M++    P   +
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 583

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           YN ++  L     +E+  +L+  M   G   +++TY+++++  G+
Sbjct: 584 YNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 180/402 (44%), Gaps = 25/402 (6%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    + +I  F K G    A + L   +  G+ P T  Y  +IT          A ++F
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           EE++    +P    Y  L++G  K G + +A     EM+R G  PD    + +I+    A
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           GR + A  + +EM      P+   Y+ I+ A +  +          + MK SG+ P +  
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+++ID F K N +  AM   + M  +G  P    + +LID   K  RYD A ELF+E++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           E         Y +MI  LG+  R +D   +   M   G  P+V  Y  L+    ++G  D
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528

Query: 563 DAIECLEGLSDQA----VNAFRV--------------------MRTDGLKPSNLALNSLI 598
           +A+  +  + +      +N++ +                    M+   ++P  ++ N+++
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 588

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            A        EA  +++ M   G + D++TY+++++A+ +VD
Sbjct: 589 GALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVD 630



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 198/447 (44%), Gaps = 18/447 (4%)

Query: 161 SYELLYSILIHALGRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           +Y  +  +L+H  G+  K++E +  +S      P  +TY+ALISA  +    + A  L++
Sbjct: 196 AYNSMIIMLMHE-GQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLN 254

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M+++G       Y+++I    + + +  +L   L++E+       D     ++I G  K
Sbjct: 255 EMKENGMQPTTKIYTMLITLFFKLDDVHGAL--SLFEEMRHQYCRPDVFTYTELIRGLGK 312

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG   +A  F    Q  G  P T     +I  L  +GR  +A  +F+E+      P    
Sbjct: 313 AGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVT 372

Query: 338 YNALLKG-YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           YN ++K  +       +       M+ SG+ P   TYS+LID +    R E A ++L+EM
Sbjct: 373 YNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEM 432

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
           +     P    Y  ++        +    ++ +E+K +        Y VMI   GK   L
Sbjct: 433 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 492

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A+  FD M   G  PD   +N L+    + G  D A      MQE G  P   +YNI+
Sbjct: 493 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNII 552

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +N L +         +L NM+   + P+VV+Y T++     +G F++A + +E       
Sbjct: 553 LNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEE------ 606

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGE 603
                M T G +   +  +S++ A G+
Sbjct: 607 -----MNTLGFEYDLITYSSILEAIGK 628



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 18/218 (8%)

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTF---GKYNCLHHAMAAFDRMLSEG-IEPDTITW 478
           +   +  ++K+   +P    YN MI      G+Y  +H     ++ M +EG   PDT+T+
Sbjct: 177 KAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHEL---YNEMSTEGHCFPDTMTY 233

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           + LI    K GR D A +L  EM+E G  P T  Y ++I L  + +       L   MR 
Sbjct: 234 SALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRH 293

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
           Q   P+V TYT L+   G++GR D           +A + F  M+ +G +P  + +N++I
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRID-----------EAYHFFYEMQREGCRPDTVVMNNMI 342

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           N  G+  R  +A  + Q M      P VVTY T++KAL
Sbjct: 343 NFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKAL 380



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 33/294 (11%)

Query: 87  LLNFLSENSNSESASALASSPSSL---------NRVEFKLAESY-RAVPAPLWHSLLKNL 136
           ++NFL +    + A  L     +L         N +   L ES  RA   P W   +K  
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400

Query: 137 CSSNSSIDLAYAVVSWLQKHNLCYSYELL--------------YSILIHALGRSEKLYEA 182
             S SS   +  +  + + + +  +  LL              Y  LI ALG++++   A
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLA 460

Query: 183 FLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
             L Q  +      +   Y  +I    +   L+ A+N+  +M + G   D   Y+ ++  
Sbjct: 461 CELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSG 520

Query: 238 LTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           L RT  +D +L   +  +E  C     D    N ++ G AK G   +AM  L   +   +
Sbjct: 521 LARTGMLDEALSTMRRMQEHGCIP---DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTV 577

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            P   +Y  V+ ALS++G   EA  + EE+   G +     Y+++L+   K+ +
Sbjct: 578 RPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 232/488 (47%), Gaps = 26/488 (5%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG-----RSEKL 179
           P  + ++++   C  N ++D AY + + ++  ++  +   + S++   L       + KL
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL 421

Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           ++  +      +   TYN+L+S   +   + +A ++  KM + G     ++Y+ +I    
Sbjct: 422 FDEAVACGIANV--FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 240 RTNKIDSS---LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           +   +DS+    ++ L K ++ + I     +L D   G+ K GD   A       +G  +
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITY--SVLMD---GYFKKGDTEYAFGLYDRMRGENI 534

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
           +P   T   +I  L  +GRT E++   ++L + G  P    YN ++ G+VK G +  A  
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           V +EM + GV P+  TY+ LI+ +  +   + A  V+ EM+    + +  +Y  ++ G+ 
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
            +G+     Q+L E++  G+ P+   Y+ MI  F K   +  A+    RM++EGI  D  
Sbjct: 655 RKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQ 714

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            + TLI    K G+   A EL+ EM  +G  P   TY+++I+ L  + + E+ +++L +M
Sbjct: 715 IYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + + P V  Y TL+     +G F       EG   +A      M   GL P +   + 
Sbjct: 775 DRKCMTPTVFIYNTLI-----TGHFK------EGNLQEAFRLHNEMLDKGLVPDDTTYDI 823

Query: 597 LINAFGED 604
           L+N   +D
Sbjct: 824 LVNGKVKD 831



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/552 (22%), Positives = 233/552 (42%), Gaps = 89/552 (16%)

Query: 162 YELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLM 216
           +E++++ +I    +  K+ EA      +LS  + +  +    L+    +  DL+ AL L 
Sbjct: 293 HEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELF 352

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
            KM ++G   + + Y+++I+   +   +D +   ++Y +++   I      +N +I G+ 
Sbjct: 353 DKMNENGICPNNVTYAVIIEWCCKNGNMDKAY--EIYNQMKNKDISPTVFNVNSLIRGYL 410

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KA    +A +    A   G++    TY ++++ L   G+  EA +++E++   G++P   
Sbjct: 411 KARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVV 469

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY---------------- 380
           +YN ++ G+ + G +  A  V  EM   G+ P+  TYS+L+D Y                
Sbjct: 470 SYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529

Query: 381 -------------------ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
                                AGR   ++  LK++      P    Y+ I+ G+   G  
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
                V  EM   GV P+   Y  +I+ F K N +  A+   D M ++GIE D   +  L
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCAL 649

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV----KRLL---- 533
           ID   + G    A +L  E+QE G  P    Y+ MI+   + +  E      KR++    
Sbjct: 650 IDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709

Query: 534 ---------------------------GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
                                        M A+G++P+++TY+ L+      G+ ++A +
Sbjct: 710 PCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK 769

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
            LE +  +            + P+    N+LI    ++    EAF +   M + GL PD 
Sbjct: 770 ILEDMDRKC-----------MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818

Query: 627 VTYTTLMKALIR 638
            TY  L+   ++
Sbjct: 819 TTYDILVNGKVK 830



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/442 (22%), Positives = 202/442 (45%), Gaps = 14/442 (3%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N  +S   +N+ + +A ++ +KM   G   D    S++I++  R  K++ +  +  ++E 
Sbjct: 193 NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEA--EGWFREA 250

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
           +   +ELD +  + VI    K  D+  A+  L   +  G  P    +  VI      G+ 
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           +EA  V  E+   G          L+KGY K G L  A  +  +M  +G+ P+  TY+++
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           I+     G  + A  +  +M+     P  F  + ++ GY      +   ++  E  + G+
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
             +   YN ++    K   +  A + +++M+ +G+ P  +++N +I  H + G  D A  
Sbjct: 431 A-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +F EM E+G  P   TY+++++   ++   E    L   MR + + P+  T   +++   
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
           ++GR           + ++ +  + +  +G  P+ +  N +I+ F ++     A AV   
Sbjct: 550 KAGR-----------TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 617 MKENGLKPDVVTYTTLMKALIR 638
           M + G+ P+V TYT L+    +
Sbjct: 599 MCKIGVSPNVFTYTNLINGFCK 620



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 12/332 (3%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  V+ ++   G+K      + +++  ++ G L++AE    E +  GV  D   YS++I
Sbjct: 207 EARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVI 266

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           +A        +A  +L+EM      P+  I++R++     +G+     +V  EM S G  
Sbjct: 267 EAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKP 326

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            +      ++  + K   L  A+  FD+M   GI P+ +T+  +I+   K G  D+A E+
Sbjct: 327 MNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEI 386

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           + +M+ +   P     N +I    +    E+  +L     A G + NV TY +L+     
Sbjct: 387 YNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTYNSLLSWL-- 443

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
                    C EG   +A + +  M   G++PS ++ N++I    +      A  V   M
Sbjct: 444 ---------CKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E GLKP+++TY+ LM    +       F  Y
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 167/339 (49%), Gaps = 15/339 (4%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            A   A++     SG   EA  VF+ +   G+ P    Y AL+ GY   G+ +    + +
Sbjct: 38  VAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFA 97

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM R GV P+ +TY+ LI  +   G ++SAR++  EM V     N   Y+ ++AG     
Sbjct: 98  EMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHS 157

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   Q+ + M+  G+ P    +N++ID +GK   + +A+  F++M + G+ P  +T+N
Sbjct: 158 KLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYN 217

Query: 480 TLIDCHFKCGRYD--RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
            LI C F C   D  RA   F +M+ERG  P   TY I+I    ++   +    +L  M 
Sbjct: 218 ELI-CGF-CRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEME 275

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL  +V +Y  L+              C+EG    A   F+ M   G+KP+++  + +
Sbjct: 276 KAGLEVDVQSYGVLLHAL-----------CMEGKMMHARKLFQSMDLKGVKPNSVLYDMM 324

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           I  +G +    +A  ++  M++NGL P+V +Y   ++ L
Sbjct: 325 IYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLL 363



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 11/364 (3%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            ++GD ++A R   +   +G++P   TY A+I      G      A+F E++  G++P  
Sbjct: 49  CQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNL 108

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+  + + G  K A  +  EM   GV+ +  +Y++LI       + + A  + + 
Sbjct: 109 YTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEA 168

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M     +P+   ++ ++ GY   G+         +MK++G+ P    YN +I  F +   
Sbjct: 169 MRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRD 228

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A+ AF  M   G+ P  +T+  LI    K    DRA  +  EM++ G      +Y +
Sbjct: 229 IARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGV 288

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +++ L  + +    ++L  +M  +G+ PN V Y  ++  YG+           EG S +A
Sbjct: 289 LLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGR-----------EGSSYKA 337

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           +     MR +GL P+  +    I     + +  EA A++  M+  GL+        L+ A
Sbjct: 338 LRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397

Query: 636 LIRV 639
             R+
Sbjct: 398 KARL 401



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 43/402 (10%)

Query: 169 LIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           L+H   +S  + EA   F +  R  + P  +TY ALI+        E    L ++MR+DG
Sbjct: 44  LVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDG 103

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              +   Y+ +I    RT +  S+ L  L+     D++ + G + N V            
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFKSARL--LF-----DEMPVKGVVHNVV------------ 144

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
                             +Y  +I  L    +  +A  +FE ++  G++P    +N L+ 
Sbjct: 145 ------------------SYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLID 186

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           GY K G + +A    ++M+ +G+ P   TY+ LI  +        A     +M+     P
Sbjct: 187 GYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAP 246

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
               Y+ ++A +    E  R F +L EM+ +G+E D   Y V++        + HA   F
Sbjct: 247 TKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLF 306

Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
             M  +G++P+++ ++ +I  + + G   +A  L  EM++ G  P   +Y + I LL  +
Sbjct: 307 QSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNE 366

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ-SGRFDDA 564
            + ++ + L+ +M   GL  +      L+D   +  G  DD+
Sbjct: 367 GKCQEAEALIDDMEHAGLQTSETICRILLDAKARLHGSTDDS 408



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 14/230 (6%)

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           D  E +R F V+  +   GV P+   Y  +I+ +          A F  M  +G+EP+  
Sbjct: 53  DVAEARRVFDVMPRL---GVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLY 109

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N LI    + G +  A  LF+EM  +G      +YNI+I  L    + +D  +L   M
Sbjct: 110 TYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAM 169

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           R +G+ P++VT+  L+D YG++G+  +A+           + F  M+  GL PS +  N 
Sbjct: 170 RREGIRPSIVTFNLLIDGYGKAGKMANAL-----------HFFNQMKAAGLPPSVVTYNE 218

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           LI  F   +  A A      MKE GL P  VTYT L+ A  + ++  + F
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAF 268



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 11/188 (5%)

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
           FD M   G+ P+ +T+  LI+ +F  G  +    LF EM+  G  P   TYN +I     
Sbjct: 61  FDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCR 120

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
              ++  + L   M  +G++ NVV+Y  L+    +  +  DA++            F  M
Sbjct: 121 TGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQ-----------LFEAM 169

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           R +G++PS +  N LI+ +G+  + A A      MK  GL P VVTY  L+    RV   
Sbjct: 170 RREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDI 229

Query: 643 HKVFSSYL 650
            +   ++L
Sbjct: 230 ARAVRAFL 237



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 95/177 (53%), Gaps = 4/177 (2%)

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           AFL  + + L P  +TY  LI+A A+ +++++A  ++S+M + G   D  +Y +++ +L 
Sbjct: 235 AFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALC 294

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
              K+  +  +KL++ ++   ++ +  L + +I G+ + G + KA+R +   +  GL P 
Sbjct: 295 MEGKMMHA--RKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPN 352

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            A+Y   I  L N G+  EAEA+ ++++ +GL+        LL    ++    D  F
Sbjct: 353 VASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDAKARLHGSTDDSF 409


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 222/480 (46%), Gaps = 27/480 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+ +++    ++  L +   L+ +M + G + + ++Y++++ +L +  K+  +L+    
Sbjct: 11  VTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLAC 70

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +  +  ++    +  +I G  K+G   +A         + L P   TY+A+I +    
Sbjct: 71  MIVRGNNFDVIACTV--LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKL 128

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    AE+   E++E    P    Y++L+ GYVK G L DA  V+ +M     +P+  TY
Sbjct: 129 GDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTY 188

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+D    AG  + A  +  +M+    K N FI    +   +  G  +   +++ +M S
Sbjct: 189 AILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMAS 248

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   Y  ++D F K   +  A+     M S+ +  D +T+N LI+C FK G+ D 
Sbjct: 249 GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD- 307

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            E ++  M+E G  P   TYN M+N   ++  W     L   M+++ L+PN +T   +++
Sbjct: 308 TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMIN 367

Query: 554 IYGQSGRFDDAIECLE-----GL-------------------SDQAVNAFRVMRTDGLKP 589
              ++GR ++AI+ L+     GL                   +D  +    ++    LK 
Sbjct: 368 GLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKV 427

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                N LI+   +     +A AVL+ M+E G+  D  TY  L+          + F +Y
Sbjct: 428 DKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTY 487



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 14/344 (4%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G G+ P   T+ +++  L   G+  E + +  E+ + G+     +Y  LL    K G + 
Sbjct: 3   GSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVA 62

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A   ++ M   G   D    ++LID    +G+ + A  +   +   +  PN   YS ++
Sbjct: 63  EALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALI 122

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
                 G+       L EM+     P+   Y+ +I+ + K   LH A     +M+ +   
Sbjct: 123 DSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM 182

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+  L+D  FK G  D A +L+ +M++ G        +  +N +    R E+ + L
Sbjct: 183 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 242

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           +  M + GL P++V YT L+D + +SG+   A+   + ++ + V  F +          +
Sbjct: 243 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV-VFDI----------V 291

Query: 593 ALNSLINA-FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LIN  F   + D E  ++   M+E GL PD+ TY T++  
Sbjct: 292 TFNVLINCLFKLGKSDTE--SIYSAMREMGLSPDLATYNTMLNG 333



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 175/418 (41%), Gaps = 24/418 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACAR--NDDLEKALNLMSK 218
           Y+ L+    +S K+  A  L+Q           +T+N LI+   +    D E   ++ S 
Sbjct: 258 YTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE---SIYSA 314

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR+ G   D   Y+ ++    +     S+L  +L+ E++  K+  +    N +I G  +A
Sbjct: 315 MREMGLSPDLATYNTMLNGNFKKGNWTSAL--ELWNEMKSRKLIPNAITCNIMINGLCEA 372

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A+  L     +GL P + TY  ++   S S R        E L    LK     Y
Sbjct: 373 GRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVY 432

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+    K+G  + A  V+ +ME  G++ D  TY+ LI  Y  +   + A +    M  
Sbjct: 433 NILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLS 492

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ +L G    G       +L E+K  G+ P+   Y  ++    K      
Sbjct: 493 ERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKE 552

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI- 517
            +  +  M+ +G  P    +N LI    K G+  +A+EL  EMQ +G  P  TTY+I+I 
Sbjct: 553 CLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILIC 612

Query: 518 ---NLLGEQERWE--------DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              NLL   +           + KRL   M  +G +P   T   +   +   G+  DA
Sbjct: 613 GWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADA 670



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 11/281 (3%)

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M  SG+ PD  T+  ++      G+    +++L+EM       N+  Y+ +L      G+
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
                  L  M   G   D     V+ID   K   +  A   F  +    + P+ IT++ 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           LID   K G  + AE    EM+E+   P   TY+ +IN   +Q    D  ++L  M  + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
            +PN+ TY  L+D     G F        G  D A++ +  M+  GLK +   L++ +N 
Sbjct: 181 AMPNICTYAILLD-----GSFK------AGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 229

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                R  EA  ++  M   GLKPD+V YT LM   ++  K
Sbjct: 230 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGK 270


>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Vitis vinifera]
          Length = 635

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 214/439 (48%), Gaps = 38/439 (8%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++  +++  + + G+    + Y+ ++ +LT     DS  +  +  ++E + +E D    N
Sbjct: 89  QEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDS--IHSIISQVEENGMEPDSIFFN 146

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KE 328
            VI  F+++G+  +AM++    +  G  P T+T+  +I     +G   E++ + E + ++
Sbjct: 147 AVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQD 206

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             ++P  + YN L++ +     +  A  VV +M  SG+ PD  TY+ +  AYA  G    
Sbjct: 207 ENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQ 266

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++ EM+ S+ +PN      I+ GY   G+ +   Q +  MK  G++P+   +N +I 
Sbjct: 267 AEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIK 326

Query: 449 TFGKYNCLHHAMAAFDR---------MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            F         + A DR         M   G++PD IT++T+++     G  D+  E+F+
Sbjct: 327 GF---------IDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFD 377

Query: 500 EMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +M +    P    Y+I+       GE E+ E++   L  M   G  PNVV +TT+++ + 
Sbjct: 378 DMVKARIQPDAHVYSILAKGYVRAGEPEKAEEI---LNAMIKSGFHPNVVIFTTIINGWC 434

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
            +GR + AI+  E + +            G+ P+     +LI  +GE ++  ++  VLQ 
Sbjct: 435 SAGRMEYAIKIFEKMCEC-----------GIAPNLKTFETLIWGYGEARQPWKSEEVLQI 483

Query: 617 MKENGLKPDVVTYTTLMKA 635
           M+E  ++P+  T   + +A
Sbjct: 484 MEEFNVQPEKTTLLLVAEA 502



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 176/366 (48%), Gaps = 3/366 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  L++A       +   +++S++ ++G   D I ++ VI + + +  +  ++  K +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAM--KYF 165

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSN 312
            +++    +      N +I G+  AG+  ++ + L  M+Q   + P   TY  ++ A  N
Sbjct: 166 WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCN 225

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
               ++A  V  ++  SGL+P    YN +   Y + G    AE ++ EM+ S V P+E T
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
             ++I  Y   G+ + A   +  M+    +PN  +++ ++ G+ D  +     +VL  M+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV+PD   ++ +++ +     +      FD M+   I+PD   ++ L   + + G  +
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AEE+   M + G+ P    +  +IN      R E   ++   M   G+ PN+ T+ TL+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465

Query: 553 DIYGQS 558
             YG++
Sbjct: 466 WGYGEA 471



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 41/339 (12%)

Query: 176 SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSL 233
           S+KL E  L+SQ + + P   TYN L+ A     ++ KA N++ KM   G   D + Y  
Sbjct: 196 SQKLLE--LMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTY-- 251

Query: 234 VIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
                                              N +   +A+ G+AS+A   +   Q 
Sbjct: 252 -----------------------------------NTIATAYAQNGEASQAEGIILEMQN 276

Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
             + P   T   +I      G+  EA      +K+ GL+P    +N+L+KG++       
Sbjct: 277 SNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
              V++ ME  GV PD  T+S +++A++ AG  +  R +  +M  +  +P++ +YS +  
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
           GY   GE ++  ++L  M  SG  P+   +  +I+ +     + +A+  F++M   GI P
Sbjct: 397 GYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAP 456

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +  T+ TLI  + +  +  ++EE+ + M+E    P  TT
Sbjct: 457 NLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  E +++ + + E G KP    Y  LL       +      ++S++E +G+ PD   +
Sbjct: 86  GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-K 432
           + +I+A++ +G  + A     +M+ S +KP +  ++ ++ GY   GE + + ++L+ M +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P+   YNV++  +     +  A     +M++ G++PD +T+NT+   + + G   
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AE +  EMQ     P   T  I+I    ++ + ++  + +  M+  GL PN+V + +L+
Sbjct: 266 QAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLI 325

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                   F DA++      D       +M   G+KP  +  ++++NA+       +   
Sbjct: 326 K------GFIDAVD-----RDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCRE 374

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +   M +  ++PD   Y+ L K  +R  +  K
Sbjct: 375 IFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 28/299 (9%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++     GR +  + +L  +     KP+   Y+ +LA    +  +     ++ +++ +G
Sbjct: 78  LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +EPD+ F+N +I+ F +   +  AM  F +M   G +P T T+NTLI  +   G  + ++
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197

Query: 496 ELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +L E M Q+    P   TYN+++     ++       ++  M A GL P+ VTY T+   
Sbjct: 198 KLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATA 257

Query: 555 YGQSGRFDDA----IE--------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           Y Q+G    A    +E                    C EG   +A+     M+  GL+P+
Sbjct: 258 YAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPN 317

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +  NSLI  F +         VL  M+E G+KPDV+T++T+M A      +DK  ++F
Sbjct: 318 LVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 220/484 (45%), Gaps = 20/484 (4%)

Query: 159 CYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKAL 213
           C      Y+I+I+A    GR+      F L   +   P  +T+N +I+A  +  ++ +A 
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 356

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L   +++ G+  + I Y+ ++    +  +ID +    LY+E+    I  DG   N ++ 
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQA--NMLYEEMRKKGIAPDGITFNILVS 414

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           G  K G      R L     +GL P  + +   ++ L  +GR  EA     ++ E GL P
Sbjct: 415 GHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSP 474

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSE-MERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
              A+N+++  Y + G L+D  F   + M   G+ P   T S L+   +  GR + A  +
Sbjct: 475 SIIAFNSVIAAYSQAG-LEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 533

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           + +M       N+  ++ +L  +  RG+      +  EM+  G+ PD   ++  ID   K
Sbjct: 534 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSK 593

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              +  A   F  ML +G+ P+   +N+LI    KCG+ + A +L + M+ RG  P   T
Sbjct: 594 QGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFT 653

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            N++I  L +Q R      +  +M   GL P+++TY TL++ Y ++    +A        
Sbjct: 654 TNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNA-------- 705

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D  VN    M   G  P     N  I+ F   +R   A  +L  +   G+ P+ VTY ++
Sbjct: 706 DNLVNR---MYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSM 762

Query: 633 MKAL 636
           +  +
Sbjct: 763 LNGV 766



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 205/464 (44%), Gaps = 26/464 (5%)

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +AL ++ +MR+ G        +++ + L R    D   + KL+K++     +      + 
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVG--DYGNVWKLFKDVIRRGPQPCKYTFSG 271

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I+GF + G        L +       P    Y  VI A    GRT +A A F  + E G
Sbjct: 272 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 331

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    +N ++  + K G + +A  +   ++  G  P+   Y+ L++ Y      + A 
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++ +EM      P+   ++ +++G+   G  +   ++LK++   G+ PD   +++ +   
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                L  AM     ML +G+ P  I +N++I  + + G  D+A E ++ M   G  P  
Sbjct: 452 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD-------------IYGQ 557
           +T + ++  L    R ++   L+G M  +GL  N + +T L+D             ++G+
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 558 ---SGRFDDAIE--------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
               G F D +           +GL ++A N F  M   GL P+N A NSLI  F +  +
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
             EA  + + M+  GL PD+ T   ++  L +  +     + ++
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 675



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 23/386 (5%)

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E D  +L+ ++  F  A    +A+  LG  + VG+ P  +  A +   L   G       
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +F+++   G +P    ++ ++ G+ + G +   E ++  M +    P+   Y+++I+A  
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG---EWQRTFQVLKEMKSSGVEP 438
             GR   A      M      P    ++ ++  +   G   E ++ F  LKEM   G  P
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEM---GFSP 369

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           +   YN +++ + K   +  A   ++ M  +GI PD IT+N L+  H+K GR +  + L 
Sbjct: 370 NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLL 429

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +++   G  P  + ++I ++ L    R ++    L +M  +GL P+++ + +++  Y Q+
Sbjct: 430 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 489

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                      GL D+A  A+++M   GL PS    +SL+     + R  EA  ++  M 
Sbjct: 490 -----------GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHK 644
           E GL  + + +T L+      DKF K
Sbjct: 539 EKGLSVNNMAFTVLL------DKFFK 558


>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 213/468 (45%), Gaps = 18/468 (3%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGY 224
           +ILI   G    +   F L ++   ++   TY  L+ A  R+++  KA  +  ++R+ GY
Sbjct: 14  NILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGY 73

Query: 225 HCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
             D   Y++++ +L + NK+D   +  ++K+++    E D      +I    K G A ++
Sbjct: 74  KLDIFAYNMLLDALAKDNKVDQVYM--VFKDMKRKHCEPDEYTYTIMIRMTGKIGKADES 131

Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
           +         G +P    Y  +I AL+N+    +   +F ++ E+  +P    ++ +L  
Sbjct: 132 LTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNV 191

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
            V  G L   + VV   E S    ++  Y+ L+   +  G    A  +   M   H + +
Sbjct: 192 LVAEGQLGRLDEVV---EVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGD 248

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              Y  +L    D G+      +L ++    +  DT  YN ++   GK          ++
Sbjct: 249 RDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYE 308

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
           +M  +G  PD  ++N LI    + GR + A ++FEE++     P   ++N +IN LG+  
Sbjct: 309 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNG 368

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
             ++       MR +GL P+VVTY+TL++ +G++    D +E        A   F  M  
Sbjct: 369 DIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT----DKVE-------MACRLFDEMLA 417

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           +G  P+ +  N L++      R AEA  +   +K+ GL PD +TY  L
Sbjct: 418 EGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 465



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 200/407 (49%), Gaps = 11/407 (2%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR- 188
           +++L +  + ++ +D  Y V   +++ + C   E  Y+I+I   G+  K  E+  L Q  
Sbjct: 80  YNMLLDALAKDNKVDQVYMVFKDMKRKH-CEPDEYTYTIMIRMTGKIGKADESLTLFQEM 138

Query: 189 --QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
             +  TP  + YN +I A A N  ++K + L SKM ++    +   +S+++  L    + 
Sbjct: 139 TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQ- 197

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
               L +L + +E     ++  +   ++   +K G AS+A R                Y 
Sbjct: 198 ----LGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYM 253

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++ +L ++G+T EA  +  ++ E  +   T  YN +L    K+    D   +  +M++ 
Sbjct: 254 SMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQD 313

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G  PD  +Y++LI ++  AGR E A  + +E+E S  KP+   ++ ++      G+    
Sbjct: 314 GPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 373

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
               KEM+  G+ PD   Y+ +I+ FGK + +  A   FD ML+EG  P+ +T+N L+DC
Sbjct: 374 HMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDC 433

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
             + GR   A +L+ +++++G  P + TY ++  L     +   V+R
Sbjct: 434 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVRR 480



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 159/339 (46%), Gaps = 14/339 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++ AL+   +  +   VF+++K    +P    Y  +++   K+G   ++  +  EM 
Sbjct: 80  YNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMT 139

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             G  P+   Y+ +I A AN    +    +  +M  ++ +PN F +S IL      G+  
Sbjct: 140 EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLG 199

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           R  +V++    S    +   Y  ++ T  K      A   F  M S   E D   + +++
Sbjct: 200 RLDEVVE---VSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSML 256

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +     G+   A +L  ++ E+     T  YN +++ LG+ ++  D+  L   M+  G  
Sbjct: 257 ESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPS 316

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++ +Y  L+  +G++GR ++A++  E L + +            KP  ++ NSLIN  G
Sbjct: 317 PDIFSYNILISSFGRAGRVEEAVKIFEELENSSC-----------KPDIISFNSLINCLG 365

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           ++    EA    + M+E GL PDVVTY+TL++   + DK
Sbjct: 366 KNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDK 404


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 11/382 (2%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           K+ LD      VI G  +AG+  K+   L   +  G SP    Y  +I      G   +A
Sbjct: 158 KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +F E+ + GL      Y  L+ G  K G  K    +  +M+  GV P+ HTY+ +++ 
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
               GR + A  V  EM       N   Y+ ++ G     +     +V+ +MKS G+ P+
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN +ID F     L  A++    + S G+ P  +T+N L+    K G    A ++ +
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM+ERG  P   TY I+I+     +  E   +L  +M   GL P+V TY+ L+  +    
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF---- 453

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C++G  ++A   F+ M     +P+ +  N+++  + ++     A  + + M+E
Sbjct: 454 -------CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEE 506

Query: 620 NGLKPDVVTYTTLMKALIRVDK 641
             L P+V +Y  +++ L +  K
Sbjct: 507 KELPPNVASYRYMIEVLCKERK 528



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 193/401 (48%), Gaps = 13/401 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           ++  +I  C    ++EK+ +L+ ++R+ G+  + + Y+ +I    +  +I+ +  + L+ 
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA--KDLFF 222

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +  +      +I G  K G   +        Q  G+ P   TY  V+  L   G
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDG 282

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           RT +A  VF+E++E G+      YN L+ G  +     +A  V+ +M+  G+ P+  TY+
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYN 342

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LID +    +   A  + ++++     P+   Y+ +++G+  +G+     +V+KEM+  
Sbjct: 343 TLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++P    Y ++IDTF + + +  A+     M   G+ PD  T++ LI      GR + A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEA 462

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
             LF+ M E+ + P    YN M+    ++       RL   M  + L PNV +Y  ++++
Sbjct: 463 SRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
             +  +  +A    EGL ++ +++       G+ PS+  LN
Sbjct: 523 LCKERKSKEA----EGLVEKMIDS-------GIGPSDSILN 552



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 182/387 (47%), Gaps = 5/387 (1%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           YS+ ++      A G  EK ++  +  +    +P  + Y  LI  C +  ++EKA +L  
Sbjct: 164 YSFGIVIKGCCEA-GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   +   Y+++I  L + N I     + +Y++++   +  +    N V+    K
Sbjct: 223 EMGKFGLVANEWTYTVLIHGLFK-NGIKKQGFE-MYEKMQEHGVFPNLHTYNCVMNQLCK 280

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A +     +  G+S    TY  +I  L    +  EA  V +++K  G+ P    
Sbjct: 281 DGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLIT 340

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G+  +  L  A  +  +++  G+ P   TY++L+  +   G    A  V+KEME
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   Y+ ++  +      ++  Q+   M+  G+ PD H Y+V+I  F     ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  M+ +  EP+ + +NT++  + K G   RA  LF EM+E+   P   +Y  MI
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMI 520

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPN 544
            +L ++ + ++ + L+  M   G+ P+
Sbjct: 521 EVLCKERKSKEAEGLVEKMIDSGIGPS 547



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 12/346 (3%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           K+  Y  +I A   S     +   F E+ + G  P +  +N LL   V            
Sbjct: 93  KSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFF 152

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           +E +   VL D +++ ++I     AG  E +  +L E+      PN  IY+ ++ G   +
Sbjct: 153 NESKIKVVL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKK 211

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           GE ++   +  EM   G+  +   Y V+I    K          +++M   G+ P+  T+
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +++   K GR   A ++F+EM+ERG      TYN +I  L  + +  +   ++  M++
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            G+ PN++TY TL+D +           C      +A++  R +++ GL PS +  N L+
Sbjct: 332 DGINPNLITYNTLIDGF-----------CGVRKLGKALSLCRDLKSRGLSPSLVTYNILV 380

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           + F +    + A  V++ M+E G+KP  VTYT L+    R D   K
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 168/397 (42%), Gaps = 43/397 (10%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
           P  + ++ L + C     I+ A  +   + K  L  + E  Y++LIH L   G  ++ +E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL-VANEWTYTVLIHGLFKNGIKKQGFE 254

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +   Q   + P   TYN +++   ++   + A  +  +MR+ G  C+ + Y+ +I  L 
Sbjct: 255 MYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R  K                                     A++A   +   +  G++P 
Sbjct: 315 REMK-------------------------------------ANEANEVMDQMKSDGINPN 337

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I       +  +A ++  +LK  GL P    YN L+ G+ K G    A  VV 
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EME  G+ P + TY++LID +A +   E A  +   ME     P+   YS ++ G+  +G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKG 457

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
                 ++ K M     EP+   YN M+  + K    + A+  F  M  + + P+  ++ 
Sbjct: 458 RMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            +I+   K  +   AE L E+M + G  P  +  N++
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 132/316 (41%), Gaps = 47/316 (14%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           K +++ Y  ++  YV+   L  + +  +EM   G +P  + ++ L+     +  +     
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
              E ++     + + +  ++ G  + GE +++F +L E++  G                
Sbjct: 151 FFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFG---------------- 193

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
                                P+ + + TLID   K G  ++A++LF EM + G      
Sbjct: 194 -------------------FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TY ++I+ L +    +    +   M+  G+ PN+ TY  +++   + GR  DA +     
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK----- 289

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
                  F  MR  G+  + +  N+LI     + +  EA  V+  MK +G+ P+++TY T
Sbjct: 290 ------VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343

Query: 632 LMKALIRVDKFHKVFS 647
           L+     V K  K  S
Sbjct: 344 LIDGFCGVRKLGKALS 359



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 12/210 (5%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           +  Y V+I+ + +   L  ++  F+ M+ +G  P +  +N L+        +++    F 
Sbjct: 94  SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           E + +       ++ I+I    E    E    LL  +R  G  PNVV YTTL+D      
Sbjct: 154 ESKIKVVLD-VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC---- 208

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C +G  ++A + F  M   GL  +      LI+   ++    + F + + M+E
Sbjct: 209 -------CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE 261

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +G+ P++ TY  +M  L +  +    F  +
Sbjct: 262 HGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 179/383 (46%), Gaps = 8/383 (2%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGY-HCDFINYSLVIQSLTRTNKID--SSLLQKLYKE 255
            + + A+       ++L ++M   G  H D+   +++I SL R + I    S+L K++K 
Sbjct: 92  FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDY-TLNILINSLCRLSHIHFAVSVLSKMFKL 150

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
                I+ D      +I G    G   +A+       G    P T T+  ++  L   G 
Sbjct: 151 ----GIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGM 206

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  VFE + E G++P    YNAL+ GY     + DA  V   M   G  P  H+YS+
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+ Y  + R + A+ +L +M      PN+  Y+ ++ G           ++ K+M SSG
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   Y++++D   K+  L  A+     M    +EPD + +N LI   F  G+ + A+
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ELF ++   G  P   TYNIMI  L ++   ++  +L   M   G LP+  +Y  ++  +
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF 446

Query: 556 GQSGRFDDAIECLEGLSDQAVNA 578
            Q+     AI+ ++ +  +  +A
Sbjct: 447 LQNQDPSTAIQLIDEMVGRRFSA 469



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 28/365 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G++    T   +I +L        A +V  ++ + G++P +  +  L+ G    G +K+A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + +EM     +P+  T+++L+D     G    AR V + M     +PN + Y+ ++ G
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y  R E     +V + M   G  P  H Y+++I+ + K   +  A A   +M  + + P+
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPN 295

Query: 475 TITWNTLID--CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           T+T+NTL+   CH        A+ELF++M   G  P   TY+I+++ L +    E+  +L
Sbjct: 296 TVTYNTLMQGLCH--ASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKL 353

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL------------------------ 568
           L +M+ + L P++V Y  L+     +G+ + A E                          
Sbjct: 354 LTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLK 413

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           EGLSD+A   FR M  DG  P + + N +I  F ++Q  + A  ++  M       D  T
Sbjct: 414 EGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSST 473

Query: 629 YTTLM 633
           +  L+
Sbjct: 474 FKMLL 478



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 13/299 (4%)

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           + ++M+  GV  +++T ++LI++         A  VL +M     +P+S  ++ ++ G  
Sbjct: 108 LCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLC 167

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           + G  +   ++  EM      P+T  + +++D   K   +  A   F+ M  +G+EP+  
Sbjct: 168 NEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIY 227

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N L++ +      + A ++FE M  +G  P   +Y+I+IN   +  R ++ K LL  M
Sbjct: 228 TYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQM 287

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
             + L+PN VTY TL+     +    +A E            F+ M + G+ P+    + 
Sbjct: 288 SEKELIPNTVTYNTLMQGLCHASSLLEAQE-----------LFKKMCSSGMLPNLRTYSI 336

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH--KVFSSYLFFN 653
           L++   +     EA  +L  M+E  L+PD+V Y  L++ +    K    K   S LF N
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFAN 395



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 140/323 (43%), Gaps = 42/323 (13%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           ++IL+  L +   + EA   F     + + P   TYNAL++      ++  A  +   M 
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G      +YS++I    ++ +ID                              AKA  
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDE-----------------------------AKA-- 282

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                  L       L P T TY  ++  L ++   +EA+ +F+++  SG+ P  + Y+ 
Sbjct: 283 ------LLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI 336

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           LL G  K G+L++A  +++ M+   + PD   Y++LI     AG+ E A+ +  ++  + 
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANG 396

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            +P+   Y+ ++ G    G     +++ ++M+  G  PD+  YNV+I  F +      A+
Sbjct: 397 IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAI 456

Query: 461 AAFDRMLSEGIEPDTITWNTLID 483
              D M+      D+ T+  L+D
Sbjct: 457 QLIDEMVGRRFSADSSTFKMLLD 479


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 192/441 (43%), Gaps = 13/441 (2%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN LI    R  D+ + L L+ +M   G+    + Y  +I  L +  K D   +  L+ E
Sbjct: 242 YNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGK--KGDLEKIGSLFLE 299

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  + Q+ N VI    K   A++AM  L      G  P   T+  +IT L + G 
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             +AE    E     L P   +Y  L+ G+   G L  A  ++ EM   G  PD  T+  
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI     AG+   A IV ++M      P+  IY+ +++G   +        +L+EM    
Sbjct: 420 LIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKN 479

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V+PD   Y  +ID F +   L  A   F+ M  +G+ PD ++ N +I  + + G    A 
Sbjct: 480 VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 539

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
                M++ G  P   TY  +I+   +Q       R L +M  +   PNVVTY++L++ Y
Sbjct: 540 LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGY 599

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            ++G  D A    EGL       F  M+ + L P+ +    LI +  +  +   A    +
Sbjct: 600 CKTGDTDSA----EGL-------FANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFE 648

Query: 616 YMKENGLKPDVVTYTTLMKAL 636
            M  N   P+ VT   L+  L
Sbjct: 649 TMLLNHCSPNDVTLHYLVNGL 669



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 177/419 (42%), Gaps = 49/419 (11%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G+ + GD  + +  LG  +  G  P   TY ++I  L   G   +  ++F E+++
Sbjct: 243 NVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRK 302

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P  + YN+++    K      A  ++ +M  SG  PD  T++ LI    + G    
Sbjct: 303 RGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 362

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------------- 435
           A   L+E       PN   Y+ ++ G+  RGE      +L EM   G             
Sbjct: 363 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIH 422

Query: 436 ----------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                                 V PD + YNV+I    K + L  A    + ML + ++P
Sbjct: 423 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQP 482

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D   + TLID   +      A ++FE M+ +G  P   + N MI    +     +    +
Sbjct: 483 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCM 542

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            NMR  G +P+  TYTT++  Y + G  + A   L  L D        M     KP+ + 
Sbjct: 543 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGA---LRWLCD--------MIKRKCKPNVVT 591

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
            +SLIN + +      A  +   M+   L P+VVTYT L+ +L + D   KV  + L+F
Sbjct: 592 YSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKD---KVLRAGLYF 647



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 19/489 (3%)

Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  LI+ LG+    EK+   FL  +++ L+P    YN++I A  +     +A+ ++ +M 
Sbjct: 277 YGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMF 336

Query: 221 QDGYHCDFINYSLVIQSLTR---TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
             G   D I ++ +I  L       K +  L + + +E+  +++         +I GF  
Sbjct: 337 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY-----TPLIHGFCM 391

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G+   A   L    G G +P   T+ A+I  L  +G+  EA  V E++ E  + P    
Sbjct: 392 RGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 451

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G  K   L  A+ ++ EM    V PDE  Y+ LID +  +     AR + + ME
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               +P+    + ++ GY   G        +  M+  G  PD   Y  +I  + K   L+
Sbjct: 512 HKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN 571

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+     M+    +P+ +T+++LI+ + K G  D AE LF  MQ     P   TY I+I
Sbjct: 572 GALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 631

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD-IYGQSGRFDDAIEC----LEGLS 572
             L ++++          M      PN VT   LV+ +   +    ++I C    + G  
Sbjct: 632 GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG-K 690

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D  +  F+ +  D   P N A N++I +        EA      M + G  P+ +T+ +L
Sbjct: 691 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 750

Query: 633 MKALIRVDK 641
           +     V K
Sbjct: 751 LYGFCSVGK 759



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 216/523 (41%), Gaps = 25/523 (4%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHN----------LCYSYELLYSILIHAL 173
           +P+PL  + L    SS    DLA A++SW Q  +          L +S  L         
Sbjct: 55  LPSPLSDAHLAAAVSSLPDPDLAVALLSWSQSPDHHVALQDPTPLAHSTLLRLLARSRRF 114

Query: 174 GRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR-QDGYHCDFINYS 232
              +   ++  L+     T     AL++A A    L KA ++  ++R Q G   +  + +
Sbjct: 115 DAVDDTLQSMSLAGAAP-TRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +++ L    + D +  +KLY E+  +    D      ++ G    G   + ++ +    
Sbjct: 174 RLLKLLVEQRRWDDA--RKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARW 231

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G G  P    Y  +I      G       +  E++  G  P    Y +L+    K G L+
Sbjct: 232 GAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLE 291

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
               +  EM + G+ P+   Y+ +IDA         A ++LK+M  S   P+   ++ ++
Sbjct: 292 KIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLI 351

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G    G  ++    L+E     + P+   Y  +I  F     L  A      M+  G  
Sbjct: 352 TGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHT 411

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PD +T+  LI      G+   A  + E+M ER  FP    YN++I+ L ++      K +
Sbjct: 412 PDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNI 471

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           L  M  + + P+   Y TL+D + +S          E L D A   F  M   G++P  +
Sbjct: 472 LEEMLEKNVQPDEFVYATLIDGFIRS----------ENLGD-ARKIFEFMEHKGVRPDIV 520

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           + N++I  + +    +EA   +  M++ G  PD  TYTT++  
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISG 563



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/303 (21%), Positives = 110/303 (36%), Gaps = 74/303 (24%)

Query: 163 ELLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
           E +Y+ LI    RSE L +A     F+  +  R   ++ NA+I    +   + +A+  MS
Sbjct: 484 EFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMS 543

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLNDVIV 273
            MR+ G   D   Y+ VI    +   ++ +L         CD I+   +      + +I 
Sbjct: 544 NMRKVGCIPDEFTYTTVISGYAKQGNLNGAL------RWLCDMIKRKCKPNVVTYSSLIN 597

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE------------- 320
           G+ K GD   A       Q   LSP   TY  +I +L    + + A              
Sbjct: 598 GYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 657

Query: 321 -------------------------------------AVFEELKESGLKPRTKAYNALLK 343
                                                 VF++L      PR  AYNA++ 
Sbjct: 658 NDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIF 717

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
              +   L++A    + M + G +P+  T+  L+  + + G+  + R +L         P
Sbjct: 718 SLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTIL---------P 768

Query: 404 NSF 406
           N F
Sbjct: 769 NEF 771


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 215/465 (46%), Gaps = 59/465 (12%)

Query: 164 LLYSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
           + Y++LI A G+     EA      LL  R   T  TY  LI A   +  LEKA  + ++
Sbjct: 156 ICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAE 215

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR  G     + Y+  I  L +    D +  ++++K ++ D  +   +    +I  + KA
Sbjct: 216 MRNYGLPSSAVVYNAYINGLMKGGNSDKA--EEIFKRMKKDACKPTTETYTMLINLYGKA 273

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G +  A++           P   TY A++ A +  G   +AE VFE+++E+GL+P   AY
Sbjct: 274 GKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAY 333

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           NAL++ Y + GY   A  + S M+  G  PD  +Y++L+DAY  AG              
Sbjct: 334 NALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAG-------------- 379

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
                           ++D  E      V K+MK  G+ P    + V++  + K   ++ 
Sbjct: 380 ----------------FQDDAE-----AVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNK 418

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                ++M   G++ DT   N++++ + + G++ + EE+   M++  Y    +TYNI+IN
Sbjct: 419 CEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILIN 478

Query: 519 LLGEQ---ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
             G+    ER ED+ +LL    ++GL P+VVT+T+ +  Y +   +   ++CLE      
Sbjct: 479 RYGQAGFIERMEDLFQLL---PSKGLKPDVVTWTSRIGAYSKKKLY---LKCLE------ 526

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
              F  M  DG  P       L+ A   + +  +   V++ M ++
Sbjct: 527 --IFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 11/338 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TYA +I A   SG   +AEAVF E++  GL      YNA + G +K G    AE +
Sbjct: 188 PTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEI 247

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
              M++    P   TY++LI+ Y  AG+   A  +  EM     KPN   Y+ ++  +  
Sbjct: 248 FKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAR 307

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G  ++  +V ++M+ +G+EPD + YN +++ + +    + A   F  M   G EPD  +
Sbjct: 308 EGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRAS 367

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N L+D + K G  D AE +F++M+  G  P   ++ ++++   +       + +L  M 
Sbjct: 368 YNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMC 427

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL  +     +++++YG+ G+F    E L           RVM            N L
Sbjct: 428 KSGLKLDTYVLNSMLNLYGRLGQFGKMEEVL-----------RVMEKGSYVADISTYNIL 476

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
           IN +G+         + Q +   GLKPDVVT+T+ + A
Sbjct: 477 INRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGA 514



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L  S  KP    YN L++ + +    K+AE    ++  +  +P E TY+LLI AY  +G 
Sbjct: 146 LLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGL 205

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            E A  V  EM       ++ +Y+  + G    G   +  ++ K MK    +P T  Y +
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTM 265

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I+ +GK      A+  F  M+S   +P+  T+  L++   + G  ++AEE+FE+MQE G
Sbjct: 266 LINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 325

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P    YN ++              +   M+  G  P+  +Y  LVD YG++G  DDA 
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDA- 384

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
                   +AV  F+ M+  G+ P+  +   L++A+ +     +   +L  M ++GLK D
Sbjct: 385 --------EAV--FKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLD 434

Query: 626 VVTYTTLMKALIRVDKFHKV 645
                +++    R+ +F K+
Sbjct: 435 TYVLNSMLNLYGRLGQFGKM 454



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
             P    Y  +I A        EAE+ + +L E+   P    Y  L+K Y   G L+ AE
Sbjct: 151 FKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAE 210

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
            V +EM   G+      Y+  I+     G  + A  + K M+    KP +  Y+ ++  Y
Sbjct: 211 AVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLY 270

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              G+     ++  EM S   +P+   Y  +++ F +      A   F++M   G+EPD 
Sbjct: 271 GKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDV 330

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
             +N L++ + + G    A E+F  MQ  G  P   +YNI+++  G+    +D + +  +
Sbjct: 331 YAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKD 390

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M+  G+ P + ++  L+  Y + G  +   +C E L+         M   GLK     LN
Sbjct: 391 MKRVGITPTMKSHMVLLSAYSKMGSVN---KCEEILNQ--------MCKSGLKLDTYVLN 439

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           S++N +G   +  +   VL+ M++     D+ TY  L+
Sbjct: 440 SMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILI 477



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 151/348 (43%), Gaps = 45/348 (12%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDL 209
           K + C      Y++LI+  G++ K + A      ++S   +    TY AL++A AR    
Sbjct: 252 KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLC 311

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           EKA  +  +M++ G   D   Y+ ++++                                
Sbjct: 312 EKAEEVFEQMQEAGLEPDVYAYNALMEA-------------------------------- 339

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
                +++AG    A     + Q +G  P  A+Y  ++ A   +G   +AEAVF+++K  
Sbjct: 340 -----YSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRV 394

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P  K++  LL  Y KMG +   E ++++M +SG+  D +  + +++ Y   G++   
Sbjct: 395 GITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKM 454

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             VL+ ME      +   Y+ ++  Y   G  +R   + + + S G++PD   +   I  
Sbjct: 455 EEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGA 514

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           + K       +  F+ M+ +G  PD  T   L+     C   D+ E++
Sbjct: 515 YSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLA---ACSNEDQTEQV 559


>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 670

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 223/491 (45%), Gaps = 26/491 (5%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRLTPLTYNA-----LISACARNDDLEKALNLMSKMRQ 221
           ++++  LG+ +  Y A  + +  R   +  NA     LI+A      L +AL L   M +
Sbjct: 186 NVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEK 245

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
            G       ++ ++ +  R    D+++  +L++E+E   I  D      ++     AG  
Sbjct: 246 AGIERPIFTFNALMVACGRCASGDTAV--ELFEEMEKLGIVPDRITFTGLVSATTAAGLW 303

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
            +A  F+ M Q  G S     Y  +  A + + +  EA  +F+ + E G + + ++YNAL
Sbjct: 304 DRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNAL 363

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           L  Y +    +DA      ++  G+ PD  ++S LI A ANAG+ E A  VL+ M+ S  
Sbjct: 364 LCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDC 423

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +PN   +  +L  Y+  G W++  ++   M  SG  P+   +  ++  + K       + 
Sbjct: 424 QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLY 483

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             +++   G++ D + W+T I    K G+++ AEE F++M + G  P   TY+ +I   G
Sbjct: 484 TIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYG 543

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
           +   WE  + +   M   G+ PN      L+  YG+    +  I   E +  Q       
Sbjct: 544 DVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQY------ 597

Query: 582 MRTDGLKPSNLALNSLINA---FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM---KA 635
               G++P   A  ++  A    GE QR   A   +  M+  G  PD V YTTL+   +A
Sbjct: 598 ----GVEPDKYAYAAIFWACWTCGEWQR---AVKYIDRMEMAGCTPDSVIYTTLINMYEA 650

Query: 636 LIRVDKFHKVF 646
             ++DK  +V 
Sbjct: 651 NGQIDKAMQVL 661



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 192/442 (43%), Gaps = 39/442 (8%)

Query: 167 SILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQ 221
           + LI ALG   +L +A  L +      +     T+NAL+ AC R    + A+ L  +M +
Sbjct: 221 TTLIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEK 280

Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSS-----LLQK------LYKEIE----CDKI----- 261
            G   D I ++ ++ + T     D +     ++Q       L++ IE    C +      
Sbjct: 281 LGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPRE 340

Query: 262 -------------ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
                        EL  +  N ++  + +      AMR     Q  GL+P   +++++I+
Sbjct: 341 AYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLIS 400

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           A +N+G+   A  V E +K S  +P   ++  LLK Y K G  + AE +   M  SG  P
Sbjct: 401 ACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPP 460

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +E  +  L+ AY    +W+     ++++E    K +   +S  ++     G+W+   +  
Sbjct: 461 NEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKF 520

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           K+M  SG  P+   Y+ +I  +G       A + F  ML  GI P+      L+  + K 
Sbjct: 521 KQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKG 580

Query: 489 GRYDRAEELFEEMQER-GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
              ++    FE M+ + G  P    Y  +         W+   + +  M   G  P+ V 
Sbjct: 581 KELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVI 640

Query: 548 YTTLVDIYGQSGRFDDAIECLE 569
           YTTL+++Y  +G+ D A++ LE
Sbjct: 641 YTTLINMYEANGQIDKAMQVLE 662



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/455 (20%), Positives = 184/455 (40%), Gaps = 82/455 (18%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           + +D + +N V+    +  +   A +     +  G+ P       +I AL    R  +A 
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQAL 237

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +F  ++++G++     +NAL+    +      A  +  EME+ G++PD  T++ L+ A 
Sbjct: 238 KLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSAT 297

Query: 381 ANAGRWESARIVLK---------------EMEVSHA---KPNSFI--------------- 407
             AG W+ A+  +                EM+ + A   KP                   
Sbjct: 298 TAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKL 357

Query: 408 --YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y+ +L  Y    +W+   +    ++  G+ PD   ++ +I           A+   +R
Sbjct: 358 ESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLER 417

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP-----CT---------- 510
           M +   +P+ ++W  L+  + K G +++AEE+F  M + G  P     C+          
Sbjct: 418 MKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQ 477

Query: 511 --------------------TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
                                 ++  I+ L +  +WE  +     M   G LPN+VTY++
Sbjct: 478 WKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSS 537

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+  YG             GL ++A + F++M   G++P+  A  +L+ A+G+ +   + 
Sbjct: 538 LIKAYGDV-----------GLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKV 586

Query: 611 FAVLQYMK-ENGLKPDVVTYTTLMKALIRVDKFHK 644
               + M+ + G++PD   Y  +  A     ++ +
Sbjct: 587 IIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQR 621



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 148/309 (47%), Gaps = 8/309 (2%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+ A  R+ +  +A   F+  Q + LTP  +++++LISACA     E+AL ++ +M+
Sbjct: 360 YNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMK 419

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 + +++  ++++  +T   + +  ++++  +       +      ++  + K   
Sbjct: 420 TSDCQPNVVSWCGLLKAYQKTGNWEKA--EEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQ 477

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             K +  +   + +G+      ++  I+AL+ +G+   AE  F+++ +SG  P    Y++
Sbjct: 478 WKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSS 537

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+K Y  +G  + AE V   M R G+ P+      L+ AY      E   I  + ME  +
Sbjct: 538 LIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQY 597

Query: 401 A-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             +P+ + Y+ I       GEWQR  + +  M+ +G  PD+  Y  +I+ +     +  A
Sbjct: 598 GVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKA 657

Query: 460 MAAFDRMLS 468
           M   +RM S
Sbjct: 658 MQVLERMGS 666



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/370 (20%), Positives = 155/370 (41%), Gaps = 66/370 (17%)

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L   E V+  +  +G+  D  + ++++        W +A  V +    +  +PN+++ + 
Sbjct: 163 LNSDEDVMKIVNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTT 222

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++A         +  ++ + M+ +G+E     +N ++   G+      A+  F+ M   G
Sbjct: 223 LIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLG 282

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY-----------FPCTT-------- 511
           I PD IT+  L+      G +DRA+   + MQ RG+           + C          
Sbjct: 283 IVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAY 342

Query: 512 ----------------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
                           +YN ++       +WED  R    ++ +GL P+V+++++L+   
Sbjct: 343 GLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISAC 402

Query: 556 GQSGRFDDAIECLE------------------------GLSDQAVNAFRVMRTDGLKPSN 591
             +G+ + A+E LE                        G  ++A   F  M   G  P+ 
Sbjct: 403 ANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNE 462

Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV-------DKFHK 644
           +A  SL++A+ + ++  +    ++ ++E G+K DVV ++T + AL +        +KF +
Sbjct: 463 VAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQ 522

Query: 645 VFSSYLFFNI 654
           +  S    NI
Sbjct: 523 MTKSGCLPNI 532


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 221/480 (46%), Gaps = 27/480 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T+ +++    ++  L +   L+ +M + G + + ++Y++++ +L +  K+  +L+    
Sbjct: 25  VTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLAC 84

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +  +  ++    +  +I G  K+G   +A         + L P   TY+A+I      
Sbjct: 85  MIVRGNNFDVIACTV--LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKL 142

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    AE+   E++E    P    Y++L+ GYVK G L DA  V+ +M     +P+  TY
Sbjct: 143 GDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTY 202

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++L+D    AG  + A  +  +M+    K N FI    +   +  G  +   +++ +M S
Sbjct: 203 AILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMAS 262

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   Y  ++D F K   +  A+     M S+ +  D +T+N LI+C FK G+ D 
Sbjct: 263 GGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD- 321

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            E ++  M+E G  P   TYN M+N   ++  W     L   M+++ L+PN +T   +++
Sbjct: 322 TESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMIN 381

Query: 554 IYGQSGRFDDAIECLE-----GL-------------------SDQAVNAFRVMRTDGLKP 589
              ++GR ++AI+ L+     GL                   +D  +    ++    LK 
Sbjct: 382 GLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKV 441

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                N LI+   +     +A AVL+ M+E G+  D  TY  L+          + F +Y
Sbjct: 442 DKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTY 501



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 157/344 (45%), Gaps = 14/344 (4%)

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
           G G+ P   T+ +++  L   G+  E + +  E+ + G+     +Y  LL    K G + 
Sbjct: 17  GSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVA 76

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A   ++ M   G   D    ++LID    +G+ + A  +   +   +  PN   YS ++
Sbjct: 77  EALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALI 136

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G    G+       L EM+     P+   Y+ +I+ + K   LH A     +M+ +   
Sbjct: 137 DGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAM 196

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           P+  T+  L+D  FK G  D A +L+ +M++ G        +  +N +    R E+ + L
Sbjct: 197 PNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 256

Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
           +  M + GL P++V YT L+D + +SG+   A+   + ++ + V  F +          +
Sbjct: 257 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNV-VFDI----------V 305

Query: 593 ALNSLINA-FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
             N LIN  F   + D E  ++   M+E GL PD+ TY T++  
Sbjct: 306 TFNVLINCLFKLGKSDTE--SIYSAMREMGLSPDLATYNTMLNG 347



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 175/418 (41%), Gaps = 24/418 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACAR--NDDLEKALNLMSK 218
           Y+ L+    +S K+  A  L+Q           +T+N LI+   +    D E   ++ S 
Sbjct: 272 YTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE---SIYSA 328

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           MR+ G   D   Y+ ++    +     S+L  +L+ E++  K+  +    N +I G  +A
Sbjct: 329 MREMGLSPDLATYNTMLNGNFKKGNWTSAL--ELWNEMKSRKLIPNAITCNIMINGLCEA 386

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G    A+  L     +GL P + TY  ++   S S R        E L    LK     Y
Sbjct: 387 GRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVY 446

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+    K+G  + A  V+ +ME  G++ D  TY+ LI  Y  +   + A +    M  
Sbjct: 447 NILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLS 506

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   Y+ +L G    G       +L E+K  G+ P+   Y  ++    K      
Sbjct: 507 ERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKE 566

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI- 517
            +  +  M+ +G  P    +N LI    K G+  +A+EL  EMQ +G  P  TTY+I+I 
Sbjct: 567 CLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILIC 626

Query: 518 ---NLLGEQERWE--------DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
              NLL   +           + KRL   M  +G +P   T   +   +   G+  DA
Sbjct: 627 GWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADA 684



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 142/324 (43%), Gaps = 46/324 (14%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           EA  ++EE+  SG+ P    + ++L G  K G L + + ++ EM + G+  +  +Y++L+
Sbjct: 7   EALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILL 66

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           DA   AG+   A + L  M V   + N+F                               
Sbjct: 67  DALFKAGKVAEALMTLACMIV---RGNNF------------------------------- 92

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
            D     V+ID   K   +  A   F  +    + P+ IT++ LID   K G  + AE  
Sbjct: 93  -DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESA 151

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             EM+E+   P   TY+ +IN   +Q    D  ++L  M  +  +PN+ TY  L+D    
Sbjct: 152 LHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLD---- 207

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G F        G  D A++ +  M+  GLK +   L++ +N      R  EA  ++  M
Sbjct: 208 -GSFK------AGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKM 260

Query: 618 KENGLKPDVVTYTTLMKALIRVDK 641
              GLKPD+V YT LM   ++  K
Sbjct: 261 ASGGLKPDLVNYTNLMDGFLKSGK 284



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 24/204 (11%)

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
           N L  A+  ++ M+  GI PD +T+ +++    K G+    + L  EM + G      +Y
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA--------- 564
            I+++ L +  +  +    L  M  +G   +V+  T L+D   +SG+  +A         
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122

Query: 565 ---------------IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                            C  G  + A +A   M      P+ +  +SLIN + +     +
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182

Query: 610 AFAVLQYMKENGLKPDVVTYTTLM 633
           AF VL+ M      P++ TY  L+
Sbjct: 183 AFKVLRKMVHKNAMPNICTYAILL 206



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           Q   E+   L   M   G+ P+VVT+ ++  +YG          C  G   +     R M
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSI--LYGL---------CKHGKLSEGKLLLREM 50

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              G+  +N++   L++A  +  + AEA   L  M   G   DV+  T L+  L +  + 
Sbjct: 51  GKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQI 110

Query: 643 HKVFSSYLFFNIYKM 657
            +  + YLF N+Y++
Sbjct: 111 KE--AEYLFCNLYQL 123


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 225/524 (42%), Gaps = 57/524 (10%)

Query: 159 CYSYELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKAL 213
           C    + Y++LI    R   +    LL    + + + P  +TY A+I    R  DL K  
Sbjct: 112 CVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVE 171

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLT--RTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           +L+ +MR  G   +   Y+ VI +L   R+    S +L ++ K     +   D    N +
Sbjct: 172 SLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKS----RFNPDVVTFNTM 227

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I GF + GD  +A++ L  A   GL P   +Y  +I      G  + A  +  E+   G 
Sbjct: 228 IAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGH 287

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P      AL+ G V  G + DA  V  +M    V+PD + Y++LI          +A+ 
Sbjct: 288 TPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKN 347

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L+EM     +P+ FIY+ ++ G+    +     ++ + M+     PD   YNVMI  + 
Sbjct: 348 LLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYC 406

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K+  +  A+     M   G  PD  T+ TL+D + K G    +  L  +M +R   P   
Sbjct: 407 KFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIF 466

Query: 512 TYNIMINL---LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV------DIYGQSGRF- 561
           TY  +I     +G+    ED   L   M+++GL PNVV YT L+      D   Q+  + 
Sbjct: 467 TYASLICGYCNIGDTYSAED---LFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYF 523

Query: 562 ----------DDA---------IECLEGL-------SDQA------VNAFRVMRTDGLKP 589
                     +DA         + C  G+       + QA      ++ FR + +DGL P
Sbjct: 524 EHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDP 583

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
              A N++I +        +A  +   M   G  PD +T+ +L+
Sbjct: 584 RISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLL 627



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 179/411 (43%), Gaps = 14/411 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+++I    R   I   LL  L  E+E   I         +I    + GD +K    LG 
Sbjct: 119 YNVLIDGYCRRGDIGRGLL--LLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGE 176

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +  GLSP    Y  VI AL       +A  +  ++ +S   P    +N ++ G+ + G 
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +++A  ++ E  R G+ P++ +Y+ LI  +   G    A  +L EM      P+      
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA 296

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G    G+      V ++M    V PD + YNV+I    K   L  A    + ML + 
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           ++PD   + TLID   +  +   A ++FE M+E+   P    YN+MI    +    ++  
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAV 415

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
             + +MR  G +P+  TYTTLVD Y + G   D    L  L D        M     KP+
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKG---DISASLRLLCD--------MMKRRCKPN 464

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
                SLI  +        A  +   M+  GL P+VV YT L+ +L + DK
Sbjct: 465 IFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDK 515



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 188/442 (42%), Gaps = 14/442 (3%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN LI    R  D+ + L L+ +M   G     + Y  +I  L R  K D + ++ L  E
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGR--KGDLTKVESLLGE 176

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    +  + Q+ N VI    K   AS+A   L        +P   T+  +I      G 
Sbjct: 177 MRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGD 236

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
             EA  +  E    GL+P   +Y  L+ G+   G    A  ++ EM   G  PD  T   
Sbjct: 237 VREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGA 296

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI     +G+   A IV ++M      P++ IY+ +++G   +        +L+EM    
Sbjct: 297 LIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQK 356

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V+PD   Y  +ID F + + L  A   F+ M  E   PD + +N +I  + K G    A 
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIFEFM-EEKACPDIVAYNVMIKGYCKFGMMKEAV 415

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
                M++ G  P   TY  +++   ++       RLL +M  +   PN+ TY +L+  Y
Sbjct: 416 TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGY 475

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C  G +  A + F  M+++GL P+ +    LI +  +  +  +A A  +
Sbjct: 476 -----------CNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFE 524

Query: 616 YMKENGLKPDVVTYTTLMKALI 637
           +M  N   P+  T   L+  L+
Sbjct: 525 HMLLNHCPPNDATVHYLVNGLV 546



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 201/430 (46%), Gaps = 40/430 (9%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISA-CARNDDLEKALNLMSKM 219
           ++ +I    R   + EA  L   + R+ L P  L+Y  LI   C R + +  A +L+ +M
Sbjct: 224 FNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAM-VASDLLVEM 282

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
              G+  D I    +I  L  + +++ +L+ +  +++   ++  D  + N +I G  K  
Sbjct: 283 MGRGHTPDMITLGALIHGLVVSGQVNDALIVR--EKMAERQVMPDANIYNVLISGLCKKR 340

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             S A   L       + P    Y  +I     S +  +A  +FE ++E    P   AYN
Sbjct: 341 MLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYN 399

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            ++KGY K G +K+A   +S M ++G +PDE TY+ L+D YA  G   ++  +L +M   
Sbjct: 400 VMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKR 459

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
             KPN F Y+ ++ GY + G+      +  +M+S G+ P+   Y V+I +  K + +  A
Sbjct: 460 RCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQA 519

Query: 460 MAAFDRMLSEGIEPDTIT----WNTLIDCHFKCGRYDRAE-----------ELFEEMQER 504
            A F+ ML     P+  T     N L++C       +R++           ++F  +   
Sbjct: 520 AAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISD 579

Query: 505 GYFPCTTTYNIMI------NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY--- 555
           G  P  + YN +I      N+LG+    +D       M  +G LP+ +T+ +L+  +   
Sbjct: 580 GLDPRISAYNAIIFSLCRHNMLGKAMDLKD------KMSNKGCLPDPITFLSLLYGFSSA 633

Query: 556 GQSGRFDDAI 565
           G+SG++  A+
Sbjct: 634 GESGKWRSAL 643



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 158/367 (43%), Gaps = 20/367 (5%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           ++ G    G   +    +    G G  P    Y  +I      G       +  E++  G
Sbjct: 87  MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKG 146

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    Y A++    + G L   E ++ EM   G+ P+   Y+ +I+A         A 
Sbjct: 147 IIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQAS 206

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L +M  S   P+   ++ ++AG+   G+ +   ++L+E    G+EP+   Y  +I  F
Sbjct: 207 DMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266

Query: 451 GKYNCLH-HAMAAFD---RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
               C+   AM A D    M+  G  PD IT   LI      G+ + A  + E+M ER  
Sbjct: 267 ----CVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQV 322

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P    YN++I+ L ++      K LL  M  Q + P+   YTTL+D + +S +  DA +
Sbjct: 323 MPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK 382

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
             E + ++A             P  +A N +I  + +     EA   +  M++ G  PD 
Sbjct: 383 IFEFMEEKAC------------PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 627 VTYTTLM 633
            TYTTL+
Sbjct: 431 FTYTTLV 437



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 11/273 (4%)

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G LPD    + L+       RWE AR +  EM V     + +    ++ G    G  +  
Sbjct: 41  GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG 100

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +++     G  P   FYNV+ID + +   +   +     M ++GI P  +T+  +I  
Sbjct: 101 RGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHW 160

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             + G   + E L  EM+ RG  P    YN +IN L +         +L  M      P+
Sbjct: 161 LGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPD 220

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           VVT+ T++  +           C EG   +A+   R     GL+P+ L+   LI+ F   
Sbjct: 221 VVTFNTMIAGF-----------CREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVR 269

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                A  +L  M   G  PD++T   L+  L+
Sbjct: 270 GEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 179/376 (47%), Gaps = 11/376 (2%)

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
           +E D    + +I G    G  + A+  L         P   TY  ++ A        +A 
Sbjct: 156 VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 215

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            + +E+++ G  P    YN ++ G  + G + DA   +  +   G  P+  +Y++++   
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
             A RWE A  ++ EM      PN   ++ +++    +G  +   +VL+++   G  P++
Sbjct: 276 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNS 335

Query: 441 HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
             YN ++  F K   +  AMA  D M+S G  PD +++NTL+    + G  D A EL  +
Sbjct: 336 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 395

Query: 501 MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR 560
           ++++G  P   +YN +I+ L +  + ++   LL  M ++GL P+++TY+T+     +  R
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 455

Query: 561 FDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN 620
            +DAI            AF  ++  G++P+ +  N++I    + +    A  +  YM  N
Sbjct: 456 IEDAIR-----------AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 504

Query: 621 GLKPDVVTYTTLMKAL 636
           G  P+  TYT L++ L
Sbjct: 505 GCMPNESTYTILIEGL 520



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 180/405 (44%), Gaps = 36/405 (8%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
            D +    + G+  +A+R +G A+     P   T AA+I  LS SGRT EA  V      
Sbjct: 71  GDRLRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVL----- 121

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           +   P   AYNA++ GY   G +  A    +E     V  D +T   LI      GR  +
Sbjct: 122 AACGPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTAN 178

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  VL EM      P+   Y+ +L     R  +++  ++L EM+  G  PD   YNV+++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              +   +  A+     + S G EP+T+++N ++       R++ AEEL  EM ++G  P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 298

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE-- 566
              T+N++I+ L  +   E    +L  +   G  PN ++Y  L+  + +  + D A+   
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 567 ----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
                                 C  G  D AV     ++  G  P  ++ N++I+   + 
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            +  EA  +L  M   GL+PD++TY+T+   L R D+      ++
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 39/390 (10%)

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           R+R  P  +TY  L+ A  +    ++A+ L+ +MR  G   D + Y++V+          
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN--------- 238

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
                                       G  + G    A+ FL      G  P T +Y  
Sbjct: 239 ----------------------------GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 270

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           V+  L  + R  +AE +  E+ + G  P    +N L+    + G ++ A  V+ ++ + G
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             P+  +Y+ L+ A+    + + A   L  M      P+   Y+ +L      GE     
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L ++K  G  P    YN +ID   K      A+   + M+S+G++PD IT++T+    
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
            +  R + A   F ++Q+ G  P T  YN +I  L ++        L   M   G +PN 
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 510

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
            TYT L++     G   +A + L+ L  + 
Sbjct: 511 STYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 175/418 (41%), Gaps = 30/418 (7%)

Query: 76  SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKN 135
           ++++  Y    L+  L       +A+ALA     L R         R VP  + +++L  
Sbjct: 155 AVERDAYTCDTLIRGLC--GRGRTANALAVLDEMLRR---------RCVPDVVTYTILLE 203

Query: 136 LCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQR 190
                S    A  ++  ++    C    + Y+++++ + +  ++ +A      L S    
Sbjct: 204 ATCKRSGYKQAMKLLDEMRDKG-CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 262

Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-- 248
              ++YN ++      +  E A  LM +M Q G   + + ++++I  L R   ++ +L  
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 322

Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           L+++ K   C    L     N ++  F K     KAM FL +    G  P   +Y  ++T
Sbjct: 323 LEQIPK-YGCSPNSLS---YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLT 378

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
           AL  SG    A  +  +LK+ G  P   +YN ++ G  K G  K+A  +++EM   G+ P
Sbjct: 379 ALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP 438

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D  TYS +        R E A     +++    +PN+ +Y+ I+ G   R E      + 
Sbjct: 439 DIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 498

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
             M  +G  P+   Y ++I+       +  A    D + S G E        L+D H 
Sbjct: 499 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEE-------ILLDVHL 549


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 215/497 (43%), Gaps = 29/497 (5%)

Query: 166 YSILIHALGRSEKL--YEAFLLSQRQR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y  +IH LGR   L   E+ L   ++R L+P    YN +I A  +     +AL ++++M 
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMV 408

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
              +  D + ++ +I +  R   ++ +L  KL +E    ++E +      +I GF   G+
Sbjct: 409 ASRFDPDVVTFNTLIAAFCREGDVEEAL--KLLREAIRRELEPNQLSYTPLIHGFCVRGE 466

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A   L    G G +P   T  A+I  L  SG+  EA  V E++ E  + P    YN 
Sbjct: 467 VMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNV 526

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G  K   L  A+ ++ EM    V PD+  Y+ LID +  + +   AR + + ME   
Sbjct: 527 LISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKG 586

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              +   Y+ ++ GY   G        +  M+  G  PD   Y  +ID + K   +  A+
Sbjct: 587 GYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAAL 646

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                M+    +P+ +T+ +LI  +   G  D AE LF  MQ  G FP    Y ++I  L
Sbjct: 647 RFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL-------SD 573
            ++++         +M      PN  T   LV         +    C  G+       +D
Sbjct: 707 FKKDKAIQAAAYFEHMLLNHCSPNDATMHYLV---------NGLTNCRYGMINSNCSDTD 757

Query: 574 QA------VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           QA      ++ F+ + +DGL P   A N++I +        +A  + + M   G  PD V
Sbjct: 758 QAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPV 817

Query: 628 TYTTLMKALIRVDKFHK 644
           T+ +L+     V K  K
Sbjct: 818 TFLSLLYGFSSVGKSGK 834



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 172/408 (42%), Gaps = 46/408 (11%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I G+ + GD  + +  LG  +  G+ P   TY A+I  L       + E++  E+KE
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P  + YN ++    K      A  V+++M  S   PD  T++ LI A+   G  E 
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG------------- 435
           A  +L+E      +PN   Y+ ++ G+  RGE      +L EM   G             
Sbjct: 435 ALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIH 494

Query: 436 ----------------------VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
                                 V PD + YNV+I    K   L  A      ML + ++P
Sbjct: 495 GLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D   + TLID   +  +   A ++FE M+E+G +     YN MI    +     +    +
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614

Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
            +MR  G +P+  TYTTL+D Y + G    A   L  L D        M     KP+ + 
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAA---LRFLCD--------MMKRRCKPNIVT 663

Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
             SLI  +        A  +   M+  GL P+VV YT L+ +L + DK
Sbjct: 664 YASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDK 711



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 147/387 (37%), Gaps = 59/387 (15%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   GR  E   + E     G  P    YN L+ GY + G +     ++ EME  G
Sbjct: 282 MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKG 341

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           ++P   TY  +I              +L EM+     PN  IY+ ++          +  
Sbjct: 342 IMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQAL 401

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGK-------------------------YNCLHHA- 459
            VL +M +S  +PD   +N +I  F +                         Y  L H  
Sbjct: 402 AVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF 461

Query: 460 ------MAAFD---RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                 M A D    M+  G  PD +T   LI      G+ D A  + E+M ER   P  
Sbjct: 462 CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDA 521

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---- 566
             YN++I+ L ++      K LL  M  Q + P+   YTTL+D + +S +  DA +    
Sbjct: 522 NIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEF 581

Query: 567 --------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
                               C  G+ ++AV     MR  G  P      +LI+ + +   
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLM 633
              A   L  M +   KP++VTY +L+
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLI 668



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 11/270 (4%)

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           D+++  +++      GR E  R +++        P +  Y+ ++ GY  RG+  R   +L
Sbjct: 275 DDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLL 334

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
            EM+  G+ P    Y  +I   G+ + L    +    M   G+ P+   +NT+I    KC
Sbjct: 335 GEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKC 394

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
               +A  +  +M    + P   T+N +I     +   E+  +LL     + L PN ++Y
Sbjct: 395 RSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSY 454

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           T L+  +           C+ G    A +    M   G  P  + L +LI+      +  
Sbjct: 455 TPLIHGF-----------CVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVD 503

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           EA  V + M E  + PD   Y  L+  L +
Sbjct: 504 EALMVREKMAERQVMPDANIYNVLISGLCK 533


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 240/565 (42%), Gaps = 73/565 (12%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ--- 187
           S +  LC     IDLAYA++  + +  +     + +++++  L +  +L E   L +   
Sbjct: 265 SFIIGLCECGK-IDLAYAILQEIIREKV-QVEAIAFNVVMDGLCKEMRLEEVEKLLENKV 322

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
           RQ LTP    Y+ LI +  +  +L K L+    M   G   +    S ++Q  T+     
Sbjct: 323 RQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGM-- 380

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
           +S + + +++     + +DG L N  +  + K G+  +A++ LG    VGLSP    Y  
Sbjct: 381 ASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTC 440

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           +I      G    A   FEE+ ++ +KP    YN L  G  K G + +   ++  ME  G
Sbjct: 441 LIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRG 500

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + P+  TY ++ID +        A ++   +E         +YS ++ GY  +G W    
Sbjct: 501 LQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKG-WTDNA 559

Query: 426 QVL------------------------KEMKSSGVE------------PDTHFYNVMIDT 449
            VL                        ++  S G              PD   Y+ +I  
Sbjct: 560 YVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISA 619

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
           + +   + +A   F  M+  G+  D I +  L++ + K G    A ELF +M   G  P 
Sbjct: 620 YCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPD 679

Query: 510 TTTYNIMIN-LLGE--QERWEDV-------------KRLLGNMRAQGLLPNVVTYTTLVD 553
              Y ++++  L E  Q RW+ +              RLL +M+   + P+V  YT L+D
Sbjct: 680 IIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLID 739

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
             GQ         C     +QA   F  M   GL P + A  +LIN +      A+A  +
Sbjct: 740 --GQ---------CKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDL 788

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
            Q M + G+KPDV+T++ L + ++R
Sbjct: 789 FQEMVDKGIKPDVLTFSVLNRRVLR 813



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 205/483 (42%), Gaps = 34/483 (7%)

Query: 184 LLSQRQRLTPLTY------NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
           L+ Q +R    +Y      N LI+AC    D    + L  ++ + G        +++++ 
Sbjct: 140 LMDQLKRTCTTSYPLLFATNCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKF 199

Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
              +   DS ++   Y E++  ++ LD   L  +     +   A KA +       +G+ 
Sbjct: 200 AAES--CDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVK 257

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +++ I  L   G+   A A+ +E+    ++    A+N ++ G  K   L++ E +
Sbjct: 258 PDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKL 317

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYR 416
           +    R G+ PD + YS LI +Y   G         + M VSH  + N  I S +L  + 
Sbjct: 318 LENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAM-VSHGLEANCHIMSYLLQCFT 376

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G   +  +  ++ + SG+  D   YN+ +D + K   +  A+     M++ G+ PD I
Sbjct: 377 KLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRI 436

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
            +  LI  +   G    A + FEEM +    P   TYNI+ + L ++    +V  L+G+M
Sbjct: 437 HYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHM 496

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDA--------------IECL----------EGLS 572
             +GL PN +TY  ++D + +     +A              IE L          +G +
Sbjct: 497 EDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWT 556

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           D A   F  +   G      + + LI+    D     A  V   M E    PD+++Y+ L
Sbjct: 557 DNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKL 616

Query: 633 MKA 635
           + A
Sbjct: 617 ISA 619



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 208/506 (41%), Gaps = 77/506 (15%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           +KA  +  +M + G   D   +S  I  L    KID  L   + +EI  +K++++    N
Sbjct: 242 DKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKID--LAYAILQEIIREKVQVEAIAFN 299

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI------------ 317
            V+ G  K     +  + L      GL+P    Y+ +I +    G  +            
Sbjct: 300 VVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSH 359

Query: 318 -----------------------EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
                                  +    F++ ++SGL      YN  +  Y K+G + +A
Sbjct: 360 GLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEA 419

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             ++ EM   G+ PD   Y+ LI  Y   G  ++AR   +EM  ++ KP+   Y+ + +G
Sbjct: 420 VKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASG 479

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
              RG     F ++  M+  G++P++  Y V+ID F + + L  A   F+ +  +GI+  
Sbjct: 480 LSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNI 539

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            + +++++  +   G  D A  LF  + ++G      + + +I+ L      +    +  
Sbjct: 540 EVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCS 599

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE-----------------CLEG 570
            M  +  +P++++Y+ L+  Y Q+G        F D ++                 C  G
Sbjct: 600 TMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIG 659

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINA------------FGEDQRD----AEAFAVL 614
           L  +A   F  M + G+KP  +A   L++                D+R     A+   +L
Sbjct: 660 LMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLL 719

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVD 640
             MKE  ++PDV  YT L+    + D
Sbjct: 720 SSMKEMEIEPDVPCYTVLIDGQCKSD 745



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 162/386 (41%), Gaps = 14/386 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N +I       DA   +   G    +G+ P   T   ++   + S  +    + ++E+K 
Sbjct: 159 NCLITACTTCCDARDTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKF 218

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             L     +   + +   +      A  V  EM   GV PD H +S  I      G+ + 
Sbjct: 219 FRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDL 278

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L+E+     +  +  ++ ++ G       +   ++L+     G+ PD + Y+ +I 
Sbjct: 279 AYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIR 338

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           ++ K   L   +  +  M+S G+E +    + L+ C  K G   +  E F++ ++ G   
Sbjct: 339 SYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHI 398

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               YNI ++   +    ++  +LLG M   GL P+ + YT L+  Y           CL
Sbjct: 399 DGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGY-----------CL 447

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           +G    A  AF  M    +KP  +  N L +   +     E F ++ +M++ GL+P+ +T
Sbjct: 448 KGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLT 507

Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNI 654
           Y  ++    R D   +   + + FNI
Sbjct: 508 YGVVIDGFCRGDNLSE---AEVLFNI 530


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 177/382 (46%), Gaps = 11/382 (2%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           K+ LD      +I G  +AG+  K+   L      G SP    Y  +I      G   +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
           + +F E+ + GL    + Y  L+ G  K G  K    +  +M+  GV P+ +TY+ +++ 
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
               GR + A  V  EM       N   Y+ ++ G     +     +V+ +MKS G+ P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN +ID F     L  A++    + S G+ P  +T+N L+    + G    A ++ +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           EM+ERG  P   TY I+I+     +  E   +L  +M   GL+P+V TY+ L+  +    
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF---- 453

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C++G  ++A   F+ M     +P+ +  N++I  + ++     A  +L+ M+E
Sbjct: 454 -------CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506

Query: 620 NGLKPDVVTYTTLMKALIRVDK 641
             L P+V +Y  +++ L +  K
Sbjct: 507 KELAPNVASYRYMIEVLCKERK 528



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 8/356 (2%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
           P  + ++ L + C     I+ A  +   + K  L  + E  Y++LI+ L   G  ++ +E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL-VANERTYTVLINGLFKNGVKKQGFE 254

Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
            +   Q   + P   TYN +++   ++   + A  +  +MR+ G  C+ + Y+ +I  L 
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           R  K++ +   K+  +++ D I  +    N +I GF   G   KA+      +  GLSP 
Sbjct: 315 REMKLNEA--NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +++     G T  A  + +E++E G+KP    Y  L+  + +   ++ A  +  
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
            ME  G++PD HTYS+LI  +   G+   A  + K M   + +PN  IY+ ++ GY   G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
              R  ++LKEM+   + P+   Y  MI+   K      A    ++M+  GI+P T
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 5/387 (1%)

Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           YS+ +L      A G  EK ++  +       +P  + Y  LI  C +  ++EKA +L  
Sbjct: 164 YSFGILIKGCCEA-GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M + G   +   Y+++I  L +          ++Y++++ D +  +    N V+    K
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGF--EMYEKMQEDGVFPNLYTYNCVMNQLCK 280

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G    A +     +  G+S    TY  +I  L    +  EA  V +++K  G+ P    
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN L+ G+  +G L  A  +  +++  G+ P   TY++L+  +   G    A  ++KEME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KP+   Y+ ++  +      ++  Q+   M+  G+ PD H Y+V+I  F     ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  M+ +  EP+ + +NT+I  + K G   RA +L +EM+E+   P   +Y  MI
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPN 544
            +L ++ + ++ +RL+  M   G+ P+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 12/342 (3%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  +I +   S     + + F E+ ++G  P +  +N LL   V            +E  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           +S V+ D +++ +LI     AG  E +  +L E+      PN  IY+ ++ G   +GE +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +   +  EM   G+  +   Y V+I+   K          +++M  +G+ P+  T+N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           +   K GR   A ++F+EM+ERG      TYN +I  L  + +  +  +++  M++ G+ 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN++TY TL+D +           C  G   +A++  R +++ GL PS +  N L++ F 
Sbjct: 336 PNLITYNTLIDGF-----------CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
                + A  +++ M+E G+KP  VTYT L+    R D   K
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 7/358 (1%)

Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
           ++Y+ LI      G  EK  + F    +  L     TY  LI+   +N   ++   +  K
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M++DG   +   Y+ V+  L +  +   +   +++ E+    +  +    N +I G  + 
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAF--QVFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              ++A + +   +  G++P   TY  +I      G+  +A ++  +LK  GL P    Y
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N L+ G+ + G    A  +V EME  G+ P + TY++LID +A +   E A  +   ME 
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P+   YS ++ G+  +G+     ++ K M     EP+   YN MI  + K    + 
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
           A+     M  + + P+  ++  +I+   K  +   AE L E+M + G  P T+  +++
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 12/275 (4%)

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y ++I++Y  +     +     EM  +   P S  ++ +L        + + +    E K
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
           S  V  D + + ++I    +   +  +      +   G  P+ + + TLID   K G  +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A++LF EM + G      TY ++IN L +    +    +   M+  G+ PN+ TY  ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
           +   + GR  DA +            F  MR  G+  + +  N+LI     + +  EA  
Sbjct: 276 NQLCKDGRTKDAFQ-----------VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           V+  MK +G+ P+++TY TL+     V K  K  S
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 9/288 (3%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           ++ ++  LC    + D A+ V   +++  +  +  + Y+ LI  L R  KL EA  +  +
Sbjct: 271 YNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNI-VTYNTLIGGLCREMKLNEANKVVDQ 328

Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +   + P  +TYN LI        L KAL+L   ++  G     + Y++++    R  K
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR--K 386

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D+S   K+ KE+E   I+        +I  FA++ +  KA++     + +GL P   TY
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           + +I      G+  EA  +F+ + E   +P    YN ++ GY K G    A  ++ EME 
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
             + P+  +Y  +I+      + + A  ++++M  S   P++ I S I
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 14/252 (5%)

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L E E S  K    +Y  I+  Y        +     EM  +G  P ++ +N ++     
Sbjct: 84  LTESETSKTKFR--LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG 141

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            +  +   + F+   S+ +  D  ++  LI    + G  +++ +L  E+ E G+ P    
Sbjct: 142 SSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVI 200

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           Y  +I+   ++   E  K L   M   GL+ N  TYT L++     G F +      G+ 
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN-----GLFKN------GVK 249

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            Q    +  M+ DG+ P+    N ++N   +D R  +AF V   M+E G+  ++VTY TL
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309

Query: 633 MKALIRVDKFHK 644
           +  L R  K ++
Sbjct: 310 IGGLCREMKLNE 321



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 12/208 (5%)

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y V+I+++ +   L+ +++ F+ M+  G  P +  +N L+        +++    F E 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           + +       ++ I+I    E    E    LL  +   G  PNVV YTTL+D        
Sbjct: 156 KSKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC------ 208

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
                C +G  ++A + F  M   GL  +      LIN   ++    + F + + M+E+G
Sbjct: 209 -----CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + P++ TY  +M  L +  +    F  +
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVF 291


>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
          Length = 635

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 214/439 (48%), Gaps = 38/439 (8%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++  +++  + + G+    + Y+ ++ +LT     DS  +  +  ++E + +E D    N
Sbjct: 89  QEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDS--IHSIISQVEENGMEPDSIFFN 146

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KE 328
            VI  F+++G+  +AM++    +  G  P T+T+  +I     +G   E++ + Z + ++
Sbjct: 147 AVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQD 206

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             ++P  + YN L++ +     +  A  VV +M  SG+ PD  TY+ +  AYA  G    
Sbjct: 207 ENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQ 266

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++ EM+ S+ +PN      I+ GY   G+ +   Q +  MK  G++P+   +N +I 
Sbjct: 267 AEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIK 326

Query: 449 TFGKYNCLHHAMAAFDR---------MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            F         + A DR         M   G++PD IT++T+++     G  D+  E+F+
Sbjct: 327 GF---------IDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFD 377

Query: 500 EMQERGYFPCTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +M +    P    Y+I+       GE E+ E++   L  M   G  PNVV +TT+++ + 
Sbjct: 378 DMVKARIQPDAHVYSILAKGYVRAGEPEKAEEI---LNAMIKSGFHPNVVMFTTIINGWC 434

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
            +GR + AI+  E + +            G+ P+     +LI  +GE ++  ++  VLQ 
Sbjct: 435 SAGRMEYAIKIFEKMCEC-----------GIAPNLKTFETLIWGYGEARQPWKSEEVLQI 483

Query: 617 MKENGLKPDVVTYTTLMKA 635
           M+E  ++P+  T   + +A
Sbjct: 484 MEEFNVQPEKTTLLLVAEA 502



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 176/366 (48%), Gaps = 3/366 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  L++A       +   +++S++ ++G   D I ++ VI + + +  +  ++  K +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAM--KYF 165

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSN 312
            +++    +      N +I G+  AG+  ++ + L  M+Q   + P   TY  ++ A  N
Sbjct: 166 WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCN 225

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
               ++A  V  ++  SGL+P    YN +   Y + G    AE ++ EM+ S V P+E T
Sbjct: 226 KXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
             ++I  Y   G+ + A   +  M+    +PN  +++ ++ G+ D  +     +VL  M+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             GV+PD   ++ +++ +     +      FD M+   I+PD   ++ L   + + G  +
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AEE+   M + G+ P    +  +IN      R E   ++   M   G+ PN+ T+ TL+
Sbjct: 406 KAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465

Query: 553 DIYGQS 558
             YG++
Sbjct: 466 WGYGEA 471



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 162/369 (43%), Gaps = 47/369 (12%)

Query: 152 WLQKHNLCYSYELLYSILIHALG------RSEKLYEAFLLSQRQRLTP--LTYNALISAC 203
           W  K +        ++ LI   G       S+KL Z  L+SQ + + P   TYN L+ A 
Sbjct: 166 WKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZ--LMSQDENVRPNLRTYNVLVRAW 223

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
               ++ KA N++ KM   G   D + Y                                
Sbjct: 224 CNKXNIMKAWNVVYKMVASGLQPDAVTY-------------------------------- 251

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
                N +   +A+ G+AS+A   +   Q   + P   T   +I      G+  EA    
Sbjct: 252 -----NTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFV 306

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
             +K+ GL+P    +N+L+KG++          V++ ME  GV PD  T+S +++A++ A
Sbjct: 307 YRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAA 366

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
           G  +  R +  +M  +  +P++ +YS +  GY   GE ++  ++L  M  SG  P+   +
Sbjct: 367 GFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMF 426

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
             +I+ +     + +A+  F++M   GI P+  T+ TLI  + +  +  ++EE+ + M+E
Sbjct: 427 TTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEE 486

Query: 504 RGYFPCTTT 512
               P  TT
Sbjct: 487 FNVQPEKTT 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           GR  E +++ + + E G KP    Y  LL       +      ++S++E +G+ PD   +
Sbjct: 86  GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-K 432
           + +I+A++ +G  + A     +M+ S +KP +  ++ ++ GY   GE + + ++L+ M +
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQ 205

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P+   YNV++  +     +  A     +M++ G++PD +T+NT+   + + G   
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +AE +  EMQ     P   T  I+I    ++ + ++  + +  M+  GL PN+V + +L+
Sbjct: 266 QAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLI 325

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
                   F DA++      D       +M   G+KP  +  ++++NA+       +   
Sbjct: 326 K------GFIDAVD-----RDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCRE 374

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +   M +  ++PD   Y+ L K  +R  +  K
Sbjct: 375 IFDDMVKARIQPDAHVYSILAKGYVRAGEPEK 406



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 28/299 (9%)

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           L++     GR +  + +L  +     KP+   Y+ +LA    +  +     ++ +++ +G
Sbjct: 78  LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           +EPD+ F+N +I+ F +   +  AM  F +M   G +P T T+NTLI  +   G  + ++
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197

Query: 496 ELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +L Z M Q+    P   TYN+++     +        ++  M A GL P+ VTY T+   
Sbjct: 198 KLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATA 257

Query: 555 YGQSGRFDDA----IE--------------------CLEGLSDQAVNAFRVMRTDGLKPS 590
           Y Q+G    A    +E                    C EG   +A+     M+  GL+P+
Sbjct: 258 YAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPN 317

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
            +  NSLI  F +         VL  M+E G+KPDV+T++T+M A      +DK  ++F
Sbjct: 318 LVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 223/501 (44%), Gaps = 52/501 (10%)

Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
           +R+ P   TYN ++ +     DL++A+ L   +R  G   D I YS ++    + N++D+
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDN 212

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAA 305
           +L   L  E+   +++ D    N ++ G  + G+  KAMR    + +  G SP  ATY  
Sbjct: 213 ALY--LLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNV 270

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G   EA  V+E +  +  +P    Y  ++ G  +   +  A  V SEM ++G
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK----------------------- 402
           ++PD   Y+ L+  + +AGR   A      M VS  +                       
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATD 390

Query: 403 ------------PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
                       P+   +S ++ G  ++G   ++ Q+L+E ++SG E D   Y+ MI   
Sbjct: 391 LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGL 450

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K   L  A+  ++++  +  +P++  +N LI+   +  ++  A  ++ +M E    P T
Sbjct: 451 CKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTT 510

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
            TYN +I+ L + E++ +  R    M  +G + +V TY +L+    +  + D A+     
Sbjct: 511 ITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQ 570

Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE-NGLKPDVVTY 629
           + D+ +    VM            N LI+      +  EA  +L  MKE N   P+VVTY
Sbjct: 571 ILDKGLQTDVVMH-----------NILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTY 619

Query: 630 TTLMKALIRVDKFHKVFSSYL 650
            TLM        F K  S ++
Sbjct: 620 NTLMDGFYETGCFDKAASLWM 640



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 190/438 (43%), Gaps = 67/438 (15%)

Query: 271 VIVGFAKA--GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           V+  F++A   DA+ A  F  +   +G +P   ++ A++ A   + R  +A+A F  L  
Sbjct: 90  VLSAFSRALMPDAALAA-FRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 329 SG----LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
                 + P  + YN +L+     G L  A  +   +   G+ PD  TYS L+  +    
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFY 443
           R ++A  +L EM     +P++  Y+ +L G    GE+++  +V +++ +  G  P+   Y
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           NVM+D   K      A   ++RM++   +PD IT+ T+I    +    D A  ++ EM +
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 504 RGYFPCTTTYNIMI------NLLGEQERWEDVKRLLG-------NMRAQGLL-------- 542
            G  P    YN ++        +GE  ++ D   + G       N+  +GL         
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388

Query: 543 --------------PNVVTYTTLVDIYGQSGRFDDAIE---------------------- 566
                         P++VT++T++    + G  + +++                      
Sbjct: 389 TDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMIS 448

Query: 567 --CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
             C +G  D AV  +  +  D  KP++   N+LIN F +  + ++A  V   M EN   P
Sbjct: 449 GLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSP 508

Query: 625 DVVTYTTLMKALIRVDKF 642
             +TY TL+  L + +K+
Sbjct: 509 TTITYNTLIHGLCKAEKY 526



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/536 (21%), Positives = 212/536 (39%), Gaps = 116/536 (21%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
           ++ +L++LC     +D A  +   L+   L     + YS L+    ++ +L  A  L   
Sbjct: 162 YNIMLRSLCV-RGDLDRAVTLFDSLRCRGLAPD-RITYSTLMSGFVKNNRLDNALYLLDE 219

Query: 186 --SQRQRLTPLTYNALISACARNDDLEKAL-------------------NLM-------- 216
             S   +   + YNAL+  C RN + EKA+                   N+M        
Sbjct: 220 MPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLG 279

Query: 217 ---------SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
                     +M  + +  D I Y  +I  L R+  +DS+   ++Y E+    +  D  +
Sbjct: 280 MFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA--ARVYSEMIKTGLVPDVVI 337

Query: 268 LNDVIVGFAKAGDASKAMRFLG---------------MAQGV------------------ 294
            N ++ GF  AG   +A +F                 M +G+                  
Sbjct: 338 YNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEK 397

Query: 295 --GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
              LSP   T++ +I  L   G   ++  + EE + SG +    +Y++++ G  K G L 
Sbjct: 398 DDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLD 457

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           DA  +  ++      P+ H Y+ LI+ +  A ++  A  V  +M  +   P +  Y+ ++
Sbjct: 458 DAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLI 517

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G     ++    +  +EM   G   D + Y  +I    +   +  A+A ++++L +G++
Sbjct: 518 HGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQ 577

Query: 473 ------------------------------------PDTITWNTLIDCHFKCGRYDRAEE 496
                                               P+ +T+NTL+D  ++ G +D+A  
Sbjct: 578 TDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAAS 637

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           L+  + E G  P   +YN  I  L    R  +  +LL  M A G++P  +T+  LV
Sbjct: 638 LWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 155/331 (46%), Gaps = 9/331 (2%)

Query: 166 YSILIHAL---GRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           Y+I++  L   G  +K  + + LL +   L+P  +T++ +I          K+L ++ + 
Sbjct: 372 YNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEA 431

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G   D  +YS +I  L +  ++D ++  KLY++I  D  + +  + N +I GF +A 
Sbjct: 432 RTSGKELDEFSYSSMISGLCKDGRLDDAV--KLYEKISMDSFKPNSHIYNALINGFCQAS 489

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
             S A+R          SP T TY  +I  L  + + +EA     E+ E G       Y 
Sbjct: 490 KFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYG 549

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-EV 398
           +L++G  +   +  A  + +++   G+  D   +++LI    +AG+ + A  +L EM E 
Sbjct: 550 SLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK 609

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           ++  PN   Y+ ++ G+ + G + +   +   +  +G+ PD   YN  I      N    
Sbjct: 610 NNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPE 669

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
            +   + ML+ GI P  ITWN L+    K G
Sbjct: 670 GVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 51/210 (24%)

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
           V++  F +      A+AAF R+ S  G  P   + N L+D   +  R+  A+  F  +  
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 504 ----RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
               R   P   TYNIM+  L                                       
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSL--------------------------------------- 169

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                  C+ G  D+AV  F  +R  GL P  +  ++L++ F ++ R   A  +L  M  
Sbjct: 170 -------CVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPS 222

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             ++PD V Y  L+    R  +F K    +
Sbjct: 223 YEVQPDAVCYNALLGGCFRNGEFEKAMRVW 252


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 205/456 (44%), Gaps = 20/456 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
           +  L+++ A+       L+L ++M   G   D    +++I S     ++    S+L KL 
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           K + C     D    N +I G    G   +A+       G G  P   TY  ++  L   
Sbjct: 213 K-LGCQP---DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 268

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G T  A  +   + +   +P   AYN ++    K   + +A  + SEM   G+ PD  TY
Sbjct: 269 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 328

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI A  N   W+    +L EM  S   PN  ++S ++      G       V+  M  
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 388

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GVEPD   Y  ++D     + +  A+  FD M+ +G  P+  ++N LI+ + +  R D+
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  L E+M  +G    T TYN +I+ L    R +    L   M A G +P++VTY  L+D
Sbjct: 449 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 508

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++    +A+  L+ +    ++A        +   N+A++ +  A GE +   + F+ 
Sbjct: 509 YLCKNHHLAEAMVLLKAIEGSNLDA-------DILVYNIAIDGMCRA-GELEAARDLFSN 560

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVF 646
           L      GL+PDV TY  ++  L +   +D+ +K+F
Sbjct: 561 LS---SKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 593



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 118/540 (21%), Positives = 226/540 (41%), Gaps = 33/540 (6%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLW--HSLLKNLCSSN 140
           DFT LL  +++  +  +  +L++   S              +P  ++  + L+ + C   
Sbjct: 152 DFTKLLTSIAKMKHYSTVLSLSTQMDSF------------GIPPDVYTLNILINSFCHLR 199

Query: 141 SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LT 195
             +  A++V++ L K   C      ++ LI  L    K+ EA  L  +   +   P  +T
Sbjct: 200 R-LGYAFSVLAKLLKLG-CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVT 257

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           Y  L++   +  +   A+ L+  M Q     + I Y+ +I SL +  ++  +    L+ E
Sbjct: 258 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF--NLFSE 315

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +    I  D    N +I       +       L       + P    ++ V+ AL   G 
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 375

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
              A  V + + + G++P    Y AL+ G+     + +A  V   M   G +P+  +Y++
Sbjct: 376 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 435

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           LI+ Y    R + A  +L++M +     ++  Y+ ++ G    G  Q    +  EM +SG
Sbjct: 436 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 495

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
             PD   Y +++D   K + L  AM     +    ++ D + +N  ID   + G  + A 
Sbjct: 496 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 555

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           +LF  +  +G  P   TYNIMI+ L ++   ++  +L   M   G   +   Y T++  +
Sbjct: 556 DLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGF 615

Query: 556 GQSGRFDDAIECLEGLSDQAVNA--------FRVMRTDGLKPSNLALNSLINAFGEDQRD 607
            +S     A + L+ +  +  +A          ++  DGL  S   L   +   GE+ R+
Sbjct: 616 LRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLR--LRGVGEEDRE 673



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 31/347 (8%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P T  +  LL    KM +      + ++M+  G+ PD +T ++LI+++ +  R   A  V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L ++     +P++  ++ ++ G    G+      +  +    G +PD   Y  +++   K
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                 A+     M+ +   P+ I +NT+ID   K  +   A  LF EM  +G  P   T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF---DDAIE--- 566
           YN +I+ L     W+ V  LL  M    ++PNVV ++T+VD   + G      D ++   
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 567 ------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
                             CL    D+AV  F  M   G  P+  + N LIN + + QR  
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK-------FHKVFSS 648
           +A  +L+ M   GL  D VTY TL+  L  V +       FH++ +S
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 494



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
           +N L  A+++F+RML     P T+ +  L+    K   Y     L  +M   G  P   T
Sbjct: 128 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 187

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
            NI+IN      R      +L  +   G  P+  T+ TL+              C+EG  
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGL-----------CVEGKI 236

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            +A++ F     +G +P  +   +L+N   +    + A  +L+ M +   +P+V+ Y T+
Sbjct: 237 GEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 296

Query: 633 MKALIRVDKFHKVFSSY 649
           + +L +  +  + F+ +
Sbjct: 297 IDSLCKDRQVTEAFNLF 313


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 11/330 (3%)

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           ++ L  +G   E     E +   G  P      +L++G+ K+G  + A  ++  +E SG 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           +PD  TY++LI    + GRW  A  +L +M      P+   ++ ++     +G   R   
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           VL++M   G  P++  YN ++  F K   +  A+    +M S G  PD +T+NTL+    
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+ D A EL  ++  +G  P   TYN +I+ L +  + +   +LL  MRA+GL P+++
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY++LV    + G+ D+AI+            F  +   G+KP+ +  N+++    + ++
Sbjct: 331 TYSSLVGGLSREGKVDEAIK-----------FFHDLEVLGVKPNAITYNAIMLGLCKARK 379

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              A   L YM + G KP   +YT L++ L
Sbjct: 380 TDRAIDFLAYMVQRGCKPTEASYTILIEGL 409



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 15/371 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N+ +    + G+  +  RFL      G  P      ++I      G+T +A  + E +++
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
           SG  P    YN L+ G    G   DAE ++++M R G  P   T+++LI+     G    
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  VL++M      PNS  Y+ +L G+    + +R  + L +M S G  PD   YN ++ 
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A+   +++ S+G  P  IT+NT+ID   K G+ D+A +L +EM+ +G  P
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY+ ++  L  + + ++  +   ++   G+ PN +TY  ++    ++ + D AI+ L
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                    A+ V R  G KP+  +   LI     +    EA  +L  +   G    VV 
Sbjct: 388 ---------AYMVQR--GCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG----VVK 432

Query: 629 YTTLMKALIRV 639
            ++  K  +R+
Sbjct: 433 KSSAEKVAVRM 443



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 11/303 (3%)

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N  L   V+ G L++    +  M   G +PD    + LI  +   G+   A  +++ +E 
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S A P+   Y+ +++G    G W    ++L +M   G  P    +N++I+   +   L  
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+   ++M   G  P+++++N L+    K  + +RA E   +M  RG +P   TYN ++ 
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L +  + +    LL  + ++G  P ++TY T++D   + G+           +DQA   
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK-----------TDQAAKL 316

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
              MR  GLKP  +  +SL+     + +  EA      ++  G+KP+ +TY  +M  L +
Sbjct: 317 LDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCK 376

Query: 639 VDK 641
             K
Sbjct: 377 ARK 379



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 159/384 (41%), Gaps = 42/384 (10%)

Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
           N  +S   RN +LE+    +  M   G   D I  + +I+                    
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIR-------------------- 127

Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
                            GF K G   KA R + + +  G  P   TY  +I+ + ++GR 
Sbjct: 128 -----------------GFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRW 170

Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
           ++AE +  ++   G  P    +N L+    + G L  A  V+ +M + G  P+  +Y+ L
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPL 230

Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
           +  +    + E A   L +M      P+   Y+ +L      G+     ++L ++ S G 
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290

Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
            P    YN +ID   K      A    D M ++G++PD IT+++L+    + G+ D A +
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
            F +++  G  P   TYN ++  L +  + +     L  M  +G  P   +YT L++   
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLA 410

Query: 557 QSGRFDDAIE-----CLEGLSDQA 575
             G   +A+E     CL G+  ++
Sbjct: 411 YEGLAKEALELLNELCLRGVVKKS 434



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 6/280 (2%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQK 251
           +TYN LIS          A  L++ M + G     + ++++I  L R   +  ++  L+K
Sbjct: 155 ITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEK 214

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           + K   C    L     N ++ GF K     +A+ +LG     G  P   TY  ++TAL 
Sbjct: 215 MPKH-GCTPNSLS---YNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G+   A  +  +L   G  P    YN ++ G  K+G    A  ++ EM   G+ PD  
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TYS L+   +  G+ + A     ++EV   KPN+  Y+ I+ G     +  R    L  M
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYM 390

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
              G +P    Y ++I+          A+   + +   G+
Sbjct: 391 VQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P+ +  ++L N       +  A  V+  + KH  C    L Y+ L+H   + +K+  A  
Sbjct: 187 PSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG-CTPNSLSYNPLLHGFCKEKKMERAIE 245

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               + S+      +TYN L++A  ++  ++ A+ L++++   G     I Y+ VI  L+
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +  K D +   KL  E+    ++ D    + ++ G ++ G   +A++F    + +G+ P 
Sbjct: 306 KVGKTDQA--AKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPN 363

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY A++  L  + +T  A      + + G KP   +Y  L++G    G  K+A  +++
Sbjct: 364 AITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLN 423

Query: 360 EMERSGVL 367
           E+   GV+
Sbjct: 424 ELCLRGVV 431



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G  +      E M  RG  P       +I    +  +     R++  +   G +P+V+TY
Sbjct: 98  GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITY 157

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
             L+     +GR+ DA + L  +  +           G  PS +  N LIN         
Sbjct: 158 NVLISGMCSTGRWMDAEKLLADMVRR-----------GCSPSVVTFNILINFLCRKGLLG 206

Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            A  VL+ M ++G  P+ ++Y  L+    +  K  +  
Sbjct: 207 RAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 134/566 (23%), Positives = 258/566 (45%), Gaps = 43/566 (7%)

Query: 119 ESYRAVPAPLWHSLLKNLCSSNSSID---------LAYAVVSWLQKHNLCYSYELLYSIL 169
           E+Y+ +   +   +L +  S N+ ID          A A+V  + + NL     + ++IL
Sbjct: 179 EAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNL-----ITHTIL 233

Query: 170 IHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCD 227
           I +      + EA+         P  +T++++I+   ++  + +   L+ +M + G + +
Sbjct: 234 ISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPN 293

Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
            + Y+ ++ SL +      +L   LY ++    I +D  +   ++ G  KAGD  +A + 
Sbjct: 294 HVTYTTLVDSLFKAKDYRHAL--ALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKT 351

Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
             M       P   TY A++  L  +G    AE +  ++ E  + P    Y++++ GYVK
Sbjct: 352 FKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVK 411

Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
            G L++A  ++ +ME   V+P+  TY  +ID    AG+ E A  + KEM +   + N++I
Sbjct: 412 KGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYI 471

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
              ++   +  G  +    ++K+M S GV  D   Y  +ID F K      A++  + M 
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQ 531

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            + +  D +++N LI    K G+   A+  ++ M+E+G  P   T+NIM+N   +Q  +E
Sbjct: 532 EKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFE 590

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL---------------- 571
            + +L   M++ G+ P+++    +V +  + G+  +AI+ L+ +                
Sbjct: 591 GILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFL 650

Query: 572 --------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
                   +D        + + G+K S    N+LI    +     +A  V++ M+  G  
Sbjct: 651 DMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFV 710

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
           PD VT+  LM          K  S+Y
Sbjct: 711 PDTVTFNALMHGYFVGSHVGKALSTY 736



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 201/444 (45%), Gaps = 24/444 (5%)

Query: 196 YNALISACARNDDLEKALNLM-SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +N+LI     N  +   ++L+ SKM   G   D    +++I SL +  ++ S  +  L  
Sbjct: 96  WNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQL-SFAISLLRN 154

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +    I +D    N VI G  + G A +A +FL     +G+ P T ++  +I      G
Sbjct: 155 RV----ISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVG 210

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A+A+ +E+ E  L   T     L+  Y  +  +++A     +M  SG  PD  T+S
Sbjct: 211 NFARAKALVDEISELNLITHT----ILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFS 263

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I+     G+     ++L+EME     PN   Y+ ++       +++    +  +M   
Sbjct: 264 SIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVR 323

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  D   Y V++    K   L  A   F  +L +   P+ +T+  L+D   K G    A
Sbjct: 324 GIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSA 383

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           E +  +M E+  FP   TY+ MIN   ++   E+   L+  M  Q ++PN  TY T++D 
Sbjct: 384 EFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDG 443

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
             ++G+ + A E    +S +       MR  G++ +N  L++L+N      R  E   ++
Sbjct: 444 LFKAGKQEVASE----MSKE-------MRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492

Query: 615 QYMKENGLKPDVVTYTTLMKALIR 638
           + M   G+  D + YT+L+    +
Sbjct: 493 KDMVSKGVTLDHINYTSLIDVFFK 516



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 214/482 (44%), Gaps = 19/482 (3%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQ--RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+  L ++  L  A F+++Q   + + P  +TY+++I+   +   LE+A++LM KM 
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKME 426

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
                 +   Y  VI  L +  K    +  ++ KE+    +E +  +L+ ++    + G 
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGK--QEVASEMSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +    +      G++     Y ++I      G    A +  EE++E  +     +YN 
Sbjct: 485 IKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNV 544

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G +K G +  A++    M   G+ PD  T+++++++    G +E    +  +M+   
Sbjct: 545 LISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCG 603

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KP+  I + ++    ++G+ +    +L +M    + P+   Y + +D   K+       
Sbjct: 604 IKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIF 663

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              + +LS GI+     +NTLI    K G   +A  + E+M+ RG+ P T T+N +++  
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGY 723

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
                          M   G+ PNV TY T+  I G S    DA     GL  +      
Sbjct: 724 FVGSHVGKALSTYSMMMEAGISPNVATYNTI--IRGLS----DA-----GLIKEVEKWLS 772

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
            M++ G++P +   N+LI+   +     E+  +   M  +GL P   TY  L+    +V 
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVG 832

Query: 641 KF 642
           K 
Sbjct: 833 KM 834



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 51/406 (12%)

Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
           ++S+   L  + Y +LI    +  D E AL+   +M++     D ++Y+++I  L +  K
Sbjct: 495 MVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGK 554

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           + +      YK +    IE D    N ++    K GD    ++     +  G+ P     
Sbjct: 555 VGADWA---YKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMIC 611

Query: 304 AAVITALSNSGRTIEA--------------------------------EAVF---EELKE 328
             V+  L   G+  EA                                +A+F   E L  
Sbjct: 612 NIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLS 671

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY---ANAGR 385
            G+K   + YN L+    K+G  + A  V+ +ME  G +PD  T++ L+  Y   ++ G+
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGK 731

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
             S   ++ E  +S   PN   Y+ I+ G  D G  +   + L EMKS G+ PD   YN 
Sbjct: 732 ALSTYSMMMEAGIS---PNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNA 788

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +I    K      +M  +  M+++G+ P T T+N LI    K G+  +A EL +EM +R 
Sbjct: 789 LISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRR 848

Query: 506 YFPCTTTYNIMINLLGE-----QERWEDVKRLLGNMRAQGLLPNVV 546
             P T+TY  MI+ L +     +  W   K+ +    A+GLL  ++
Sbjct: 849 VSPNTSTYCTMISGLCKLCTHPEVEWN--KKAMYLAEAKGLLKEMI 892



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 189/417 (45%), Gaps = 8/417 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
           Y  +I  L ++ K   A  +S+  RL  +  N     AL++   R   +++   L+  M 
Sbjct: 437 YGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   D INY+ +I    +    +++L     +E++  ++  D    N +I G  K G 
Sbjct: 497 SKGVTLDHINYTSLIDVFFKGGDEEAAL--SWAEEMQEKEMPWDVVSYNVLISGLLKFGK 554

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                 + GM +  G+ P  AT+  ++ +    G       +++++K  G+KP     N 
Sbjct: 555 VGADWAYKGMREK-GIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNI 613

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    + G +K+A  ++ +M    + P+  TY + +D  +   R ++     + +    
Sbjct: 614 VVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYG 673

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K +  +Y+ ++A     G  ++   V+++M++ G  PDT  +N ++  +   + +  A+
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKAL 733

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
           + +  M+  GI P+  T+NT+I      G     E+   EM+ RG  P   TYN +I+  
Sbjct: 734 STYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQ 793

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
            +    ++   +   M A GL+P   TY  L+  + + G+   A E ++ +  + V+
Sbjct: 794 AKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVS 850



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 22/302 (7%)

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY-ANAGRWESARIVLKEM 396
           ++ L + Y+  G L  A   +S M   GV+PD   ++ LI  +  N    +   +V  +M
Sbjct: 61  FHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKM 120

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+ F  + ++      G+      +L+   +  +  DT  YN +I    ++   
Sbjct: 121 IACGVSPDVFALNVLIHSLCKVGQLSFAISLLR---NRVISVDTVTYNTVISGLCEHGLA 177

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A      M+  GI PDT+++NTLID   K G + RA+ L +E+ E      T   +  
Sbjct: 178 DEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSY 237

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            NL   +E + D       M   G  P+VVT++++++   + G+  +      GL     
Sbjct: 238 YNLHAIEEAYRD-------MVMSGFDPDVVTFSSIINRLCKDGKVMEG-----GL----- 280

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
              R M   G+ P+++   +L+++  + +    A A+   M   G+  D+V YT LM  L
Sbjct: 281 -LLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGL 339

Query: 637 IR 638
            +
Sbjct: 340 FK 341



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 15/168 (8%)

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED-VKRLLGNM 536
           ++TL   +  CGR   A      M   G  P    +N +I+         D V  +   M
Sbjct: 61  FHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKM 120

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
            A G+ P+V     L+    + G+   AI  L           RV+  D      +  N+
Sbjct: 121 IACGVSPDVFALNVLIHSLCKVGQLSFAISLLRN---------RVISVD-----TVTYNT 166

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           +I+   E     EA+  L  M + G+ PD V++ TL+    +V  F +
Sbjct: 167 VISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFAR 214


>gi|115479233|ref|NP_001063210.1| Os09g0423300 [Oryza sativa Japonica Group]
 gi|50725891|dbj|BAD33419.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|50726131|dbj|BAD33652.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113631443|dbj|BAF25124.1| Os09g0423300 [Oryza sativa Japonica Group]
 gi|125605742|gb|EAZ44778.1| hypothetical protein OsJ_29409 [Oryza sativa Japonica Group]
          Length = 962

 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 234/522 (44%), Gaps = 58/522 (11%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNA-----LISACARNDDLEKALNLMS 217
           E  Y  +I   GR++K  +A L  ++ R +    NA     +I+  AR+DD E A  ++ 
Sbjct: 437 ETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILE 496

Query: 218 KMRQDGYHCDFINYSLV--IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
            MR  G  C  I   LV    S+ R +K+   L    YK     KI  D    + ++ GF
Sbjct: 497 DMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYK-----KILFDATSCSILVTGF 551

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +     +AMR L   +      +   Y  +I +   +G   +A  ++ ++ +S   P  
Sbjct: 552 VQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNL 611

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + Y +++  +  M    DAE +  E++ S  + D   YS+++  Y  AGR E A +VL++
Sbjct: 612 RIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLED 671

Query: 396 MEVS-HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           ME      P+ +++  +L  Y+  G  ++       +  S VE D   YN +I+  G+  
Sbjct: 672 MEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAI 731

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF---------------- 498
            +      FD M+ +G   +T+T N L+D + K G +++AE++F                
Sbjct: 732 PVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMADIISYNT 791

Query: 499 ------------------EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
                             + MQE G+      YN M++  G+  + E+   +L  M   G
Sbjct: 792 IIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAG 851

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
              +  TY  +++IYG+ G        +EG++    N    +++ G +P   + N+LI A
Sbjct: 852 CEFDHYTYNIMINIYGRKGW-------IEGVA----NVLAELKSRGGEPDLYSYNTLIKA 900

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +G      +A  ++Q M+  G+  D VTYT L+ AL R + F
Sbjct: 901 YGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENF 942



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 192/430 (44%), Gaps = 31/430 (7%)

Query: 231 YSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           Y L +Q++      +++  LL ++  +  C    LD Q  N +I   AK        ++L
Sbjct: 230 YHLALQAIAWKEDWEAAGQLLHEMVADSGC---ALDAQAFNGLIYVCAKRRLVDWGTKWL 286

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
            M     + P  +T   ++      G   EAE  F ++++ G+K    AY+A++  Y ++
Sbjct: 287 HMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIKC-VNAYSAMVTLYTRL 345

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G+   +E V++ M    V+P+   + + ++AY   G+ E A +VLK +       N   Y
Sbjct: 346 GHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAY 405

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY    + Q+  +V   +KS+G+ PD   Y  MI+ FG+ +    A+  + ++ +
Sbjct: 406 NTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRN 465

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G +P+   + T+I+   +    + A E+ E+M+  G   C++   +++   G   R   
Sbjct: 466 SGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAG-CQCSSIVTVLVRAYGSVGRMHK 524

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------- 569
           V ++L     + +L +  + + LV  + Q+   ++A+  L                    
Sbjct: 525 VLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILIC 584

Query: 570 -----GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                G  D AV  +  M      P+     S+I+ F   +R  +A A+   +K +    
Sbjct: 585 SCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVL 644

Query: 625 DVVTYTTLMK 634
           D++ Y+ +++
Sbjct: 645 DMIAYSVIVR 654



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/509 (20%), Positives = 212/509 (41%), Gaps = 32/509 (6%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
           +F  ++N L+ + +SE A+              ++ E  RA       S++  L  +  S
Sbjct: 474 NFYTMINLLARHDDSEGAT--------------EILEDMRAAGCQC-SSIVTVLVRAYGS 518

Query: 143 IDLAYAVVSWLQKHNLCYSYELLY-----SILIHALGRSEKLYEAFLLSQRQR-----LT 192
           +   + V   LQ    C+  ++L+     SIL+    ++  + EA  + + ++       
Sbjct: 519 VGRMHKV---LQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFE 575

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
              Y+ LI +C      + A+ + ++M +   H +   Y  +I   +   +   +  + L
Sbjct: 576 DNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDA--EAL 633

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALS 311
           Y E++     LD    + ++  + KAG    A   L  M +   + P    +  ++    
Sbjct: 634 YLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQ 693

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   +    +  + +S ++     YN ++    +   + +   +  EM + G L +  
Sbjct: 694 KCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTV 753

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T ++L+D Y  AG +  A  V   M       +   Y+ I+A +   G+++     ++ M
Sbjct: 754 TLNVLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRM 812

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           + +G       YN M+D +GK   L    A   +M   G E D  T+N +I+ + + G  
Sbjct: 813 QEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +    +  E++ RG  P   +YN +I   G     ED  +L+  MR +G+  + VTYT L
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNL 932

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           +    ++  F +A++    +    V A R
Sbjct: 933 IAALQRNENFLEAVKWSLWMKQTGVAATR 961



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 19/252 (7%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHAM 460
           K N+  Y   L     + +W+   Q+L EM + SG   D   +N +I    K   +    
Sbjct: 224 KGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGT 283

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL- 519
                ML   ++P+  T   L+  + + G    AE  F +M++ G   C   Y+ M+ L 
Sbjct: 284 KWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCG-IKCVNAYSAMVTLY 342

Query: 520 --LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             LG   + E+V  L+ N     ++PN+  +   ++ Y Q G+ ++A   L+ L D+   
Sbjct: 343 TRLGHFAKSEEVITLMNN---DEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDE--- 396

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   G+  + +A N++I  +G+     +A  V   +K  GL PD  TY ++++   
Sbjct: 397 --------GIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFG 448

Query: 638 RVDKFHKVFSSY 649
           R DK+ +    Y
Sbjct: 449 RADKYKQAILYY 460


>gi|125563762|gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
          Length = 962

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 234/522 (44%), Gaps = 58/522 (11%)

Query: 163 ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNA-----LISACARNDDLEKALNLMS 217
           E  Y  +I   GR++K  +A L  ++ R +    NA     +I+  AR+DD E A  ++ 
Sbjct: 437 ETTYRSMIEGFGRADKYKQAILYYRKLRNSGFKPNASNFYTMINLLARHDDSEGATEILE 496

Query: 218 KMRQDGYHCDFINYSLV--IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
            MR  G  C  I   LV    S+ R +K+   L    YK     KI  D    + ++ GF
Sbjct: 497 DMRAAGCQCSSIVTVLVRAYGSVGRMHKVLQILKACFYK-----KILFDATSCSILVTGF 551

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            +     +AMR L   +      +   Y  +I +   +G   +A  ++ ++ +S   P  
Sbjct: 552 VQNSLVEEAMRVLREKKWKDSDFEDNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNL 611

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
           + Y +++  +  M    DAE +  E++ S  + D   YS+++  Y  AGR E A +VL++
Sbjct: 612 RIYCSMIDVFSIMERFTDAEALYLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLED 671

Query: 396 MEVS-HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           ME      P+ +++  +L  Y+  G  ++       +  S VE D   YN +I+  G+  
Sbjct: 672 MEKQKEIVPDKYLFLDMLRTYQKCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAI 731

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF---------------- 498
            +      FD M+ +G   +T+T N L+D + K G +++AE++F                
Sbjct: 732 PVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNKAEKVFLMARKQGMADIISYNT 791

Query: 499 ------------------EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
                             + MQE G+      YN M++  G+  + E+   +L  M   G
Sbjct: 792 IIAAHAKNGDFRSMIYFVQRMQEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAG 851

Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
              +  TY  +++IYG+ G        +EG++    N    +++ G +P   + N+LI A
Sbjct: 852 CEFDHYTYNIMINIYGRKGW-------IEGVA----NVLAELKSRGGEPDLYSYNTLIKA 900

Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +G      +A  ++Q M+  G+  D VTYT L+ AL R + F
Sbjct: 901 YGIAGMPEDAVKLMQEMRIKGIAADRVTYTNLIAALQRNENF 942



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 192/430 (44%), Gaps = 31/430 (7%)

Query: 231 YSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           Y L +Q++      +++  LL ++  +  C    LD Q  N +I   AK        ++L
Sbjct: 230 YHLALQAIAWKEDWEAAGQLLHEMVADSGC---ALDAQAFNGLIYVCAKRRLVDWGTKWL 286

Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
            M     + P  +T   ++      G   EAE  F ++++ G+K    AY+A++  Y ++
Sbjct: 287 HMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCGIKC-VNAYSAMVTLYTRL 345

Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
           G+   +E V++ M    V+P+   + + ++AY   G+ E A +VLK +       N   Y
Sbjct: 346 GHFAKSEEVITLMNNDEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDEGIALNVVAY 405

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + ++ GY    + Q+  +V   +KS+G+ PD   Y  MI+ FG+ +    A+  + ++ +
Sbjct: 406 NTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFGRADKYKQAILYYRKLRN 465

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G +P+   + T+I+   +    + A E+ E+M+  G   C++   +++   G   R   
Sbjct: 466 SGFKPNASNFYTMINLLARHDDSEGATEILEDMRAAG-CQCSSIVTVLVRAYGSVGRMHK 524

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------- 569
           V ++L     + +L +  + + LV  + Q+   ++A+  L                    
Sbjct: 525 VLQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFEDNLYHILIC 584

Query: 570 -----GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
                G  D AV  +  M      P+     S+I+ F   +R  +A A+   +K +    
Sbjct: 585 SCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDAEALYLELKASSCVL 644

Query: 625 DVVTYTTLMK 634
           D++ Y+ +++
Sbjct: 645 DMIAYSVIVR 654



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/509 (20%), Positives = 212/509 (41%), Gaps = 32/509 (6%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
           +F  ++N L+ + +SE A+              ++ E  RA       S++  L  +  S
Sbjct: 474 NFYTMINLLARHDDSEGAT--------------EILEDMRAAGCQC-SSIVTVLVRAYGS 518

Query: 143 IDLAYAVVSWLQKHNLCYSYELLY-----SILIHALGRSEKLYEAFLLSQRQR-----LT 192
           +   + V   LQ    C+  ++L+     SIL+    ++  + EA  + + ++       
Sbjct: 519 VGRMHKV---LQILKACFYKKILFDATSCSILVTGFVQNSLVEEAMRVLREKKWKDSDFE 575

Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
              Y+ LI +C      + A+ + ++M +   H +   Y  +I   +   +   +  + L
Sbjct: 576 DNLYHILICSCKEAGCCDDAVRIYNQMPKSATHPNLRIYCSMIDVFSIMERFTDA--EAL 633

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL-GMAQGVGLSPKTATYAAVITALS 311
           Y E++     LD    + ++  + KAG    A   L  M +   + P    +  ++    
Sbjct: 634 YLELKASSCVLDMIAYSVIVRMYTKAGRPEDACLVLEDMEKQKEIVPDKYLFLDMLRTYQ 693

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
             G   +    +  + +S ++     YN ++    +   + +   +  EM + G L +  
Sbjct: 694 KCGLLEKLSDTYYWILKSQVELDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTV 753

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T ++L+D Y  AG +  A  V   M       +   Y+ I+A +   G+++     ++ M
Sbjct: 754 TLNVLLDIYGKAGLFNKAEKVFL-MARKQGMADIISYNTIIAAHAKNGDFRSMIYFVQRM 812

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           + +G       YN M+D +GK   L    A   +M   G E D  T+N +I+ + + G  
Sbjct: 813 QEAGFPVSLEAYNCMLDAYGKAGQLEEFAAVLQKMERAGCEFDHYTYNIMINIYGRKGWI 872

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           +    +  E++ RG  P   +YN +I   G     ED  +L+  MR +G+  + VTYT L
Sbjct: 873 EGVANVLAELKSRGGEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRIKGIAADRVTYTNL 932

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           +    ++  F +A++    +    V A R
Sbjct: 933 IAALQRNENFLEAVKWSLWMKQTGVAATR 961



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 19/252 (7%)

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS-SGVEPDTHFYNVMIDTFGKYNCLHHAM 460
           K N+  Y   L     + +W+   Q+L EM + SG   D   +N +I    K   +    
Sbjct: 224 KGNAEAYHLALQAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKRRLVDWGT 283

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL- 519
                ML   ++P+  T   L+  + + G    AE  F +M++ G   C   Y+ M+ L 
Sbjct: 284 KWLHMMLERDVQPNVSTVGMLMGLYQRIGNLPEAEFTFAKMRKCG-IKCVNAYSAMVTLY 342

Query: 520 --LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             LG   + E+V  L+ N     ++PN+  +   ++ Y Q G+ ++A   L+ L D+   
Sbjct: 343 TRLGHFAKSEEVITLMNN---DEVVPNMENWLVRLNAYCQQGKMEEAELVLKSLVDE--- 396

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
                   G+  + +A N++I  +G+     +A  V   +K  GL PD  TY ++++   
Sbjct: 397 --------GIALNVVAYNTVITGYGKVSDMQKAMEVFDRLKSAGLAPDETTYRSMIEGFG 448

Query: 638 RVDKFHKVFSSY 649
           R DK+ +    Y
Sbjct: 449 RADKYKQAILYY 460


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 223/510 (43%), Gaps = 71/510 (13%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           L  +E++ EA  +S    +  +TY ALI+   R+  L  ALNL++ M       D   Y+
Sbjct: 160 LADAERVLEAAKVSGAANV--VTYTALINGYCRSGRLADALNLIASMPVAP---DTYTYN 214

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            V++ L    + + +  ++L +E+  +    +       I  F + G    A++ L    
Sbjct: 215 TVLKGLCGAKQWEKA--EELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMP 272

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             G +P    Y+ ++   S  GR  +A  +   +     KP T  YNA LKG       K
Sbjct: 273 RYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWK 329

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           D   +++EM R    P+E T+S+L       G  + A  V+++M+    +P+  IY+ ++
Sbjct: 330 DVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLI 389

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDT-------------------------------- 440
             + ++G       +L  M  +   PDT                                
Sbjct: 390 NYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYDVEELIAQMLREDCP 446

Query: 441 ---HFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
                +N++ID+  ++  ++HA+  F++M      PD +T+++LI+   + G  + A EL
Sbjct: 447 LIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIEL 506

Query: 498 FEEMQERGYFPCTT---TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           F+ M      PC     +YN ++  L    RWED   L+ NM  +   PN +T+  L++ 
Sbjct: 507 FQSM------PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINS 560

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
                       C +G +D+A+  F+ M   G  P     N+LIN F E  R  +A  +L
Sbjct: 561 L-----------CQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLL 609

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             M     KPD ++Y + +K L R +++ +
Sbjct: 610 STMS---CKPDAISYNSTLKGLCRAERWKE 636



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 174/366 (47%), Gaps = 23/366 (6%)

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
           D   A+R +G +      P       +I  L    R  +AE V + LKESG      ++N
Sbjct: 91  DLDAALRLVG-SMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHN 148

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
            L+ GY + G L DAE V+   + SG   +  TY+ LI+ Y  +GR   A  ++  M V+
Sbjct: 149 TLVAGYCRDGRLADAERVLEAAKVSGA-ANVVTYTALINGYCRSGRLADALNLIASMPVA 207

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
              P+++ Y+ +L G     +W++  ++++EM  +   P+   +   I +F +   L HA
Sbjct: 208 ---PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHA 264

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
           +   +RM   G  PD + ++TL++   + GR D A  L   M  +   P T  YN  +  
Sbjct: 265 VQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKG 321

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L   ERW+DV  L+  M  +   PN  T++ L     Q G  D A+E +E          
Sbjct: 322 LCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQ--------- 372

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M+  G +P  +  N+LIN F E  R  +A  +L  M  N   PD +++   +KAL R 
Sbjct: 373 --MQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRT 427

Query: 640 DKFHKV 645
           ++++ V
Sbjct: 428 ERWYDV 433



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 22/357 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
           +++ LK LC +    D+   +   ++K   C   E  +S+L   L   G  +   E    
Sbjct: 315 YNAALKGLCMAERWKDVGELIAEMVRKD--CPPNEATFSMLTSCLCQHGLVDCAMEVVEQ 372

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            Q+    P  + YN LI+  +    ++ AL L+  M  +    D I+++  +++L RT +
Sbjct: 373 MQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNP---DTISFNAALKALCRTER 429

Query: 244 I--DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
                 L+ ++ +E +C  IE+   +L D      + G  + A+           +P   
Sbjct: 430 WYDVEELIAQMLRE-DCPLIEMTFNILID---SLCQHGLVNHAIEVFEQMPKYRCTPDIV 485

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY+++I   S  G    A  +F+ +     KP   +YNA+LKG  +    +DA  +++ M
Sbjct: 486 TYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANM 542

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
            R    P+E T+++LI++    G  + A  V K+M    + P+ F Y+ ++ G+ ++G  
Sbjct: 543 ARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRL 602

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
                +L  M     +PD   YN  +    +      A      ML +   P+ +T+
Sbjct: 603 DDALNLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 12/347 (3%)

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           + A+I A   S    +A   F ++   GL P +  +N LL   +K  + + A  V +E  
Sbjct: 98  HEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-T 156

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
           +  V  D +++ ++I      G  +    VL +ME     PN  +Y+ ++ G    G+ +
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           R  Q+  +M    V  + + Y V+I+ F K       +  +++M   GI P+  T+N++I
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                 G+ + A ELF+EM+ERG      TYN +I  L ++ R  + +RL+  M+  GL 
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           PN+++Y TL+D Y           C  G  D+A + F  M++ G  PS    N LI  F 
Sbjct: 337 PNLISYNTLIDGY-----------CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFS 385

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           E +  A    +++ M+  GL P  VTYT LM AL+R D   K F  Y
Sbjct: 386 EAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIY 432



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 207/449 (46%), Gaps = 14/449 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L + A+I+A  R+   E+AL   ++M   G       ++ ++  L ++N  + +   +++
Sbjct: 96  LIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKA--WRVF 153

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E +   ++LD      +I G  + G   K    LG  + +GLSP    Y  +I     +
Sbjct: 154 NETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G     + +F ++ E  +      Y  L+ G+ KMG  KD   +  +M+ +G++P+ +TY
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + +I    N G+  +A  +  EM       N   Y+ ++ G           +++  MK 
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN +ID +     L  A + F++M S G  P   T+N LI    +      
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
             ++  EM+ RG  P   TY I+++ L   +  E   ++  +M   GL+ ++  Y  L  
Sbjct: 393 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL-- 450

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
           I+G          C+ G   +A   F+ +    LKP+++  N++I  + ++     A  +
Sbjct: 451 IHGL---------CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRL 501

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           L+ M ENG+ P+V +Y + ++ L + +K+
Sbjct: 502 LKEMGENGMVPNVASYNSTIQILCKDEKW 530



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 181/404 (44%), Gaps = 12/404 (2%)

Query: 166 YSILIHA---LGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           + I+I     +G  +K +E     +   L+P  + Y  LI  C +N D+E+   L  KM 
Sbjct: 167 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 226

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           +     +   Y+++I    +       +  +LY++++   I  +    N +I      G 
Sbjct: 227 ELDVVANQYTYTVLINGFFKMGLKKDGI--ELYEKMKLTGIVPNVYTYNSMICRCCNDGK 284

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A       +  G++    TY  +I  L    R +EAE +   +K  GL P   +YN 
Sbjct: 285 LNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNT 344

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY  +G L  A  + ++M+ SG  P   TY++LI  ++ A        +++EME   
Sbjct: 345 LIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P+   Y+ ++         ++ FQ+   M+ +G+  D + Y V+I        +  A 
Sbjct: 405 LSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEAS 464

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F  +    ++P+ + +NT+I  + K G   RA  L +EM E G  P   +YN  I +L
Sbjct: 465 KLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQIL 524

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            + E+W + + LL +M   GL P++  +  +        RFD+ 
Sbjct: 525 CKDEKWTEAEVLLKDMIELGLKPSISIWNMI-----SKARFDNV 563



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 178/402 (44%), Gaps = 15/402 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           +L   ++  +I  C     L+K   ++ +M + G   + + Y+ +I    +   I+    
Sbjct: 161 KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK- 219

Query: 250 QKLYKEIECDKIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
           Q  YK  E D +    Q    V++ GF K G     +      +  G+ P   TY ++I 
Sbjct: 220 QLFYKMGELDVVA--NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMIC 277

Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
              N G+   A  +F+E++E G+      YN L+ G  +   + +AE ++  M+R G+ P
Sbjct: 278 RCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 337

Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
           +  +Y+ LID Y + G  + A  +  +M+ S   P+   Y+ ++AG+ +         ++
Sbjct: 338 NLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMV 397

Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
           +EM++ G+ P    Y +++D   + + +  A   +  M   G+  D   +  LI      
Sbjct: 398 REMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVV 457

Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
           G    A +LF+ + E    P    YN MI    ++       RLL  M   G++PNV +Y
Sbjct: 458 GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 517

Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            + + I  +  ++ +A E L           + M   GLKPS
Sbjct: 518 NSTIQILCKDEKWTEA-EVL----------LKDMIELGLKPS 548


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 143/567 (25%), Positives = 229/567 (40%), Gaps = 58/567 (10%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAF- 183
           + +SL+   C     I  A  V++ +   NL    YSY    + L+    R     EAF 
Sbjct: 369 ICNSLINGYCK-RGEIHEAEGVITRMVDWNLKPDSYSY----NTLLDGYCREGHTSEAFN 423

Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
               +L +    T LTYN L+    R    + AL +   M + G   D + YS ++  L 
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
           +    + +    L+K+I            N +I G  K G   +A       + +G SP 
Sbjct: 484 KMENFEGA--STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPD 541

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +I     +    +A  V   ++   + P  + YN+L+ G  K   L +   +++
Sbjct: 542 GITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLT 601

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM   G+ P+  TY  LID +   G  + A     EM  +    N  I S +++G    G
Sbjct: 602 EMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLG 661

Query: 420 EWQRTFQVLKEMKSSGVEPDTH--------------------------------FYNVMI 447
                  ++++M   G  PD                                   YN+ I
Sbjct: 662 RIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 721

Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
               K   +  A   F  +  +G  PD  T+ TLI  +   G  D A  L +EM  RG  
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P   TYN +IN L + E  +  +RL   +  +GL PNVVTY TL+D Y + G  D A + 
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFK- 840

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
              L D+ +        +G+ PS +  ++LIN   +      +  +L  M + G+   ++
Sbjct: 841 ---LKDKMIE-------EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 628 TYTTLMKALIRVDKFHKVFSSYLFFNI 654
            Y TL++  IR  +  K+   Y   +I
Sbjct: 891 EYCTLVQGYIRSGEMQKIHKLYDMMHI 917



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 225/492 (45%), Gaps = 24/492 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSK 218
            + SI+++A  +  K+ EA    ++     + P  +TY++LI+      D+E A  ++  
Sbjct: 227 FMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKF 286

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           M + G   + + Y+L+I+   +  K+D +  +L+ + +E     +  D +    +I G+ 
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAA---LVPDERAYGVLIDGYC 343

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           + G    A+R L     +GL        ++I      G   EAE V   + +  LKP + 
Sbjct: 344 RTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSY 403

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +YN LL GY + G+  +A  +  +M + G+ P   TY+ L+      G ++ A  +   M
Sbjct: 404 SYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM 463

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                 P+   YS +L G      ++    + K++ + G       +N MI    K   +
Sbjct: 464 MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKM 523

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             A   FD+M   G  PD IT+ TLID + K     +A ++   M+     P    YN +
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 583

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           I+ L +  R  +V  LL  M  +GL PN+VTY  L+D +           C EG+ D+A 
Sbjct: 584 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW-----------CKEGMLDKAF 632

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +++  M  +GL  + +  +++++      R  EA  ++Q M ++G  PD   +   +K+ 
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSD 689

Query: 637 IRVDKFHKVFSS 648
           IR     K+  S
Sbjct: 690 IRYAAIQKIADS 701



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 161/357 (45%), Gaps = 14/357 (3%)

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
            +G+ +    SP    +  ++      G T  A  VF+ + + G  P  ++ N+LL   V
Sbjct: 145 LVGVYREFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLV 202

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K G    A +V  +M R G++PD    S++++A+   G+ + A   +K+ME    +PN  
Sbjct: 203 KNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIV 262

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y  ++ GY   G+ +    VLK M   GV  +   Y ++I  + K   +  A      M
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 322

Query: 467 LSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
             E  + PD   +  LID + + G+ D A  L +EM   G        N +IN   ++  
Sbjct: 323 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
             + + ++  M    L P+  +Y TL+D Y           C EG + +A N    M  +
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGY-----------CREGHTSEAFNLCDKMLQE 431

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           G++P+ L  N+L+          +A  +   M + G+ PD V Y+TL+  L +++ F
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 488



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 175/388 (45%), Gaps = 26/388 (6%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +L+   C + S++  A+ V   +++  +  S E+ Y+ LI  L +S +L E   LL++
Sbjct: 545 YRTLIDGYCKA-SNVGQAFKVKGAMEREPISPSIEM-YNSLISGLFKSRRLVEVTDLLTE 602

Query: 188 R--QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + LTP  +TY ALI    +   L+KA +   +M ++G   + I  S ++  L R  +
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR 662

Query: 244 IDSS--LLQKL-----YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGL 296
           ID +  L+QK+     + + EC    L   +    I   A + D S     L        
Sbjct: 663 IDEANLLMQKMVDHGFFPDHEC---FLKSDIRYAAIQKIADSLDESCKTFLL-------- 711

Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
            P    Y   I  L  +G+  +A   F  L   G  P    Y  L+ GY   G + +A  
Sbjct: 712 -PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770

Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
           +  EM R G++P+  TY+ LI+    +   + A+ +  ++      PN   Y+ ++ GY 
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
             G     F++  +M   G+ P    Y+ +I+   K+  +  +M   ++M+  G++   I
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQER 504
            + TL+  + + G   +  +L++ M  R
Sbjct: 891 EYCTLVQGYIRSGEMQKIHKLYDMMHIR 918


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 202/449 (44%), Gaps = 48/449 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +T + L+        +  AL L  KM + G+  D + Y  +I +L +T +   +      
Sbjct: 10  VTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA------ 63

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
                  +EL  ++L+++  G                           TY  VI +L   
Sbjct: 64  -------VELHRRMLSEICSG------------------------NFFTYGLVIDSLCKD 92

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G  I+   +F E+   G+ P    Y++L+ G  ++G L++A  +  EM   G+  +  TY
Sbjct: 93  GLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITY 152

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI A    G W+ A     +M      P+   ++ ++     +G+ Q  +++ + M  
Sbjct: 153 NSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIK 212

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G  P+   YN +++    ++ + HA+  F+ M+  GI+ D I++NTLI+ +   G+ + 
Sbjct: 213 QGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEE 272

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A  LF +MQ     P  TTY I++  L +  R    K L  NM+  G  P++ TYT L+D
Sbjct: 273 AMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLD 332

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
              ++G       C+E    +A++ FR +++   KPS    + LI    + +R   A  +
Sbjct: 333 GLCKNG-------CIE----EAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEI 381

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              +   GL P++VTY  ++  L +  K 
Sbjct: 382 FDEIPTVGLVPNIVTYNIMINGLCKEGKL 410



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 200/452 (44%), Gaps = 20/452 (4%)

Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTPL------TYNALISACARNDDLEKALNLMS 217
           LLY  LI+AL ++ +   A  L  R+ L+ +      TY  +I +  ++    K L +  
Sbjct: 45  LLYGYLINALRKTRQARRAVEL-HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFR 103

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   + I YS +I  L R  K+  ++   L+ E+    I+ +    N +I    +
Sbjct: 104 EMINMGICPNVIVYSSLINGLCRVGKLREAV--NLFDEMVSQGIKANVITYNSLIHASCR 161

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G   +A R      G G+ P   T+  +I  LS  G+  EA  +FE + + G  P    
Sbjct: 162 FGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVT 221

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           YN+LL G      +  A  +   M   G+  D  +Y+ LI+ Y  +G+ E A  + ++M+
Sbjct: 222 YNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P+   Y+ +L      G  +   ++   M+  G  P    Y V++D   K  C+ 
Sbjct: 282 YEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIE 341

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A+  F  + S   +P    ++ LI   F+  R++ A E+F+E+   G  P   TYNIMI
Sbjct: 342 EAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMI 401

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
           N L ++ +  + +RL   M   G   + +++  ++  + Q  +   A+E L         
Sbjct: 402 NGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFL--------- 452

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
             + MR     P++     L+N +  D + +E
Sbjct: 453 --KRMREKNFSPNDSVTLMLVNLYAADAQSSE 482



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 107/265 (40%), Gaps = 52/265 (19%)

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           S  +PN    S ++ G    G+     ++  +M  SG + D   Y  +I+   K      
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
           A+    RMLSE    +  T+  +ID   K G   +  ++F EM               IN
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREM---------------IN 107

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
           +                    G+ PNV+ Y++L++   + G+  +A           VN 
Sbjct: 108 M--------------------GICPNVIVYSSLINGLCRVGKLREA-----------VNL 136

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F  M + G+K + +  NSLI+A        EA      M   G+ PDVVT+TTL+  L +
Sbjct: 137 FDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSK 196

Query: 639 VDKFHKVFSSYLFFNIYKMLSYSGE 663
             K  + +       I++++   GE
Sbjct: 197 KGKVQEAYK------IFELMIKQGE 215



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
           +  G +P+ +T +TL+      G+   A ELF++M   G+      Y  +IN L +  + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
                L   M ++    N  TY  ++D             C +GL+ + +  FR M   G
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSL-----------CKDGLAIKGLKMFREMINMG 109

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + P+ +  +SLIN      +  EA  +   M   G+K +V+TY +L+ A  R
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCR 161


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/525 (23%), Positives = 236/525 (44%), Gaps = 37/525 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYS--ILIHALGRSEKLYEAF 183
           ++ LL  LC +  S+D A      ++KH +     +Y  L    +L+  +  + K+ +  
Sbjct: 309 YNILLHGLCVA-GSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           LL   Q L P  +TY  LI    +  ++E+AL L  +    G+  + I Y++++  L + 
Sbjct: 368 LL---QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKV 424

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
            +I+ +L   L+ E+E  ++E D  + + +I G  K G   +A +     +     P   
Sbjct: 425 GRIEEAL--TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHF 482

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
              AV+  L  +G   EA   F+      L      YN ++ GYV++  + +A  +  +M
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G+ P   T++ LI+ +   G    AR +L+ + +    P+   Y+ ++  Y + G  
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602

Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
           Q  F  L EM+++ V P    Y V+I    + N +H ++   + M ++G+ PD++T+NT+
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662

Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
           I C  K     +A +L+  M      P   TY ++IN L      +DV R++ ++  + +
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVN 577
                TY T++  +   G+   A+                         C  GL  +A  
Sbjct: 723 TLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782

Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            F +M ++G+ P      +++NAF +   ++  F  L  + ++G 
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 216/486 (44%), Gaps = 52/486 (10%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           L ++ L  A +R++ +  AL +++KM+   +      Y+ ++ ++  T+     ++  +Y
Sbjct: 171 LVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTD-----IMWDVY 225

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            EI+           + +I G  +      A+ FL  +  V + P   +   +++     
Sbjct: 226 NEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKV 284

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A + F  + ++GL   + +YN LL G    G + +A     +ME+ GV PD  TY
Sbjct: 285 GLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTY 344

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + L   +   G    AR V+++M +    P+   Y+ ++ G+   G  +   ++ +E  S
Sbjct: 345 NTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLS 404

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G + +  FYN+++    K   +  A+  FD M +  +EPD I ++ LI    K G   R
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR 464

Query: 494 AEELFEEMQERGYFPC-----------------------------------TTTYNIMIN 518
           A +L+E+M+ +  FP                                       YNIMI+
Sbjct: 465 AYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMID 524

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
                +   +  +L   M  +G+ P+VVT+ TL++ + + G   +A + LE         
Sbjct: 525 GYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE--------- 575

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             V+R  GL PS +   +L+NA+ E     E F  L  M+ N + P  VTYT L+K L R
Sbjct: 576 --VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 639 VDKFHK 644
            +K H+
Sbjct: 634 QNKMHE 639



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 223/530 (42%), Gaps = 61/530 (11%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--F 183
            P ++SLL N+       D+ + V + ++      S E   SILIH L    KL +A  F
Sbjct: 205 VPTYNSLLHNM----RHTDIMWDVYNEIKVSGAPQS-ECTTSILIHGLCEQSKLEDAISF 259

Query: 184 LLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
           L    + + P  ++ N ++S   +   ++ A +    M ++G   D  +Y++++      
Sbjct: 260 LHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLH----- 314

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
                                           G   AG   +A+ F    +  G+ P   
Sbjct: 315 --------------------------------GLCVAGSMDEALGFTDDMEKHGVEPDVV 342

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
           TY  +       G    A  V +++   GL P    Y  L+ G+ +MG +++A  +  E 
Sbjct: 343 TYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQET 402

Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
              G   +   Y++L+      GR E A  +  EME    +P+  +YS ++ G    G  
Sbjct: 403 LSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFV 462

Query: 422 QRTFQVLKEMKSSGVEPDTHFYN--VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           QR +Q+ ++M+     P  HF    V++  F   N +  A   FD      +  D + +N
Sbjct: 463 QRAYQLYEQMRLKRKFPH-HFAQRAVLLGLFKNGN-ISEARNYFDTWTRMDLMEDVVLYN 520

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            +ID + +      A +L+ +M ERG  P   T+N +IN    +    + +++L  +R +
Sbjct: 521 IMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLK 580

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL+P+VVTYTTL++ Y + G   +    L  +   AV            P+++    LI 
Sbjct: 581 GLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAV-----------VPTHVTYTVLIK 629

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
                 +  E+  +L+YM   GL PD VTY T+++   +  +  K    Y
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLY 679


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 190/444 (42%), Gaps = 13/444 (2%)

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           ++    +   LE+   L+      G   + I Y+ +I    +  K D  +   L+ E++ 
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCK--KGDMEMANGLFIELKL 267

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                  +    +I GF K GD     R L      GL+     Y  +I A    G  ++
Sbjct: 268 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 327

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A    E + E G KP    YN L+ G  + G + +A+ ++ +    G++P++ +Y+ LI 
Sbjct: 328 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 387

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           AY   G ++ A   L EM     KP+   Y  ++ G    GE      + ++M   GV P
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   YN+++    K   L  A      ML + + PD   + TL+D   + G  D A +LF
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           E   E+G  P    YN MI    +    +D    +  M+ + L P+  TY+T++D Y + 
Sbjct: 508 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 567

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
              D A +            FR M     KP+ +   SLIN F        +  + + M+
Sbjct: 568 HDLDGAQK-----------MFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616

Query: 619 ENGLKPDVVTYTTLMKALIRVDKF 642
             GL P+VVTY+ L+ +  +  K 
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKL 640



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 199/424 (46%), Gaps = 24/424 (5%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI    R  K+ EA  L ++   + L P   +Y  LI A  +    ++A N + +M 
Sbjct: 347 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 406

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  D + Y  ++  L    ++D +L  +  K +E   +  D  + N ++ G  K   
Sbjct: 407 ERGHKPDLVTYGALVHGLVVAGEVDVALTIR-EKMLE-RGVFPDAGIYNILMSGLCKKFK 464

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              A   L       + P    YA ++     +G   EA  +FE   E G+ P    YNA
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++KGY K G +KDA   ++ M++  + PDE TYS +ID Y      + A+ + +EM    
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            KPN   Y+ ++ G+  +G+  R+ ++ +EM++ G+ P+   Y+++I +F K   L  A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE--------------LFEEMQERGY 506
           + F+ ML     P+ +T+N L++   K G    +E+               F  M   G+
Sbjct: 645 SFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGW 704

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL---VDIYGQSGRFDD 563
            P +  YN ++  L +   +    +L   M ++G +P+ V++  L   V + G+S  + +
Sbjct: 705 APRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKN 764

Query: 564 AIEC 567
            + C
Sbjct: 765 IVSC 768



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 13/414 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TY A+I+   +  D +    L+ +M   G   +   Y+ +I +  +   I  ++ + +  
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV-ETIEG 334

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            IEC   + D    N +I G  + G  S+A + L  A G GL P   +Y  +I A    G
Sbjct: 335 MIECG-CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQG 393

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A     E+ E G KP    Y AL+ G V  G +  A  +  +M   GV PD   Y+
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+       +  +A+++L EM      P++F+Y+ ++ G+   G      ++ +     
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P    YN MI  + K+  +  AMA  +RM    + PD  T++T+ID + K    D A
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA 573

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           +++F EM +    P   TY  +IN    +       ++   M+A GL+PNVVTY+ L+  
Sbjct: 574 QKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGS 633

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
           + +  +  D           A + F  M  +   P+++  N L+N F ++   A
Sbjct: 634 FCKEAKLID-----------AASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 224/517 (43%), Gaps = 44/517 (8%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMS-KM 219
           YS L+  L RS    E  ++ +  R+  ++      + +I A + +  +EKAL L    +
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG---QLLND-----V 271
           +   Y  D I  + ++  L +  +I+  + +KLY E+    +E+DG   + +++     +
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIE--IARKLYDEM----LEIDGAGDRCVDNYSTCIM 210

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           + G  K G   +  + +    G G  P    Y  +I      G    A  +F ELK  G 
Sbjct: 211 VKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGF 270

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P  + Y A++ G+ K G  K  + ++ EM   G+  +   Y+ +IDA    G    A  
Sbjct: 271 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 330

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
            ++ M     KP+   Y+ +++G    G+     Q+L++    G+ P+   Y  +I  + 
Sbjct: 331 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYC 390

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K      A      M   G +PD +T+  L+      G  D A  + E+M ERG FP   
Sbjct: 391 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 450

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------- 564
            YNI+++ L ++ +    K LL  M  Q +LP+   Y TLVD + ++G  D+A       
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 565 IE-----------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           IE                 C  G+   A+     M+   L P     +++I+ + +    
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
             A  + + M +   KP+VVTYT+L+    R    H+
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHR 607



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 22/310 (7%)

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA----RIV 392
           AY++LLK   +     + E V+  M    + P     S++I AY+++G  E A      V
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQ---RTFQVLKEMKSSGVEP-DTHFYNVMID 448
           LK        P+    + +L      G  +   + +  + E+  +G    D +   +M+ 
Sbjct: 156 LKTYTYF---PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L       +    +G  P+ I +NTLID + K G  + A  LF E++ +G+ P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TY  +IN   ++  ++ + RLL  M ++GL  NV  Y T++D   + G    A+E +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           EG+ +            G KP  +  N+LI+    D + +EA  +L+     GL P+  +
Sbjct: 333 EGMIEC-----------GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381

Query: 629 YTTLMKALIR 638
           YT L+ A  +
Sbjct: 382 YTPLIHAYCK 391


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 226/522 (43%), Gaps = 49/522 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMR 220
           + +++   GR   ++ A    +R R   +TP +  Y +LI A A   D+++AL+ + KM+
Sbjct: 310 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 369

Query: 221 QDGYHCDFINYSLVIQSLTRTN-------------KIDSSLLQKLY-------------- 253
           ++G     + YS+++   ++               +I  +L   +Y              
Sbjct: 370 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 429

Query: 254 ------KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                 +E+E + I+    + + ++ G+    D  K +      +  G +P   TY  +I
Sbjct: 430 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 489

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
              +  G+  +A  V   +KE G+K   K Y+ ++ G+VK+    +A  V  +M + G+ 
Sbjct: 490 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 549

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD   Y+ +I A+   G  + A   +KEM+    +P +  +  I+ GY   G+ +R+ +V
Sbjct: 550 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 609

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M+  G  P  H +N +I+   +   +  A+   D M   G+  +  T+  ++  +  
Sbjct: 610 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 669

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G   +A E F  +Q  G      TY  ++    +  R +    +   M A+ +  N   
Sbjct: 670 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 729

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+D + + G   D  E        A +  + M+ +G+KP      S I+A  +    
Sbjct: 730 YNILIDGWARRG---DVWE--------AADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 778

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             A   ++ M+  G+KP++ TYTTL+K   R     K  S Y
Sbjct: 779 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 820



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 203/452 (44%), Gaps = 21/452 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYK 254
           Y+ ++       D +K L +  ++++ G+    + Y  +I   T+  KI  +L + ++ K
Sbjct: 450 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 509

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E   + ++ + +  + +I GF K  D + A          G+ P    Y  +I+A    G
Sbjct: 510 E---EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 566

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A    +E+++   +P T+ +  ++ GY K G ++ +  V   M R G +P  HT++
Sbjct: 567 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 626

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+      + E A  +L EM ++    N   Y++I+ GY   G+  + F+    +++ 
Sbjct: 627 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 686

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++ D   Y  ++    K   +  A+A    M +  I  ++  +N LID   + G    A
Sbjct: 687 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 746

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L ++M++ G  P   TY   I+   +        + +  M A G+ PN+ TYTTL+  
Sbjct: 747 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 806

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF--- 611
           + ++            L ++A++ +  M+  G+KP     + L+ +       AEA+   
Sbjct: 807 WARA-----------SLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 855

Query: 612 ---AVLQYMKENGLKPDVVTYTTLMKALIRVD 640
               + + M E GL  D+ T     K L +++
Sbjct: 856 GVMTICKEMVEAGLIVDMGTAVHWSKCLCKIE 887



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 24/376 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++      G    A   FE ++  G+ P ++ Y +L+  Y     + +A   
Sbjct: 305 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 364

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V +M+  G+     TYS+++  ++ AG  E+A     E +  H   N+ IY +I+  +  
Sbjct: 365 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 424

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
               +R   +++EM+  G++     Y+ M+D +         +  F R+   G  P  +T
Sbjct: 425 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 484

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A E+   M+E G      TY++MIN   + + W +   +  +M 
Sbjct: 485 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 544

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSD 573
            +G+ P+V+ Y  ++  +   G  D AI+ ++                        G   
Sbjct: 545 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 604

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +++  F +MR  G  P+    N LIN   E ++  +A  +L  M   G+  +  TYT +M
Sbjct: 605 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 664

Query: 634 KALIRVDKFHKVFSSY 649
           +    V    K F  +
Sbjct: 665 QGYASVGDTGKAFEYF 680



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 58/294 (19%)

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           N   W++     +++    +KP+   +  ++  Y  RG+  R  +  + M++ G+ P + 
Sbjct: 288 NGDNWQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 343

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR----------- 490
            Y  +I  +     +  A++   +M  EGIE   +T++ ++    K G            
Sbjct: 344 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 403

Query: 491 ------------------------YDRAEELFEEMQERGYFPCTTTYNIMIN----LLGE 522
                                    +RAE L  EM+E G       Y+ M++    +  E
Sbjct: 404 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 463

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           ++     KRL    +  G  P VVTY  L+++Y + G+   A+E             RVM
Sbjct: 464 KKGLVVFKRL----KECGFTPTVVTYGCLINLYTKVGKISKALE-----------VSRVM 508

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + +G+K +    + +IN F + +  A AFAV + M + G+KPDV+ Y  ++ A 
Sbjct: 509 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 562


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 11/337 (3%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
            A   A++     SG   EA  VF+ +   G+ P    Y AL+ GY   G  +    +V 
Sbjct: 38  VAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVG 97

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM R GV P+ +TY+ L+  +   G ++SAR++  EM +     N   Y+ ++AG    G
Sbjct: 98  EMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHG 157

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           + +   Q+ + M+  G+ P    +N++ID +GK   + +A+  F++M + G++P  +T+N
Sbjct: 158 KLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYN 217

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
            LI    +      A   F +M+ER   P   TY I+I    ++   +    +L  M   
Sbjct: 218 ELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKA 277

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL  +V +Y  L+              C+EG    A   F+ M + G+KP+N+  + +I 
Sbjct: 278 GLEVDVQSYGVLLHAL-----------CMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIY 326

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +G +    +A  ++  M+++GL P+V +Y   ++ L
Sbjct: 327 GYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLL 363



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 173/377 (45%), Gaps = 11/377 (2%)

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
           S L  L +  +     LD      ++ G  ++GD ++A R   +   +G++P   TY A+
Sbjct: 20  SALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTAL 79

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I      G+     A+  E++  G++P    YN L+  + + G  K A  +  EM   GV
Sbjct: 80  IHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGV 139

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
           + +  +Y++LI      G+ + A  + + M      P+   ++ ++ GY   G+      
Sbjct: 140 VRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALH 199

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
              +MK++G++P    YN +I  F +   + HA+ AF  M    + P  +T+  LI    
Sbjct: 200 FFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFA 259

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K    DRA E+  EM++ G      +Y ++++ L  + +    ++L  +M ++G+ PN V
Sbjct: 260 KENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNV 319

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
            Y  ++  YG+           EG S +A+     MR  GL P+  +    I     + +
Sbjct: 320 LYDMMIYGYGR-----------EGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGK 368

Query: 607 DAEAFAVLQYMKENGLK 623
             EA A++  M++ GL+
Sbjct: 369 CQEAEALIGDMEDAGLQ 385



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 7/326 (2%)

Query: 163 ELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
           E+ Y+ LIH     G+ E  +      +R  + P   TYN L+    R  + + A  L  
Sbjct: 73  EVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFD 132

Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
           +M   G   + ++Y+++I  L R  K+  +   +L++ +  + I       N +I G+ K
Sbjct: 133 EMPLKGVVRNVVSYNILIAGLCRHGKLKDA--AQLFEAMRREGIHPSMVTFNLLIDGYGK 190

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
           AG  S A+ F    +  GL P   TY  +I     +     A   F ++KE  L P    
Sbjct: 191 AGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVT 250

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           Y  L+  + K   +  A  ++SEME++G+  D  +Y +L+ A    G+   AR + + M+
Sbjct: 251 YTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMD 310

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
               KPN+ +Y  ++ GY   G   +  +++ EM+ SG+ P+   Y + I          
Sbjct: 311 SKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQ 370

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLID 483
            A A    M   G++        L D
Sbjct: 371 EAEALIGDMEDAGLQTSESICRVLFD 396



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 14/230 (6%)

Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
           D  E +R F V+  +   GV P+   Y  +I  +          A    M   G+EP+  
Sbjct: 53  DVAEARRVFDVMPRL---GVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLY 109

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+N L+    + G +  A  LF+EM  +G      +YNI+I  L    + +D  +L   M
Sbjct: 110 TYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAM 169

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           R +G+ P++VT+  L+D YG++G+  +A+           + F  M+  GL+PS +  N 
Sbjct: 170 RREGIHPSMVTFNLLIDGYGKAGKMSNAL-----------HFFNQMKAAGLQPSVVTYNE 218

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
           LI  F   +  A A      MKE  L P  VTYT L+ A  + ++  + F
Sbjct: 219 LIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAF 268


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 228/520 (43%), Gaps = 68/520 (13%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS--LL 249
           T +T+  LI+A  ++  ++   +L  +M   G   D +  S ++  L R  K+  +  LL
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 250 QKLYKEIECDKIELDGQLLN--DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
           +++Y       + LD   ++   +I    K+G   +A          G+S        ++
Sbjct: 295 REMYN------MGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMM 348

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
             L  +G++ EAE +F+ + +  L P    Y ALL G+ K+G ++ AE V+ +ME+  VL
Sbjct: 349 DGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVL 408

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P+  T+S +I+ YA  G    A  VL++M   +  PN F+Y+ +L GY   G+ +     
Sbjct: 409 PNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGF 468

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
            KEMKS G+E +   ++++++   +   +  A +    +LS+GI  D   +++L+D +FK
Sbjct: 469 YKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFK 528

Query: 488 CGRYDRAEELFEEMQER----------------------------------GYFPCTTTY 513
            G    A  + +EM E+                                  G  P   TY
Sbjct: 529 EGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTY 588

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL-- 571
           N ++N    Q + E+   LL  M++ G++PN+VTY  L+    ++G  +  I  L  +  
Sbjct: 589 NSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLA 648

Query: 572 ----------------------SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
                                 +D  +   + +   GL  + +  N+LI          +
Sbjct: 649 VGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKK 708

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           A  VL  M   G+  D+VTY  L++         K F++Y
Sbjct: 709 ANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 130/576 (22%), Positives = 245/576 (42%), Gaps = 60/576 (10%)

Query: 124 VPA-PLWHSLLKNLCSSN--SSIDLAYAVVSWLQKHNLCYSYELLYSI--LIHALGRSEK 178
           VP+ PLW+ LL    +S   S + + Y+      +  LC     ++S+  L+H+L +   
Sbjct: 7   VPSLPLWNDLLYEFNASGFVSQVKVLYS------EMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 179 LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           L  A    +      +TYN ++    +    ++   L+S+M + G   D +  +++++  
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +   +  +  + +   +    + LD   LN ++ G+ + G  S+A+  +      G+ P
Sbjct: 121 CQIGLVQYA--EWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKP 178

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEEL------KESG---------------LKPRTKA 337
              TY  ++ A    G   +AE+V  E+       ESG               L+P    
Sbjct: 179 DIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVT 238

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
           +  L+  Y K   + D   +  +M  SGV+PD  T S ++      G+   A ++L+EM 
Sbjct: 239 WTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMY 298

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                PN   Y+ I++     G     F    +M   G+  D      M+D   K     
Sbjct: 299 NMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSK 358

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A   F  +L   + P+ +T+  L+D H K G  + AE + ++M++    P   T++ +I
Sbjct: 359 EAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSII 418

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR----------------- 560
           N   ++        +L  M    ++PNV  Y  L+D Y ++G+                 
Sbjct: 419 NGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLE 478

Query: 561 -----FDDAIECLE--GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
                FD  +  L+  G   +A +  + + + G+       +SL++ + ++  ++ A +V
Sbjct: 479 ENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSV 538

Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDKFH--KVFS 647
           +Q M E  ++ DVV Y  L K L+R+ K+    VFS
Sbjct: 539 VQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFS 574



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 173/375 (46%), Gaps = 3/375 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + ++ L++   R+  +++A +L+  +   G + D  NYS ++    +     ++L   + 
Sbjct: 482 IIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAAL--SVV 539

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +E+    ++ D    N +  G  + G       F  M + +GL+P   TY +V+      
Sbjct: 540 QEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIE-LGLTPDCVTYNSVMNTYFIQ 598

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G+T  A  +  E+K  G+ P    YN L+ G  K G ++    V+ EM   G +P    +
Sbjct: 599 GKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIH 658

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             L+ AY+ + + ++   + K++       N  +Y+ ++      G  ++   VL EM  
Sbjct: 659 KFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI 718

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+  D   YN +I  +   + +  A   + +ML  GI P+  T+N L++     G    
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A++L  EM+ERG  P  TTYNI+++  G      D  +L   M  +G +P   TY  L+ 
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQ 838

Query: 554 IYGQSGRFDDAIECL 568
            Y ++G+   A E L
Sbjct: 839 DYAKAGKMRQARELL 853



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 172/383 (44%), Gaps = 15/383 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YNAL     R    E   ++ S+M + G   D + Y+ V+ +     K +++L   L 
Sbjct: 552 VAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENAL--DLL 608

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++   +  +    N +I G  K G   K +  L     VG  P    +  ++ A S S
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRS 668

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +      + ++L + GL      YN L+    ++G  K A  V++EM   G+  D  TY
Sbjct: 669 RKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTY 728

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + LI  Y      E A     +M VS   PN   Y+ +L G    G  +   +++ EM+ 
Sbjct: 729 NALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE 788

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G+ P+   YN+++   G+      ++  +  M+++G  P T T+N LI  + K G+  +
Sbjct: 789 RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQ 848

Query: 494 AEELFEEMQERGYFPCTTTYNIMI------NLLGEQERW------EDVKRLLGNMRAQGL 541
           A EL  EM  RG  P ++TY+++I      +   E +R        + K+LL  M  +G 
Sbjct: 849 ARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGH 908

Query: 542 LPNVVTYTTLVDIYGQSGRFDDA 564
           +P+  T   +   +   G+ DDA
Sbjct: 909 VPSESTLMYISSNFSAPGKRDDA 931



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/460 (22%), Positives = 202/460 (43%), Gaps = 16/460 (3%)

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
           +++ + P  +T++++I+  A+   L KA+ ++ KM Q     +   Y++++    RT + 
Sbjct: 403 EKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQH 462

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           +++     YKE++   +E +  + + ++    ++G   +A   +      G+      Y+
Sbjct: 463 EAA--AGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYS 520

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
           +++      G    A +V +E+ E  ++    AYNAL KG +++G   + + V S M   
Sbjct: 521 SLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIEL 579

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           G+ PD  TY+ +++ Y   G+ E+A  +L EM+     PN   Y+ ++ G    G  ++ 
Sbjct: 580 GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKV 639

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             VL EM + G  P    +  ++  + +       +    +++  G+  + + +NTLI  
Sbjct: 640 ISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITV 699

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             + G   +A  +  EM  +G      TYN +I         E        M   G+ PN
Sbjct: 700 LCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPN 759

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
           + TY  L++    +G   DA        D+ V+    MR  GL P+    N L++  G  
Sbjct: 760 ITTYNALLEGLSTNGLMRDA--------DKLVSE---MRERGLVPNATTYNILVSGHGRV 808

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
               ++  +   M   G  P   TY  L++   +  K  +
Sbjct: 809 GNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQ 848



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 37/338 (10%)

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L P    +N LL  +   G++   + + SEM   GV+P+  + +LL+ +    G    A 
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
             L+     H   N+ ++     G+  RG   + F +L EM   GV  D+   N+++  +
Sbjct: 66  GYLRNSVFDHVTYNTVVW-----GFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +   + +A      ++  G+  D I  NTL+D + + G   RA +L E+  + G  P  
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 511 TTYNIMINLL---GEQERWED-VKRLLGNMR-----------------AQGLLPNVVTYT 549
            TYN ++N     G+  + E  V  +LG  R                  + L P VVT+T
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL+  Y +    DD     E            M   G+ P  +  +S++       +  E
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQ-----------MIMSGVMPDVVTCSSILYGLCRHGKLTE 289

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           A  +L+ M   GL P+ V+YTT++ AL++  +  + F+
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFN 327



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 43/281 (15%)

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           P+  +++ +L  +   G   +   +  EM   GV P+    N+++ +  K   L  A+  
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
               +      D +T+NT++    K G  D+   L  EM ++G    + T NI++    +
Sbjct: 68  LRNSVF-----DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
               +  + ++GN+   G+  + +   TLVD Y           C  GL  +A++     
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGY-----------CEVGLVSRALDLVEDG 171

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM------KENG--------------- 621
             +G+KP  +  N+L+NAF +    A+A +V+  +       E+G               
Sbjct: 172 WKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRD 231

Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
           L+P VVT+TTL+ A  +    H+      FF++Y+ +  SG
Sbjct: 232 LQPTVVTWTTLIAAYCK----HRGIDD--FFSLYEQMIMSG 266


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 11/339 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P   TY  +I A        +A  + +E+   G KP    YN L+ G  K G L +A   
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           ++ M   G  P+  T+++++ +  + GRW  A  +L EM      P+   ++ ++     
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
           +G   R   +L++M + G  P++  YN ++  F K   +  A+   + M+S G  PD +T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NT++    K G+ D A EL  ++  +G  P   TYN +I+ L +  + +    LL  MR
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +GL P+V+TY++L+    + G+ ++AI+            F  +   G+KP+    NS+
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIK-----------FFHDVEGFGVKPNAFTYNSI 302

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +    + Q+   A   L YM   G KP  V+YT L++ +
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 11/342 (3%)

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +AM+ L      G  P   TY  ++  +   GR  EA      +   G +P    +N 
Sbjct: 32  VGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNI 91

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           +L+     G   DAE +++EM R G  P   T+++LI+     G    A  +L++M    
Sbjct: 92  ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG 151

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             PNS  Y+ +L G+    +  R  Q L+ M S G  PD   YN M+    K   +  A+
Sbjct: 152 CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAV 211

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
              +++ S+G  P  IT+NT+ID   K G+ D+A EL  EM+ +G  P   TY+ +I  L
Sbjct: 212 ELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGL 271

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             + + E+  +   ++   G+ PN  TY ++  ++G          C    +D+A++   
Sbjct: 272 SREGKVEEAIKFFHDVEGFGVKPNAFTYNSI--MFGL---------CKAQQTDRAIDFLA 320

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
            M + G KP+ ++   LI     +    EA  +L  +   G+
Sbjct: 321 YMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 13/321 (4%)

Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
           P    Y  L++       +  A  ++ EM   G  PD  TY++L++     GR + A   
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
           L  M    ++PN   ++ IL      G W    ++L EM   G  P    +N++I+   +
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
              L  A+   ++M + G  P+++++N L+    K  + DRA +  E M  RG +P   T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN M+  L +  + +    LL  + ++G  P ++TY T++D   + G+           +
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK-----------T 242

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           DQAV     MR  GLKP  +  +SLI     + +  EA      ++  G+KP+  TY ++
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 633 MKALIRVDKFHKV--FSSYLF 651
           M  L +  +  +   F +Y+ 
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMI 323



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 2/350 (0%)

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D I Y+++I++    + +  ++  KL  E+     + D    N ++ G  K G   +A++
Sbjct: 15  DVITYTILIEATCAESGVGQAM--KLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
           FL      G  P   T+  ++ ++ ++GR ++AE +  E+   G  P    +N L+    
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           + G L  A  ++ +M   G  P+  +Y+ L+  +    + + A   L+ M      P+  
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            Y+ +L      G+     ++L ++ S G  P    YN +ID   K      A+     M
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEM 252

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
             +G++PD IT+++LI    + G+ + A + F +++  G  P   TYN ++  L + ++ 
Sbjct: 253 RGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +     L  M ++G  P  V+YT L++     G   +A+E L  L  + V
Sbjct: 313 DRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 155/349 (44%), Gaps = 2/349 (0%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           +TY  LI A      + +A+ L+ +M   G   D + Y++++  + +  ++D ++  K  
Sbjct: 17  ITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI--KFL 74

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
             +     + +    N ++      G    A + L      G SP   T+  +I  L   
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A  + E++   G  P + +YN LL G+ K   +  A   +  M   G  PD  TY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           + ++ A    G+ ++A  +L ++      P    Y+ ++ G    G+  +  ++L EM+ 
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            G++PD   Y+ +I    +   +  A+  F  +   G++P+  T+N+++    K  + DR
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
           A +    M  +G  P   +Y I+I  +  +   ++   LL  + ++G++
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 165/368 (44%), Gaps = 11/368 (2%)

Query: 159 CYSYELLYSILIHA------LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKA 212
           CY   + Y+ILI A      +G++ KL +  + S+  +   +TYN L++   +   L++A
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDE-MGSRGCKPDVVTYNVLVNGMCKEGRLDEA 70

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNK-IDSSLLQKLYKEIECDKIELDGQLLNDV 271
           +  ++ M   G   + I ++++++S+  T + +D+   +KL  E+            N +
Sbjct: 71  IKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDA---EKLLTEMVRKGCSPSVVTFNIL 127

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           I    + G   +A+  L      G +P + +Y  ++       +   A    E +   G 
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGC 187

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
            P    YN +L    K G +  A  +++++   G  P   TY+ +ID  +  G+ + A  
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +L EM     KP+   YS ++AG    G+ +   +   +++  GV+P+   YN ++    
Sbjct: 248 LLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLC 307

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K      A+     M+S+G +P  +++  LI+     G    A EL  E+  RG    ++
Sbjct: 308 KAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSS 367

Query: 512 TYNIMINL 519
              +++ L
Sbjct: 368 AEQVVVRL 375


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 214/527 (40%), Gaps = 61/527 (11%)

Query: 147 YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALIS 201
           + ++  + ++ +C    +  S +I  LG ++ + +A  +      ++ + T   YN++I 
Sbjct: 139 WKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMII 198

Query: 202 ACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
                   EK   L ++M  +G HC  D + YS +I +                      
Sbjct: 199 MLMHEGQYEKVHELYNEMSNEG-HCFPDTVTYSALISA---------------------- 235

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
                          F K G    A+R L   +  G+ P    Y  +I           A
Sbjct: 236 ---------------FCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +FEE++    +P    Y  L++G  K G   +A     EM R G  PD    + +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEP 438
              AGR + A  + +EM      P+   Y+ I+ A +  +          + MK SG+ P
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               Y+++ID F K N    AM   + M  +G  P    + +LID   K  RYD A ELF
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +E++E         Y +MI  LG+  R +D   L   M   G  PNV  Y  L+    ++
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARA 520

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                      G+ D+A+   R M+  G  P   + N ++N   +      A  +L  MK
Sbjct: 521 -----------GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 569

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI----YKMLSYS 661
           ++ +KPD V+Y T++ A+     F +        N+    Y +++YS
Sbjct: 570 QSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYS 616



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 182/408 (44%), Gaps = 14/408 (3%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
           C+   + YS LI A   LGR +         +   + P    Y  LI+   + +++  AL
Sbjct: 222 CFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGAL 281

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
            L  +MR      D   Y+ +I+ L +  + D +     + E+  +    D  ++N++I 
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAY--NFFHEMRREGCRPDTVVINNMIN 339

Query: 274 GFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKES 329
              KAG   DA K    +G  Q +   P   TY  +I AL  S  R  E  + FE +K S
Sbjct: 340 FLGKAGRLDDAVKLFEEMGTLQCI---PSVVTYNTIIKALFESKSRISEISSWFERMKGS 396

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G+ P    Y+ L+ G+ K    + A  ++ EM+  G  P    Y  LIDA   A R++ A
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIA 456

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             + +E++ +    ++ +Y+ ++      G       +  EM   G  P+ + YN ++  
Sbjct: 457 HELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSG 516

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             +   L  A+    RM   G  PD  ++N +++   K G   RA E+   M++    P 
Sbjct: 517 LARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPD 576

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
             +YN ++  +     +E+  +L+  M   G   +++TY+++++  G+
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 43/231 (18%)

Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
           P P  +  L +        D+A+ +   L K N   S   +Y+++I  LG++ +L +A  
Sbjct: 435 PCPAAYCSLIDALGKAKRYDIAHELFQEL-KENCGSSSARVYAVMIKHLGKAGRLDDAVN 493

Query: 184 LLSQRQRL--TP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
           L  +  +L  TP    YNAL+S  AR   L++AL  M +M++ G   D  +Y++++    
Sbjct: 494 LFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILN--- 550

Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
                                             G AK G   +AM  L   +   + P 
Sbjct: 551 ----------------------------------GLAKTGGPHRAMEMLSNMKQSAIKPD 576

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
             +Y  V+ A+S++G   EA  + +E+   G +     Y+++L+   K+ +
Sbjct: 577 AVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 8/333 (2%)

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             T+  VI  L   G+  +A  V E++K  G  P    YN ++ GY K G +  A+ ++ 
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
           EM    + P+E T+++LID +       +A+ V +EM+    +PN   Y+ ++ G    G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           +      +  +M   G++P+   YN +I+ F K   L  A    D +   G+ P+ IT+N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           TLID + K GR D A  L   M + G  P  +TYN +I     +   ++ ++L   M   
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
           GL  ++VTY  LVD   + G    A+  L+ ++        +M   G + + +  N LI 
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMT--------LMEKKGRRANIVTYNVLIK 520

Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            F    +  EA  +L  M E GL P+  TY  L
Sbjct: 521 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 13/317 (4%)

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           F+   + G +    + N +L   VK G +   E V  EM R  +  +  T+ ++I+    
Sbjct: 182 FDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCK 241

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G+++ A  V+++M+     P+   Y+ I+ GY   G+  +   +LKEM +  + P+   
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           +N++ID F +   +  A   F+ M  +G++P+ +T+N+LI+     G+ D A  L ++M 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
             G  P   TYN +IN   +++  ++ + +L ++  +GL PNV+T+ TL+D YG++GR D
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 563 DAIECLEGLSDQAVNAFRVMRTD-GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           DA               R M  D G+ P+    N LI  F  +    EA  + + M+ NG
Sbjct: 422 DAF------------LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 622 LKPDVVTYTTLMKALIR 638
           LK D+VTY  L+ AL +
Sbjct: 470 LKADLVTYNILVDALCK 486



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           +G  E +Y+  ++ +R  +  +T++ +I+   +    +KA +++  M+  G+    I Y+
Sbjct: 210 IGVVESVYKE-MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
            +I    +  K+  +    L KE+   +I  +    N +I GF +  + + A +     Q
Sbjct: 269 TIIDGYCKAGKMFKA--DALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P   TY ++I  L ++G+  EA  + +++   GLKP    YNAL+ G+ K   LK
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A  ++ ++ + G+ P+  T++ LIDAY  AGR + A ++   M  +   PN   Y+ ++
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML---SE 469
            G+   G  +   ++ KEM+ +G++ D   YN+++D   K      A+   D M     +
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKK 506

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G   + +T+N LI      G+ + A  L  EM E+G  P  TTY+I+ + + E+    D+
Sbjct: 507 GRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDI 566

Query: 530 KRLLGNM 536
              L N+
Sbjct: 567 DGHLYNV 573



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 11/220 (5%)

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           V KEM    +  +   ++V+I+   K      A    + M + G  P  IT+NT+ID + 
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K G+  +A+ L +EM  +   P   T+NI+I+     E     K++   M+ QGL PNVV
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY +L++    +G+ D+A+    GL D+       M   GLKP+ +  N+LIN F + + 
Sbjct: 336 TYNSLINGLCSNGKLDEAL----GLQDK-------MSGMGLKPNVVTYNALINGFCKKKM 384

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
             EA  +L  + + GL P+V+T+ TL+ A  +  +    F
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 15/273 (5%)

Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
           R  P  +  ++L +    + ++  A  V   +Q+  L     + Y+ LI+ L  + KL E
Sbjct: 294 RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL-QPNVVTYNSLINGLCSNGKLDE 352

Query: 182 AFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
           A  L  +     L P  +TYNALI+   +   L++A  ++  + + G   + I ++ +I 
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 237 SLTRTNKIDSSLLQK--LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
           +  +  ++D + L +  +     C  +       N +IVGF + G+  +A +     +G 
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNV----STYNCLIVGFCREGNVKEARKLAKEMEGN 468

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEEL---KESGLKPRTKAYNALLKGYVKMGYL 351
           GL     TY  ++ AL   G T +A  + +E+   ++ G +     YN L+KG+   G L
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           ++A  +++EM   G++P+  TY +L D     G
Sbjct: 529 EEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 208/455 (45%), Gaps = 18/455 (3%)

Query: 195 TYNALI-SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           ++N +I S C R + LE A ++   M + G+  D   Y  +++ L +   +  +    +Y
Sbjct: 457 SFNCIIDSYCQRGNVLE-AFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 515

Query: 254 K-EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
             E  C    +D + LN ++VG  K G   +A+          + P T TY  ++     
Sbjct: 516 LLEKAC---AIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCK 572

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME-RSGVLPDEH 371
            G+ + A  + + + E GL P T AY  LL G V  G +K A ++  E+  + G+  D  
Sbjct: 573 RGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCI 632

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
            Y+ +++ Y   G+      +++ M  +   P+S  Y+ ++ GY  +G+  RT  + ++M
Sbjct: 633 AYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDM 692

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G++PD   Y ++I    +Y  +  A+   ++M+ EG+ PD + ++ LI    +  + 
Sbjct: 693 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKM 752

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A +LF  M+     P + TY  M+N L  +   +    +L +M   GL P    Y  L
Sbjct: 753 SNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIAL 812

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           ++   + G  D A E  E            M+  G+ PS +A +S++    +  +  EA 
Sbjct: 813 INAKCRVGDIDGAFELKED-----------MKALGVVPSEVAESSIVRGLCKCGKVEEAI 861

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
            V   +   G+ P + T+TTLM  L +  K    F
Sbjct: 862 IVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 896



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 33/494 (6%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I+I  L + ++   A+LL +R R   LTP   +YN LI        +  A+ + ++M 
Sbjct: 302 YNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQML 361

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS---LLQKLYKEIECDKIELDGQLLN-------- 269
           +         Y+ +I    R  + D +   L +     +   ++    Q+L         
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGID 421

Query: 270 -DVIV--GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
            DVI        G  ++A +F      + +S   A++  +I +    G  +EA +V++ +
Sbjct: 422 PDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNM 481

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
              G  P    Y +LL+G  + G+L  A EF+V  +E++  + DE T + L+      G 
Sbjct: 482 VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI-DEKTLNTLLVGICKHGT 540

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  + ++M   +  P+++ Y+ +L G+  RG+      +L+ M   G+ PDT  Y  
Sbjct: 541 LDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC 600

Query: 446 MIDTFGKYNCLHHAMAAFDRMLS-EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           +++       +  A   F  ++  EG+  D I +N++++ + K G+ +  E L   M E 
Sbjct: 601 LLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHEN 660

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
             +P + +YNI+++   ++ +      L  +M  +G+ P+ VTY  L  I+G        
Sbjct: 661 EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL--IFGL------- 711

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
             C  GL + AV     M  +G+ P NLA + LI AF E  + + A  +  YMK   + P
Sbjct: 712 --CEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSP 769

Query: 625 DVVTYTTLMKALIR 638
              TY  ++  LIR
Sbjct: 770 SSKTYVAMVNGLIR 783



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 207/480 (43%), Gaps = 25/480 (5%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y  L+  L +   L +A     +LL +   +   T N L+    ++  L++AL+L  KM 
Sbjct: 493 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMV 552

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLL---QKLYKEIECDKIELDGQLLNDVIVGFAK 277
                 D   Y++++    +  K+  +L+     L K +  D I     LLN    G   
Sbjct: 553 TRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC-LLN----GLVN 607

Query: 278 AGDASKA-MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
            G    A   F  +    GL      Y +++      G+  E E +   + E+ + P + 
Sbjct: 608 EGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSA 667

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
           +YN L+ GY+K G L    ++  +M + G+ PD  TY LLI      G  E A   L++M
Sbjct: 668 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
            +    P++  +  ++  + ++ +     Q+   MK   + P +  Y  M++   + N L
Sbjct: 728 VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWL 787

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             +      M+  G++P    +  LI+   + G  D A EL E+M+  G  P     + +
Sbjct: 788 QQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSI 847

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +  L +  + E+   +  ++   G++P + T+TTL+    +  + DDA            
Sbjct: 848 VRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF----------- 896

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +  ++M + GLK   +  N LI      +   +A  + + MK  GL P++ TY TL  A+
Sbjct: 897 HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAM 956



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/454 (22%), Positives = 190/454 (41%), Gaps = 67/454 (14%)

Query: 227 DFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLL-NDVIVGFAKAGDASK 283
           D    ++V+ SL    K+    S+LQK+          L   +  N ++  + K G    
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKM------KNCRLPNAVTYNTILNWYVKKGRCKS 282

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A+R L   +  G+     TY  +I  L    R+  A  + + ++E  L P   +YN L+ 
Sbjct: 283 ALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIH 342

Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
           G+   G +  A ++ ++M R  + P   TY+ LID Y   GR + AR VL EM+++  +P
Sbjct: 343 GFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRP 402

Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY-------------------- 443
                           E  +  Q+LK M + G++PD   Y                    
Sbjct: 403 R---------------EVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMS 447

Query: 444 -----------NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
                      N +ID++ +   +  A + +D M+  G  PD  T+ +L+    + G   
Sbjct: 448 RMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLV 507

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A+E    + E+       T N ++  + +    ++   L   M  + +LP+  TYT L+
Sbjct: 508 QAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 567

Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF-GEDQRDAEAF 611
           D + + G+   A+  L+           +M   GL P  +A   L+N    E Q  A ++
Sbjct: 568 DGFCKRGKVVPALILLQ-----------MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 616

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
              + + + GL  D + Y ++M   ++  + +++
Sbjct: 617 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 650



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/489 (21%), Positives = 209/489 (42%), Gaps = 45/489 (9%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
           + SLL+ LC     +     +V  L+K   C   E   + L+  + +   L EA  L ++
Sbjct: 493 YGSLLRGLCQGGHLVQAKEFMVYLLEKA--CAIDEKTLNTLLVGICKHGTLDEALDLCEK 550

Query: 189 ---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              + + P   TY  L+    +   +  AL L+  M + G   D I Y+ ++  L    +
Sbjct: 551 MVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQ 610

Query: 244 IDSSLLQKLYKEIEC-DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
           + ++    +++EI C + +  D    N ++ G+ K G  ++  R +       + P +A+
Sbjct: 611 VKAA--SYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 668

Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
           Y  ++      G+      ++ ++ + G+KP    Y  L+ G  + G ++ A   + +M 
Sbjct: 669 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 728

Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
             GV PD   + +LI A++   +  +A  +   M+  H  P+S  Y  ++ G   +   Q
Sbjct: 729 LEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQ 788

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +++++L +M  SG++P    Y  +I+   +   +  A    + M + G+ P  +  ++++
Sbjct: 789 QSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIV 848

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFP------------------------------C--- 509
               KCG+ + A  +F  +   G  P                              C   
Sbjct: 849 RGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLK 908

Query: 510 --TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               TYN++I  L  ++   D   L   M+++GLLPN+ TY TL      +G   D  + 
Sbjct: 909 VDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKL 968

Query: 568 LEGLSDQAV 576
           L+ + D+ +
Sbjct: 969 LKDIEDRGI 977



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 147/314 (46%), Gaps = 2/314 (0%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           +YN L+    +   L + L L   M ++G   D + Y L+I  L     I+ ++  K  +
Sbjct: 668 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAV--KFLE 725

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  + +  D    + +I  F++    S A++     + + +SP + TY A++  L    
Sbjct: 726 KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKN 785

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              ++  +  ++ ESGL+P+   Y AL+    ++G +  A  +  +M+  GV+P E   S
Sbjct: 786 WLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAES 845

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            ++      G+ E A IV   +  +   P    ++ ++ G     +    F + + M+S 
Sbjct: 846 SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESC 905

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++ D   YNV+I       C+  A+  ++ M S+G+ P+  T+ TL    +  G     
Sbjct: 906 GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDG 965

Query: 495 EELFEEMQERGYFP 508
           E+L +++++RG  P
Sbjct: 966 EKLLKDIEDRGIVP 979



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 154/353 (43%), Gaps = 36/353 (10%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ A    G+ ++A A    + E G K    + N +L   V +   +     + E     
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
              D  T ++++++    G+   A  +L++M+     PN+  Y+ IL  Y  +G  +   
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSAL 284

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L +M+ +G+E D + YN+MID   K      A     RM    + PD  ++NTLI   
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR-------- 537
           F  G+ + A  +F +M  +   P   TY  +I+      R ++ +R+L  M+        
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPRE 404

Query: 538 ------------AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
                       A G+ P+V+TY+ L++               EG+  +A    + M   
Sbjct: 405 VSKAKQILKCMLADGIDPDVITYSALIN---------------EGMIAEAEQFKQYMSRM 449

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            +     + N +I+++ +     EAF+V   M  +G  PD+ TY +L++ L +
Sbjct: 450 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 502



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 163/353 (46%), Gaps = 6/353 (1%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           + YN++++   +   + +   LM  M ++  +    +Y++++    +  ++  +L   LY
Sbjct: 632 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY--LY 689

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
           +++  + I+ D      +I G  + G    A++FL      G+ P    +  +I A S  
Sbjct: 690 RDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEK 749

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
            +   A  +F  +K   + P +K Y A++ G ++  +L+ +  ++ +M  SG+ P    Y
Sbjct: 750 SKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHY 809

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
             LI+A    G  + A  + ++M+     P+    S I+ G    G+ +    V   +  
Sbjct: 810 IALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMR 869

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID--CHFKCGRY 491
           +G+ P    +  ++    K   +  A      M S G++ D +T+N LI   C+ KC   
Sbjct: 870 AGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKC--I 927

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             A +L+EEM+ +G  P  TTY  +   +      +D ++LL ++  +G++P+
Sbjct: 928 CDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 155/371 (41%), Gaps = 51/371 (13%)

Query: 284 AMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           A+R L  + Q  GL   T  Y   +  L  +    +A +V   L  +G    +  +++LL
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSC-SAIFSSLL 149

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           +              +S  + + +     +  LL++AY   G+   A   +  M+    K
Sbjct: 150 R-------------TISRCDPTNLF----SVDLLVNAYVKEGKVLDAAAAIFFMDECGFK 192

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
            + F  + IL       + +  +  LKE        D    N+++++      L  A + 
Sbjct: 193 ASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESM 252

Query: 463 FDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
             +M +  + P+ +T+NT+++ + K GR   A  + ++M++ G      TYNIMI+ L +
Sbjct: 253 LQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCK 311

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
            +R      LL  MR   L P+  +Y TL  I+G  G         EG  + A+  F  M
Sbjct: 312 LKRSARAYLLLKRMREVNLTPDECSYNTL--IHGFFG---------EGKINLAIYIFNQM 360

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAV--------------------LQYMKENGL 622
               LKPS     +LI+ +  + R  EA  V                    L+ M  +G+
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGI 420

Query: 623 KPDVVTYTTLM 633
            PDV+TY+ L+
Sbjct: 421 DPDVITYSALI 431


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 10/337 (2%)

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           I  L  +    +AEA+ EE+K +G  P  +++  L++G+ K G  +     +  M  +G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
            P+   Y+ LI     AG    A   LK M   H  PN   Y+ I+ GY      ++   
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
            L+EM+  G  P  H Y+ ++ +F K   +  AM  F  M ++G EPD + +N L+   +
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           +  +   A ELF  M  RG  P   TYN MI  L + ++ ++   LL  M+ + + P  V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TYTTL+D   +  R   A E  E +++              +P+   L  LIN   + +R
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPC--------TEPAYSVL-ILINGLCKARR 290

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             EA  + Q M+  G+ P VVTY TL++ L+   K  
Sbjct: 291 PGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQ 327



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 177/428 (41%), Gaps = 64/428 (14%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I GF K+G   +    L      GL P    Y  +I+ L  +G   EAE+  + + +  
Sbjct: 35  LIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH- 93

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P   +YN ++ GY K   ++ A   + EME  G  P  H YS ++ ++   G    A 
Sbjct: 94  CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 153

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            V  EM     +P+   ++ +L+G     +     ++ + M S G +PD   YN MI   
Sbjct: 154 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            K+  L  A+   +RM  E + P  +T+ TLID   K  R  +A E+FE+M E G  PCT
Sbjct: 214 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE-GPCPCT 272

Query: 511 T---TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
               +  I+IN L +  R  + K +   MR +G+ P VVTY TL++    + +  DA+E 
Sbjct: 273 EPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL 332

Query: 568 LEGL---------------------SDQAVNAFRV---MRTDGLKPSNLALNSLINAFGE 603
              +                     +DQ   AF++   MR  G  PS      L++    
Sbjct: 333 TYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 392

Query: 604 DQRDAEAFAV-----------------------------------LQYMKENGLKPDVVT 628
             R  +AF +                                   L+ M + G+ PD  T
Sbjct: 393 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 452

Query: 629 YTTLMKAL 636
           Y  L+  L
Sbjct: 453 YDKLVVGL 460



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 166/390 (42%), Gaps = 15/390 (3%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
           + YN LIS   +   L +A + + +M Q   HC  + ++Y+++I    +   I+ +L   
Sbjct: 65  ILYNNLISCLCKAGMLAEAESYLKRMPQ---HCAPNVVSYNIIIDGYCKARNIEKAL--A 119

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
             +E+E           + ++  F K G+ SKAM         G  P    +  +++ L 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            + +  EA  +F  +   G KP    YN ++ G  K   L +A F++  M++  V P   
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI-----LAGYRDRGEWQRTFQ 426
           TY+ LID      R + A  V ++M           YS +     L   R  GE +  FQ
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
              EM+  G+ P    YN +++       L  AM     ML +   P+  T+  LI    
Sbjct: 300 ---EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLC 356

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           K  + + A +L   M+++G+ P    + ++++ L    R +D   L   M        V 
Sbjct: 357 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 416

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +   L+D   + G  D+A + L+ ++D  +
Sbjct: 417 SSNILLDGILRRGSVDEAKDFLKQMTDTGI 446



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 172/414 (41%), Gaps = 8/414 (1%)

Query: 164 LLYSILIHALGRSEKLYEA--FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
           +LY+ LI  L ++  L EA  +L    Q   P  ++YN +I    +  ++EKAL  + +M
Sbjct: 65  ILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
            + G+      YS ++QS  +T  +  ++   ++ E+     E D    N ++ G  +A 
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAM--DVFAEMPAKGCEPDIVNFNVLLSGLWRAR 182

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
              +A          G  P   TY  +I  L    +  EA  + E +K+  + P    Y 
Sbjct: 183 KIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYT 242

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS--LLIDAYANAGRWESARIVLKEME 397
            L+    K   L+ A  V  +M        E  YS  +LI+    A R   A+ + +EM 
Sbjct: 243 TLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMR 302

Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
                P    Y+ +L G     + Q   ++   M      P+   Y ++I +  K + + 
Sbjct: 303 GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVE 362

Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
            A      M  +G  P    W  L+    + GR D A EL++EM          + NI++
Sbjct: 363 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILL 422

Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           + +  +   ++ K  L  M   G++P+  TY  LV      G+ D A + +E L
Sbjct: 423 DGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 188/422 (44%), Gaps = 12/422 (2%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-L 184
           A L+++L+  LC +    + A + +  + +H  C    + Y+I+I    ++  + +A   
Sbjct: 64  AILYNNLISCLCKAGMLAE-AESYLKRMPQH--CAPNVVSYNIIIDGYCKARNIEKALAF 120

Query: 185 LSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           L + + L    TP  Y++++ +  +  ++ KA+++ ++M   G   D +N+++++  L R
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 180

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
             KI  +  ++L++ +     + D    N +I G  K     +A+  L   +   +SP  
Sbjct: 181 ARKIHEA--RELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF 238

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL--KGYVKMGYLKDAEFVV 358
            TY  +I  L    R  +A  VFE++ E        AY+ L+   G  K     +A+ + 
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMF 298

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            EM   G+ P   TY+ L++   +  + + A  +   M      PN F Y  +++     
Sbjct: 299 QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT 358

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            + +  F++L  M+  G  P    + V++    +   L  A   +  M     +    + 
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS 418

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N L+D   + G  D A++  ++M + G  P   TY+ ++  L  Q + +  ++L+  +  
Sbjct: 419 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 478

Query: 539 QG 540
            G
Sbjct: 479 DG 480



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 12/261 (4%)

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +++EM+ +   P+   +  ++ G+   G +QR    L  M  +G+ P+   YN +I 
Sbjct: 13  AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A +   RM  +   P+ +++N +ID + K    ++A     EM+E G+ P
Sbjct: 73  CLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP 131

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
               Y+ ++    +         +   M A+G  P++V +  L+    ++ +  +A E  
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE-- 189

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     FR M + G KP  +  N++I    + ++  EA  +L+ MK+  + P  VT
Sbjct: 190 ---------LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 240

Query: 629 YTTLMKALIRVDKFHKVFSSY 649
           YTTL+  L +  +  + +  +
Sbjct: 241 YTTLIDHLCKFARLQQAYEVF 261


>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 808

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 176/345 (51%), Gaps = 13/345 (3%)

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
           +T  Y  +I   +    T +A  +F E++E   KP ++ YNAL+  + + G  + A  ++
Sbjct: 142 RTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIM 201

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
            +M R  + P   TY+ LI+A  ++G W  A  V K+M  +   P+   ++ +L+ Y+  
Sbjct: 202 EDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTG 261

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE--PDTI 476
            ++ +     + MK + + PDT   N++I    K      A+  F+ M  +  E  PD +
Sbjct: 262 AQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIV 321

Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
           T+ ++I  +   G+ +  + +F  M   G  P   +YN +I         E+   +   +
Sbjct: 322 TFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKI 381

Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
           +A GLLP+VV+YT+L+  YG+S +   A E            F +M+   LKP+ ++ N+
Sbjct: 382 KASGLLPDVVSYTSLLSSYGRSKQPKKARE-----------MFNMMKKAKLKPNVVSFNA 430

Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           LI+A+G +   A+A  VL+ M+++G+ P++VT  TL+ A  R  +
Sbjct: 431 LIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQ 475



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/530 (21%), Positives = 234/530 (44%), Gaps = 38/530 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---------------CYSYELLYSILIHAL 173
           W  L KN C+     D+   ++    +HNL               C      Y+ LI+A 
Sbjct: 132 WMKLQKNYCART---DMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAH 188

Query: 174 GRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
           GR+ +   A  + +   R+ + P   TYN LI+AC  + +  +AL +  +M ++G   D 
Sbjct: 189 GRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDL 248

Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
           + +++V+ +     +   +L    ++ ++   I  D    N VI    K G   KA+   
Sbjct: 249 VTHNIVLSAYKTGAQYSKAL--SYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIF 306

Query: 289 G--MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                +     P   T+ ++I   S SG+    +AVF  +   GL P   +YNAL+  Y 
Sbjct: 307 NSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYA 366

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
             G  ++A  V  +++ SG+LPD  +Y+ L+ +Y  + + + AR +   M+ +  KPN  
Sbjct: 367 FHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVV 426

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
            ++ ++  Y   G      +VL+EM+  G+ P+      ++   G+     +  A     
Sbjct: 427 SFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAA 486

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
              GI+ +T+  N+ I  +   G Y++A  L+  M++    P + TY ++I+   +  ++
Sbjct: 487 KMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKY 546

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
                   +M    +       ++++  Y + G+  +           A + F +M+  G
Sbjct: 547 GKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITE-----------AESIFTMMKMAG 595

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             P  +   ++++A+   +   +A  ++Q M++  ++ D +  + LM+A 
Sbjct: 596 CCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAF 645



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 192/416 (46%), Gaps = 15/416 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+++I+   R N  D +  + L+ E++  + + D +  N +I    +AG    AM  +  
Sbjct: 146 YNMMIRLHARHNLTDQA--RGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMED 203

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
                + P  +TY  +I A  +SG   EA  V +++ E+G+ P    +N +L  Y     
Sbjct: 204 MLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQ 263

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA--KPNSFIY 408
              A      M+ + + PD  T +++I      G+ E A  +   M    A  +P+   +
Sbjct: 264 YSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTF 323

Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
           + I+  Y   G+ +    V   M + G+ P    YN +I  +  +     A++ F ++ +
Sbjct: 324 TSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKA 383

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
            G+ PD +++ +L+  + +  +  +A E+F  M++    P   ++N +I+  G      D
Sbjct: 384 SGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLAD 443

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
             ++L  M   G+ PN+VT  TL+   G+ G         + ++  AV +   MR  G+K
Sbjct: 444 AVKVLREMEQDGIHPNIVTICTLLAACGRCG---------QKVNIDAVLSAAKMR--GIK 492

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            + +A NS I ++       +A A+   M++  + P+ VTYT L+    ++ K+ K
Sbjct: 493 LNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGK 548



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 166/354 (46%), Gaps = 13/354 (3%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P + TY A+I A   +G+   A  + E++    + P    YN L+      G  ++A  V
Sbjct: 176 PDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKV 235

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
             +M  +GV PD  T+++++ AY    ++  A    + M+ ++ +P++   + ++     
Sbjct: 236 SKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVK 295

Query: 418 RGEWQRTFQVLKEMKSSGVE--PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
            G+ ++   +   M+    E  PD   +  +I  +     + +  A F  ML+EG+ P  
Sbjct: 296 LGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTI 355

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           +++N LI  +   G  + A  +F++++  G  P   +Y  +++  G  ++ +  + +   
Sbjct: 356 VSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNM 415

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           M+   L PNVV++  L+D YG +G   DA++ L           R M  DG+ P+ + + 
Sbjct: 416 MKKAKLKPNVVSFNALIDAYGSNGLLADAVKVL-----------REMEQDGIHPNIVTIC 464

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           +L+ A G   +     AVL   K  G+K + V   + + + + V ++ K  + Y
Sbjct: 465 TLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALY 518



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/476 (21%), Positives = 203/476 (42%), Gaps = 28/476 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKL 252
           T N +I    +    EKA+++ + MR+    C  D + ++ +I   + + ++++   + +
Sbjct: 285 TRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENC--KAV 342

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
           +  +  + +       N +I  +A  G + +A+      +  GL P   +Y +++++   
Sbjct: 343 FSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGR 402

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           S +  +A  +F  +K++ LKP   ++NAL+  Y   G L DA  V+ EME+ G+ P+  T
Sbjct: 403 SKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVT 462

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
              L+ A    G+  +   VL   ++   K N+   +  +  Y + GE+++   +   M+
Sbjct: 463 ICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMR 522

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
              V P++  Y V+I    K +    A+  F  M+   I       +++I  + K G+  
Sbjct: 523 KMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQIT 582

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
            AE +F  M+  G  P   T+  M++     E W     L+  M    +  + +  + L+
Sbjct: 583 EAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALM 642

Query: 553 DIYGQSGR-----------------FDDAI--ECLEGLS-----DQAVNAFRVMRTDGLK 588
             + + G                  F DAI  E +   S        +N  ++M      
Sbjct: 643 RAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSV 702

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            S   LN L++  G   +      +   +  +G + +  TY+ ++K L+ V  + K
Sbjct: 703 VSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRK 758



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/465 (21%), Positives = 199/465 (42%), Gaps = 29/465 (6%)

Query: 174 GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
           G+ E     F     + LTP  ++YNALI A A +   E+AL++  K++  G   D ++Y
Sbjct: 334 GQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSY 393

Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
           + ++ S  R+ +   +  ++++  ++  K++ +    N +I  +   G  + A++ L   
Sbjct: 394 TSLLSSYGRSKQPKKA--REMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREM 451

Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
           +  G+ P   T   ++ A    G+ +  +AV    K  G+K  T A N+ +  Y+ +G  
Sbjct: 452 EQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEY 511

Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
           + A  + + M +  V P+  TY++LI       ++  A     +M          + S +
Sbjct: 512 EKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSV 571

Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD---RMLS 468
           +  Y  +G+      +   MK +G  PD   +  M+     YN   H   A D    M  
Sbjct: 572 ICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHA---YNAGEHWGKACDLIQEMED 628

Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
             I+ DTI  + L+    K G   +   L E M+E+        +  M++       W  
Sbjct: 629 YDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRT 688

Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV----NAFRVMRT 584
           +  L+  M     + ++     L+ + G+SG+ +  ++    ++        N + +M  
Sbjct: 689 ILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIM-- 746

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
                    L +L+ A G  ++  E   VL++M++ G++P +  Y
Sbjct: 747 ---------LKNLL-AVGNWRKYIE---VLEWMEDAGIQPSIGMY 778



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 142/315 (45%), Gaps = 42/315 (13%)

Query: 169 LIHALGR-SEKL-YEAFLLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQDG 223
           L+ A GR  +K+  +A L + + R   L  +  N+ I +     + EKA+ L + MR+  
Sbjct: 466 LLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMK 525

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
              + + Y+++I    + +K   ++  + + ++   KI L  ++ + VI  ++K G  ++
Sbjct: 526 VAPNSVTYTVLISGCCKMSKYGKAI--EFFADMMELKIALTKEVCSSVICAYSKQGQITE 583

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
           A     M +  G  P   T+ A++ A +      +A  + +E+++  ++  T A +AL++
Sbjct: 584 AESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMR 643

Query: 344 GYVKMG----------YLKDAEFVVSE------MERSGVLPD-----------EHTYSL- 375
            + K G          ++K+ E   S+      +    +L D           E ++S+ 
Sbjct: 644 AFNKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSVV 703

Query: 376 -------LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
                  L+     +G+ ES   +  ++  S A+ N   YS +L      G W++  +VL
Sbjct: 704 SIGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRKYIEVL 763

Query: 429 KEMKSSGVEPDTHFY 443
           + M+ +G++P    Y
Sbjct: 764 EWMEDAGIQPSIGMY 778


>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
 gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Cucumis sativus]
          Length = 477

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 14/356 (3%)

Query: 284 AMRFLGM-AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
           A++  G+  Q     P+  TY  ++  L    +  +A  +FE +   GLKP    Y AL+
Sbjct: 110 ALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALV 169

Query: 343 KGYVKMGYLKDAEFVVSEMER-SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
             Y + G L  A   V EM+  S   PD HTYS+LID      R++  + +L +M     
Sbjct: 170 SAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGI 229

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             N+  Y+ I+ G+     +++   +L EM +S    PD   +N  I  +G    +    
Sbjct: 230 TCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKME 289

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             +      GIEPD  T+N++I  + K G YD+ + +   M++R + P   T N +I+  
Sbjct: 290 KWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSF 349

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
           G     E+++    NM+ QG+ PN VTY +LV+ YG+SG  +     L           R
Sbjct: 350 GRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSIL-----------R 398

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            +    + P     N LIN +G+     +   +   MKEN   PD +T+ T+++AL
Sbjct: 399 QIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRAL 454



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 9/324 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTPL--TYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+  LG+ ++  +A LL +    + L P    Y AL+SA  ++  L KA++ + +M+
Sbjct: 130 YTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMK 189

Query: 221 Q-DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
                  D   YS++I   TR  + D  LL+K+  ++ C  I  +    N +I GF KA 
Sbjct: 190 SISDCKPDVHTYSILIDCCTRLRRFD--LLKKILADMSCLGITCNTVTYNTIINGFGKAK 247

Query: 280 DASKAMRFL-GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
              +    L  M +     P   T+   I A  NS +  + E  ++E +  G++P    Y
Sbjct: 248 MFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTY 307

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N+++  Y K G     + V++ ME+    P   T + +ID++  AG  E      K M+ 
Sbjct: 308 NSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKF 367

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
              KPNS  Y  ++  Y   G+ ++   +L+++++S V PDT  +N +I+ +G+   +  
Sbjct: 368 QGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNVRK 427

Query: 459 AMAAFDRMLSEGIEPDTITWNTLI 482
               F  M      PD IT+ T+I
Sbjct: 428 MGELFLEMKENKCVPDGITFATMI 451



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 19/283 (6%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P   TY+ L+       + E A ++ + M     KP+  +Y+ +++ Y   G   +    
Sbjct: 125 PRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAIST 184

Query: 428 LKEMKS-SGVEPDTHFYNVMIDT---FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
           + EMKS S  +PD H Y+++ID      +++ L   +A    M   GI  +T+T+NT+I+
Sbjct: 185 VDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILA---DMSCLGITCNTVTYNTIIN 241

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCT-TTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K   +++ E L  EM E    P    T+N  I   G  E+ E +++     +  G+ 
Sbjct: 242 GFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEFQLMGIE 301

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++ TY +++  YG++G +D           +  +    M      P+ + +N++I++FG
Sbjct: 302 PDIWTYNSMISSYGKAGMYD-----------KMKSVLNFMEKRFFSPTIVTMNTIIDSFG 350

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
                 E     + MK  G+KP+ VTY +L+ A  +     KV
Sbjct: 351 RAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKV 393



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVG-LSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++  + ++G   KA+  +   + +    P   TY+ +I   +   R    + +  ++   
Sbjct: 168 LVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCL 227

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWES 388
           G+   T  YN ++ G+ K    +  E ++ EM E     PD  T++  I AY N+ + E 
Sbjct: 228 GITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEK 287

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                KE ++   +P+ + Y+ +++ Y   G + +   VL  M+     P     N +ID
Sbjct: 288 MEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIID 347

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
           +FG+   +      F  M  +G++P+++T+ +L++ + K G  ++ + +  +++     P
Sbjct: 348 SFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVP 407

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
            T  +N +IN+ G+      +  L   M+    +P+ +T+ T++      G  +DA
Sbjct: 408 DTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITFATMIRALKAQGMTEDA 463



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 32/177 (18%)

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           Q++ Y P   TY  ++ LLG+ ++ E    L   M ++GL P++  YT LV  YGQSG  
Sbjct: 119 QQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLL 178

Query: 562 DDAIEC---LEGLSDQAVNAF----------RVMRTD------------GLKPSNLALNS 596
             AI     ++ +SD   +            R+ R D            G+  + +  N+
Sbjct: 179 HKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRRFDLLKKILADMSCLGITCNTVTYNT 238

Query: 597 LINAFGEDQRDAEAFAVLQYMKE-NGLKPDVVTYTTLMKA------LIRVDKFHKVF 646
           +IN FG+ +   +  ++L  M E +   PD++T+ T ++A      + +++K++K F
Sbjct: 239 IINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAYGNSEQIEKMEKWYKEF 295


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 236/512 (46%), Gaps = 23/512 (4%)

Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNAL 199
           L + VV  + K     +   + +I++  L R+  ++EA  L +   R+ ++P  ++YN L
Sbjct: 127 LGFGVVGLVLKRGFTVNV-FIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTL 185

Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
           I+   +   L++A+ L+ +M   G   + +  + ++  L +  ++D ++  +L + ++  
Sbjct: 186 INGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM--ELLEAMKKK 243

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
             + D  L   +I GF   G+  +         G G+S    TY+ ++  L   G+  EA
Sbjct: 244 GFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEA 303

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             V   + E G+ P    Y  L+ G  K G    A  +++ M   G  P   TY++L+  
Sbjct: 304 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 363

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVE 437
               G    A  +L+ M     K +   Y+ ++ G  D+G+     ++   M    + +E
Sbjct: 364 LCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLE 423

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   +N++I    K   L  A+    +M+ +G   + +T+N L+    K G+   A EL
Sbjct: 424 PNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 483

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
           ++++ + G+ P + TY+I+I+   +       K L   MR  GL P +  Y TL+     
Sbjct: 484 WKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM----- 538

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY- 616
                 A  C EG  +QA + F+ M     +P  ++ N++I+       D +    LQ  
Sbjct: 539 ------ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG-TLKAGDFQFVKELQMK 591

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
           M E GL+PD +T++TL+  L ++ +  +  S+
Sbjct: 592 MVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/570 (22%), Positives = 248/570 (43%), Gaps = 30/570 (5%)

Query: 83  DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
           D    L  L +  NS+   A++   S+L+         +  +P+    + L +  + + +
Sbjct: 39  DLETQLRSLCQKPNSQFTEAVSLFHSALD---------FNLLPSWATCNFLVDALARSRN 89

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYN 197
             LA++V   +   ++  S+  L S LI     ++K    F     +L +   +     N
Sbjct: 90  YGLAFSVYRRMTHVDVLPSFGSL-SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMN 148

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            ++    RN  + +A+ L+ +M +     D ++Y+ +I  L +  K+  ++   L  E+E
Sbjct: 149 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAV--GLLLEME 206

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
                 +      ++ G  K G   +AM  L   +  G       Y  +I+   N+G   
Sbjct: 207 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 266

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
             + +F+E+   G+      Y+ L+ G  ++G  K+A  V++ M   G+ PD  TY+ LI
Sbjct: 267 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 326

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
           D     GR   A  +L  M     +P++  Y+ +L+G    G     F++L+ M   G +
Sbjct: 327 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 386

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE--GIEPDTITWNTLIDCHFKCGRYDRAE 495
            D   YN ++        +  A+  F+ M      +EP+  T+N LI    K GR  +A 
Sbjct: 387 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++  +M ++G      TYN+++    +  + ++   L   +   G +PN  TY+ L+D +
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                      C   + + A   F  MRT GL P+    N+L+ +  ++    +A ++ Q
Sbjct: 507 -----------CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 555

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
            M     +PD++++ T++   ++   F  V
Sbjct: 556 EMGNANCEPDIISFNTMIDGTLKAGDFQFV 585



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 223/519 (42%), Gaps = 30/519 (5%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL-CYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           +++L+  LC +     L  AV   L+     C+   +  + L+  L +  ++ EA  L +
Sbjct: 182 YNTLINGLCKAKK---LKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 238

Query: 188 RQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
             +        + Y  LIS    N +L++   L  +M   G   + + YS ++  L R  
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298

Query: 243 --KIDSSLLQKLYKE-IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
             K  +++L  + +  I  D +   G     +I G  K G A+ AM  L +    G  P 
Sbjct: 299 QWKEANTVLNAMAEHGIHPDVVTYTG-----LIDGLCKDGRATHAMDLLNLMVEKGEEPS 353

Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
             TY  +++ L   G  I+A  +   + E G K     YN L+KG    G + +A  + +
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413

Query: 360 EM--ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
            M    + + P+  T+++LI      GR   A  + ++M    +  N   Y+ +L G   
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G+ +   ++ K++   G  P++  Y+++ID F K   L+ A   F  M + G+ P    
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +NTL+    K G  ++A+ LF+EM      P   ++N MI+   +   ++ VK L   M 
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
             GL P+ +T++TL++   + G  D+A   LE            M   G  P  L  +SL
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALE-----------RMVASGFTPDALVYDSL 642

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           +          E   +L  M   G   D    +T++  L
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCL 681



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 9/410 (2%)

Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS L+H L R  +  EA  +        + P  +TY  LI    ++     A++L++ M 
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G     + Y++++  L +   +  +  + L   IE  K + D    N ++ G    G 
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAF-KILRMMIEKGK-KADVVTYNTLMKGLCDKGK 404

Query: 281 ASKAMRFLG--MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
             +A++           L P   T+  +I  L   GR  +A  +  ++ + G       Y
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
           N LL G +K G +K+A  +  ++   G +P+  TYS+LID +        A+ +  EM  
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 524

Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
               P  F Y+ ++A     G  ++   + +EM ++  EPD   +N MID   K      
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
                 +M+  G+ PD +T++TLI+   K G  D A+   E M   G+ P    Y+ ++ 
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
            L  +    ++  LL  M A+G + +    +T++     S +  D +E L
Sbjct: 645 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 231/503 (45%), Gaps = 30/503 (5%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           +DL++    W++    C   E+L + L H+L  +E L + F      R  P  + +  L+
Sbjct: 28  LDLSF----WVRA--FCNYREILRNGL-HSLQFNEAL-DLFTHMVESRPLPSIIDFTKLL 79

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK--IDSSLLQKLYKEIEC 258
           +  A+    +  +NL   ++  G   D    +L++    ++++  + SS L K+ K    
Sbjct: 80  NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL--- 136

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
              E D      +I GF       +AM  +     +G+ P    Y  +I +L  +G    
Sbjct: 137 -GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195

Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
           A ++F++++  G++P    Y +L+ G    G  +DA+ ++  M +  + PD  T++ LID
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255

Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
           A+   G++  A  +  EM      PN F Y+ ++ G+   G      Q+   M++ G  P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
           D   Y  +I+ F K   +  AM  F  M  +G+  +TIT+ TLI    + G+ + A+E+F
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ---GLLPNVVTYTTLVDIY 555
             M  RG  P   TYN++++ L    + +    +  +M+ +   G+ PN+ TY  L  ++
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL--LH 433

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G          C  G  ++A+  F  MR   +    +    +I    +  +   A  +  
Sbjct: 434 GL---------CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484

Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
            +   G+KP+VVTYTT++  L R
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFR 507



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 201/431 (46%), Gaps = 51/431 (11%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T N L++   ++     A + + KM + G+  D + ++ +I      N+++ ++   +  
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM--SMVN 166

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++    I+ D  +   +I    K G  + A+      +  G+ P    Y +++  L NSG
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  +A+++   + +  +KP    +NAL+  +VK G   DAE + +EM R  + P+  TY+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+ +   G  + AR +   ME     P+   Y+ ++ G+    +     ++  EM   
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +T  Y  +I  FG+    + A   F  M+S G+ P+  T+N L+ C    G+  +A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406

Query: 495 EELFEEMQER---GYFPCTTTYNIMINLL---GEQER----WEDVKR------------- 531
             +FE+MQ+R   G  P   TYN++++ L   G+ E+    +ED+++             
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466

Query: 532 ---------------LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
                          L  ++ ++G+ PNVVTYTT++     SG F       EGL  +A 
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI-----SGLFR------EGLKHEAH 515

Query: 577 NAFRVMRTDGL 587
             FR M+ DG+
Sbjct: 516 VLFRKMKEDGV 526



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 130/287 (45%), Gaps = 11/287 (3%)

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           + +M + G  PD  T++ LI+ +    R E A  ++ +M     KP+  +Y+ I+     
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
            G       +  +M++ G+ PD   Y  +++          A +    M    I+PD IT
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +N LID   K G++  AEEL+ EM      P   TY  +IN    +   ++ +++   M 
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
            +G  P+VV YT+L++ + +  + DDA++            F  M   GL  + +   +L
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMK-----------IFYEMSQKGLTGNTITYTTL 358

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
           I  FG+  +   A  V  +M   G+ P++ TY  L+  L    K  K
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 163/350 (46%), Gaps = 10/350 (2%)

Query: 164 LLYSILIHALGRSEKL-YEAFLLSQRQ----RLTPLTYNALISACARNDDLEKALNLMSK 218
           ++Y+ +I +L ++  + Y   L  Q +    R   + Y +L++    +     A +L+  
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237

Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           M +     D I ++ +I +  +  K   +  ++LY E+    I  +      +I GF   
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDA--EELYNEMIRMSIAPNIFTYTSLINGFCME 295

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
           G   +A +   + +  G  P    Y ++I       +  +A  +F E+ + GL   T  Y
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355

Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM-- 396
             L++G+ ++G    A+ V S M   GV P+  TY++L+      G+ + A ++ ++M  
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415

Query: 397 -EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
            E+    PN + Y+ +L G    G+ ++   V ++M+   ++     Y ++I    K   
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           + +A+  F  + S+G++P+ +T+ T+I   F+ G    A  LF +M+E G
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 172/397 (43%), Gaps = 24/397 (6%)

Query: 84  FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
           FT L+N     +  E A ++ +          ++ E        ++ +++ +LC  N  +
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVN----------QMVEMGIKPDVVMYTTIIDSLCK-NGHV 193

Query: 144 DLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNA 198
           + A ++   ++ + +     ++Y+ L++ L  S +  +A  L +   ++++ P  +T+NA
Sbjct: 194 NYALSLFDQMENYGI-RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           LI A  +      A  L ++M +     +   Y+ +I        +D +  ++++  +E 
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA--RQMFYLMET 310

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
                D      +I GF K      AM+ F  M+Q  GL+  T TY  +I      G+  
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPN 369

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER---SGVLPDEHTYS 374
            A+ VF  +   G+ P  + YN LL      G +K A  +  +M++    GV P+  TY+
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +L+      G+ E A +V ++M           Y+ I+ G    G+ +    +   + S 
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
           GV+P+   Y  MI    +    H A   F +M  +G+
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 14/265 (5%)

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
           ++  A  +   M  S   P+   ++++L       ++     +   ++  GV  D +  N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
           ++++ F + +  + A +   +M+  G EPD +T+ +LI+      R + A  +  +M E 
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
           G  P    Y  +I+ L +         L   M   G+ P+VV YT+LV+    SGR+ DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
              L G++ + +           KP  +  N+LI+AF ++ +  +A  +   M    + P
Sbjct: 232 DSLLRGMTKRKI-----------KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280

Query: 625 DVVTYTTLMKALIR---VDKFHKVF 646
           ++ TYT+L+        VD+  ++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMF 305



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 11/235 (4%)

Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
           Y  IL       ++     +   M  S   P    +  +++   K       +   D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
             G+  D  T N L++C  +  +   A     +M + G+ P   T+  +IN      R E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
           +   ++  M   G+ P+VV YTT++D             C  G  + A++ F  M   G+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSL-----------CKNGHVNYALSLFDQMENYGI 208

Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           +P  +   SL+N      R  +A ++L+ M +  +KPDV+T+  L+ A ++  KF
Sbjct: 209 RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 11/106 (10%)

Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           LP+++ +T L+++  +  +FD  I     L D        ++  G+       N L+N F
Sbjct: 69  LPSIIDFTKLLNVIAKMKKFDVVIN----LCDH-------LQIMGVSHDLYTCNLLMNCF 117

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
            +  +   A + L  M + G +PD+VT+T+L+      ++  +  S
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163


>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
 gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 226/492 (45%), Gaps = 19/492 (3%)

Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISA 202
           LA ++VS ++++ +  S   + +ILI     SE L +   L ++   R+T  TY  L+ A
Sbjct: 162 LARSIVSEMERNGVRGSISTV-NILIGFYENSEDLQKCIGLIKKWGLRMTGYTYKCLVQA 220

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
             R+ + EK   +  +M++ G+  D   +++++ +L + +++D +   K++++++    E
Sbjct: 221 YLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAY--KVFEDMKRKHCE 278

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D      +I    K G   +++         G SP    Y  +I AL+N+    +A  +
Sbjct: 279 PDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILL 338

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           F ++ E   +P    Y+ +L        L   + VV   E S        Y+ L+     
Sbjct: 339 FLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVV---EVSKKYMSRSIYAYLVRTLKK 395

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
            G    A  +   M   H + +      +L      G+      +L ++   GV  DT  
Sbjct: 396 LGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVM 455

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           YN +    GK   +      +++M  +G  PDT T+N LI    + G+ D A ++FEE++
Sbjct: 456 YNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELE 515

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
           +  Y P T +YN +IN LG+    ++       M  +GL P+VVTY+TL++ +G++    
Sbjct: 516 DSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKT---- 571

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
           D +E        A   F  M  +G  P+ +  N L++      R AEA  +   +K+ GL
Sbjct: 572 DKVE-------MACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGL 624

Query: 623 KPDVVTYTTLMK 634
            PD +TY+ L +
Sbjct: 625 IPDSITYSVLAR 636



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 189/397 (47%), Gaps = 11/397 (2%)

Query: 140 NSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-----LLSQRQRLTPL 194
           +S +D AY V   +++ + C   E  Y+I+I   G+  K  E+      +L++      +
Sbjct: 259 DSEVDHAYKVFEDMKRKH-CEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVI 317

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN +I A A    ++KA+ L  KM +         YS+++  L    K     L KL +
Sbjct: 318 AYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERK-----LHKLDE 372

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            +E  K  +   +   ++    K G AS+A R                  +++  L ++G
Sbjct: 373 VVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAG 432

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +T EA  +  ++ E G+   T  YN +     K+  +     +  +M++ G LPD  TY+
Sbjct: 433 KTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYN 492

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI ++  AG+ + A  + +E+E S  KP++  Y+ ++      G         KEM   
Sbjct: 493 ILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEK 552

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ PD   Y+ +I+ FGK + +  A   FD ML+EG  P+ +T+N L+DC  + GR   A
Sbjct: 553 GLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEA 612

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
            +L+ +++++G  P + TY+++  L     R   V++
Sbjct: 613 VDLYAKLKQQGLIPDSITYSVLARLQSGSHRKVRVRK 649



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 198/457 (43%), Gaps = 59/457 (12%)

Query: 224 YHCDFINYSLVIQSLTRTNKIDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           +H D   YS +I  L+++N  D   L + +  E+E + +      +N +++GF +  ++ 
Sbjct: 137 FHHDCFTYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVN-ILIGFYE--NSE 193

Query: 283 KAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALL 342
              + +G+ +  GL     TY  ++ A   S  T +  AV+ E+K+ G      A+N LL
Sbjct: 194 DLQKCIGLIKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLL 253

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL--------------------------- 375
              VK   +  A  V  +M+R    PDE+TY++                           
Sbjct: 254 DALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYS 313

Query: 376 --------LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI---LAGYRDRGEWQRT 424
                   +I A ANA   + A ++  +M     +P+ F YS I   LA  R   +    
Sbjct: 314 PNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEV 373

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            +V K+  S  +      Y  ++ T  K      A   F  M +     D     ++++C
Sbjct: 374 VEVSKKYMSRSI------YAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLEC 427

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
               G+   A +L  ++ E+G    T  YN + + LG+ ++   +  L   M+  G LP+
Sbjct: 428 LCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPD 487

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGED 604
             TY  L+  +G++G+ D+AI+  E L D              KP   + NSLIN  G++
Sbjct: 488 TFTYNILISSFGRAGKVDEAIKIFEELEDS-----------DYKPDTCSYNSLINCLGKN 536

Query: 605 QRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
               EA    + M E GL PDVVTY+TL++   + DK
Sbjct: 537 GHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDK 573



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 24/317 (7%)

Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
           A  +VSEMER+GV     T ++LI  Y N+   +    ++K+  +   +   + Y  ++ 
Sbjct: 163 ARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGL---RMTGYTYKCLVQ 219

Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
            Y      ++ F V  EMK  G   D   +N+++D   K + + HA   F+ M  +  EP
Sbjct: 220 AYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEP 279

Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
           D  T+  +I    K G+ D + ELFEEM  +GY P    YN MI  L      +    L 
Sbjct: 280 DEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLF 339

Query: 534 GNMRAQGLLPNVVTYTTLVDIYG---QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
             M  +   P+  TY+ ++ +     +  + D+ +E  +    +++ A+ V     L  +
Sbjct: 340 LKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEVSKKYMSRSIYAYLVRTLKKLGHA 399

Query: 591 NLA---LNSLINAFGEDQRDA---------------EAFAVLQYMKENGLKPDVVTYTTL 632
           + A     ++ N      RDA               EA  +L  + E G+  D V Y T+
Sbjct: 400 SEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTV 459

Query: 633 MKALIRVDKFHKVFSSY 649
             AL ++ +   +   Y
Sbjct: 460 FSALGKLKQISPLHDLY 476



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 30/197 (15%)

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDR---AEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
           LS     D  T++ +I    K    DR   A  +  EM+  G     +T NI+I   G  
Sbjct: 133 LSPNFHHDCFTYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVNILI---GFY 189

Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR----------------------F 561
           E  ED+++ +G ++  GL     TY  LV  Y +S                        F
Sbjct: 190 ENSEDLQKCIGLIKKWGLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAF 249

Query: 562 DDAIECL--EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           +  ++ L  +   D A   F  M+    +P       +I   G+  +  E+  + + M  
Sbjct: 250 NMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLN 309

Query: 620 NGLKPDVVTYTTLMKAL 636
            G  P+V+ Y T+++AL
Sbjct: 310 KGYSPNVIAYNTMIQAL 326


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 199/435 (45%), Gaps = 27/435 (6%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKEIECDKIELDGQ 266
           +EKA+ +M  + + G   D   Y+ VI    + +++D  S +L ++ K       E D  
Sbjct: 128 IEKAIQVMEILEKHGKP-DVFAYNAVISGFCKADRVDHASKVLDRMKKR----GFEPDVV 182

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N +I  F   G    A+R +         P   TY  +I A    G   EA  + +E+
Sbjct: 183 TYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM 242

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
              GL+P    YN ++ G  K G L  A   +S + ++G +    TY++L+    N G+W
Sbjct: 243 LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           E    ++ +M V   +PN   YS ++      G+      VLK MK   + PD + Y+ +
Sbjct: 303 EYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPL 362

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I    +   +  A+   D M+S G  PD +++N+++    K G  D A  +FE++ E G 
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 507 FPCTTTYNIMINLLGEQERWE--DVKRLLG---NMRAQGLLPNVVTYTTLVDIYGQSGRF 561
            P   +YN +   L     W   D  R LG    M + G+ P+ +TY +L+    + G  
Sbjct: 423 PPNAGSYNTLFGAL-----WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           D AIE L       V+ F    ++  +P+ ++ N+++    + QR  +A  VL  M   G
Sbjct: 478 DQAIELL-------VDMF---ESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEG 527

Query: 622 LKPDVVTYTTLMKAL 636
             P+  TYT L++ +
Sbjct: 528 CLPNETTYTLLIQGI 542



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 25/387 (6%)

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
            K+    +++ FL      G  P       +I    N  +  +A  V E L++ G KP  
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            AYNA++ G+ K   +  A  V+  M++ G  PD  TY++LI  +   GR + A  V+ +
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           +   + KP    Y+ ++     +G      ++L EM S G+ PD + YNV+++   K   
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           L  A     R+   G      T+N L+      G+++  E+L  +M  +G  P   TY+ 
Sbjct: 267 LDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
           +I  L    + ++ K +L  M+ + L P+  +Y  L+    + G+ D AIE         
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
                          C  G +D+A+N F  +   G  P+  + N+L  A         A 
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIR 638
            ++  M  NG+ PD +TY +L+  L R
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCR 473



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 192/430 (44%), Gaps = 10/430 (2%)

Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYN 197
           I+ A  V+  L+KH     +   Y+ +I    +++++  A  +  R +     P  +TYN
Sbjct: 128 IEKAIQVMEILEKHGKPDVFA--YNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYN 185

Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
            LI        L+ AL +M ++ +D      I Y+++I++      ID ++  KL  E+ 
Sbjct: 186 ILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM--KLLDEML 243

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
              +  D    N V+ G  K G   +A  FL      G     +TY  ++  L N G+  
Sbjct: 244 SRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
             E +  ++   G +P    Y+ L+    + G + +A+ V+  M+   + PD ++Y  LI
Sbjct: 304 YGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
            A    G+ + A   L +M      P+   Y+ ILA     G       + +++   G  
Sbjct: 364 SALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCP 423

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           P+   YN +            A+     MLS GI+PD IT+N+LI C  + G  D+A EL
Sbjct: 424 PNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIEL 483

Query: 498 FEEMQE-RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
             +M E     P   +YN ++  L + +R  D   +L  M  +G LPN  TYT L+   G
Sbjct: 484 LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543

Query: 557 QSGRFDDAIE 566
            +G   DA+E
Sbjct: 544 FAGWRYDAME 553



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 12/286 (4%)

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
           + +  M   G  PD    + LI  + N  + E A  V++ +E  H KP+ F Y+ +++G+
Sbjct: 98  YFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILE-KHGKPDVFAYNAVISGF 156

Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
                     +VL  MK  G EPD   YN++I  F     L  A+   D++L +  +P  
Sbjct: 157 CKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTV 216

Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGN 535
           IT+  LI+     G  D A +L +EM  RG  P   TYN+++N + ++   +     L  
Sbjct: 217 ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR 276

Query: 536 MRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALN 595
           +   G +  V TY  L+      G+++   + +   SD        M   G +P+ +  +
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLM---SD--------MLVKGCEPNPITYS 325

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
           +LI A   D +  EA  VL+ MKE  L PD  +Y  L+ AL R  K
Sbjct: 326 TLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 12/225 (5%)

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
            ++  +   L+ M + G +PD      +I  F     +  A+   + +   G +PD   +
Sbjct: 91  AKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAY 149

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
           N +I    K  R D A ++ + M++RG+ P   TYNI+I     + R +   R++  +  
Sbjct: 150 NAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLK 209

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
               P V+TYT L++     G  D+A++ L+            M + GL+P     N ++
Sbjct: 210 DNCKPTVITYTILIEATITQGGIDEAMKLLDE-----------MLSRGLRPDRYTYNVVV 258

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
           N   ++     AF  L  + +NG    V TY  L++ L+   K+ 
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M++ G +PD I    LI   F   + ++A ++ E +++ G  P    YN +I+   + +R
Sbjct: 103 MVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADR 161

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
            +   ++L  M+ +G  P+VVTY  L+  +   GR D A+  ++ L             D
Sbjct: 162 VDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL-----------LKD 210

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
             KP+ +    LI A        EA  +L  M   GL+PD  TY  ++  + +     + 
Sbjct: 211 NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRA 270

Query: 646 F 646
           F
Sbjct: 271 F 271


>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 650

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 251/566 (44%), Gaps = 42/566 (7%)

Query: 84  FTPLLNFLSENSNS----ESASALASSPSSLNRVEFKLAESYRAVPA--------P-LWH 130
           F+ L ++LS  + S    E++  L S  S L  VEF     ++ VP+        P L++
Sbjct: 83  FSDLSDYLSSLTLSLTPDEASEILKSLNSPLVAVEF-----FKFVPSLCPNSQNDPFLYN 137

Query: 131 SLLKNLCSSNSS--IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
            ++  L  SN S   D   +++  + K N+  +   + +ILI   G +E L     L ++
Sbjct: 138 RIILILSRSNLSDRFDRVRSILDSMVKSNVHGNISTV-NILIGFFGDTEDLQMCLRLVKK 196

Query: 189 Q--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
              ++   TY  L+ A  R+ D  KA ++  ++R+ G+  D   Y++++ +L +  K   
Sbjct: 197 WGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKA-C 255

Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
            + + + K   C + E    ++   I    + G   +A+         GL+     Y  +
Sbjct: 256 QVFEDMKKR-HCRRDEYSYTIM---IRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTL 311

Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
           +  L+      +A  VF  + E+G +P    Y+ +L   V  G L   + +V   E S  
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIV---EISKR 368

Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
              +  YS L+   +  G    A  +  +M     K     Y  +L      G+     +
Sbjct: 369 YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           +L ++   GV  DT  YN +    GK   + H    F++M  +G  PD  T+N LI    
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFG 488

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
           + G  D A  +FEE++     P   +YN +IN LG+    ++       M+ +GL P+VV
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY+TL++ +G++ R +            A + F  M   G +P+ +  N L++   +  R
Sbjct: 549 TYSTLMECFGKTERVE-----------MAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGR 597

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTL 632
            AEA  +   MK+ GL PD +TYT L
Sbjct: 598 TAEAVDLYTKMKQQGLTPDSITYTVL 623



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/611 (22%), Positives = 263/611 (43%), Gaps = 54/611 (8%)

Query: 6   PQPLSVRFPAIHSACPITRHHVIFQPAFSVSTITGITTATASGESSFSSSSFTSKQNDTE 65
           P PL    PA     P+ R H+I +    +   T ++ A +      SS + +   ++  
Sbjct: 48  PNPL----PADVRGYPLPRRHLICRATNLIIGATNLSDAFSDLSDYLSSLTLSLTPDEAS 103

Query: 66  EEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVP 125
           E  +  +  L +  + + F P L   S+N            P   NR+   L+ S  +  
Sbjct: 104 EILKSLNSPL-VAVEFFKFVPSLCPNSQND-----------PFLYNRIILILSRSNLSDR 151

Query: 126 APLWHSLLKNLCSSN-----SSIDLAYAVVSWLQKHNLCYSY---------ELLYSILIH 171
                S+L ++  SN     S++++        +   +C               Y  L+ 
Sbjct: 152 FDRVRSILDSMVKSNVHGNISTVNILIGFFGDTEDLQMCLRLVKKWGLKMNSFTYKCLLQ 211

Query: 172 ALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
           A  RS    +AF     +     +L    YN L+ A A++   EKA  +   M++     
Sbjct: 212 AYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRR 268

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
           D  +Y+++I+++ R  K D ++   L+ E+  + + L+    N ++   AK     KA++
Sbjct: 269 DEYSYTIMIRTMGRIGKYDEAV--GLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326

Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
                   G  P   TY+ V+  L   G+ +  + + E  K    +     Y+ L++   
Sbjct: 327 VFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQ---GIYSYLVRTLS 383

Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
           K+G++ +A  +  +M    V  +  +Y  ++++   AG+   A  +L ++       ++ 
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443

Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
           +Y+ + +      +      + ++MK  G  PD   YN++I +FG+   +  A+  F+ +
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEEL 503

Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
                +PD I++N+LI+C  K G  D A   F+EMQE+G  P   TY+ ++   G+ ER 
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563

Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
           E    L   M  +G  PN+VTY  L+D   +SGR           + +AV+ +  M+  G
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGR-----------TAEAVDLYTKMKQQG 612

Query: 587 LKPSNLALNSL 597
           L P ++    L
Sbjct: 613 LTPDSITYTVL 623



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/463 (22%), Positives = 207/463 (44%), Gaps = 31/463 (6%)

Query: 193 PLTYNALISACARN---DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           P  YN +I   +R+   D  ++  +++  M +   H +    +++I         D+  L
Sbjct: 133 PFLYNRIILILSRSNLSDRFDRVRSILDSMVKSNVHGNISTVNILIGFFG-----DTEDL 187

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
           Q   + ++   ++++      ++  + ++ D+SKA       +  G       Y  ++ A
Sbjct: 188 QMCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+   +  +   VFE++K+   +    +Y  +++   ++G   +A  + +EM   G+  +
Sbjct: 248 LAKDEKACQ---VFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLN 304

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR---TFQ 426
              Y+ L+   A     + A  V   M  +  +PN + YS +L      G+  R     +
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVE 364

Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
           + K   + G+      Y+ ++ T  K   +  A   F  M S  ++ +  ++ ++++   
Sbjct: 365 ISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418

Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
             G+   A E+  ++ E+G    T  YN + + LG+ ++   +  L   M+  G  P++ 
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478

Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
           TY  L+  +G+ G  D+AI   E L           R+D  KP  ++ NSLIN  G++  
Sbjct: 479 TYNILISSFGRVGEVDEAINIFEELE----------RSD-CKPDIISYNSLINCLGKNGD 527

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             EA    + M+E GL PDVVTY+TLM+   + ++    +S +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 2/355 (0%)

Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
           R  ++E++  L  ++   GY      +++++    +   + ++ L  ++ EI    +   
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARL--VFDEIPKRGLRPT 282

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
               N +I G  K+GD  +  R  G+ +  G+ P   T++A+I  L   GR  E   +F+
Sbjct: 283 VVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFD 342

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
           E+   GL P    +  L+ G  K G +  A      M   GV PD  TY+ LI+     G
Sbjct: 343 EMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 402

Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
             + AR ++ EM  S  KP+   ++ ++ G    G+ +   ++ + M   G+E D   + 
Sbjct: 403 DLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFT 462

Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
            +I    +   +H A      MLS G +PD  T+  +IDC  K G      +L +EMQ  
Sbjct: 463 ALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSD 522

Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           G+ P   TYN ++N L +Q + ++ K LL  M   G+ PN +TY  L+D + + G
Sbjct: 523 GHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 11/339 (3%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  PK   +  ++     +G    A  VF+E+ + GL+P   ++N L+ G  K G +++ 
Sbjct: 243 GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG 302

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +   ME  GV PD  T+S LI+     GR +   ++  EM      PN   ++ ++ G
Sbjct: 303 FRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDG 362

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G+     +  + M + GV PD   YN +I+   K   L  A    + M + G++PD
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT+ TLID   K G  + A E+   M E G       +  +I+ L  + R  D  R+L 
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
           +M + G  P+  TYT ++D +           C +G         + M++DG  P  +  
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCF-----------CKKGDVKMGFKLLKEMQSDGHVPGVVTY 531

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           N+L+N   +  +   A  +L  M   G+ P+ +TY  L+
Sbjct: 532 NALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 215/498 (43%), Gaps = 23/498 (4%)

Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACAR 205
           A+++VS+L       S   L+S ++  + R    + +           L ++ALISA   
Sbjct: 138 AHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHS---------VGLVFDALISAYVD 188

Query: 206 NDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG 265
           +     A+     + ++ +         +++ + R   ++      LY E+         
Sbjct: 189 SGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKI 248

Query: 266 QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              N ++ GF KAGD   A          GL P   ++  +I+    SG   E   +   
Sbjct: 249 YFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGV 308

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           ++  G+ P    ++AL+ G  K G L +   +  EM   G++P+  T++ LID     G+
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A    + M     +P+   Y+ ++ G    G+ +   +++ EM +SG++PD   +  
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           +ID   K   +  A+    RM+ EGIE D + +  LI    + GR   A  +  +M   G
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
           + P   TY ++I+   ++   +   +LL  M++ G +P VVTY  L++   + G+  +A 
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA- 547

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
              + L D  +N        G+ P+++  N L++      +   +  V  +  E GL  D
Sbjct: 548 ---KMLLDAMLNV-------GVAPNDITYNILLDGH---SKHGSSVDVDIFNSEKGLVTD 594

Query: 626 VVTYTTLMKALIRVDKFH 643
             +YT L+    +  K H
Sbjct: 595 YASYTALVNESSKTSKDH 612


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 226/522 (43%), Gaps = 49/522 (9%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMR 220
           + +++   GR   ++ A    +R R   +TP +  Y +LI A A   D+++AL+ + KM+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371

Query: 221 QDGYHCDFINYSLVIQSLTRTN-------------KIDSSLLQKLY-------------- 253
           ++G     + YS+++   ++               +I  +L   +Y              
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431

Query: 254 ------KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
                 +E+E + I+    + + ++ G+    D  K +      +  G +P   TY  +I
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491

Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
              +  G+  +A  V   +KE G+K   K Y+ ++ G+VK+    +A  V  +M + G+ 
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           PD   Y+ +I A+   G  + A   +KEM+    +P +  +  I+ GY   G+ +R+ +V
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
              M+  G  P  H +N +I+   +   +  A+   D M   G+  +  T+  ++  +  
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G   +A E F  +Q  G      TY  ++    +  R +    +   M A+ +  N   
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731

Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
           Y  L+D + + G   D  E        A +  + M+ +G+KP      S I+A  +    
Sbjct: 732 YNILIDGWARRG---DVWE--------AADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780

Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             A   ++ M+  G+KP++ TYTTL+K   R     K  S Y
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 203/452 (44%), Gaps = 21/452 (4%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYK 254
           Y+ ++       D +K L +  ++++ G+    + Y  +I   T+  KI  +L + ++ K
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E   + ++ + +  + +I GF K  D + A          G+ P    Y  +I+A    G
Sbjct: 512 E---EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A    +E+++   +P T+ +  ++ GY K G ++ +  V   M R G +P  HT++
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI+      + E A  +L EM ++    N   Y++I+ GY   G+  + F+    +++ 
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G++ D   Y  ++    K   +  A+A    M +  I  ++  +N LID   + G    A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            +L ++M++ G  P   TY   I+   +        + +  M A G+ PN+ TYTTL+  
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF--- 611
           + ++            L ++A++ +  M+  G+KP     + L+ +       AEA+   
Sbjct: 809 WARA-----------SLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 857

Query: 612 ---AVLQYMKENGLKPDVVTYTTLMKALIRVD 640
               + + M E GL  D+ T     K L +++
Sbjct: 858 GVMTICKEMVEAGLIVDMGTAVHWSKCLCKIE 889



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 162/376 (43%), Gaps = 24/376 (6%)

Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
           P    +  ++      G    A   FE ++  G+ P ++ Y +L+  Y     + +A   
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366

Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
           V +M+  G+     TYS+++  ++ AG  E+A     E +  H   N+ IY +I+  +  
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426

Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
               +R   +++EM+  G++     Y+ M+D +         +  F R+   G  P  +T
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +  LI+ + K G+  +A E+   M+E G      TY++MIN   + + W +   +  +M 
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------GLSD 573
            +G+ P+V+ Y  ++  +   G  D AI+ ++                        G   
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606

Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
           +++  F +MR  G  P+    N LIN   E ++  +A  +L  M   G+  +  TYT +M
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666

Query: 634 KALIRVDKFHKVFSSY 649
           +    V    K F  +
Sbjct: 667 QGYASVGDTGKAFEYF 682



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 58/294 (19%)

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           N   W++     +++    +KP+   +  ++  Y  RG+  R  +  + M++ G+ P + 
Sbjct: 290 NGDNWQAVISAFEKI----SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR----------- 490
            Y  +I  +     +  A++   +M  EGIE   +T++ ++    K G            
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405

Query: 491 ------------------------YDRAEELFEEMQERGYFPCTTTYNIMIN----LLGE 522
                                    +RAE L  EM+E G       Y+ M++    +  E
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADE 465

Query: 523 QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
           ++     KRL    +  G  P VVTY  L+++Y + G+   A+E             RVM
Sbjct: 466 KKGLVVFKRL----KECGFTPTVVTYGCLINLYTKVGKISKALE-----------VSRVM 510

Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
           + +G+K +    + +IN F + +  A AFAV + M + G+KPDV+ Y  ++ A 
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 227/474 (47%), Gaps = 29/474 (6%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
           T+N L++       LE AL ++ +M  +   + D + Y+ +++++++  ++  S L++L 
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRL--SDLKELL 263

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            +++ + +  +    N+++ G+ K G   +A + + + +   + P   TY  +I  L N+
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G   E   + + +K   L+P    YN L+ G  ++G   +A  ++ +ME  GV  ++ T+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           ++ +       + E+    +KE+   H   P+   Y  ++  Y   G+     ++++EM 
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
             G++ +T   N ++D   K   L  A    +     G   D +T+ TLI   F+  + +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503

Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
           +A E+++EM++    P  +T+N +I  L    + E        +   GLLP+  T+ +++
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563

Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
             Y + GR + A E                        C EG++++A+N F  +  +  +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEERE 622

Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
              +  N++I+AF +D++  EA+ +L  M+E GL+PD  TY + +  L+   K 
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 186/391 (47%), Gaps = 22/391 (5%)

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL---SNSGRTIEAEAVF 323
           L +  +  +   G    A++       + L P   T   ++  L    +S     A  VF
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDA----EFVVSEMERSGVLPDEHTYSLLIDA 379
           +++ + G+    + +N L+ GY   G L+DA    E +VSE +   V PD  TY+ ++ A
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK---VNPDNVTYNTILKA 249

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
            +  GR    + +L +M+ +   PN   Y+ ++ GY   G  +  FQ+++ MK + V PD
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN++I+       +   +   D M S  ++PD +T+NTLID  F+ G    A +L E
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQS 558
           +M+  G      T+NI +  L ++E+ E V R +  +    G  P++VTY TL+  Y + 
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
           G    A+E +           R M   G+K + + LN++++A  ++++  EA  +L    
Sbjct: 430 GDLSGALEMM-----------REMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           + G   D VTY TL+    R +K  K    +
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 246/550 (44%), Gaps = 44/550 (8%)

Query: 139 SNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNA 198
           S+S + L   V S L  H    +  LL S  I     S  L  + LL     L+P    A
Sbjct: 75  SDSPLPLISVVRSLLSHHKFADAKSLLVSY-IRTSDASLSLCNS-LLHPNLHLSPPPSKA 132

Query: 199 L----ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR-TNKIDSSLLQKLY 253
           L    +SA         AL +  KM +     + +  + ++  L R  +    S  ++++
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSN 312
            ++    + L+ Q  N ++ G+   G    A+  L  M     ++P   TY  ++ A+S 
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
            GR  + + +  ++K++GL P    YN L+ GY K+G LK+A  +V  M+++ VLPD  T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y++LI+   NAG       ++  M+    +P+   Y+ ++ G  + G      +++++M+
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-----GIEPDTITWNTLIDCHFK 487
           + GV+ +   +N+ +    K+ C      A  R + E     G  PD +T++TLI  + K
Sbjct: 373 NDGVKANQVTHNISL----KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
            G    A E+  EM ++G    T T N +++ L ++ + ++   LL +   +G + + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 548 YTTLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMR 583
           Y TL+  + +  + + A+E                        C  G ++ A+  F  + 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
             GL P +   NS+I  + ++ R  +AF       ++  KPD  T   L+  L +     
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 644 KVFSSYLFFN 653
           K  +   FFN
Sbjct: 609 KALN---FFN 615



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/459 (22%), Positives = 202/459 (44%), Gaps = 26/459 (5%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ ++ A+   GR   L E  L  ++  L P  +TYN L+    +   L++A  ++  M+
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q     D   Y+++I  L     +   L  +L   ++  K++ D    N +I G  + G 
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGL--ELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE----SGLKPRTK 336
           + +A + +   +  G+     T+   +  L    +    EAV  ++KE     G  P   
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK---REAVTRKVKELVDMHGFSPDIV 417

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            Y+ L+K Y+K+G L  A  ++ EM + G+  +  T + ++DA     + + A  +L   
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477

Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
                  +   Y  ++ G+    + ++  ++  EMK   + P    +N +I     +   
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537

Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
             AM  FD +   G+ PD  T+N++I  + K GR ++A E + E  +  + P   T NI+
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597

Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
           +N L ++   E        +  +  + + VTY T++  + +  +  +A + L  + ++  
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEK-- 654

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
                    GL+P     NS I+   ED + +E   +L+
Sbjct: 655 ---------GLEPDRFTYNSFISLLMEDGKLSETDELLK 684



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 168/408 (41%), Gaps = 61/408 (14%)

Query: 142 SIDLAYAVVSWLQKHN----LCYSYELLYSILIHALGRSEKLYEAFLLS---QRQRLTP- 193
           S+  A+ +V  +++ N    LC      Y+ILI+ L  +  + E   L    +  +L P 
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCT-----YNILINGLCNAGSMREGLELMDAMKSLKLQPD 344

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDG----------------------------- 223
            +TYN LI  C       +A  LM +M  DG                             
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404

Query: 224 -------YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
                  +  D + Y  +I++  +   +  +L  ++ +E+    I+++   LN ++    
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL--EMMREMGQKGIKMNTITLNTILDALC 462

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           K     +A   L  A   G      TY  +I       +  +A  +++E+K+  + P   
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522

Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
            +N+L+ G    G  + A     E+  SG+LPD+ T++ +I  Y   GR E A     E 
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE- 581

Query: 397 EVSHA-KPNSFIYSRILAGYRDRGEWQRT---FQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
            + H+ KP+++  + +L G    G  ++    F  L E +    E DT  YN MI  F K
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER----EVDTVTYNTMISAFCK 637

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEE 500
              L  A      M  +G+EPD  T+N+ I    + G+    +EL ++
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 215/506 (42%), Gaps = 57/506 (11%)

Query: 147 YAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYNALIS 201
           + ++  + ++ +C    +  S +I  LG ++ + +A  +     +++ + T   YN++I 
Sbjct: 139 WKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMII 198

Query: 202 ACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
                 + EK   L ++M  +G  C  D + YS +I +  +  + DS++           
Sbjct: 199 MLMHEGEYEKVHELYNEMSNEG-QCFPDTVTYSALISAFCKLGRQDSAIW---------- 247

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
                  LLN++                    +  G+ P    Y  ++  L        A
Sbjct: 248 -------LLNEM--------------------KDNGMQPTAKIYTMLMALLFKLDNVHGA 280

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +FEE++    +P    Y  L++G  K G L +A     EM R G  PD    + +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINF 340

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRGEWQRTFQVLKEMKSSGVEP 438
              AGR + A  + +EME     P+   Y+ I+ A +  +          + MK SG+ P
Sbjct: 341 LGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISP 400

Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
               Y+++ID F K N    AM   + M  +G  P    + +LID   K  RYD A ELF
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELF 460

Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQS 558
           +E++E         Y +MI  LG+  R +D   L   M   G  PNV  Y  L+    ++
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARA 520

Query: 559 GRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
                      G+ D+A+   R M+  G  P   + N ++NA  +      A  +L  MK
Sbjct: 521 -----------GMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMK 569

Query: 619 ENGLKPDVVTYTTLMKALIRVDKFHK 644
           ++ +KPD V+Y T++ AL     F +
Sbjct: 570 QSAIKPDAVSYNTVLGALSHAGMFEE 595



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 187/407 (45%), Gaps = 12/407 (2%)

Query: 159 CYSYELLYSILIHA---LGRSEKLYEAFLLSQRQ----RLTPLTYNALISACARNDDLEK 211
           C+   + YS LI A   LGR +     +LL++ +    + T   Y  L++   + D++  
Sbjct: 222 CFPDTVTYSALISAFCKLGRQDS--AIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHG 279

Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
           AL L  +MR      D   Y+ +I+ L +  ++D +     + E+  +    D  L+N++
Sbjct: 280 ALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAY--NFFHEMRREGCRPDTVLMNNM 337

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESG 330
           I    KAG    A++     + +   P   TY  +I AL  S  R  E  + FE +K SG
Sbjct: 338 INFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSG 397

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           + P    Y+ L+ G+ K    + A  ++ EM+  G  P    Y  LIDA   A R++ A 
Sbjct: 398 ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLAN 457

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            + +E++ +    ++ +Y+ ++      G       +  EM   G  P+ + YN ++   
Sbjct: 458 ELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGL 517

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +   L  A+    RM   G  PD  ++N +++   K G  DRA  +   M++    P  
Sbjct: 518 ARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDA 577

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +YN ++  L     +E+  +L+  M A G   +++TY+++++  G+
Sbjct: 578 VSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 197/423 (46%), Gaps = 19/423 (4%)

Query: 160 YSYELLYSILIHALGRSEKLYEAF-LLSQRQRLTP--LTYNALISACARNDDLEKALNLM 216
           ++Y  +  +L+H  G  EK++E +  +S   +  P  +TY+ALISA  +    + A+ L+
Sbjct: 191 HAYNSMIIMLMHE-GEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLL 249

Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
           ++M+ +G       Y++++  L + + +  +L   L++E+       D     ++I G  
Sbjct: 250 NEMKDNGMQPTAKIYTMLMALLFKLDNVHGAL--GLFEEMRHQYCRPDVFTYTELIRGLG 307

Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
           KAG   +A  F    +  G  P T     +I  L  +GR  +A  +FEE++     P   
Sbjct: 308 KAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVV 367

Query: 337 AYNALLKGYVKMGYLKDAEFVVSE-------MERSGVLPDEHTYSLLIDAYANAGRWESA 389
            YN ++K       L +++  VSE       M+ SG+ P   TYS+LID +    R E A
Sbjct: 368 TYNTIIKA------LFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKA 421

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++L+EM+     P    Y  ++        +    ++ +E+K +        Y VMI  
Sbjct: 422 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKH 481

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
            GK   L  A+  FD M   G  P+   +N L+    + G  D A      MQ+ G  P 
Sbjct: 482 LGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPD 541

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
             +YNI++N L +    +    +L NM+   + P+ V+Y T++     +G F++A + ++
Sbjct: 542 INSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMK 601

Query: 570 GLS 572
            ++
Sbjct: 602 EMN 604


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 171/359 (47%), Gaps = 36/359 (10%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
           +A  +F+E+      P    YN L++G+ K G +  A  V S+M+ SG+LP+  T + L+
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
                 G+  SA  + +EM+     P S  ++ +L G+   G   R  +  KEMK+SGVE
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVE 124

Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
           PD   Y++++        +  A A F  M      PD +T+N L+D + K G+   A+ L
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
            +E+ + GY P   TY+I+IN   + ++ E+   +   M     +PN VT+ TL+  + +
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241

Query: 558 SGRFDDAIECL-------------------------EGLSDQAVNAFRVMRTDGLKPSNL 592
           +G  +DAI+                            G    AV+ F  +   GL P+ +
Sbjct: 242 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 301

Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
             NSLI  F E  R  +   +L +M   G KPDV+TY  L+  L    RV+   ++F+ 
Sbjct: 302 TYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 210/441 (47%), Gaps = 37/441 (8%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    +   + +A+++ S M+  G   +    + ++  L    ++ S+L  KL++
Sbjct: 27  TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL--KLFR 84

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E++           N ++ GF  AG   +A+ F    +  G+ P   +Y  +++ALS+SG
Sbjct: 85  EMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSG 141

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R  EA A+F  +  S   P    YN L+ GY K+G   +A+ ++ E+ ++G  P+  TYS
Sbjct: 142 RMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 198

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           ++I+ Y    + E A  V  +M  S+  PN+  ++ ++AG+   G  +   ++  EM+  
Sbjct: 199 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 258

Query: 435 GVEPDTHFYNVMIDTF-GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
           G +     YN +ID+   K   ++ A+  F+++   G+ P  +T+N+LI      G  +R
Sbjct: 259 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ-----GFSER 313

Query: 494 AEE---LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           A +   L   M   G  P   TYN +I+ L    R ED +RL   M      PNV T+  
Sbjct: 314 ANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA---PNVTTFNF 370

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
           L+       + ++A   L+ ++                P     N++I AF +     +A
Sbjct: 371 LIRGLCAQKKVEEARNILDRMT---------------APDMTTFNTIILAFCKAGAMHDA 415

Query: 611 FAVLQYMKENGLKPDVVTYTT 631
             V++ M ++G  P+  TYTT
Sbjct: 416 REVMKDMLKHGFYPN--TYTT 434



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 185/427 (43%), Gaps = 58/427 (13%)

Query: 251 KLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
           +L+KE+       +    N +I GF K G   +A+      +  GL P  +T   ++  L
Sbjct: 11  RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL 70

Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
              G+   A  +F E++     P + ++N LL+G+   G  +  EF   EM+ SGV PD 
Sbjct: 71  CEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG--RAIEF-FKEMKASGVEPDL 127

Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
            +Y +L+ A +++GR   A  +   M  S   P+   Y+ ++ GY   G+      ++KE
Sbjct: 128 ESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKE 184

Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
           +  +G EP+   Y+++I+ + K + +  A   F +M+     P+ +T+NTLI    K G 
Sbjct: 185 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 244

Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLL------------------------------ 520
            + A +LF EM++ G      TYN +I+ L                              
Sbjct: 245 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 304

Query: 521 ----GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
               G  ER  D  RLL +M A+G  P+V+TY  L+     + R +DA     G++    
Sbjct: 305 SLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---- 360

Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
                       P+    N LI      ++  EA  +L  M      PD+ T+ T++ A 
Sbjct: 361 ----------CAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTIILAF 406

Query: 637 IRVDKFH 643
            +    H
Sbjct: 407 CKAGAMH 413



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 14/315 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDG 223
           Y IL+ AL  S ++ EA  L      +P  +TYN L+    +     +A +LM ++ + G
Sbjct: 130 YHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 189

Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
           Y  +   YS++I    + +K++ +  +   K IE + +  +    N +I GF KAG    
Sbjct: 190 YEPNVFTYSIIINCYCKLDKVEEA-WEVFMKMIESNCVP-NAVTFNTLIAGFCKAGMLED 247

Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNS-GRTIEAEAVFEELKESGLKPRTKAYNALL 342
           A++     + +G      TY  +I +L    G    A  +F +L+ +GL P    YN+L+
Sbjct: 248 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 307

Query: 343 KGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK 402
           +G+ +     D   ++  M   G  PD  TY+ LI    +A R E A+ +   M  +   
Sbjct: 308 QGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA--- 362

Query: 403 PNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA 462
           PN   ++ ++ G   + + +    +L  M +    PD   +N +I  F K   +H A   
Sbjct: 363 PNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREV 418

Query: 463 FDRMLSEGIEPDTIT 477
              ML  G  P+T T
Sbjct: 419 MKDMLKHGFYPNTYT 433



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 109/228 (47%), Gaps = 17/228 (7%)

Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
           +  ++ KE+ +    P+ H YNV+I  F K   +H A++ F  M S G+ P+  T NTL+
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
               + G+   A +LF EMQ   + P + ++NI++       R  +       M+A G+ 
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVE 124

Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
           P++ +Y  L+     SGR  +A      ++                P  +  N L++ + 
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMT--------------CSPDIMTYNVLMDGYC 170

Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
           +  +  EA ++++ + + G +P+V TY+ ++    ++DK  + +  ++
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 218


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 197/441 (44%), Gaps = 16/441 (3%)

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           L KA N+   M Q G     + Y+ ++ S  +  ++D +L  +L  E++      +    
Sbjct: 196 LSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL--ELLSEMQERGCYPNDVTY 253

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++ G +K G+  +A   +      GL+    TY  +I      G  +EA  + EE+  
Sbjct: 254 NVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVN 313

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
               P    YN L+ G  K   +       S+M +S   PD  +++ L+  Y   G    
Sbjct: 314 RRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISE 373

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A ++  E++     P    Y+ ++ G    G      ++ KEM   G+ PD   Y ++++
Sbjct: 374 AFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   +  A   F+ MLS+G++PD   +NT I    K      A  + EEM   G+ P
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP 493

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              TYN+ ++ L +Q  +E+   LL NM + GL+P+ VTYT++++ + ++G    A E  
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE-- 551

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                     F  M + G+ PS +    LI+A    Q    AF     M E  +  +V+T
Sbjct: 552 ---------VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602

Query: 629 YTTLMKALI---RVDKFHKVF 646
           Y  ++  L    R+D+ +K F
Sbjct: 603 YNAIINGLCMTRRMDEAYKYF 623



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/490 (23%), Positives = 214/490 (43%), Gaps = 50/490 (10%)

Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
           T +TYN ++ +  +   +++AL L+S+M++ G + + + Y++++  L++  +++ +  + 
Sbjct: 214 TVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA--KG 271

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKA--------------------------- 284
           L +E+    + +     N +I GF + G   +A                           
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 285 ---------MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
                    +RF  M +    +P   ++ +++     +G   EA  +F+ELK   L P  
Sbjct: 332 KWVQVTGVRLRFSDMLKS-KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTV 390

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
             YN L+ G    GYL  A  +  EM   G+ PD  TY++L++     G    AR    E
Sbjct: 391 ITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNE 450

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M     KP+ F Y+  + G     +    F + +EM ++G  PD   YNV +    +   
Sbjct: 451 MLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGN 510

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
              A    + M+S+G+ PD +T+ ++I+   K G   +A E+F EM  +G  P   TY +
Sbjct: 511 FEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTV 570

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
           +I+    ++  +        M  + +  NV+TY  +++    + R D+A +         
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK--------- 621

Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
              F  M   G+ P+  +   LIN         EA  + + M +  ++PD  T++  +K 
Sbjct: 622 --YFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKN 679

Query: 636 LIRVDKFHKV 645
           L R  + H V
Sbjct: 680 LHRDYQVHAV 689



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/498 (23%), Positives = 213/498 (42%), Gaps = 46/498 (9%)

Query: 115 FKLAESYRAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL 173
           + + E +   P  + ++++L + C     +D A  ++S +Q+   CY  ++ Y++L++ L
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKE-GRVDQALELLSEMQERG-CYPNDVTYNVLVNGL 260

Query: 174 GRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLM------------ 216
            +  +L +A      +L+    ++  TYN LI+   +     +A +L+            
Sbjct: 261 SKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320

Query: 217 -----------------------SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
                                  S M +  +  D ++++ ++    RT  I  + L  L+
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFL--LF 378

Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
            E++C  +       N +I G    G    A+R        GL P   TY  ++      
Sbjct: 379 DELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKL 438

Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
           G    A   F E+   GLKP   AYN  + G +K+     A  +  EM  +G  PD  TY
Sbjct: 439 GYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITY 498

Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
           ++ + A    G +E A  +L+ M      P+   Y+ I+ G+   G  ++  +V  EM S
Sbjct: 499 NVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558

Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
            GV P    Y V+I        L  A   F +ML + +  + IT+N +I+      R D 
Sbjct: 559 KGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDE 618

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
           A + F+EM+E+G  P   +Y I+IN       WE+  RL   M  + + P+  T++  + 
Sbjct: 619 AYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678

Query: 554 IYGQSGRFDDAIECLEGL 571
              +  +   A++C+E L
Sbjct: 679 NLHRDYQV-HAVQCVESL 695



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 174/373 (46%), Gaps = 12/373 (3%)

Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
           +V    AG     + F  M +  GL P       ++  L +     +A+ V+  +++ G+
Sbjct: 153 VVDVLIAGHVXCLLVFDKMIRN-GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGI 211

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           KP    YN +L  Y K G +  A  ++SEM+  G  P++ TY++L++  +  G  E A+ 
Sbjct: 212 KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKG 271

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +++EM  S    +++ Y+ ++ G+  +G +   F +++EM +    P    YN ++    
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
           K+  +      F  ML     PD +++N+L+  + + G    A  LF+E++ R   P   
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391

Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
           TYN +I+ L      +   RL   M  QGL P++ TYT LV+     G F        G 
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN-----GCFK------LGY 440

Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
              A   F  M + GLKP   A N+ I    +    + AF++ + M   G  PDV+TY  
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNV 500

Query: 632 LMKALIRVDKFHK 644
            + AL +   F +
Sbjct: 501 FVHALCQQGNFEE 513


>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 193/391 (49%), Gaps = 11/391 (2%)

Query: 131 SLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ- 189
           ++L +  + +  +D AY V   +++ + C      Y+I+I   G++ K  E+  L Q   
Sbjct: 227 NMLLDALAKDQKVDKAYKVFEDMKRRH-CEPDTFTYTIMIRMTGKAGKTDESLALFQAML 285

Query: 190 ----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
                L  + YN +I A A+    +KA+ L SKM ++G   +   YS+++  L    +  
Sbjct: 286 EKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQ-- 343

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
              L KL   +E  K  ++ Q+    +   +K G +S+A R       V        Y +
Sbjct: 344 ---LNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMS 400

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++ +L +SG+  EA  +     E  +   T  YN +     ++  +     +  +M++ G
Sbjct: 401 MLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDG 460

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
             PD  TY++LI +Y  AGR +SA  + +E+E S+ +P+   Y+ ++      G+     
Sbjct: 461 PPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAH 520

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
              KEM+  G+ PD   Y+ +I+ FGK + +  A + FD M++EG  P+ +T+N L+DC 
Sbjct: 521 MRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCL 580

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
            + GR   A +L+ +++++G  P + TY ++
Sbjct: 581 ERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 196/443 (44%), Gaps = 16/443 (3%)

Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
           R    +Y  L+    R  D +KA  +   M + GY  D   +++++ +L +  K+D +  
Sbjct: 185 RFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAY- 243

Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
            K++++++    E D      +I    KAG   +++         G +     Y  +I A
Sbjct: 244 -KVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEA 302

Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
           L+      +A  +F ++ E+G +P    Y+ LL   V  G L   + +V   E S    +
Sbjct: 303 LAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV---EMSKKYMN 359

Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
           +  Y+  +   +  G    A  +   M   H K +   Y  +L      G+      +L 
Sbjct: 360 KQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLN 419

Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
                 +  DT  YN +    G+   + H    +++M  +G  PD  T+N LI  + + G
Sbjct: 420 RFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAG 479

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           R D A ++FEE++     P   +YN +IN LG+    ++       M+ +GL P+VVTY+
Sbjct: 480 RVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYS 539

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           TL++ +G++    D +E        A + F  M  +G  P+ +  N L++      R AE
Sbjct: 540 TLIECFGKT----DKVE-------MACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAE 588

Query: 610 AFAVLQYMKENGLKPDVVTYTTL 632
           A  +   +K+ GL PD +TY  L
Sbjct: 589 AVDLYAKLKQQGLTPDSITYAVL 611



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 195/430 (45%), Gaps = 9/430 (2%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL--LSQRQRLTPLTYNALISACARN 206
           V  W  + N  YSY+ L    +  L   +K +  +L  L     L    +N L+ A A++
Sbjct: 179 VKKWGLRFN-AYSYKCLLQGYLR-LRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKD 236

Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
             ++KA  +   M++     D   Y+++I+   +  K D SL   L++ +      L+  
Sbjct: 237 QKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESL--ALFQAMLEKGFTLNLI 294

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
             N +I   AK   A KA+         G  P   TY+ ++  L   G+  + + + E  
Sbjct: 295 AYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMS 354

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           K+   K   + Y   ++   K+G+  +A  +   M       D+  Y  ++++  ++G+ 
Sbjct: 355 KKYMNK---QIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKI 411

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +L          ++ +Y+ +        +      + ++MK  G  PD   YN++
Sbjct: 412 AEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNIL 471

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I ++G+   +  A+  F+ + +   +PD I++N+LI+C  K G  D A   F+EMQE+G 
Sbjct: 472 ISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGL 531

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TY+ +I   G+ ++ E    L   M A+G  PN+VTY  L+D   +SGR  +A++
Sbjct: 532 NPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVD 591

Query: 567 CLEGLSDQAV 576
               L  Q +
Sbjct: 592 LYAKLKQQGL 601



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 164/372 (44%), Gaps = 16/372 (4%)

Query: 271 VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
           ++ G+ +  D  KA   +L M +  G S     +  ++ AL+   +  +A  VFE++K  
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLR-CGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRR 252

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
             +P T  Y  +++   K G   ++  +   M   G   +   Y+ +I+A A     + A
Sbjct: 253 HCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKA 312

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
            ++  +M  +  +PN F YS +L      G+  +   ++ EM    +  +   Y   + T
Sbjct: 313 VLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIV-EMSKKYM--NKQIYAYFVRT 369

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             K      A   F  M +   + D   + ++++     G+   A +L     E+     
Sbjct: 370 LSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTD 429

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T  YN +   LG  ++   +  L   M+  G  P++ TY  L+  YG++GR D A++  E
Sbjct: 430 TIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFE 489

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            L +              +P  ++ NSLIN  G++    EA    + M+E GL PDVVTY
Sbjct: 490 ELENS-----------NCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTY 538

Query: 630 TTLMKALIRVDK 641
           +TL++   + DK
Sbjct: 539 STLIECFGKTDK 550



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/247 (20%), Positives = 120/247 (48%), Gaps = 20/247 (8%)

Query: 402 KPNSFIYSRI---LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
           K + FIY+R+   L+    +  +++T  +L +M+  GV+      N++I  FG    L  
Sbjct: 118 KNDPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGD---LDR 174

Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
            +    +    G+  +  ++  L+  + +    D+A  ++ +M   GY      +N++++
Sbjct: 175 CVGLVKKW---GLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLD 231

Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
            L + ++ +   ++  +M+ +   P+  TYT ++ + G++G+           +D+++  
Sbjct: 232 ALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGK-----------TDESLAL 280

Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           F+ M   G   + +A N++I A  + +   +A  +   M ENG +P+  TY+ L+  L+ 
Sbjct: 281 FQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVA 340

Query: 639 VDKFHKV 645
             + +K+
Sbjct: 341 EGQLNKL 347


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 221/485 (45%), Gaps = 33/485 (6%)

Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
           + +++++YE  ++      T +T+N ++ +C +  DLE+   +  +M++       + Y+
Sbjct: 255 MNKAQEVYETMVMHGIMP-TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 313

Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
           ++I   +++ K++ +  ++ + +++     +     N +I G+ K G   +A        
Sbjct: 314 ILINGFSKSGKMEEA--RRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEML 371

Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             G+ P T+TY   I AL   GR  +A     EL  S   P   +YN L+ GY+KM    
Sbjct: 372 NAGIYPTTSTYNIYIRALCEFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMRKFV 427

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
           +A  +  +++   + P   TY+ LID    +G  E A+ + +EM      P+   Y+ +L
Sbjct: 428 EASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC--------LHHAMAAFD 464
            G+   G      ++  EM   G++PD + Y     T G+           LH  M A D
Sbjct: 488 KGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR--TVGELRLGDSEKAFRLHEEMVAED 545

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
                   PD   +N  ID   K G  ++A E   ++   G  P   TY  +I    E+ 
Sbjct: 546 HH-----APDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKG 600

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R++  + L   M ++ L P+V+TY  L+  + ++GR +           QA      M+ 
Sbjct: 601 RFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE-----------QAFQYSTEMKK 649

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            G++P+ +  N+L++   +     EA+  L  M+E G+ P+  +YT L+     +DK+ +
Sbjct: 650 RGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEE 709

Query: 645 VFSSY 649
           V   Y
Sbjct: 710 VVKLY 714



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 210/462 (45%), Gaps = 22/462 (4%)

Query: 130 HSLLKNLCSSNSSIDLAYAVVS-------WLQ--KHNLCYSYELLYSILIHALGRSEKLY 180
           H ++  + + N+ +D  +           WL+  + N+ +S E+ Y+ILI+   +S K+ 
Sbjct: 268 HGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFS-EVTYNILINGFSKSGKME 326

Query: 181 EAFLL-SQRQR----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
           EA       QR    +TP ++N LI    +    ++A  +  +M   G +     Y++ I
Sbjct: 327 EARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYI 386

Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
           ++L    +ID +      +E+       D    N ++ G+ K     +A       +   
Sbjct: 387 RALCEFGRIDDA------RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGN 440

Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
           ++P   TY  +I  L  SG    A+ + EE+    + P    Y  LLKG+VK G L  A 
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMAT 500

Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV-SHAKPNSFIYSRILAG 414
            +  EM R G+ PD + Y+         G  E A  + +EM    H  P+  IY+  + G
Sbjct: 501 EIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDG 560

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
               G  ++  +  +++   G+ PD   Y  +I  + +      A   +D MLS+ + P 
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            IT+  LI  H K GR ++A +   EM++RG  P   T+N +++ + +    ++  R L 
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
            M  +G+ PN  +YT L+  +    ++++ ++  + + D+ +
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEI 722



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 29/373 (7%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           G  P       V+  L +S    +A+ V+E +   G+ P    +N +L    K G L+  
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           + +  EM+R  +   E TY++LI+ ++ +G+ E AR    +M+ S      + ++ ++ G
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEG 353

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y  +G +   + V  EM ++G+ P T  YN+ I    ++  +  A      +LS    PD
Sbjct: 354 YCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAR----ELLSSMAAPD 409

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +++NTL+  + K  ++  A  LF++++     P   TYN +I+ L E    E  +RL  
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV------------------ 576
            M +Q + P+V+TYTTL+  + ++G    A E  + +  + +                  
Sbjct: 470 EMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLG 529

Query: 577 ---NAFRV----MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
               AFR+    +  D   P     N  I+   +     +A    + +   GL PD VTY
Sbjct: 530 DSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTY 589

Query: 630 TTLMKALIRVDKF 642
           TT+++  +   +F
Sbjct: 590 TTVIRGYLEKGRF 602



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 144/350 (41%), Gaps = 50/350 (14%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ L+H   +  K  EA LL    +   + P  +TYN LI     + +LE A  L  +M 
Sbjct: 413 YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 472

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDG--------------- 265
               + D I Y+ +++   +   +  S+  ++Y E+    I+ DG               
Sbjct: 473 SQLIYPDVITYTTLLKGFVKNGNL--SMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGD 530

Query: 266 ---------------------QLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
                                 + N  I G  K G+  KA+ F      VGL P   TY 
Sbjct: 531 SEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYT 590

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
            VI      GR   A  +++E+    L P    Y  L+ G+ K G L+ A    +EM++ 
Sbjct: 591 TVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKR 650

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
           GV P+  T++ L+     AG  + A   L +ME     PN + Y+ +++ + D  +W+  
Sbjct: 651 GVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEV 710

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
            ++ KEM    +EPD + +  +     K     H   A D   S G +P+
Sbjct: 711 VKLYKEMLDKEIEPDGYTHRALFKHLEK----DHESMALD---SSGKQPE 753



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 15/294 (5%)

Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
           Y K    +       +M R G LP     ++++    ++     A+ V + M +    P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
              ++ +L      G+ +R  ++  EMK   +E     YN++I+ F K   +  A     
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
            M   G      ++N LI+ + K G +D A  + +EM   G +P T+TYNI I  L E  
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
           R +D + LL +M A    P+VV+Y TL+  Y +  +F +A    + L    +N       
Sbjct: 394 RIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNIN------- 442

Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
               PS +  N+LI+   E      A  + + M    + PDV+TYTTL+K  ++
Sbjct: 443 ----PSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVK 492


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 195/441 (44%), Gaps = 42/441 (9%)

Query: 153 LQKHNLCYSYELLYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARND 207
           L   N C    + +S +I A      + EA   F   Q   L+P    YN L+S   +  
Sbjct: 338 LMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKAR 397

Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
           D+ +A  L  +MR  G   D   +++++    +  K   S   +L+++     +  D  L
Sbjct: 398 DVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADS--YELFRDWSLSSLVPDCSL 455

Query: 268 LNDVIVGFAKAGDASKAMRFL------GMAQGV--------------------------- 294
            +  + G   AG   +AM+FL      GM   V                           
Sbjct: 456 YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515

Query: 295 --GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
             GL P ++T ++++  LS  GR  EA  +  ++ + GL     A+  LL GY K+G   
Sbjct: 516 MFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTA 575

Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            A  +  EME  G+ PD   +S  ID  + AG  E A     EM      PN+F+Y+ ++
Sbjct: 576 GAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLI 635

Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
            G  + G+     ++ +EM+  G+ PD    N++I+ F K   +  A  AF  M   G+ 
Sbjct: 636 HGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVT 695

Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
           PDT+T+NTLI  + K      A+E   +M   G+ P  TTYNI I      ++      +
Sbjct: 696 PDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTM 755

Query: 533 LGNMRAQGLLPNVVTYTTLVD 553
           L  + A G++PN VTY T+++
Sbjct: 756 LDELIAVGVVPNTVTYNTMMN 776



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 208/476 (43%), Gaps = 18/476 (3%)

Query: 166 YSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI+A    GR+        L  +    P  +T++ +I+A     ++ +A  +   ++
Sbjct: 316 YNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G   +   Y+ ++    +   +  +    LY+E+    I  DG   N ++ G  K G 
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQA--NMLYEEMRDKGIAPDGATFNILVAGNYKYGK 433

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + +           L P  + Y   +  L  +G+  EA    E++ E G+ P   A+N+
Sbjct: 434 EADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNS 493

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y + G+  +A      M   G++P   T S ++   +  GR + AR +L +M    
Sbjct: 494 VIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKG 553

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N   ++ +L GY   G+      +  EM++ G+ PD   ++  ID   K   +  A 
Sbjct: 554 LPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAY 613

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
            AF  M  +G  P+   +N+LI     CG+   A +L  EM+++G  P   T NI+IN  
Sbjct: 614 EAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGF 673

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++ R +        M   G+ P+ VTY TL+   G   +  D +      +D+ +N   
Sbjct: 674 CKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLI---GGYCKVLDMVS-----ADEFLNK-- 723

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G  P     N  I  F   Q+ + A  +L  +   G+ P+ VTY T+M A+
Sbjct: 724 -MYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAV 778



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 216/532 (40%), Gaps = 77/532 (14%)

Query: 152 WLQKHNLCYSYELLYSIL---IHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISAC 203
           W   H     YE  +SIL   +     SE  YE+  +  R R   +       + L    
Sbjct: 198 WANHHK----YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLL 253

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN--KIDSSLLQKLYKEIECDKI 261
            R  D      L+  M +DG      N++++I    +    ++  SLL  + K       
Sbjct: 254 LRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFC----C 309

Query: 262 ELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEA 321
           E D    N +I  +   G  S A+ FL +    G  P   T++ +ITA  N G  +EA  
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369

Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
           +FE ++E GL P    YN L+ GY K   +  A  +  EM   G+ PD  T+++L+    
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILV---- 425

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
                                          AG    G+   ++++ ++   S + PD  
Sbjct: 426 -------------------------------AGNYKYGKEADSYELFRDWSLSSLVPDCS 454

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+V +        L  AM   + ML +G+ P  + +N++I  + + G  D A + ++ M
Sbjct: 455 LYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIM 514

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG-- 559
              G  P ++T + M+  L ++ R ++ + LL  M  +GL  N V +T L+D Y + G  
Sbjct: 515 LMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDT 574

Query: 560 --------------------RFDDAIECLE--GLSDQAVNAFRVMRTDGLKPSNLALNSL 597
                                F   I+ L   GL ++A  AF  M   G  P+N   NSL
Sbjct: 575 AGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSL 634

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           I+      +  EA  + + M++ GL PD+ T   ++    +  +    F ++
Sbjct: 635 IHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAF 686



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 17/452 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            YN LI+A         AL  +  M ++G     I +S +I +      +  +  +K+++
Sbjct: 315 AYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEA--RKIFE 372

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            I+   +  +  + N ++ G+ KA D  +A       +  G++P  AT+  ++      G
Sbjct: 373 GIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYG 432

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  ++  +F +   S L P    Y+  + G    G L +A   + +M   G+ P    ++
Sbjct: 433 KEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN 492

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            +I AY+ AG  ++A    K M +    P+S   S +L G   +G  Q    +L +M   
Sbjct: 493 SVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDK 552

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+  +   + V++D + K      A + +  M + GI PD I ++  ID   K G  + A
Sbjct: 553 GLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEA 612

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            E F EM ++G+ P    YN +I+ L    +  +  +L   MR +GLLP++ T   +++ 
Sbjct: 613 YEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIING 672

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE--DQRDAEAFA 612
           +           C EG    A +AF  M   G+ P  +  N+LI  + +  D   A+ F 
Sbjct: 673 F-----------CKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEF- 720

Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
            L  M  +G  PD+ TY   ++      K  +
Sbjct: 721 -LNKMYASGWDPDITTYNIRIQGFCSSQKISR 751



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 136/300 (45%), Gaps = 3/300 (1%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           T ++++   ++   L++A +L+ KM   G   + + +++++    +    D++    L+ 
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVG--DTAGAHSLWY 582

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+E   I  D    +  I G +KAG   +A          G  P    Y ++I  L N G
Sbjct: 583 EMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCG 642

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           +  EA  +  E+++ GL P     N ++ G+ K G +K A    +EM   GV PD  TY+
Sbjct: 643 KLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
            LI  Y       SA   L +M  S   P+   Y+  + G+    +  R   +L E+ + 
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV P+T  YN M++     + L  AM    ++L     P+ +T N L+    K G  ++A
Sbjct: 763 GVVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821


>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 191/374 (51%), Gaps = 16/374 (4%)

Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
           G+L++ +I    + G+ + A+R    A+  G      +++A+I+A   +G   +A  +F 
Sbjct: 178 GKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFR 237

Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYA 381
            ++  G+ P   +YN+L+    K G + D + VV    EM   G++PD  TY+ L+   A
Sbjct: 238 SMRSWGVYPNLISYNSLIDAGAK-GEV-DFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCA 295

Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
           + G WE+A+ +L EM+      ++F Y+  L      G+     +VL+EM S  V P   
Sbjct: 296 SKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVV 355

Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
            Y+ MID   K N L  A+  ++ M    I  D +++NT++  + K GR+D A    +EM
Sbjct: 356 TYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEM 415

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +  G      TYN +++  G    +++V+RL   M+A  + PN +TY+T++D+Y + G F
Sbjct: 416 ESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMF 475

Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
            +A++  +      +    V  T           S+I++  ++     +  +L  M E G
Sbjct: 476 QEAMDVYKDFKKAQLEVDVVFYT-----------SIIDSLCKNGLVESSIMLLIAMIEKG 524

Query: 622 LKPDVVTYTTLMKA 635
           +KP+VVT+ +++ A
Sbjct: 525 IKPNVVTFNSIIDA 538



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 214/498 (42%), Gaps = 56/498 (11%)

Query: 165 LYSILIHALGRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKM 219
           L S +I  LGR  ++  A  L +  RL     T  +++A+ISA  RN     A++L   M
Sbjct: 180 LVSTMIGTLGRLGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSM 239

Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
           R  G + + I+Y+ +I +  +  ++D  ++ K + E+  +                    
Sbjct: 240 RSWGVYPNLISYNSLIDAGAK-GEVDFDVVVKFFDEMLAE-------------------- 278

Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                          G+ P   TY ++++  ++ G    A+ +  E+ + G+      YN
Sbjct: 279 ---------------GIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYN 323

Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
             L    K G +  A  V+ EM    V P   TYS +ID  A A   E A  + +EM++ 
Sbjct: 324 TYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLR 383

Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
               +   Y+ ++  Y   G +       KEM+S G++ D   YN ++  +G+Y      
Sbjct: 384 SISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEV 443

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F+ M +  I P+T+T++T+ID + K G +  A +++++ ++         Y  +I+ 
Sbjct: 444 RRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDS 503

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
           L +    E    LL  M  +G+ PNVVT+ +++D   QS   +  +       +      
Sbjct: 504 LCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQL 563

Query: 580 RVMRTDGLKPSNLALNSLINAF--------GEDQRDAEA-------FAVLQYMKENGLKP 624
             M  DG   +    + ++  F        G  ++D +          + Q M E  +KP
Sbjct: 564 SSMLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQDQHCILWLFQKMHELNIKP 623

Query: 625 DVVTYTTLMKALIRVDKF 642
           +VVT++ ++ A  R + F
Sbjct: 624 NVVTFSAILNACSRCNSF 641



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 195/465 (41%), Gaps = 80/465 (17%)

Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSE-------KLYEAFLLSQRQRLTP- 193
           ++DL  ++ SW    NL     + Y+ LI A  + E       K ++  L    + + P 
Sbjct: 232 AVDLFRSMRSWGVYPNL-----ISYNSLIDAGAKGEVDFDVVVKFFDEMLA---EGIVPD 283

Query: 194 -LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            LTYN+L+S CA     E A  L+S+M Q G   D   Y+  + +L +  +ID  L +++
Sbjct: 284 RLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQID--LARRV 341

Query: 253 YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            +E+   ++                                    P   TY+ +I   + 
Sbjct: 342 LEEMSSRRVW-----------------------------------PTVVTYSTMIDGCAK 366

Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
           +    +A  ++EE+K   +     +YN ++  Y K+G   +A     EME  G+  D  T
Sbjct: 367 ANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVT 426

Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
           Y+ L+  Y   G ++  R + +EM+  +  PN+  YS ++  Y   G +Q    V K+ K
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFK 486

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC-------- 484
            + +E D  FY  +ID+  K   +  ++     M+ +GI+P+ +T+N++ID         
Sbjct: 487 KAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLE 546

Query: 485 ---HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--------GEQERWEDVKR-- 531
              H      +   E    M   G F   T  + ++ +         G +E+    ++  
Sbjct: 547 YGVHGSSQAVEYPTEQLSSMLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQDQ 606

Query: 532 -----LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
                L   M    + PNVVT++ +++   +   F+DA   L  L
Sbjct: 607 HCILWLFQKMHELNIKPNVVTFSAILNACSRCNSFEDASMLLGAL 651



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 16/354 (4%)

Query: 303 YAAVITALSNSGRTIEAEAVFEEL--KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
           Y  ++    N+G  + A   F+ +  K++G   + K  + ++    ++G +  A  +   
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVSTMIGTLGRLGEINHALRLFES 203

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL-AGYRDRG 419
               G     +++S +I AY   G +  A  + + M      PN   Y+ ++ AG +   
Sbjct: 204 ARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEV 263

Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
           ++    +   EM + G+ PD   YN ++           A      M  +GI  D  T+N
Sbjct: 264 DFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYN 323

Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
           T +D   K G+ D A  + EEM  R  +P   TY+ MI+   +    ED   L   M+ +
Sbjct: 324 TYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLR 383

Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAI-ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
            +  + V+Y T+V IY + GRFD+AI +C E            M + G+K   +  N+L+
Sbjct: 384 SISVDRVSYNTMVGIYAKLGRFDEAIGQCKE------------MESCGMKRDVVTYNALL 431

Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
           + +G      E   + + MK   + P+ +TY+T++    +   F +    Y  F
Sbjct: 432 SGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDF 485



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 22/333 (6%)

Query: 338 YNALLKGYVKMGYL----KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
           Y  +LK +   G+     K  +F++   +++G +      S +I      G    A  + 
Sbjct: 144 YIYMLKEFGNTGHFLLATKCFDFII--WKQNGRIAKGKLVSTMIGTLGRLGEINHALRLF 201

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
           +   +       + +S +++ Y   G +     + + M+S GV P+   YN +ID   K 
Sbjct: 202 ESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKG 261

Query: 454 NC-LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
                  +  FD ML+EGI PD +T+N+L+      G ++ A++L  EM ++G      T
Sbjct: 262 EVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFT 321

Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
           YN  ++ L +  + +  +R+L  M ++ + P VVTY+T++D   ++   +DA+   E + 
Sbjct: 322 YNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMK 381

Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
            ++++  RV           + N+++  + +  R  EA    + M+  G+K DVVTY  L
Sbjct: 382 LRSISVDRV-----------SYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNAL 430

Query: 633 MKALIR---VDKFHKVFSSYLFFNIY-KMLSYS 661
           +    R    D+  ++F     +NIY   L+YS
Sbjct: 431 LSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYS 463



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/428 (20%), Positives = 189/428 (44%), Gaps = 36/428 (8%)

Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHA--LGRSEK 178
           VP  L ++ L ++C+S    + A  ++S + +  +    ++Y      L     +  + +
Sbjct: 281 VPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARR 340

Query: 179 LYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
           + E  + S+R   T +TY+ +I  CA+ + LE ALNL  +M+      D ++Y+ ++   
Sbjct: 341 VLEE-MSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIY 399

Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
            +  + D ++ Q   KE+E   ++ D    N ++ G+ + G   +  R     +   + P
Sbjct: 400 AKLGRFDEAIGQ--CKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYP 457

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
            T TY+ +I   +  G   EA  V+++ K++ L+     Y +++    K G ++ +  ++
Sbjct: 458 NTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLL 517

Query: 359 SEMERSGVLPDEHTYSLLIDAYANA-----GRWESARIV------LKEMEVSHAKPNSFI 407
             M   G+ P+  T++ +IDA   +     G   S++ V      L  M +  A  N   
Sbjct: 518 IAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLSSMLIDGAFQNKTG 577

Query: 408 YSRIL----------AGYRDRGEWQRTFQ-----VLKEMKSSGVEPDTHFYNVMIDTFGK 452
             RIL          AG+R++    R  Q     + ++M    ++P+   ++ +++   +
Sbjct: 578 DDRILKMFEQLAAEKAGHREKDRKGRQDQHCILWLFQKMHELNIKPNVVTFSAILNACSR 637

Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
            N    A      +     +   +T   L+   ++   + +A+ LF+EM+       +  
Sbjct: 638 CNSFEDASMLLGALRLFDNQVYGVTHGLLMG--YREQVWFQAQTLFDEMRRMDSSTASAF 695

Query: 513 YNIMINLL 520
           YN + ++L
Sbjct: 696 YNALTDML 703


>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
 gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 166/318 (52%), Gaps = 11/318 (3%)

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
           +E+   P   AYN +++  ++    + A  +  EM +  + PD +TYS LI  +   G +
Sbjct: 147 EEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMF 206

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
           +SA   L++ME      +  +YS ++   R   ++ +   +   +K SG+ PD   YN M
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSM 266

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I+ FGK      A      M + G+ PDT++++TL+  + + G+Y  A  +F EM E   
Sbjct: 267 INVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRC 326

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
               TT N+MI++ G+ +  ++  RL  +MR  G+ P +V+Y TL+ +YG++  F +AI 
Sbjct: 327 PLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAI- 385

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
                     + FR+M+   ++ + +  N++I  +G+     +A  ++Q M+  G++P+ 
Sbjct: 386 ----------HLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNA 435

Query: 627 VTYTTLMKALIRVDKFHK 644
           +TY+T++    +  K  +
Sbjct: 436 ITYSTIISIWDKAGKLDR 453



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 18/355 (5%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            L+P   TY+ +IT     G    A +  +++++  +      Y+ L++   K+     A
Sbjct: 185 ALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKA 244

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             + S ++RSG+ PD   Y+ +I+ +  A  +  AR++L EM      P++  YS +L+ 
Sbjct: 245 ISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSM 304

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y + G++     V  EM       D    NVMID +G+ +    A   F  M   GIEP 
Sbjct: 305 YVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPG 364

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
            +++NTL+  + +   +  A  LF  MQ +       TYN MI + G+    E    L+ 
Sbjct: 365 IVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQ 424

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M+ +G+ PN +TY+T++ I+ ++G+            D+A   F+ +R+ G++   +  
Sbjct: 425 EMQNRGIEPNAITYSTIISIWDKAGKL-----------DRAAMLFQKLRSSGIEIDQVLY 473

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV---TYTTLMKALIRVDKFHKVF 646
            ++I A+      A A  +L  +K    +PD +   T  T++    R+++   VF
Sbjct: 474 QTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWVF 524



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 191/460 (41%), Gaps = 25/460 (5%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQK 251
             YN +I    R    E A  L  +MRQ     D   YS +I    +    DS+L  LQK
Sbjct: 156 FAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQK 215

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +    E D++  D  L +++I    K  D SKA+      +  G+SP    Y ++I    
Sbjct: 216 M----EQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFG 271

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
            +    EA  +  E++  G+ P T +Y+ LL  YV+ G   +A  V SEM       D  
Sbjct: 272 KAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLT 331

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           T +++ID Y      + A  +   M     +P    Y+ +L  Y +   +     + + M
Sbjct: 332 TCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLM 391

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAA--FDRMLSEGIEPDTITWNTLIDCHFKCG 489
           +   +E +   YN MI  +GK   L H  A      M + GIEP+ IT++T+I    K G
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGK--SLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAG 449

Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
           + DRA  LF++++  G       Y  MI            KRLL  ++     P+ +   
Sbjct: 450 KLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRE 505

Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
           T + I   +GR ++A         QA +A       G          +I+ F  +++   
Sbjct: 506 TAITILAGAGRIEEATWVFR----QAFDA-------GEVKDITVFGCMIDLFSRNRKHTN 554

Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              V   M+  G  PD      ++ A  ++ +F K  + Y
Sbjct: 555 VIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIY 594



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 217/479 (45%), Gaps = 22/479 (4%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEK--LYEAFLLSQRQR-LTP--LTYNALISA 202
           A++ W+ +          Y+++I  + R+++  L        RQR L P   TY+ LI+ 
Sbjct: 140 ALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITH 199

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
             +    + AL+ + KM QD    D + YS +I+ L+R    D S    ++  ++   I 
Sbjct: 200 FGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE-LSR-KLCDYSKAISIFSRLKRSGIS 257

Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
            D    N +I  F KA    +A   L   +  G+ P T +Y+ +++    +G+ +EA +V
Sbjct: 258 PDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSV 317

Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
           F E+ E          N ++  Y ++   K+A+ +   M + G+ P   +Y+ L+  Y  
Sbjct: 318 FSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGE 377

Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
           A  +  A  + + M+    + N   Y+ ++  Y    E ++   +++EM++ G+EP+   
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 437

Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
           Y+ +I  + K   L  A   F ++ S GIE D + + T+I  + + G    A+ L  E++
Sbjct: 438 YSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 497

Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
                P  T     I +L    R E+   +       G + ++  +  ++D++ ++ +  
Sbjct: 498 RPDNIPRETA----ITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHT 553

Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
           + IE            F  MR  G  P +  +  ++NA G+ +   +A A+ + M+E G
Sbjct: 554 NVIEV-----------FDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEG 601



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/468 (20%), Positives = 198/468 (42%), Gaps = 40/468 (8%)

Query: 148 AVVSWLQK--HNLCYSYELLYSILI---HALGRSEKLYEAFLLSQRQRLTP--LTYNALI 200
           + +SWLQK   +      +LYS LI     L    K    F   +R  ++P  + YN++I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMI 267

Query: 201 SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDK 260
           +   +     +A  L+ +MR  G   D ++YS ++       K   +L   ++ E+   +
Sbjct: 268 NVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEAL--SVFSEMNEVR 325

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
             LD    N +I  + +   A +A R     + +G+ P   +Y  ++     +    EA 
Sbjct: 326 CPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAI 385

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY 380
            +F  ++   ++     YN ++K Y K    + A  +V EM+  G+ P+  TYS +I  +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIW 445

Query: 381 ANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK-------- 432
             AG+ + A ++ +++  S  + +  +Y  ++  Y   G      ++L E+K        
Sbjct: 446 DKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRE 505

Query: 433 -----------------------SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
                                   +G   D   +  MID F +     + +  FD+M   
Sbjct: 506 TAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGA 565

Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
           G  PD+     +++   K   +++A+ +++EM+E G       +  M++L G +  ++ V
Sbjct: 566 GYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMV 625

Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
             L   + +   +     +  +  IY ++ R +DA + +  + ++ ++
Sbjct: 626 DSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMRERGIS 673



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 24/172 (13%)

Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
           +E  Y P    YN++I  +   ++WE    L   MR + L P+  TY+TL+  +G+ G F
Sbjct: 147 EEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMF 206

Query: 562 DDAIECLEGLSD------------------------QAVNAFRVMRTDGLKPSNLALNSL 597
           D A+  L+ +                          +A++ F  ++  G+ P  +A NS+
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSM 266

Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
           IN FG+ +   EA  +L  M+  G+ PD V+Y+TL+   +   K+ +  S +
Sbjct: 267 INVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVF 318


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 209/479 (43%), Gaps = 23/479 (4%)

Query: 166 YSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ LI  L    ++ +A  L     R+   P  +TY  L+ A  RN   E+A+ ++ +MR
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G   + + Y+++I  + R  ++D +  ++L   +     + D      ++ G   +  
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDA--RELLNRLPSYGFQPDTVSYTTLLKGLCASKR 263

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                            P   T+  +I      G    A  V E++ E G    T   N 
Sbjct: 264 WDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNI 323

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++    K G + DA  ++++M   G  PD  +Y+ ++     A RW+ A+ +L EM  ++
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH-HA 459
             PN   ++  +     +G  ++   ++++M   G       YN +++ F    C+  H 
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF----CVQGHI 439

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
            +A +   S   +P+TIT+ TL+       R D A EL  EM      P   T+N++++ 
Sbjct: 440 DSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSF 499

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             ++   E+   L+  M   G  PN++TY TL+D   +    +DA+E L GL  +     
Sbjct: 500 FCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK----- 554

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
                 G+ P  +  +S+I    ++ R  EA  +   +++ G++P  V Y  ++  L +
Sbjct: 555 ------GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCK 607



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/524 (22%), Positives = 223/524 (42%), Gaps = 20/524 (3%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ 187
           L   L++NLC    + D A  + +     +    +   Y+ L+    R   L  A  L  
Sbjct: 78  LCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA--YNTLVAGYCRYGHLDAARRLIG 135

Query: 188 RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
              + P   TY  LI        +  AL+L+  M + G   + + Y+++++++ R +  +
Sbjct: 136 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFE 195

Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
            ++   +  E+       +    N +I G  + G    A   L      G  P T +Y  
Sbjct: 196 QAM--AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTT 253

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L  S R  + E +F E+ E    P    ++ L++ + + G ++ A  V+ +M   G
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
              +    +++I++    GR + A  +L +M      P++  Y+ +L G      W    
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAK 373

Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
           ++L EM  +   P+   +N  I    +   +  A+   ++M   G     +T+N L++  
Sbjct: 374 ELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433

Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
              G  D A ELF  M  +   P T TY  ++  L   ER +    L+  M      PNV
Sbjct: 434 CVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNV 490

Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
           VT+  LV  + Q G  ++AIE +E + +            G  P+ +  N+L++   +D 
Sbjct: 491 VTFNVLVSFFCQKGFLEEAIELVEQMMEH-----------GCTPNLITYNTLLDGITKDC 539

Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
              +A  +L  +   G+ PDV+T+++++  L + D+  +    +
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLF 583



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 14/313 (4%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G  P       L++   + G   DA  V+   E SG   D   Y+ L+  Y   G  ++A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
           R ++  M V+   P+++ Y+ ++    DRG       +L +M   G +P+   Y V+++ 
Sbjct: 131 RRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
             + +    AMA  D M ++G  P+ +T+N +I+   + GR D A EL   +   G+ P 
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
           T +Y  ++  L   +RW+DV+ L   M  +  +PN VT+  L+  + + G  + AI+ LE
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
            +++            G   +    N +IN+  +  R  +AF +L  M   G  PD ++Y
Sbjct: 308 QMTEH-----------GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISY 356

Query: 630 TTLMKALIRVDKF 642
           TT++K L R +++
Sbjct: 357 TTVLKGLCRAERW 369



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 171/417 (41%), Gaps = 46/417 (11%)

Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG---------------------- 295
           CD    D  L   +I    + G  S A R L  A+G G                      
Sbjct: 69  CDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 128

Query: 296 ----------LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGY 345
                     ++P   TY  +I  L + GR  +A ++ +++   G +P    Y  LL+  
Sbjct: 129 AARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAM 188

Query: 346 VKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNS 405
            +    + A  V+ EM   G  P+  TY+++I+     GR + AR +L  +     +P++
Sbjct: 189 CRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT 248

Query: 406 FIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDR 465
             Y+ +L G      W    ++  EM      P+   ++++I  F +   +  A+   ++
Sbjct: 249 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
           M   G   +T   N +I+   K GR D A +L  +M   G  P T +Y  ++  L   ER
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
           W+D K LL  M      PN VT+ T + I  Q G  + AI  +E +S+            
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEH----------- 417

Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
           G     +  N+L+N F        A  + + M     KP+ +TYTTL+  L   ++ 
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERL 471



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 217/512 (42%), Gaps = 24/512 (4%)

Query: 72  DDVL--SLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLW 129
           DD+L    Q     +T LL  +  NS  E A A+      L+ +  K        P  + 
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV------LDEMRAK-----GCTPNIVT 215

Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEK---LYEAFLLS 186
           ++++ N       +D A  +++ L  +       + Y+ L+  L  S++   + E F   
Sbjct: 216 YNVIINGMCREGRVDDARELLNRLPSYGF-QPDTVSYTTLLKGLCASKRWDDVEELFAEM 274

Query: 187 QRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI 244
             +   P  +T++ LI    R   +E+A+ ++ +M + G   +    ++VI S+ +  ++
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
           D +   KL  ++       D      V+ G  +A     A   L         P   T+ 
Sbjct: 335 DDAF--KLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFN 392

Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
             I  L   G   +A  + E++ E G       YNAL+ G+   G++  A  +   M   
Sbjct: 393 TFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK 452

Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              P+  TY+ L+    NA R + A  ++ EM      PN   ++ +++ +  +G  +  
Sbjct: 453 ---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEA 509

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
            +++++M   G  P+   YN ++D   K      A+     ++S+G+ PD IT++++I  
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
             K  R + A +LF  +Q+ G  P    YN ++  L ++   ++       M + G +PN
Sbjct: 570 LSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPN 629

Query: 545 VVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
             TY  L++     G   +A + L  L  + V
Sbjct: 630 ESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 12/419 (2%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLSQ 187
           + +LLK LC+S    D+       ++K+  C   E+ + +LI    R   +  A  +L Q
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKN--CMPNEVTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 188 RQRLTPLT----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
                  T     N +I++  +   ++ A  L++ M   G + D I+Y+ V++ L R  +
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            D +  ++L  E+  +    +    N  I    + G   +A+  +      G +    TY
Sbjct: 369 WDDA--KELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
            A++      G    A  +F  +     KP T  Y  LL G      L  A  +V+EM R
Sbjct: 427 NALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               P+  T+++L+  +   G  E A  ++++M      PN   Y+ +L G       + 
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
             ++L  + S GV PD   ++ +I    K + +  A+  F  +   G+ P  + +N ++ 
Sbjct: 544 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILL 603

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
              K    D A + F  M   G  P  +TY I+I  L  +   ++ + LL  + ++G+L
Sbjct: 604 GLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/505 (23%), Positives = 232/505 (45%), Gaps = 26/505 (5%)

Query: 144 DLAYAVVSWLQKHNLC---YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNA 198
           DL  A+V  L K+ L    +SY L+Y  +    G  +K +  FL    Q + P  L  N+
Sbjct: 193 DLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD--GEVDKAHCLFLEMMEQGVLPKILICNS 250

Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
           +I    +  +++KA +++ KM   G   D   YSL+I  L ++  +D +  +++ +++  
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKA--ERVLEQMVE 308

Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
                +    N +I G++ +G  ++++R        G+ P      + I AL   GRT E
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 319 AEAVFEELKESGLKPRTKAYNA----LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           A+ +F+ +   G KP   +Y+     +   YV + ++     + + M   G+ P++H ++
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVM-WHNIFNLMLTKGIAPNKHVFN 427

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LI+AYA  G  + A ++ ++M+     P++  ++ +++     G           M   
Sbjct: 428 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 487

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW-NTLIDCHFKCGRYDR 493
           GV P    Y  +I     +  L  A      M+++ I P  + + +++I+   K GR   
Sbjct: 488 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 547

Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            +++ + M + G  P   T+N ++         E+   LL  M + G+ PN   Y TLVD
Sbjct: 548 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 607

Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
            Y ++GR DDA+             FR M   G+KP+++  + +++   + +R   A  +
Sbjct: 608 GYCKNGRIDDAL-----------TVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKM 656

Query: 614 LQYMKENGLKPDVVTYTTLMKALIR 638
              M E+G    + TY  ++  L R
Sbjct: 657 FHEMIESGTTVSIHTYGVVLGGLCR 681



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 172/391 (43%), Gaps = 49/391 (12%)

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
           GL P   +Y+ +I      G   +A  +F E+ E G+ P+    N+++K   KM  +  A
Sbjct: 206 GLGPDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKA 264

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
           E +V +M  SG+ PD  TYSL+ID    +   + A  VL++M  +  +PNS  Y+ ++ G
Sbjct: 265 ESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHG 324

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           Y   G W  + +V K+M S GV P     N  I    K+   + A   FD M+ +G +PD
Sbjct: 325 YSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPD 384

Query: 475 ----------------TITW----------------------NTLIDCHFKCGRYDRAEE 496
                           T+ W                      N LI+ + +CG  D+A  
Sbjct: 385 IISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAML 444

Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
           +FE+MQ +G  P T T+  +I+ L    R +D      +M   G+ P+   Y  L+    
Sbjct: 445 IFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCC 504

Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
             G    A E +            +M  D   P     +S+IN   ++ R AE   ++  
Sbjct: 505 NHGELVKAKELIS----------EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDM 554

Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
           M + G +P+VVT+ +LM+    V    + F+
Sbjct: 555 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 585



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/489 (23%), Positives = 212/489 (43%), Gaps = 38/489 (7%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
           TYN LI    R    +  L ++ ++ ++G   D  +YSL I    +  ++D +    L+ 
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSL-IYGFVKDGEVDKA--HCLFL 234

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           E+    +     + N +I    K  +  KA   +      G++P   TY+ +I  L  S 
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
              +AE V E++ E+G +P +  YN+L+ GY   G   ++  V  +M   GV+P     +
Sbjct: 295 AMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS---RILAGYRDRGEWQRTFQVLKEM 431
             I A    GR   A+ +   M +   KP+   YS     +  +     W     +   M
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLM 414

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            + G+ P+ H +N++I+ + +   +  AM  F+ M ++G+ PDT+T+ T+I    + GR 
Sbjct: 415 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 474

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT- 550
           D A   F  M + G  P    Y  +I            K L+  M  + + P  V Y + 
Sbjct: 475 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 534

Query: 551 ----------------LVDIYGQSGR------FDDAIE--CLEGLSDQAVNAFRVMRTDG 586
                           ++D+  Q+G+      F+  +E  CL G  ++A      M + G
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594

Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK----- 641
           ++P+     +L++ + ++ R  +A  V + M   G+KP  V Y+ ++  L +  +     
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 654

Query: 642 --FHKVFSS 648
             FH++  S
Sbjct: 655 KMFHEMIES 663



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 14/386 (3%)

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
           +CY Y  +  ++ H +         F L   + + P    +N LI+A AR   ++KA+ +
Sbjct: 395 VCYWYVTVVWVMWHNI---------FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 445

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
              M+  G   D + ++ VI SL R  ++D +L  K    ++   +     +   +I G 
Sbjct: 446 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL-HKFNHMVDIG-VPPSEAVYGCLIQGC 503

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATY-AAVITALSNSGRTIEAEAVFEELKESGLKPR 334
              G+  KA   +       + P    Y +++I  L   GR  E + + + + ++G +P 
Sbjct: 504 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 563

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
              +N+L++GY  +G +++A  ++  M   G+ P+ + Y  L+D Y   GR + A  V +
Sbjct: 564 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 623

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           +M     KP S +YS IL G           ++  EM  SG     H Y V++    + N
Sbjct: 624 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 683

Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
           C   A    +++ +  ++ D IT+N +I   FK GR   A+ELF+ +   G  P   TY+
Sbjct: 684 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 743

Query: 515 IMINLLGEQERWEDVKRLLGNMRAQG 540
           +MI  L ++E +E+   L  ++   G
Sbjct: 744 MMITNLIKEESYEEADNLFISVEKSG 769



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/595 (21%), Positives = 249/595 (41%), Gaps = 72/595 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLC---YSYELLYSILIH--ALGRSEKLYEA 182
           + +S++K LC     +D A ++V  +    +    ++Y L+   L    A+ ++E++ E 
Sbjct: 247 ICNSIIKELCKM-KEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQ 305

Query: 183 FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL---T 239
            ++    R   +TYN+LI   + +    +++ +  +M   G      N +  I +L    
Sbjct: 306 -MVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 364

Query: 240 RTNK----IDSSLLQ-----------------------------KLYKEIECDKIELDGQ 266
           RTN+     DS +L+                              ++  +    I  +  
Sbjct: 365 RTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKH 424

Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
           + N +I  +A+ G   KAM      Q  G+ P T T+A VI++L   GR  +A   F  +
Sbjct: 425 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 484

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANAGR 385
            + G+ P    Y  L++G    G L  A+ ++SEM    + P    Y S +I+     GR
Sbjct: 485 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 544

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
               + ++  M  +  +PN   ++ ++ GY   G  +  F +L  M S G+EP+ + Y  
Sbjct: 545 VAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGT 604

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D + K   +  A+  F  ML +G++P ++ ++ ++   F+  R   A+++F EM E G
Sbjct: 605 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 664

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
                 TY +++  L      ++   LL  + A  +  +++T+  ++    + GR  +A 
Sbjct: 665 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 724

Query: 566 ECLEGLS------------------------DQAVNAFRVMRTDGLKPSNLALNSLINAF 601
           E  + +S                        ++A N F  +   G    +  LN ++   
Sbjct: 725 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 784

Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK----VFSSYLFF 652
                 A+A   L  + EN L  +  T + L     R  K+ +    + + Y FF
Sbjct: 785 LNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPAKYQFF 839



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 136/309 (44%), Gaps = 34/309 (11%)

Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
           P  HTY++LID Y    R +    ++  +  +   P+ F YS ++ G+   GE  +   +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
             EM   GV P     N +I    K   +  A +   +M+  GI PD  T++ +ID   K
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
               D+AE + E+M E G  P + TYN +I+       W +  R+   M + G++P V  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 548 YTTLVDIYGQSGRFDDAIEC------LEGLSDQAV----------------------NAF 579
             + +    + GR ++A +C      L+G     +                      N F
Sbjct: 353 CNSFIHALFKHGRTNEA-KCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIF 411

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
            +M T G+ P+    N LINA+       +A  + + M+  G+ PD VT+ T++ +L R+
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 640 ----DKFHK 644
               D  HK
Sbjct: 472 GRLDDALHK 480


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 207/451 (45%), Gaps = 29/451 (6%)

Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
           YN L+ +C +   +E    L   M   G       ++L+I++L  ++ +D++  ++L+ E
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA--RELFDE 172

Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
           +     + +      ++ G+ KAG   K +  L   +  G+ P    Y  ++++    GR
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR 232

Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL----PDEH 371
             ++E + E+++E GL P    +N+ +    K G + DA  + S+ME    L    P+  
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY+L++  +   G  E A+ + + +  +    +   Y+  L G    G++     VLK+M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
              G+ P  + YN+++D   K   L  A      M   G+ PD +T+  L+  +   G+ 
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           D A+ L +EM      P   T NI+++ L +  R  + + LL  M  +G   + VT   +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           VD    SG  D AIE ++G           MR  G    + AL +L N++     D+   
Sbjct: 473 VDGLCGSGELDKAIEIVKG-----------MRVHG----SAALGNLGNSYIGLVDDS--- 514

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
                + EN   PD++TY+TL+  L +  +F
Sbjct: 515 -----LIENNCLPDLITYSTLLNGLCKAGRF 540



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 220/511 (43%), Gaps = 78/511 (15%)

Query: 163 ELLYSILIHALGR------SEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALN 214
           +++Y+ ++ +  R      SEK+ E     + + L P  +T+N+ ISA  +   +  A  
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKM---REEGLVPDIVTFNSRISALCKEGKVLDASR 273

Query: 215 LMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVG 274
           + S M  D Y             L R N I  +L+ K                      G
Sbjct: 274 IFSDMELDEY-----------LGLPRPNSITYNLMLK----------------------G 300

Query: 275 FAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPR 334
           F K G    A       +         +Y   +  L   G+ IEAE V +++ + G+ P 
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360

Query: 335 TKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLK 394
             +YN L+ G  K+G L DA+ +V  M+R+GV PD  TY  L+  Y + G+ ++A+ +L+
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420

Query: 395 EMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN 454
           EM  ++  PN++  + +L      G      ++L++M   G   DT   N+++D      
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480

Query: 455 CLH-----------HAMAAF------------DRMLSEGIEPDTITWNTLIDCHFKCGRY 491
            L            H  AA             D ++     PD IT++TL++   K GR+
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
             A+ LF EM      P +  YNI I+   +Q +     R+L +M  +G   ++ TY +L
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
           +   G      + I  + GL D+       M+  G+ P+    N+ I    E ++  +A 
Sbjct: 601 ILGLG----IKNQIFEIHGLMDE-------MKEKGISPNICTYNTAIQYLCEGEKVEDAT 649

Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
            +L  M +  + P+V ++  L++A  +V  F
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 15/314 (4%)

Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
           KP    YN LL+  +K   ++   ++  +M   G+ P  +T++LLI A  ++   ++AR 
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
           +  EM     KPN F +  ++ GY   G   +  ++L  M+S GV P+   YN ++ +F 
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF---- 507
           +      +    ++M  EG+ PD +T+N+ I    K G+   A  +F +M+   Y     
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
           P + TYN+M+    +    ED K L  ++R    L ++ +Y   +    + G+F +A   
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
           L+ ++D+           G+ PS  + N L++   +    ++A  ++  MK NG+ PD V
Sbjct: 349 LKQMTDK-----------GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAV 397

Query: 628 TYTTLMKALIRVDK 641
           TY  L+     V K
Sbjct: 398 TYGCLLHGYCSVGK 411



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 197/484 (40%), Gaps = 58/484 (11%)

Query: 166 YSILIHALGRSEKLYEA-FLLSQR--QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+I +  L R  K  EA  +L Q   + + P   +YN L+    +   L  A  ++  M+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
           ++G   D + Y  ++       K+D+  SLLQ++ +    +    +    N ++    K 
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR----NNCLPNAYTCNILLHSLWKM 444

Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK----------- 327
           G  S+A   L      G    T T   ++  L  SG   +A  + + ++           
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504

Query: 328 ------------ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
                       E+   P    Y+ LL G  K G   +A+ + +EM    + PD   Y++
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
            I  +   G+  SA  VLK+ME      +   Y+ ++ G   + +      ++ EMK  G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           + P+   YN  I    +   +  A    D M+ + I P+  ++  LI+   K   +D A+
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684

Query: 496 ELFEEM-----QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
           E+FE       Q+ G       Y++M N L    +      LL  +  +G       Y  
Sbjct: 685 EVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738

Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE--DQRDA 608
           LV+   +     D +E   G+  + ++     R  G  P+  AL  +I+  G+  ++++A
Sbjct: 739 LVESLCKK----DELEVASGILHKMID-----RGYGFDPA--ALMPVIDGLGKMGNKKEA 787

Query: 609 EAFA 612
            +FA
Sbjct: 788 NSFA 791



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/404 (20%), Positives = 158/404 (39%), Gaps = 66/404 (16%)

Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
           A  +  LL   CS    +D A +++  + ++N C       +IL+H+L +  ++ EA  L
Sbjct: 396 AVTYGCLLHGYCSV-GKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEAEEL 453

Query: 186 SQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGY---------------- 224
            ++       L  +T N ++     + +L+KA+ ++  MR  G                 
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 225 -----HC--DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
                +C  D I YS ++  L +  +   +  + L+ E+  +K++ D    N  I  F K
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEA--KNLFAEMMGEKLQPDSVAYNIFIHHFCK 571

Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
            G  S A R L   +  G      TY ++I  L    +  E   + +E+KE G+ P    
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICT 631

Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPD---------------------------- 369
           YN  ++   +   ++DA  ++ EM +  + P+                            
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691

Query: 370 ------EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
                 E  YSL+ +    AG+   A  +L+ +     +  +F+Y  ++     + E + 
Sbjct: 692 SICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
              +L +M   G   D      +ID  GK      A +  D+M+
Sbjct: 752 ASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 238/527 (45%), Gaps = 36/527 (6%)

Query: 74  VLSLQKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLA--ESYRAVPAPLWHS 131
           +L   K+ Y    L+ FL  N         A     L  + FKL     +        +S
Sbjct: 135 ILVYGKRNYRVMDLILFLVRNIGG------AVGEEELCDLLFKLVYDTGFGTKDLETVYS 188

Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRL 191
           +L +   + S + LA  ++  ++  N+  S  +  S+L  AL RS +L  A+ + +  + 
Sbjct: 189 MLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLL-KALLRSHQLDLAWDILEGMQS 247

Query: 192 TPLTYNALI------SACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN--K 243
             +  NA I      S CA  + ++    ++ +M+  G   D I Y++VI +L + +  K
Sbjct: 248 FGMHLNASILSLFIESYCAEGN-IQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVK 306

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           + +SLL   +K I C         ++ VI G+ K G + KA+  L       + P    Y
Sbjct: 307 VATSLL---FKMIHCGISVDS-VSVSSVIDGYCKKGRSDKAINLLNF---FNVRPNIFVY 359

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
           ++ +T L   G  +EA   F+E+ E GL P    Y  ++ GY K+G +  A   + EM +
Sbjct: 360 SSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK 419

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            G+ P   TY+LLI+A   +G    A  +L+ M +    P+   ++ ++ G+  +G  Q+
Sbjct: 420 FGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQK 479

Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
            F++L  M+S+G+ PDT  YN +I +       + A      ++  G+ PD +T+  +ID
Sbjct: 480 AFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVID 539

Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
              K G ++ A  ++  M ER   P   T + ++N      R ++   L   M   GL P
Sbjct: 540 GFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKP 599

Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
           ++V Y  L+  +           C  G  + A N   +M  DG  P+
Sbjct: 600 DLVLYNNLIHGF-----------CSAGNMNAACNLVAMMIDDGFLPN 635



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 16/442 (3%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            Y+ L+        +  ALNL+ +++           + ++++L R++++D  L   + +
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLD--LAWDILE 243

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
            ++   + L+  +L+  I  +   G+     + L   +  G+      Y  VI AL    
Sbjct: 244 GMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKIS 303

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
               A ++  ++   G+   + + ++++ GY K G    A   ++ +    V P+   YS
Sbjct: 304 CVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKA---INLLNFFNVRPNIFVYS 360

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
             +      G    A    +EM      P+ F Y+ I+ GY   G+  + FQ L EM   
Sbjct: 361 SFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKF 420

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G+ P    Y ++I+   K   +  A     RM+ EG+ PD +T+N LID   K G   +A
Sbjct: 421 GITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKA 480

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
            EL + M+  G  P T TYN +I+ L  +    + K +L  +  +GL P+V+T+T ++D 
Sbjct: 481 FELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDG 540

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           + + G F++A      +S++ V           KP  +  ++L+N +   +R  EA A+ 
Sbjct: 541 FSKKGNFEEAFLVWSYMSERHV-----------KPDVVTCSALLNGYCRARRMDEANALF 589

Query: 615 QYMKENGLKPDVVTYTTLMKAL 636
             M + GLKPD+V Y  L+   
Sbjct: 590 LKMLDAGLKPDLVLYNNLIHGF 611



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 141/284 (49%), Gaps = 5/284 (1%)

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           +I G+ K GD +KA ++LG     G++P   TY  +I A   SG    AE + + +   G
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEG 456

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
           L P    +N L+ G+ K GYL+ A  ++  M  +G+ PD  TY+ LI +    G    A+
Sbjct: 457 LIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAK 516

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
            +L E+      P+   ++ ++ G+  +G ++  F V   M    V+PD    + +++ +
Sbjct: 517 DILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGY 576

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
            +   +  A A F +ML  G++PD + +N LI      G  + A  L   M + G+ P  
Sbjct: 577 CRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNI 636

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           TT+      LG +++W     L  +++ + +L   +T++T +D+
Sbjct: 637 TTHRAFA--LGFEKKWVKNPELHASLKLKQIL---LTHSTCLDV 675



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 176/420 (41%), Gaps = 16/420 (3%)

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           YS+++      +K+  SL   L  EI+   I     + N ++    ++     A   L  
Sbjct: 187 YSMLVDCYVTESKV--SLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEG 244

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            Q  G+    +  +  I +    G       +  E+K  G+K    AY  ++    K+  
Sbjct: 245 MQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISC 304

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           +K A  ++ +M   G+  D  + S +ID Y   GR + A  +L    V   +PN F+YS 
Sbjct: 305 VKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNV---RPNIFVYSS 361

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
            +      G      +  +EM   G+ PD   Y ++I  + K   ++ A      ML  G
Sbjct: 362 FMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFG 421

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I P   T+  LI+   K G    AE L + M   G  P   T+N +I+  G++   +   
Sbjct: 422 ITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAF 481

Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
            LL  MR+ G+ P+ VTY  L  I+    R         G  ++A +    +   GL P 
Sbjct: 482 ELLDIMRSAGMSPDTVTYNAL--IHSLIAR---------GYPNEAKDILHELIRRGLSPD 530

Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            +    +I+ F +     EAF V  YM E  +KPDVVT + L+    R  +  +  + +L
Sbjct: 531 VMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFL 590



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 47/342 (13%)

Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
           G K     Y+ L+  YV    +  A  ++ E++   + P     + L+ A   + + + A
Sbjct: 179 GTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLA 238

Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
             +L+ M+      N+ I S  +  Y   G  Q  +++L EMK+ G++ D   Y ++ID 
Sbjct: 239 WDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDA 298

Query: 450 FGKYNCLHHAMAAFDRMLSEG--------------------------------IEPDTIT 477
             K +C+  A +   +M+  G                                + P+   
Sbjct: 299 LCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFV 358

Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
           +++ +    K G    A + F+EM E G +P    Y I+I    +        + LG M 
Sbjct: 359 YSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEML 418

Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT--DGLKPSNLALN 595
             G+ P+V TYT L++   +SG             D A+  + + R   +GL P  +  N
Sbjct: 419 KFGITPSVTTYTLLINACCKSG-------------DMAMAEYLLQRMMLEGLIPDVVTFN 465

Query: 596 SLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
            LI+ FG+     +AF +L  M+  G+ PD VTY  L+ +LI
Sbjct: 466 CLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLI 507


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 218/521 (41%), Gaps = 50/521 (9%)

Query: 163  ELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMS 217
            E+ Y  L++ L + EK   A  L +R R+  +      Y  LI    +N  L++A+ L+ 
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVG 1218

Query: 218  KMRQDGYHCDFINYSLVIQSLTRT--------------------NKIDSSLL-------- 249
             M +DG + D I YS +I    R                     NKI  S L        
Sbjct: 1219 NMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHG 1278

Query: 250  -----QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304
                  K+Y  + C+    D    N ++    + G   +A +FL     +GL P + TY 
Sbjct: 1279 NVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYD 1338

Query: 305  AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
             +I    + G  + A + F+++ + G  P    Y +LLKG  K G L +A+  ++ +   
Sbjct: 1339 CIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYI 1398

Query: 365  GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
                D   Y+ L+     +G    A  +  +M  ++  P+S+ YS +L G   +G+    
Sbjct: 1399 PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTA 1458

Query: 425  FQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
              +       G + P+   Y  ++D   K      A   F+ M+ +G  PDT+ +N +ID
Sbjct: 1459 VCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIID 1518

Query: 484  CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
               + G+  +A + F  M+  G  P   TYNI+++   +++       L   M  +G+ P
Sbjct: 1519 SCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFP 1578

Query: 544  NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
            + +T+ +L+    +SG           + D  V     M  +G        N LIN + E
Sbjct: 1579 DKLTFHSLILGLSKSG-----------IPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627

Query: 604  DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              +  +AF ++ +M   G+ PD  TY  +   L +   F +
Sbjct: 1628 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRE 1668



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 220/493 (44%), Gaps = 28/493 (5%)

Query: 175  RSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
            R+E ++  F     + + P   T+N LI+      +L+KA NL+ +M ++G+    + Y+
Sbjct: 964  RTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYN 1023

Query: 233  LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
             ++    +  +  +++  +L   + C  IE D    N  I        ++KA   L   +
Sbjct: 1024 TLLNWYCKKGRYKAAI--ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 293  GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
               +SP   TY  +I      G+   A  VF E+ +  L P    YNAL+ G+  +G  +
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 353  DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
            +A  ++  ME +G+  +E TY  L++      ++E A+ +L+ M V+        Y+ ++
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 413  AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
             G    G      Q++  M   GV PD   Y+ +I+ F +   +  A     RM   G+ 
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 473  PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
             + I ++TLI    + G    A +++  M   G+     T N++++ L    +  + ++ 
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 533  LGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIEC------------LEGLSD 573
            L +M   GL+PN +TY  +++ YG  G        FDD I+C            L+GL  
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 574  QA--VNAFRVMRTDGLKPS---NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
                V A + +      P    ++  N+L+    +     EA A+   M +N + PD  T
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 629  YTTLMKALIRVDK 641
            Y++L+  L R  K
Sbjct: 1442 YSSLLTGLCRKGK 1454



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 210/477 (44%), Gaps = 19/477 (3%)

Query: 166  YSILIHALGRSEKLYEAFLLSQRQRLTP-----LTYNALISACARNDDLEKALNLMSKMR 220
            Y  L+  L +   L EA     R    P     + YN L++   ++ +L +A+ L  KM 
Sbjct: 1372 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV-GFAKAG 279
            Q+    D   YS ++  L R  K  +++   L+             ++   +V G +KAG
Sbjct: 1432 QNNVLPDSYTYSSLLTGLCRKGKAVTAVC--LFGTAMGRGTLFPNHVMYTCLVDGLSKAG 1489

Query: 280  DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
                A  F       G  P T  + A+I + S  G+ ++A   F  ++  G+ P    YN
Sbjct: 1490 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 1549

Query: 340  ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
             LL G+ K   L     + S M R G+ PD+ T+  LI   + +G  +    +L +M + 
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609

Query: 400  HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
                + F ++ ++  Y + G+ ++ F ++  M + GV PD   YN + +   K +    +
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669

Query: 460  MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
                  ML  G+ P    + TLI+   + G    A +L +EM+  G+       + M+  
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 1729

Query: 520  LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            L    + ED   +L +M    LLP + T+TTL+  + +  +  +A++ L+G         
Sbjct: 1730 LLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKG--------- 1779

Query: 580  RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
             VM   GLK   +A N LI     +   A AF + + M+   L P++ TY  L+ A+
Sbjct: 1780 -VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 202/478 (42%), Gaps = 19/478 (3%)

Query: 167  SILIHALGRSEKLYEA--FLLSQ-RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
            ++L+ +L R  KL EA  FL    R  L P  +TY+ +I+      D   A +    M +
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 1362

Query: 222  DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
             G H  F  Y  +++ L +   +  +  +K    +      +D  + N ++    K+G+ 
Sbjct: 1363 CGQHPSFFTYGSLLKGLCKGGNLVEA--KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420

Query: 282  SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTKAYNA 340
             +A+          + P + TY++++T L   G+ + A  +F      G L P    Y  
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            L+ G  K G+ K A +   EM + G  PD   ++ +ID+ +  G+   A      M    
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              PN   Y+ +L G+  +    R   +   M   G+ PD   ++ +I    K       +
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600

Query: 461  AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
                +M+ EG   D  T+N LI+ + + G+  +A +L   M   G FP   TYN + N L
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGL 1660

Query: 521  GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
             ++  + +   +L  M   G++P    Y TL++   + G    A +    L D+      
Sbjct: 1661 NKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFK----LKDE------ 1710

Query: 581  VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             M   G     +A ++++       +  +A  VL +M    L P + T+TTLM    R
Sbjct: 1711 -MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCR 1767



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 185/443 (41%), Gaps = 13/443 (2%)

Query: 193  PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKL 252
            P  ++ LI    +   ++ A+     +   G+       ++++ S+ +  +  + L+  L
Sbjct: 914  PSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKR--TELVWSL 971

Query: 253  YKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
            ++E+    I  +    N +I G    G+  KA   L   +  G  P   TY  ++     
Sbjct: 972  FREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCK 1031

Query: 313  SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
             GR   A  + + +   G++     YN  +           A  ++ +M +  + P+E T
Sbjct: 1032 KGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVT 1091

Query: 373  YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
            Y+ LI+ +   G+   A  V  EM      PN   Y+ ++ G+   G+++   ++L  M+
Sbjct: 1092 YNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 1151

Query: 433  SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
            ++G+  +   Y  +++   K+     A    +RM    +    I +  LID   K G  D
Sbjct: 1152 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLD 1211

Query: 493  RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
             A +L   M + G  P   TY+ +IN        +  K ++  M   GL+ N + Y+TL+
Sbjct: 1212 EAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 1271

Query: 553  DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
              + Q G   +A++            + VM  +G    +   N L+++   D +  EA  
Sbjct: 1272 YNFCQHGNVTEAMK-----------VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320

Query: 613  VLQYMKENGLKPDVVTYTTLMKA 635
             L +M   GL P+ +TY  ++  
Sbjct: 1321 FLCHMSRIGLVPNSITYDCIING 1343



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 180/419 (42%), Gaps = 8/419 (1%)

Query: 129  WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQ- 187
            + SLL  LC    ++       + + +  L +   ++Y+ L+  L ++     AF   + 
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTL-FPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500

Query: 188  --RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
              ++   P  + +NA+I +C+R   + KA +  S MR  G   +   Y++++   ++   
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560

Query: 244  IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
            +   L   LY  +  + I  D    + +I+G +K+G     ++ LG     G      T+
Sbjct: 1561 LLRYL--SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTF 1618

Query: 304  AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
              +I   S SG+  +A  +   +   G+ P    YN +  G  K    +++  V+ EM  
Sbjct: 1619 NILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE 1678

Query: 364  SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
            +GV+P    Y  LI+     G  + A  +  EME      +    S ++ G    G+ + 
Sbjct: 1679 NGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTED 1738

Query: 424  TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
               VL  M    + P    +  ++  F +   +  A+     M   G++ D + +N LI 
Sbjct: 1739 AMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIM 1798

Query: 484  CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
                 G    A EL+EEM+ R   P  TTY ++++ +         ++LL +++ +GL+
Sbjct: 1799 GMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 11/271 (4%)

Query: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
             + LLI  Y   G  + A    + + +   KP+ +  + ILA        +  + + +EM
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
               G+ P+   +N++I+       L  A     +M   G  P  +T+NTL++ + K GRY
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 492  DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
              A EL + M  +G      TYN+ I+ L    R      LL  MR + + PN VTY TL
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 552  VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
            ++ + + G+         G++ Q  N    M    L P+ +  N+LI          EA 
Sbjct: 1096 INGFVKEGKI--------GVAAQVFNE---MSKFDLSPNCVTYNALIGGHCHVGDFEEAL 1144

Query: 612  AVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
             +L +M+  GL+ + VTY TL+  L + +KF
Sbjct: 1145 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 1175



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 138/318 (43%), Gaps = 11/318 (3%)

Query: 166  YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
            Y+IL+H   + + L     L     R+ + P  LT+++LI   +++   +  + L+ KM 
Sbjct: 1548 YNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI 1607

Query: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             +G   D   ++++I   + + K+  +    L   +    +  D    N +  G  K   
Sbjct: 1608 MEGTLADQFTFNILINKYSESGKMRKAF--DLVNFMNTLGVFPDRDTYNHIFNGLNKKSA 1665

Query: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
              ++   L      G+ PK A Y  +I  +   G    A  + +E++  G      A +A
Sbjct: 1666 FRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESA 1725

Query: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
            +++G +  G  +DA  V+  M R  +LP   T++ L+  +    +   A  +   ME+  
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785

Query: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             K +   Y+ ++ G    G+    F++ +EM+   + P+   Y V++D     N L    
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG- 1844

Query: 461  AAFDRMLSEGIEPDTITW 478
               +++L++  E   I+W
Sbjct: 1845 ---EKLLTDLQERGLISW 1859


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/564 (23%), Positives = 238/564 (42%), Gaps = 71/564 (12%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LL 185
           ++ +++   C +   +D A+ ++  +++  +     LL+S LI  L R  ++ EA     
Sbjct: 1   MYTTVINGFCKAGQ-VDQAFELLDEMKERGVKMDV-LLHSTLIQGLCRKGRIDEALEQFK 58

Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ-----DGYHCDFINYSLVIQSL 238
           S  +  +P  +TYN +++   + + +++ L L   M +      G   D I+YS VI +L
Sbjct: 59  SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118

Query: 239 TRTNKID---------------------SSLLQKLYKEIECDK-----IELDGQLL---- 268
            +  ++D                     SSL+  L K    D+     ++L G+ +    
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178

Query: 269 ---NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE 325
              N V+ GF + G  S+ +  L   +  G       + A++ AL  +    +A   FE 
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238

Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
           L +SG KP    YN  + G  K G + +A  ++ EM  S V PD  TYS +ID +  AGR
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298

Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
            + A  V   M V    P+   +  +L G+ +  + +  F+V ++M ++G  P    YNV
Sbjct: 299 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 358

Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
           ++D     + +  A+  + +M  +  +PD  T+  LI C  +  R D A+E  + M+   
Sbjct: 359 LMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADN 418

Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
             P     + ++ +L +Q   ++         A  +L NVV                   
Sbjct: 419 VVPNGAICHALVEVLCKQGEVDE---------ACSVLDNVVEI----------------- 452

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
            C  G  D+AV     M   G++P      +++ +     R   A A  + M   G  P 
Sbjct: 453 -CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPG 511

Query: 626 VVTYTTLMKALIRVDKFHKVFSSY 649
           +VTYT L+      D     F  +
Sbjct: 512 LVTYTLLIGEACSADMADDAFRIF 535



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 189/442 (42%), Gaps = 31/442 (7%)

Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF--LLS 186
           + SL+  LC  +  +D AY+++  L+  ++     + Y+ +++   R  K  E    LL 
Sbjct: 146 YSSLIDGLCKVDR-VDEAYSLLMQLKGEDM-VPRAMYYNAVVNGFKRQGKPSECLELLLH 203

Query: 187 QRQR---LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
            +++   +  + +NA++ A  +ND+ EKA     ++ + G   + + Y++ +  L +  K
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263

Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
           +D +   ++  E+   K+  D    + +I GF KAG   KA             P   T+
Sbjct: 264 VDEAY--RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 321

Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
             ++   S   ++ EA  V E++  +G  P  + YN L+        ++ A  +  +M+R
Sbjct: 322 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 381

Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
               PD +TY+ LI     A R + A+  L  ME  +  PN  I   ++     +GE   
Sbjct: 382 KKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 441

Query: 424 TFQVLK---EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
              VL    E+  +G EPD                   A+   ++M+ +G+ PD  T+  
Sbjct: 442 ACSVLDNVVEICKAG-EPD------------------EAVEVIEQMVLKGVRPDEATYVA 482

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           ++       R D A   FE+M  RG  P   TY ++I      +  +D  R+   M A G
Sbjct: 483 VLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAG 542

Query: 541 LLPNVVTYTTLVDIYGQSGRFD 562
             P   T  TL      +G  D
Sbjct: 543 FTPQAQTMRTLSSCLRDAGYQD 564



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 117/297 (39%), Gaps = 28/297 (9%)

Query: 112 RVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
           R+  ++ ES        + S++   C +   +D A  V + +  H  C  + + +  L+H
Sbjct: 269 RILLEMVESKVTPDVITYSSIIDGFCKAGR-MDKADDVFTRMMVHE-CIPHPVTFMTLLH 326

Query: 172 ALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
                +K  EAF + +        P   TYN L+      D +E AL +  KM++     
Sbjct: 327 GFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQP 386

Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN----------------- 269
           D   Y+ +IQ L R  ++D +  ++    +E D +  +G + +                 
Sbjct: 387 DANTYAPLIQCLCRARRVDEA--KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 444

Query: 270 --DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
             D +V   KAG+  +A+  +      G+ P  ATY AV+ +L    R   A A FE++ 
Sbjct: 445 VLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMA 504

Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
             G  P    Y  L+          DA  +   M  +G  P   T   L     +AG
Sbjct: 505 SRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561


>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 186/395 (47%), Gaps = 20/395 (5%)

Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           D    N +I  + K+    +A +   + +     P   ++  ++ A S   +  +AE +F
Sbjct: 82  DVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLF 141

Query: 324 EELKESGLKPRT---------KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
            E+KES   P T           YN  L+   K G L  AE    +M++ G+LP  +T++
Sbjct: 142 HEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFT 201

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           ++I+ Y  A   + A  + + M  +   PN + Y+ ++  +   G   R  ++  E++S 
Sbjct: 202 IMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSV 261

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           G  PD + YN +++ + +      A   F  M+  G+ PD +++N LID   + G    A
Sbjct: 262 GFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADA 321

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
           + +++ M+E G+ P   ++ ++++   +  +  + +RL+  +   G+ P+   + +L+  
Sbjct: 322 QAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSA 381

Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
           YG SGR D+    LE +                KP    LN+LINA+ +     +A  V 
Sbjct: 382 YGNSGRIDEMESLLESMVSSVA-----------KPDISTLNTLINAYAQGGYIEKAEEVF 430

Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
             ++  GL PDV+++T+LM A  +   F K  S +
Sbjct: 431 NSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIF 465



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 200/413 (48%), Gaps = 16/413 (3%)

Query: 149 VVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA----FLLSQRQRL-TPLTYNALISAC 203
           ++ W+ +  +       +++LI A G+S++  EA     L+   Q L T  ++N L++A 
Sbjct: 69  ILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAY 128

Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFI---------NYSLVIQSLTRTNKIDSSLLQKLYK 254
           +R   LEKA  L  +M++  Y    +          Y+  ++ L ++ ++  +  +  ++
Sbjct: 129 SRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQA--EDTFR 186

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           +++   I         +I  + KA  + KA       +     P   TY A++ A +  G
Sbjct: 187 DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREG 246

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
             + AE +F EL+  G  P    YNALL+ Y +  +   A+ V   M  +GV PD+ +Y+
Sbjct: 247 NCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYN 306

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
           +LIDA+  AG    A+ V   M+ +  KP    +  +L+ Y   G+     ++++E+++S
Sbjct: 307 ILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366

Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
           GV+PDT  +N ++  +G    +    +  + M+S   +PD  T NTLI+ + + G  ++A
Sbjct: 367 GVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKA 426

Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           EE+F  ++ +G  P   ++  ++    +++ +     +   M   G +P+  T
Sbjct: 427 EEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRAT 479



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 68/235 (28%)

Query: 472 EPDTITWNTLIDCHFKCGRY-----------------------------------DRAEE 496
           +PD   +N LID + K  ++                                   ++AE+
Sbjct: 80  KPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEK 139

Query: 497 LFEEMQERGYFPCTT---------TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
           LF EM+E  Y P T          TYN  + +LG+  R    +    +M+ QG+LP V T
Sbjct: 140 LFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNT 199

Query: 548 YTTLVDIYGQ---SGRFDDAIECL---------------------EGLSDQAVNAFRVMR 583
           +T +++IYG+   S + DD    +                     EG   +A   F  ++
Sbjct: 200 FTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQ 259

Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
           + G  P     N+L+ A+   +    A  V Q M E G++PD V+Y  L+ A  R
Sbjct: 260 SVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGR 314


>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera]
 gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 204/419 (48%), Gaps = 20/419 (4%)

Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
           ++A  + + + ++G+    I Y+ ++ +LTR  +  S  +  L  ++E + ++ D    N
Sbjct: 88  QEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKS--IPSLISKLEKNGLKPDSVFFN 145

Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KE 328
            +I  F+++G+  +AM+     +  G  P T+T+  +I    N+G   E   + + + +E
Sbjct: 146 AMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQE 205

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
             +KP  + +N+L++ +     + +A  VV +M  SG+ PD  TY+ L  AYA  G    
Sbjct: 206 ENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSR 265

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  ++ EM+ +   PN      I+ GY   G+ +   + L  M++ GV P+   +N +I 
Sbjct: 266 AEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIK 325

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
            F           A   M   G++PD +T++T+++     G  D+ +E+F++M + G  P
Sbjct: 326 GFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEP 385

Query: 509 CTTTYNIMIN---LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
               ++I+       GE E+ E    LL  M   G+ PNVV +TT++  +  +G+ + A 
Sbjct: 386 DIHAFSILAKGYVRAGEPEKAES---LLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYAS 442

Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
              E + +            G+ P+     +LI  +GE +   +A  +LQ M++ G+ P
Sbjct: 443 RVYEKMCEM-----------GICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAP 490



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 199/415 (47%), Gaps = 6/415 (1%)

Query: 165 LYSILIHALGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQD 222
           L +ILI   G+ ++    F  L  +  R T +TY  L++A  R    +   +L+SK+ ++
Sbjct: 77  LMNILIEK-GKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKN 135

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDAS 282
           G   D + ++ +I + + +  +  ++  K++++++    +      N +I G+  AG   
Sbjct: 136 GLKPDSVFFNAMINAFSESGNVKEAM--KIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPE 193

Query: 283 KAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
           + ++ L  M+Q   + P   T+ ++I A  N  R  EA  V  ++  SGL+P    YN L
Sbjct: 194 ECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTL 253

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
            + Y + G    AE ++ EM+ + V+P+E T  ++I+ Y   G+ + A   L  M     
Sbjct: 254 ARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGV 313

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
            PN  I++ ++ G+ D  +     + L  M+  GV+PD   ++ +++ +     +     
Sbjct: 314 HPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQE 373

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
            FD M+  GIEPD   ++ L   + + G  ++AE L   M + G  P    +  +I+   
Sbjct: 374 IFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWC 433

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
              + E   R+   M   G+ PN+ T+ TL+  YG++     A E L+ +  + V
Sbjct: 434 SAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGV 488



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 178/378 (47%), Gaps = 29/378 (7%)

Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
           ++  L   G+  EA+ +F  L E G +P    Y  LL    +    K    ++S++E++G
Sbjct: 77  LMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNG 136

Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
           + PD   ++ +I+A++ +G  + A  + ++M+    KP +  ++ ++ GY + G  +   
Sbjct: 137 LKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECL 196

Query: 426 QVLKEM-KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
           ++L  M +   V+P+   +N +I  +     +  A     +M + G++PD +T+NTL   
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARA 256

Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPN 544
           + + G   RAE +  EMQ     P   T  I+IN   ++ + +D  R L  MR  G+ PN
Sbjct: 257 YAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPN 316

Query: 545 VVTYTTLV----DIYGQSGRFDDAIECLE---------------------GLSDQAVNAF 579
           +V + +L+    DI    G  D+A+  +E                     GL D+    F
Sbjct: 317 LVIFNSLIKGFLDITDTDG-VDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIF 375

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
             M   G++P   A + L   +       +A ++L  M ++G++P+VV +TT++      
Sbjct: 376 DDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSA 435

Query: 640 DKFHKVFSSYLFFNIYKM 657
            K    ++S ++  + +M
Sbjct: 436 GKME--YASRVYEKMCEM 451



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 161/355 (45%), Gaps = 8/355 (2%)

Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAF----LLSQRQRLTP--LTYNALISACARNDD 208
           K   C      ++ LI   G +    E      L+SQ + + P   T+N+LI A      
Sbjct: 168 KDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKR 227

Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
           + +A N++ KM   G   D + Y+ + ++  +    ++S  + +  E++ +++  + +  
Sbjct: 228 ITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNG--ETSRAEGMILEMQNNRVMPNERTC 285

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
             +I G+ K G    A+RFL   +  G+ P    + ++I    +   T   +     ++E
Sbjct: 286 GIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEE 345

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            G+KP    ++ ++  +  +G +   + +  +M ++G+ PD H +S+L   Y  AG  E 
Sbjct: 346 FGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEK 405

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
           A  +L  M  S  +PN  I++ I++G+   G+ +   +V ++M   G+ P+   +  +I 
Sbjct: 406 AESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIW 465

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
            +G+      A      M  +G+ P   T   + D     G  + A+ +  +++E
Sbjct: 466 GYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKNDVEE 520



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V   T   N++I+  GK      A   F+ +  EG  P  IT+ TL+    +  R+    
Sbjct: 71  VRSRTKLMNILIEK-GKP---QEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIP 126

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
            L  ++++ G  P +  +N MIN   E    ++  ++   M+ +G  P   T+ TL+  Y
Sbjct: 127 SLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGY 186

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
           G +G  ++ ++ L+ +S +          + +KP++   NSLI A+   +R  EA+ V+ 
Sbjct: 187 GNAGMPEECLKLLDLMSQE----------ENVKPNDRTFNSLIRAWCNKKRITEAWNVVY 236

Query: 616 YMKENGLKPDVVTYTTLMKA 635
            M  +GL+PDVVTY TL +A
Sbjct: 237 KMAASGLQPDVVTYNTLARA 256


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 217/502 (43%), Gaps = 24/502 (4%)

Query: 148 AVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--FLLSQRQRLTPL---TYNALISA 202
           A  +++ + +L  ++E++   ++ A G + +L EA   +L  R    PL   T N ++  
Sbjct: 97  AATAFVARGSLPMAHEVMRG-MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRV 155

Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLYKEIECDK 260
                    A  +   M + G   D  ++  ++    R  K++   +LL  +++      
Sbjct: 156 GLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRY----G 211

Query: 261 IELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAE 320
             LD      V+    + G       F       G  P    Y A I  L       +A 
Sbjct: 212 FSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAF 271

Query: 321 AVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDA 379
            V EE+   GLKP    +  L+ G  K+G+ + A    +  ++ S   P+ HTY+++I  
Sbjct: 272 HVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 331

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           Y   G+   A ++L  M     KPN+  Y+ ++ G+   G + R F+++ +MK  G  P+
Sbjct: 332 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 391

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
            + YN +ID F K   +  A        S+G++ D IT+  LI  H K G    A +LF+
Sbjct: 392 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 451

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
            M E G  P    Y  +I+   +Q + E+ ++        GLLP   TYT+++  Y + G
Sbjct: 452 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 511

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
           R           S  A+  F  M  +G    ++   +LI+   ++ R  EA A+ + M +
Sbjct: 512 R-----------STLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLD 560

Query: 620 NGLKPDVVTYTTLMKALIRVDK 641
             L P  VT  TL     R +K
Sbjct: 561 KRLVPCEVTRVTLTFEYCRREK 582



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 123/516 (23%), Positives = 219/516 (42%), Gaps = 44/516 (8%)

Query: 103 LASSPS--SLNRVEFKLAESYRAVPA-PLWHSLLKNLCSS---NSSIDLAYAVVSWLQKH 156
           LAS P    L R+    A ++ A  + P+ H +++ + ++      +  A  +V  ++ H
Sbjct: 81  LASRPDLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSH 140

Query: 157 NLCYSYELLYSILIHALGRSEKLY--EAFLLSQRQRLTP--LTYNALISACARNDDLEKA 212
            L    E    +L   L     +Y  + F    R  + P   ++ AL+  C R   +E+ 
Sbjct: 141 GLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEV 200

Query: 213 LNLMSKMRQDGYHCDFINYSLVIQSLTRTNK--------------------------IDS 246
             L++ M + G+  D    ++V++SL    +                          ID 
Sbjct: 201 DALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDG 260

Query: 247 SLLQKLYKEIECDKIELDGQLL-------NDVIVGFAKAGDASKAMR-FLGMAQGVGLSP 298
              ++  K+      E+ G+ L         +I G  K G   +A R FL + +     P
Sbjct: 261 LCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKP 320

Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
              TY  +I      G+   AE +   + E GLKP T  Y  L+ G+ K G    A  ++
Sbjct: 321 NVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 380

Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
           ++M++ G LP+ +TY+ +ID +   G+ + A  VL+       K +   Y+ ++  +  +
Sbjct: 381 NKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQ 440

Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITW 478
           G       +   M  +G  PD   Y  +I T+ +   +  +   FD+ L  G+ P   T+
Sbjct: 441 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTY 500

Query: 479 NTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRA 538
            ++I  + K GR   A  +FE M + G F  + TY  +I+ L ++ R E+ K L   M  
Sbjct: 501 TSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLD 560

Query: 539 QGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
           + L+P  VT  TL   Y +  +   A+  L+ L  +
Sbjct: 561 KRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 596



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/446 (23%), Positives = 194/446 (43%), Gaps = 64/446 (14%)

Query: 266 QLLNDVIVGFAKAGDASKA--MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
           +++  ++  F +AG   +A  M     + G+ L  +TA +  V+     +G  + A  VF
Sbjct: 112 EVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANW--VLRVGLETGSFVYARKVF 169

Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
           + +  +G+ P  +++ AL+    + G +++ + +++ M R G   D  T ++++ +    
Sbjct: 170 DGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEK 229

Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM------------ 431
           GR++      + M  +   PN   Y+  + G   R   ++ F VL+EM            
Sbjct: 230 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 289

Query: 432 ------------------------KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
                                   KSS  +P+ H Y VMI  + +   L  A     RM+
Sbjct: 290 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV 349

Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
            +G++P+T T+ TLI  H K G +DRA EL  +M++ G+ P   TYN +I+   ++ + +
Sbjct: 350 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ 409

Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGR-------FDDAIE-------------- 566
           +  ++L    +QGL  + +TYT L+  + + G        FD  +E              
Sbjct: 410 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 469

Query: 567 ---CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
              C +   +++   F      GL P+     S+I  + +  R   A  V + M +NG  
Sbjct: 470 STYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 529

Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSY 649
            D +TY  L+  L +  +  +  + Y
Sbjct: 530 ADSITYGALISGLCKESRLEEAKALY 555



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 135/344 (39%), Gaps = 10/344 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTPLT--YNALISACARNDDLEKALNLMSKMR 220
           Y+++I    R  KL  A +L  R   Q L P T  Y  LI    +    ++A  LM+KM+
Sbjct: 325 YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK 384

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q+G+  +   Y+ VI    +  KI  +   K+ +      ++ D      +I    K G 
Sbjct: 385 QEGFLPNIYTYNAVIDGFCKKGKIQEAY--KVLRMATSQGLKFDKITYTILITEHCKQGH 442

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            + A+         G  P    Y ++I+      +  E++  F++    GL P  + Y +
Sbjct: 443 ITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTS 502

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++ GY K+G    A  V   M ++G   D  TY  LI       R E A+ + + M    
Sbjct: 503 MIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKR 562

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
             P       +   Y  R +      VL  +         H  +V++        +  A 
Sbjct: 563 LVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDK---RQQVHTVDVVVRKLSALGDVDAAS 619

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
               ++L E    D  T+   I+  ++  RY  A E+ E+  ++
Sbjct: 620 LFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKK 663


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 188/392 (47%), Gaps = 7/392 (1%)

Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRLTPLTYNALISA-CARNDDLEKALNLMSKMRQ-D 222
           ++I++  L  + K   A  LL Q      +TYN +I+  CAR   ++  + +M +MR+  
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGR-VQAGIEIMREMRERG 177

Query: 223 GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD-KIELDGQLLNDVIVGFAKAGDA 281
           G   D   Y+ VI    +  K++ +   K++ E+  + K+E +  + N +I G+   G+ 
Sbjct: 178 GIAPDKYTYATVISGWCKVGKVEDA--TKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235

Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
             A+R+ G     G+S   ATY   +  L   GR  EA A+ EE+ E GL P    YN L
Sbjct: 236 EVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNIL 295

Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
           + GY K G  K A  +   M   G+     TY+ LI A +  G  +    +  +      
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355

Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
           +P+ F+Y+ ++  +   G+  R F+++ EM+   + PD   YN ++        L  A  
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARG 415

Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
             + M   GI+PD +++NTLI  +   G    A ++ +EM  +G+ P   TYN MI  L 
Sbjct: 416 LIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLC 475

Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
              +  D + L+  M   G+ P+  TY +L++
Sbjct: 476 LNGQGGDAEDLVKEMVGNGITPDDSTYISLIE 507



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 13/375 (3%)

Query: 269 NDVIVGFAKAGDASKAMRFLG-MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEE-L 326
           N VI GF   G     +  +  M +  G++P   TYA VI+     G+  +A  VF+E L
Sbjct: 151 NTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEML 210

Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
            E  ++P    YNAL+ GY   G L+ A     EM   GV     TY+L +      GR 
Sbjct: 211 TEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRA 270

Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
             A  +++EM      P++F Y+ ++ GY   G+ ++  ++ + M   G+      Y  +
Sbjct: 271 AEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSL 330

Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
           I        +      F+  +  GI PD   +N LI+ H   G  DRA E+  EM+++  
Sbjct: 331 IHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRI 390

Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
            P   TYN ++  L    R ++ + L+  M  +G+ P++V+Y TL+  Y   G   DA++
Sbjct: 391 TPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVK 450

Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
               + D+       M   G  P+ L  N++I     + +  +A  +++ M  NG+ PD 
Sbjct: 451 ----VRDE-------MMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDD 499

Query: 627 VTYTTLMKALIRVDK 641
            TY +L++ L   D+
Sbjct: 500 STYISLIEGLTTEDE 514



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 7/254 (2%)

Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y++ +H L    +  EA  L +    + L P   TYN LI+   +    +KA+ +   M 
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
             G     + Y+ +I +L+    +  +   +L+ +     I  D  + N +I      GD
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQET--DRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A   +G  +   ++P   TY  ++  L   GR  EA  + EE+ + G++P   +YN 
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ GY   G +KDA  V  EM   G  P   TY+ +I      G+   A  ++KEM  + 
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 401 AKPNSFIYSRILAG 414
             P+   Y  ++ G
Sbjct: 495 ITPDDSTYISLIEG 508



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 17/212 (8%)

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
           T  +N+M+    ++ C          +L +   P+ +T+NT+I      GR     E+  
Sbjct: 116 TTTFNIML----RHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMR 171

Query: 500 EMQERGYF-PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL-PNVVTYTTLVDIYGQ 557
           EM+ERG   P   TY  +I+   +  + ED  ++   M  +G + PN V Y  L+  Y  
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231

Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
            G  + A+     + D+ V+            +    N  ++    + R AEA A+++ M
Sbjct: 232 QGNLEVALRYRGEMVDRGVSM-----------TVATYNLFVHTLFMEGRAAEAHALVEEM 280

Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            E GL PD  TY  L+    +  K  K    +
Sbjct: 281 GEKGLAPDAFTYNILINGYCKEGKEKKAMKMF 312


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 16/475 (3%)

Query: 173 LGRSEKLYEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230
           LG+++ +   F  ++    R T  TYN +I    +  D+E A  L  +M+  G   D + 
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299

Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
           Y+ +I    +  ++D ++    ++E++    E D    N +I  F K G     + F   
Sbjct: 300 YNSMIDGFGKVGRLDDTVC--FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357

Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
            +G GL P   +Y+ ++ A    G   +A   + +++  GL P    Y +L+    K+G 
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
           L DA  + +EM + GV  +  TY+ LID   +A R + A  +  +M+ +   PN   Y+ 
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
           ++ G+       R  ++L E+K  G++PD   Y   I        +  A    + M   G
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
           I+ +++ + TL+D +FK G       L +EM+E        T+ ++I+ L + +      
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 531 RLLGNMRAQ-GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
                +    GL  N   +T ++D             C +   + A   F  M   GL P
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGL-----------CKDNQVEAATTLFEQMVQKGLVP 646

Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
              A  SL++   +     EA A+   M E G+K D++ YT+L+  L   ++  K
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQK 701



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 18/388 (4%)

Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
           N ++  FAK G      RF     G G  P   TY  +I  +   G    A  +FEE+K 
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
            GL P T  YN+++ G+ K+G L D      EM+     PD  TY+ LI+ +   G+   
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350

Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
                +EM+ +  KPN   YS ++  +   G  Q+  +   +M+  G+ P+ + Y  +ID
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410

Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
              K   L  A    + ML  G+E + +T+  LID      R   AEELF +M   G  P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470

Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
              +YN +I+   + +  +    LL  ++ +G+ P+++ Y T   I+G           L
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF--IWGLCS--------L 520

Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
           E +    V     M+  G+K ++L   +L++A+ +     E   +L  MKE  ++  VVT
Sbjct: 521 EKIEAAKV-VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579

Query: 629 YTTLMKALIR-------VDKFHKVFSSY 649
           +  L+  L +       VD F+++ + +
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDF 607



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 188/404 (46%), Gaps = 21/404 (5%)

Query: 245 DSSLLQKLYKEIECDKIELDGQLLNDVIVGFA----------KAGDASKAMRFLGMAQGV 294
           +S L + +  + +CD  ++     N  + GF             G   +A++     +  
Sbjct: 162 NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRF 221

Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            + PKT +   ++   +  G+T + +  F+++  +G +P    YN ++    K G ++ A
Sbjct: 222 RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA 281

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
             +  EM+  G++PD  TY+ +ID +   GR +      +EM+    +P+   Y+ ++  
Sbjct: 282 RGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341

Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
           +   G+     +  +EMK +G++P+   Y+ ++D F K   +  A+  +  M   G+ P+
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401

Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
             T+ +LID + K G    A  L  EM + G      TY  +I+ L + ER ++ + L G
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461

Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
            M   G++PN+ +Y  L+  + ++   D A+E L  L  +           G+KP  L  
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR-----------GIKPDLLLY 510

Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
            + I      ++   A  V+  MKE G+K + + YTTLM A  +
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 238/541 (43%), Gaps = 33/541 (6%)

Query: 109 SLNRVEFKLA-ESYRAVPAPLW--------HSLLKNLCSSNSSIDLAYAVVSWLQKHNLC 159
           S+ R  FK + ESY  V   L+        +S+LK +  S +  D+   + S     N+C
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS---TRNVC 188

Query: 160 YS----YELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKAL 213
                 ++ L+S+LI  LG  E+  + F   +R R+ P T   N L+   A+    +   
Sbjct: 189 VPGFGVFDALFSVLID-LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247

Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
                M   G       Y+++I  + +   ++++  + L++E++   +  D    N +I 
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAA--RGLFEEMKFRGLVPDTVTYNSMID 305

Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
           GF K G     + F    + +   P   TY A+I      G+       + E+K +GLKP
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365

Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
              +Y+ L+  + K G ++ A     +M R G++P+E+TY+ LIDA    G    A  + 
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425

Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
            EM     + N   Y+ ++ G  D    +   ++  +M ++GV P+   YN +I  F K 
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485

Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
             +  A+   + +   GI+PD + + T I       + + A+ +  EM+E G    +  Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545

Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
             +++   +     +   LL  M+   +   VVT+  L+D             C   L  
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL-----------CKNKLVS 594

Query: 574 QAVNAFRVMRTD-GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
           +AV+ F  +  D GL+ +     ++I+   +D +   A  + + M + GL PD   YT+L
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654

Query: 633 M 633
           M
Sbjct: 655 M 655



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 198/429 (46%), Gaps = 8/429 (1%)

Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
           Y+ +I   G+  +L +     +  +     P  +TYNALI+   +   L   L    +M+
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
            +G   + ++YS ++ +  +   +  ++  K Y ++    +  +      +I    K G+
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAI--KFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
            S A R       VG+     TY A+I  L ++ R  EAE +F ++  +G+ P   +YNA
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           L+ G+VK   +  A  +++E++  G+ PD   Y   I    +  + E+A++V+ EM+   
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
            K NS IY+ ++  Y   G       +L EMK   +E     + V+ID   K   +  A+
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 461 AAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
             F+R+ ++ G++ +   +  +ID   K  + + A  LFE+M ++G  P  T Y  +++ 
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
             +Q    +   L   M   G+  +++ YT+LV       +   A   LE +  + ++  
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717

Query: 580 RVMRTDGLK 588
            V+    LK
Sbjct: 718 EVLCISVLK 726



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 26/307 (8%)

Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF-------- 406
           +F    M R+G      +Y ++      A  +  A  VLKEM +S A  + F        
Sbjct: 127 KFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRN 186

Query: 407 -------IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
                  ++  + +   D G  +   Q   +MK   V P T   N ++  F K       
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
              F  M+  G  P   T+N +IDC  K G  + A  LFEEM+ RG  P T TYN MI+ 
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
            G+  R +D       M+     P+V+TY  L++ + + G+    +E            +
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE-----------FY 355

Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
           R M+ +GLKP+ ++ ++L++AF ++    +A      M+  GL P+  TYT+L+ A  ++
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415

Query: 640 DKFHKVF 646
                 F
Sbjct: 416 GNLSDAF 422



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 43/373 (11%)

Query: 166 YSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
           YS L+ A  +   + +A   ++  +R  L P   TY +LI A  +  +L  A  L ++M 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           Q G   + + Y+ +I  L    ++  +  ++L+ +++   +  +    N +I GF KA +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEA--EELFGKMDTAGVIPNLASYNALIHGFVKAKN 487

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
             +A+  L   +G G+ P    Y   I  L +  +   A+ V  E+KE G+K  +  Y  
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAY-------------------- 380
           L+  Y K G   +   ++ EM+   +     T+ +LID                      
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607

Query: 381 ---ANAGRW-------------ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
              ANA  +             E+A  + ++M      P+   Y+ ++ G   +G     
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667

Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
             +  +M   G++ D   Y  ++      N L  A +  + M+ EGI PD +   +++  
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727

Query: 485 HFKCGRYDRAEEL 497
           H++ G  D A EL
Sbjct: 728 HYELGCIDEAVEL 740



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 47/233 (20%), Positives = 111/233 (47%), Gaps = 10/233 (4%)

Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF-LLS 186
           L+ + +  LCS    I+ A  V++ +++  +  +  L+Y+ L+ A  +S    E   LL 
Sbjct: 509 LYGTFIWGLCSL-EKIEAAKVVMNEMKECGI-KANSLIYTTLMDAYFKSGNPTEGLHLLD 566

Query: 187 QRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRT 241
           + + L    T +T+  LI    +N  + KA++  +++  D G   +   ++ +I  L + 
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626

Query: 242 NKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
           N+++++    L++++    +  D      ++ G  K G+  +A+        +G+     
Sbjct: 627 NQVEAA--TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684

Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
            Y +++  LS+  +  +A +  EE+   G+ P      ++LK + ++G + +A
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 182/399 (45%), Gaps = 32/399 (8%)

Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHC--DFINYSLVIQSLTRTNKIDSSLLQK 251
            +YN L++     +  ++AL L+  M  DG  C  D ++YS VI    +   +D  L Q+
Sbjct: 52  FSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKMLDQR 111

Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
           +   +            N +I    KA    KAM  L      G+ P   TY +++    
Sbjct: 112 ISPNV---------VTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162

Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
           +SG+  EA    ++++  G++P    YN+L+    K G   +A  +   M + G+ PD  
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222

Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
           TY  L+  YA  G       +L  M  +   PN +++S ++  Y  + + +    V  +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
           +  G+ P+   Y  +ID   K   +  AM  F++M+ EG+ PD+I +N+LI       ++
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
           ++AEELF EM +RG    T  +N +I+   ++ R  +  +L   M   G+ P+++T    
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL--- 399

Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
                             G +D+A + F    ++GL P+
Sbjct: 400 ------------------GRNDEAKDLFVAFSSNGLVPN 420



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 191/439 (43%), Gaps = 51/439 (11%)

Query: 122 RAVPAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
           R +P    ++ LL  LC  N S +    +         C    + YS +I+   +   L 
Sbjct: 46  RGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD 105

Query: 181 EAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
           +  +L QR     +TYN++I+A  +   ++KA+ +++ M + G   D + Y         
Sbjct: 106 K--MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY--------- 154

Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
                                       N ++ GF  +G   +A+ FL   +  G+ P  
Sbjct: 155 ----------------------------NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDV 186

Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
            TY +++  L  +GR  EA  +F+ + + GLKP    Y  LL+GY   G L +   ++  
Sbjct: 187 VTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDL 246

Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
           M R+G+ P+ + +S+L+ AYA   + E A +V  +M      PN+  Y  ++      G 
Sbjct: 247 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGR 306

Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
            +      ++M   G+ PD+  YN +I +   ++    A   F  ML  GI   TI +N+
Sbjct: 307 VEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNS 366

Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
           +ID H K GR   + +LF+ M   G  P   T       LG   R ++ K L     + G
Sbjct: 367 IIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT-------LG---RNDEAKDLFVAFSSNG 416

Query: 541 LLPNVVTYTTLVD-IYGQS 558
           L+PN  TY  + + I GQ 
Sbjct: 417 LVPNYWTYRLMAENIIGQG 435



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 21/335 (6%)

Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG--VLPDEHTYSL 375
           +A  VF+EL   G+ P   +YN LL G       ++A  ++  M   G    PD  +YS 
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
           +I+ +   G        L +M      PN   Y+ I+A         +  +VL  M  SG
Sbjct: 94  VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
           V PD   YN ++  F        A+    +M S+G+EPD +T+N+L+D   K GR   A 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
           ++F+ M +RG  P  TTY  ++     +    ++  LL  M   G+ PN   ++ LV  Y
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
            +  + +           +A+  F  MR  GL P+ +   ++I+   +  R  +A    +
Sbjct: 267 AKQEKVE-----------EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFE 315

Query: 616 YMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYL 650
            M + GL+PD + Y +L+ +L   DK+ K    +L
Sbjct: 316 QMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 14/265 (5%)

Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
            ++ L+ A A+ + +E+A+ + SKMRQ G + + + Y  VI  L ++ +++ ++L   ++
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML--YFE 315

Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
           ++  + +  D  + N +I          KA          G+   T  + ++I +    G
Sbjct: 316 QMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375

Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
           R IE+  +F+ +   G+KP            + +G   +A+ +      +G++P+  TY 
Sbjct: 376 RVIESGKLFDLMVRIGVKPDI----------ITLGRNDEAKDLFVAFSSNGLVPNYWTYR 425

Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR--TFQVLKEMK 432
           L+ +     G  E    +   ME +    +S + + I+     RGE  R  T+  + + K
Sbjct: 426 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 485

Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLH 457
              +E  T    + + + GKY   H
Sbjct: 486 HFSLEASTASLFIDLLSGGKYQEYH 510


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 213/476 (44%), Gaps = 18/476 (3%)

Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
           Y+ILI+A     + ++A     F++      + +T+  +I+A     ++ +A NL   M+
Sbjct: 187 YNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMK 246

Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
           + G+  + + Y+ ++    +   I  +    LY+E++   +  D    N ++ G  + G 
Sbjct: 247 EAGHIPNVVCYNTLMNGYVKARDIGQA--NMLYEEMKSKAVAPDCTTFNILVAGHYRYGR 304

Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
                R L      G    ++ Y   ++ L  +G   EA    E++ E G+ P   A+N+
Sbjct: 305 EEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNS 364

Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
           ++  Y + G  + A      M + G+ P   T S LI   +   R + AR +L EM V  
Sbjct: 365 IIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEG 424

Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
              N   ++ +L GY   G+    + +  EM+  G+ PD   ++  I+       +  A 
Sbjct: 425 LPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAY 484

Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
             F +M  +G  P+   +N+LI      GR   A  L  EM  +G  P   T NI+IN L
Sbjct: 485 DVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGL 544

Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
            ++ R +    +  NM   GL+P++VTY TL+D Y ++  FD         +D+ VN   
Sbjct: 545 CKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKA--FDTVS------TDEVVNK-- 594

Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
            M   G  P     N  ++     ++ + A  +L+ +   G+ PD VTY T+M  +
Sbjct: 595 -MYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGV 649



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 185/398 (46%), Gaps = 7/398 (1%)

Query: 158 LCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNL 215
           +CY+  +   +    +G++  LYE     + + + P   T+N L++   R    E    L
Sbjct: 255 VCYNTLMNGYVKARDIGQANMLYEEM---KSKAVAPDCTTFNILVAGHYRYGREEDRDRL 311

Query: 216 MSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGF 275
           +  + Q G       Y++ +  L     +D ++  K  +++    I       N +I  +
Sbjct: 312 LRDLSQSGSLSISSLYNICVSGLCWAGWLDEAM--KFLEDMLEKGITPTVVAFNSIIAAY 369

Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
           ++AG   KA +   M    GL P + T +++I  LS   R  EA  +  E+   GL    
Sbjct: 370 SRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINK 429

Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
            A+  LL GY +MG +  A  + +EME  G+ PD   +S  I+  +  G  + A  V  +
Sbjct: 430 AAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQ 489

Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
           M      PN+F+Y+ ++ G+ + G  Q    + +EM   G+ PD    N++I+   K   
Sbjct: 490 MSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGR 549

Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
           +  A   F  M   G+ PD +T+NTLID + K       +E+  +M   G+ P  TTYNI
Sbjct: 550 MKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNI 609

Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
            ++ L    +      +L  + + G++P+ VTY T+++
Sbjct: 610 RLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMN 647



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 184/390 (47%), Gaps = 11/390 (2%)

Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
           + E D  +L+ ++ GF K     +A+  +G  + VGL P ++    +   L   G     
Sbjct: 74  EFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSV 133

Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
             +   +   G +P  + +NA++ G+ + G++K  E ++  M++    PD + Y++LI+A
Sbjct: 134 WKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINA 193

Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
           Y   G+   A   ++ M  +   P+   +  ++  + ++G       +   MK +G  P+
Sbjct: 194 YCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPN 253

Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
              YN +++ + K   +  A   ++ M S+ + PD  T+N L+  H++ GR +  + L  
Sbjct: 254 VVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLR 313

Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
           ++ + G    ++ YNI ++ L      ++  + L +M  +G+ P VV + +++  Y ++ 
Sbjct: 314 DLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA- 372

Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
                     GL ++A  A+R+M   GL PS+L  +SLI    +  R  EA  +L  M  
Sbjct: 373 ----------GLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIV 422

Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
            GL  +   +T L+    R+      +S +
Sbjct: 423 EGLPINKAAFTLLLDGYFRMGDVAGAYSLW 452



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 195/452 (43%), Gaps = 26/452 (5%)

Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLND 270
           +AL ++ +MR+ G        +++ + L R    D   + KL + +         +  N 
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIG--DHGSVWKLLRGMIHQGPRPCNRNFNA 154

Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG 330
           VI+GF + G        L + Q     P    Y  +I A    G+T +A      + ++G
Sbjct: 155 VILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNG 214

Query: 331 LKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESAR 390
             P    +  ++  +   G + +A  +   M+ +G +P+   Y+ L++ Y  A     A 
Sbjct: 215 CTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQAN 274

Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
           ++ +EM+     P+   ++ ++AG+   G  +   ++L+++  SG    +  YN+ +   
Sbjct: 275 MLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGL 334

Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
                L  AM   + ML +GI P  + +N++I  + + G  ++A + +  M + G FP +
Sbjct: 335 CWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSS 394

Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF--------- 561
            T + +I  L +  R ++ + LL  M  +GL  N   +T L+D Y + G           
Sbjct: 395 LTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNE 454

Query: 562 -------DDAIE--------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
                   DA+          + GL D+A + F  M   G  P+N   NSLI  F    R
Sbjct: 455 MEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGR 514

Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
             EA  + + M   GL PD+ T   ++  L +
Sbjct: 515 LQEALMLEREMARKGLLPDIFTTNIIINGLCK 546


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.133    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,026,933,607
Number of Sequences: 23463169
Number of extensions: 413441298
Number of successful extensions: 1872034
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8385
Number of HSP's successfully gapped in prelim test: 4874
Number of HSP's that attempted gapping in prelim test: 1575790
Number of HSP's gapped (non-prelim): 88885
length of query: 664
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 515
effective length of database: 8,863,183,186
effective search space: 4564539340790
effective search space used: 4564539340790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)