BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006012
(664 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/675 (68%), Positives = 541/675 (80%), Gaps = 32/675 (4%)
Query: 1 MILLPPQPL-SVRFPAIHSACPITRHHV-IFQPAFSVSTITGITTATASGESSFSSSSFT 58
M+LL PL S RF +++ HH FQP +S + T+A+ S SSSS+
Sbjct: 1 MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPP--ISAFSATTSASLPSPSPSSSSSYF 58
Query: 59 SKQNDTEEEEEDDDDVLSLQKQRYDFTPLLNFLSENSNSESA----SALASSPSSLNRVE 114
S N + EE+D++ S +RYDF+PLL FLS E A S +SP SLN VE
Sbjct: 59 SSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFGPVELALDSESESEASPESLNPVE 118
Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
F L ESYRAVPAP WHSL+K+L SS SS+ LAYAVVSWLQKHNLC+SYELLYSILIHALG
Sbjct: 119 FDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSYELLYSILIHALG 178
Query: 175 RSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
RSEKLYEAFLLSQ+Q LTPLTYNALI ACARN+D+EKALNL++KMRQDGY DF+NYSLV
Sbjct: 179 RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGV 294
IQSLTR+NKIDS +L +LYKEIE DK+ELD QL+ND+I+GFAK+GD SKA++ LGMAQ
Sbjct: 239 IQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT 298
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GLS KTAT ++I+AL++SGRT+EAEA+FEEL++SG+KPRT+AYNALLKGYVK G LKDA
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
E +VSEME+ GV PDEHTYSLLIDAY NAGRWESARIVLKEME +PNSF++SR+LAG
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+RDRGEWQ+TFQVLKEMKS GV+PD FYNV+IDTFGK+NCL HAM FDRMLSEGIEPD
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+TWNTLIDCH K GR+ AEE+FE M+ RG PC TTYNIMIN G+QERW+D+KRLLG
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE------------------------G 570
M++QG+LPNVVT+TTLVD+YG+SGRF+DAIECLE G
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
LS+QAVNAFRVM +DGLKPS LALNSLINAFGED+RDAEAFAVLQYMKENG+KPDVVTYT
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 631 TLMKALIRVDKFHKV 645
TLMKALIRVDKF KV
Sbjct: 659 TLMKALIRVDKFQKV 673
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 183/381 (48%), Gaps = 7/381 (1%)
Query: 169 LIHALGRSEKLYEAFLLSQRQR---LTPLT--YNALISACARNDDLEKALNLMSKMRQDG 223
+I AL S + EA L + R + P T YNAL+ + L+ A +++S+M + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASK 283
D YSL+I + + +S+ + + KE+E ++ + + + ++ GF G+ K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARI--VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 284 AMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLK 343
+ L + +G+ P Y VI A F+ + G++P +N L+
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 344 GYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
+ K G AE + MER G LP TY+++I++Y + RW+ + +L +M+ P
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
N ++ ++ Y G + + L+EMKS G++P + YN +I+ + + A+ AF
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
M S+G++P + N+LI+ + R A + + M+E G P TY ++ L
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 524 ERWEDVKRLLGNMRAQGLLPN 544
++++ V + M G P+
Sbjct: 668 DKFQKVPVVYEEMIMSGCKPD 688
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 165 LYSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
Y+++I G+ L A +LS+ +T+N LI ++ A + M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+ G Y+++I S + D +++L +++ I + ++ + K+G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDD--MKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
+ A+ L + VGL P + Y A+I A + G + +A F + GLKP A N
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 623
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
+L+ + + +A V+ M+ +GV PD TY+ L+ A +++ +V +EM +S
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Query: 400 HAKPNSFIYSRILAGYR 416
KP+ S + + R
Sbjct: 684 GCKPDRKARSMLRSALR 700
Score = 36.6 bits (83), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
G S++ AF + + L P L N+LI A + +A ++ M+++G + D V Y
Sbjct: 178 GRSEKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNY 235
Query: 630 TTLMKALIRVDKFHKVFSSYLFFNIYK 656
+ ++++L R +K V + +YK
Sbjct: 236 SLVIQSLTRSNKIDSV----MLLRLYK 258
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 239/501 (47%), Gaps = 32/501 (6%)
Query: 168 ILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
I + LGR + KL + L Q L Y ++ A +R EKA++L +M++
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPL-QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKE 238
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
G + Y++++ + + +L L E+ ++ D + V+ A+ G
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+A F + G P T TY A++ +G EA +V +E++E+ + YN L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ YV+ G+ K+A V+ M + GV+P+ TY+ +IDAY AG+ + A + M+ +
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
PN+ Y+ +L+ + ++L +MKS+G P+ +N M+ G
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
F M S G EPD T+NTLI + +CG A +++ EM G+ C TTYN ++N L
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG------RFDDAIE--------- 566
+ W + ++ +M+++G P +Y+ ++ Y + G R ++ I+
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 567 -----CLEGLSDQAV----NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
L +A+ AF + + G KP + NS+++ F + +A +L+ +
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 618 KENGLKPDVVTYTTLMKALIR 638
+E+GL PD+VTY +LM +R
Sbjct: 658 REDGLSPDLVTYNSLMDMYVR 678
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 226/522 (43%), Gaps = 56/522 (10%)
Query: 166 YSILIHALGRSEKLYEAFL------LSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
Y++++ G+ + + L S+ + T + ++SACAR L +A +++
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+ GY + Y+ ++Q + +L + KE+E + D N+++ + +AG
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEAL--SVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
+ +A + M G+ P TY VI A +G+ EA +F +KE+G P T YN
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 340 ALL---------KGYVKM--------------------------GYLKDAEFVVSEMERS 364
A+L +KM G K V EM+
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
G PD T++ LI AY G A + EM + Y+ +L +G+W+
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG-IEPDTITWNTLID 483
V+ +MKS G +P Y++M+ + K + + + + EG I P + TL+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGN-YLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
+FKC +E F ++ GY P +N M+++ ++ + +L ++R GL P
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
++VTY +L+D+Y + G EC +A + + LKP ++ N++I F
Sbjct: 665 DLVTYNSLMDMYVRRG------ECW-----KAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
EA +L M E G++P + TY T + + F ++
Sbjct: 714 RGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 210/482 (43%), Gaps = 18/482 (3%)
Query: 166 YSILIHALGRSEKLYEAF--LLSQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ G++ EA L + P +TYN L++A R ++A ++ M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G + I Y+ VI + + K D +L KL+ ++ + N V+ K
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEAL--KLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+++ ++ L + G SP AT+ ++ N G VF E+K G +P +N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ Y + G DA + EM R+G TY+ L++A A G W S V+ +M+
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
KP YS +L Y G + ++ +K + P ++ K L +
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
AF G +PD + +N+++ + YD+AE + E ++E G P TYN ++++
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY 676
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFR 580
+ + +L + L P++V+Y T++ + C GL +AV
Sbjct: 677 VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF-----------CRRGLMQEAVRMLS 725
Query: 581 VMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
M G++P N+ ++ + AE V++ M +N +P+ +T+ ++ R
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 641 KF 642
K+
Sbjct: 786 KY 787
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 56/351 (15%)
Query: 340 ALLKGYVKMGYLKDAEFVVSEM---ERSGVLP-DEHTYSLLIDAYANAGRWESARIVLKE 395
+L+KG G+ + A F+ + SG L D + + ++ A +L +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYN- 454
+ + + Y+ IL Y G++++ + + MK G P YNV++D FGK
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 455 CLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYN 514
+ D M S+G++ D T +T++ + G A+E F E++ GY P T TYN
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 515 IMINLLGEQERWEDVKRLLGNM--------------------RA---------------Q 539
++ + G+ + + +L M RA +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
G++PN +TYTT++D YG++G+ D+A+ F M+ G P+ N++++
Sbjct: 381 GVMPNAITYTTVIDAYGKAGK-----------EDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKF-HKVF 646
G+ R E +L MK NG P+ T+ T++ AL +DKF ++VF
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVF 479
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 130/315 (41%), Gaps = 39/315 (12%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYNAL++A AR D N++S M+ G+ +YSL++Q + ++++
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG--IERIEN 585
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
I+ +I LL +++ K AL+ S
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKC-----------------------------RALAGS- 615
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
E F K+ G KP +N++L + + AE ++ + G+ PD TY+
Sbjct: 616 -----ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
L+D Y G A +LK +E S KP+ Y+ ++ G+ RG Q ++L EM
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G+ P YN + + + M P+ +T+ ++D + + G+Y A
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 495 EELFEEMQERGYFPC 509
+ +++ + PC
Sbjct: 791 MDFVSKIKT--FDPC 803
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 49/241 (20%)
Query: 411 ILAGYRDRGEWQRT---FQVLKEMKSSG-VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
++ G D G W+R F+ L +SG ++ D + + G+ + A D++
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKI 201
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
+ D + T++ + + G+Y++A +LFE M+E
Sbjct: 202 PLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKE----------------------- 238
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDG 586
G P +VTY ++D++G+ GR + + G+ D+ MR+ G
Sbjct: 239 ------------MGPSPTLVTYNVILDVFGKMGR---SWRKILGVLDE-------MRSKG 276
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
LK +++++A + EA +K G +P VTY L++ + + +
Sbjct: 277 LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336
Query: 647 S 647
S
Sbjct: 337 S 337
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 234/488 (47%), Gaps = 19/488 (3%)
Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRL---TP--LTYNALISACARNDDLEKAL 213
+SY+ + Y+ L+ G+S + EA + L +P +TYN+LISA AR+ L++A+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 214 NLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIV 273
L ++M + G D Y+ ++ R K++S++ +++E+ + + N I
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM--SIFEEMRNAGCKPNICTFNAFIK 427
Query: 274 GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
+ G ++ M+ GLSP T+ ++ +G E VF+E+K +G P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
+ +N L+ Y + G + A V M +GV PD TY+ ++ A A G WE + VL
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
EME KPN Y +L Y + E + +E+ S +EP ++ K
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
+ L A AF + G PD T N+++ + + +A + + M+ERG+ P TY
Sbjct: 608 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
N ++ + + + +L + A+G+ P++++Y T++ Y ++ R DA
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI------ 721
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
F MR G+ P + N+ I ++ D EA V++YM ++G +P+ TY +++
Sbjct: 722 -----FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 634 KALIRVDK 641
++++
Sbjct: 777 DGYCKLNR 784
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/572 (26%), Positives = 248/572 (43%), Gaps = 42/572 (7%)
Query: 110 LNRVEFKLAESYRAVPAPLWHSLLKNL--CSSNSSIDLAYAVVSWLQKHNLCYSY--ELL 165
L+ V +L E ++ P LL L + DLA W K S +
Sbjct: 116 LDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV 175
Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
+I+I LG+ ++ A L L +Y +LISA A + +A+N+ KM
Sbjct: 176 VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 221 QDGYHCDFINYSLVIQSL----TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
+DG I Y++++ T NKI S L ++++ D I D N +I
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITS-----LVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
+ +A + + G S TY A++ S R EA V E+ +G P
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
YN+L+ Y + G L +A + ++M G PD TY+ L+ + AG+ ESA + +EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
+ KPN ++ + Y +RG++ ++ E+ G+ PD +N ++ FG+
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
F M G P+ T+NTLI + +CG +++A ++ M + G P +TYN +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ---------------SGRF 561
+ L WE +++L M PN +TY +L+ Y SG
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 562 DDAIECLEGLS---------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
+ L+ L +A AF ++ G P LNS+++ +G Q A+A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
VL YMKE G P + TY +LM R F K
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 12/347 (3%)
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
A +I+ L GR A +F L+E G +Y +L+ + G ++A V +ME
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 364 SGVLPDEHTYSLLIDAYANAGR-WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G P TY+++++ + G W ++++M+ P+++ Y+ ++ + Q
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
QV +EMK++G D YN ++D +GK + AM + M+ G P +T+N+LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
+ + G D A EL +M E+G P TY +++ + E + MR G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
PN+ T+ + +YG G+F + ++ F + GL P + N+L+ FG
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKI-----------FDEINVCGLSPDIVTWNTLLAVFG 465
Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
++ D+E V + MK G P+ T+ TL+ A R F + + Y
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 141/287 (49%), Gaps = 12/287 (4%)
Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
D +++I GR SA + ++ + + Y+ +++ + + G ++ V
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFK 487
K+M+ G +P YNV+++ FGK + + + ++M S+GI PD T+NTLI C +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
+ A ++FEEM+ G+ TYN ++++ G+ R ++ ++L M G P++VT
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRD 607
Y +L+ Y + G D+A+E L +Q M G KP +L++ F +
Sbjct: 352 YNSLISAYARDGMLDEAME----LKNQ-------MAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 608 AEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNI 654
A ++ + M+ G KP++ T+ +K KF ++ + N+
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 172/412 (41%), Gaps = 42/412 (10%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ R+ K+ A + + R P T+NA I + + + ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
G D + ++ ++ + N +DS + ++KE++ + + N +I +++ G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQ-NGMDSEV-SGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+AM G++P +TY V+ AL+ G ++E V E+++ KP Y +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 341 LLKGYV-----------------------------------KMGYLKDAEFVVSEMERSG 365
LL Y K L +AE SE++ G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
PD T + ++ Y A VL M+ P+ Y+ ++ + ++ ++
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++L+E+ + G++PD YN +I + + + A F M + GI PD IT+NT I +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
++ A + M + G P TYN +++ + R ++ K + ++R
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 244/525 (46%), Gaps = 26/525 (4%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
V A + LLK LC+ + D V+ + + C Y+IL+ L + EA
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 178
Query: 184 LL-----SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
L R +P ++Y +I+ + D +KA + +M G D + Y+ +I
Sbjct: 179 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 238
Query: 236 QSLTRTNKIDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQG 293
+L + +D ++ L + K + + D N ++ G+ +G +A+ FL +
Sbjct: 239 AALCKAQAMDKAMEVLNTMVK----NGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
G+ P TY+ ++ L +GR +EA +F+ + + GLKP Y LL+GY G L +
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
++ M R+G+ PD + +S+LI AYA G+ + A +V +M PN+ Y ++
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G + ++M G+ P YN +I N A ML GI
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
+TI +N++ID H K GR +E+LFE M G P TYN +IN + ++ +LL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
M + GL PN VTY+TL++ Y + R +DA+ F+ M + G+ P +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALV-----------LFKEMESSGVSPDIIT 583
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
N ++ + +R A A + + E+G + ++ TY ++ L +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 224/485 (46%), Gaps = 18/485 (3%)
Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNL-MSKM 219
Y ILI R+ +L F ++ + R+ + + L+ + A+++ + +M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
+ G + +Y+++++ L N+ +L L + + D VI GF K
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
GD+ KA G+ P TY ++I AL + +A V + ++G+ P Y
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
N++L GY G K+A + +M GV PD TYSLL+D GR AR + M
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
KP Y +L GY +G +L M +G+ PD + ++++I + K +
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
AM F +M +G+ P+ +T+ +I K GR + A FE+M + G P YN +I+
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
L +WE + L+ M +G+ N + + +++D + C EG ++
Sbjct: 450 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEGRVIESEKL 498
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
F +M G+KP+ + N+LIN + + EA +L M GLKP+ VTY+TL+ +
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 639 VDKFH 643
+ +
Sbjct: 559 ISRME 563
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 210/463 (45%), Gaps = 49/463 (10%)
Query: 166 YSILIHALGRSE---KLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ +I AL +++ K E + + P +TYN+++ + ++A+ + KMR
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293
Query: 221 QDGYHCDFINYSLVIQSLTRTNK-------IDSSLLQKLYKEIEC--------------- 258
DG D + YSL++ L + + DS + L EI
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALV 353
Query: 259 -----------DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
+ I D + + +I +AK G +AM + GL+P TY AVI
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
L SGR +A FE++ + GL P YN+L+ G + AE ++ EM G+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
+ ++ +ID++ GR + + + M KPN Y+ ++ GY G+ ++
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
L M S G++P+T Y+ +I+ + K + + A+ F M S G+ PD IT+N ++ F+
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVT 547
R A+EL+ + E G +TYNI+++ L + + +D ++ N+ L T
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEART 653
Query: 548 YTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
+ ++D + GR +D+A + F ++GL P+
Sbjct: 654 FNIMIDALLKVGR-----------NDEAKDLFVAFSSNGLVPN 685
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 6/348 (1%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
++ LI A A+ +++A+ + SKMRQ G + + + Y VI L ++ +++ ++L Y
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML---YF 429
Query: 255 EIECDKIELDGQLL-NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
E D+ G ++ N +I G +A + G+ T + ++I +
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
GR IE+E +FE + G+KP YN L+ GY G + +A ++S M G+ P+ TY
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S LI+ Y R E A ++ KEME S P+ Y+ IL G ++ +
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
SG + + YN+++ K A+ F + ++ + T+N +ID K GR D
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669
Query: 494 AEELFEEMQERGYFPCTTTYNIMI-NLLGEQERWEDVKRLLGNMRAQG 540
A++LF G P TY +M N++G Q E++ +L +M G
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIG-QGLLEELDQLFLSMEDNG 716
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 174/407 (42%), Gaps = 30/407 (7%)
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVG--LSPKTATYAAVITALSNSGRTIEAEAVFEE 325
LN + A+ A+ R+ MA+ ++P TY +I +GR A
Sbjct: 53 LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112
Query: 326 LKESGLKPRTKAYNALLKGYVKMGYLKDA-EFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
+ + G + A+ LLKG DA + V+ M G +P+ +Y++L+ +
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDEN 172
Query: 385 RWESARIVLKEM---EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
R + A +L M + P+ Y+ ++ G+ G+ + + EM G+ PD
Sbjct: 173 RSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
YN +I K + AM + M+ G+ PD +T+N+++ + G+ A ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
+ G P TY+++++ L + R + +++ +M +GL P + TY TL+ Y G
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 562 DDAIECL------------------------EGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+ L +G DQA+ F MR GL P+ + ++
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
I + R +A + M + GL P + Y +L+ L +K+ +
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 15/335 (4%)
Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL--GR---SEKLYEA 182
+++SL+ LC+ N + A ++ + +C + SI+ GR SEKL+E
Sbjct: 443 VYNSLIHGLCTCNKW-ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE- 500
Query: 183 FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
L R + P +TYN LI+ +++A+ L+S M G + + YS +I +
Sbjct: 501 --LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
++++ +L+ L+KE+E + D N ++ G + + A G +
Sbjct: 559 ISRMEDALV--LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
+TY ++ L + T +A +F+ L LK + +N ++ +K+G +A+ +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
+G++P+ TY L+ + G E + ME + +S + + I+ RGE
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
Query: 421 WQR--TFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
R T+ + + K +E T + + + GKY
Sbjct: 737 ITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
P TY I+I R + LGN+ +G + + +T L+ R DA++
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN---GLKP 624
+ R M G P+ + N L+ ++ R EA +L M ++ G P
Sbjct: 145 V----------LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
DVV+YTT++ + K +S+Y
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTY 219
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 239/542 (44%), Gaps = 58/542 (10%)
Query: 151 SWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLE 210
S + + L Y L I+ + + L+E+ ++ R TP+ +N L SA AR +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFES-MIQSRPLPTPIDFNRLCSAVARTKQYD 87
Query: 211 KALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKI--DSSLLQKLYK-EIECDKIE----- 262
L M +G D +++I R K+ S+L + +K E D I
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 263 ----LDGQL---------------------LNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
L+G++ ++ +I G G S+A+ + G
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P TY V+ L SG + A +F +++E +K Y+ ++ K G DA +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+EME G+ D TYS LI N G+W+ +L+EM + P+ +S ++ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
G+ ++ EM + G+ PDT YN +ID F K NCLH A FD M+S+G EPD +T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
++ LI+ + K R D LF E+ +G P T TYN ++ + + K L M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS------------------------D 573
++G+ P+VVTY L+D +G + A+E E + D
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
A + F + G+KP + N +I + +EA + + MKE+G PD TY L+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 634 KA 635
+A
Sbjct: 568 RA 569
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 183/399 (45%), Gaps = 8/399 (2%)
Query: 167 SILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQ 221
S LI+ L ++ EA +L R + +TY +++ ++ + AL+L KM +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
+ YS+VI SL + D +L L+ E+E I+ D + +I G G
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDAL--SLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+ L G + P T++A+I G+ +EA+ ++ E+ G+ P T YN+L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ G+ K L +A + M G PD TYS+LI++Y A R + + +E+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
PN+ Y+ ++ G+ G+ ++ +EM S GV P Y +++D L+ A+
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
F++M + +N +I + D A LF + ++G P TYN+MI L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY-GQSG 559
++ + L M+ G P+ TY L+ + G SG
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 9/400 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ +L LC S +S LA + +++ N+ S + YSI+I +L + +A L
Sbjct: 213 YGPVLNRLCKSGNSA-LALDLFRKMEERNIKASV-VQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 189 QRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ + TY++LI + + ++ +M D + +S +I + K
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + ++LY E+ I D N +I GF K +A + + G P TY
Sbjct: 331 LLEA--KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+ +I + + R + +F E+ GL P T YN L+ G+ + G L A+ + EM
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GV P TY +L+D + G A + ++M+ S IY+ I+ G + +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+PD YNVMI K L A F +M +G PD T+N LI
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
H + EL EEM+ G+ ++T ++I++L ++
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 14/359 (3%)
Query: 288 LGMAQGV---GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
LG +G+ G+ T +I + + A +V + G +P T ++ L+ G
Sbjct: 90 LGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
+ G + +A +V M PD T S LI+ GR A +++ M +P+
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
Y +L G + ++M+ ++ Y+++ID+ K A++ F+
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
M +GI+ D +T+++LI G++D ++ EM R P T++ +I++ ++
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 525 RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRT 584
+ + K L M +G+ P+ +TY +L+D + C E +A F +M +
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGF-----------CKENCLHEANQMFDLMVS 378
Query: 585 DGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
G +P + + LIN++ + +R + + + + GL P+ +TY TL+ + K +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 24/318 (7%)
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
+ DA + M +S LP ++ L A A +++ K ME++ + + + +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ Y + + F VL G EPDT ++ +++ F + A+A DRM+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
PD +T +TLI+ GR A L + M E G+ P TY ++N L +
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------ 566
L M + + +VV Y+ ++D + G FDDA+
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
C +G D R M + P + ++LI+ F ++ + EA + M G+ PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 627 VTYTTLMKALIRVDKFHK 644
+TY +L+ + + H+
Sbjct: 351 ITYNSLIDGFCKENCLHE 368
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/617 (26%), Positives = 284/617 (46%), Gaps = 75/617 (12%)
Query: 78 QKQRYDFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLC 137
++Q +PLL L E S+S S S L++ + + S +++ + + S + +L
Sbjct: 39 RRQFCSVSPLLRNLPEEE-SDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLF 97
Query: 138 SSNSSIDLAYAVVSWLQ-----KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLT 192
S + A W+ KH++ YSY L ++LI+ G +++ LL
Sbjct: 98 SLDLDPKTALNFSHWISQNPRYKHSV-YSYASLLTLLINN-GYVGVVFKIRLL------- 148
Query: 193 PLTYNALISACARNDDLEKALNLMSKMRQD-----GYHCDFINYSLVIQSLTRTNKIDSS 247
+I +C D L+L KM +D Y Y+ ++ SL R +D
Sbjct: 149 ------MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDE- 201
Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVI 307
++++Y E+ DK+ + N ++ G+ K G+ +A +++ GL P TY ++I
Sbjct: 202 -MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 308 TA-----------------------------------LSNSGRTIEAEAVFEELKESGLK 332
L + R EA +F ++K+
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
P + Y L+K +A +V EME +G+ P+ HTY++LID+ + ++E AR +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
L +M PN Y+ ++ GY RG + V++ M+S + P+T YN +I + K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
N +H AM ++ML + PD +T+N+LID + G +D A L M +RG P T
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
Y MI+ L + +R E+ L ++ +G+ PNVV YT L+D Y ++G+ D+A LE
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK-- 557
Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
M + P++L N+LI+ D + EA + + M + GL+P V T T L
Sbjct: 558 ---------MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 633 MKALIRVDKFHKVFSSY 649
+ L++ F +S +
Sbjct: 609 IHRLLKDGDFDHAYSRF 625
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 212/470 (45%), Gaps = 27/470 (5%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
TY +LI + DL+ A + ++M G + + Y+ +I L +ID ++ L+
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM--DLF 311
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
+++ D+ + +I + S+A+ + + G+ P TY +I +L +
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ +A + ++ E GL P YNAL+ GY K G ++DA VV ME + P+ TY
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ LI Y + A VL +M P+ Y+ ++ G G + +++L M
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G+ PD Y MID+ K + A FD + +G+ P+ + + LID + K G+ D
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A + E+M + P + T+N +I+ L + ++ L M GL P V T T L+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
+ G FD A C EG A + MR +G+ P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
+SLI +G+ + AF VL+ M++ G +P T+ +L+K L+ +
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 229/522 (43%), Gaps = 53/522 (10%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ SL+ C +D A+ V + + C E+ Y+ LIH L + ++ EA L +
Sbjct: 256 YTSLIMGYCQ-RKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 189 QR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ T TY LI + ++ +ALNL+ +M + G + Y+++I SL K
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 244 IDSSLLQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQ 292
+ + EL GQ+L N +I G+ K G A+ + + +
Sbjct: 374 FEKAR-------------ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLK 352
LSP T TY +I S +A V ++ E + P YN+L+ G + G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 353 DAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRIL 412
A ++S M G++PD+ TY+ +ID+ + R E A + +E PN +Y+ ++
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 413 AGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIE 472
GY G+ +L++M S P++ +N +I L A ++M+ G++
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 473 PDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRL 532
P T LI K G +D A F++M G P TY I + R D + +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
+ MR G+ P++ TY++L+ YG G+ ++ A + + MR G +PS
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQ-----------TNFAFDVLKRMRDTGCEPSQH 708
Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
SLI E ++Y K+ G +P++ + +M+
Sbjct: 709 TFLSLIKHLLE----------MKYGKQKGSEPELCAMSNMME 740
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/557 (24%), Positives = 244/557 (43%), Gaps = 53/557 (9%)
Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDL 209
K + C+ Y++LI +L SE+ EA L + T + TY LI +
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
EKA L+ +M + G + I Y+ +I + I+ ++ + + +E K+ + + N
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV--DVVELMESRKLSPNTRTYN 432
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
++I G+ K+ + KAM L + P TY ++I SG A + + +
Sbjct: 433 ELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
GL P Y +++ K +++A + +E+ GV P+ Y+ LID Y AG+ + A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
++L++M + PNS ++ ++ G G+ + + ++M G++P ++I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
K HA + F +MLS G +PD T+ T I + + GR AE++ +M+E G P
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD-----IYG-QSG---- 559
TY+ +I G+ + +L MR G P+ T+ +L+ YG Q G
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 560 --------RFDDAIECLEGLSDQAVNA-----------------FRV--------MRTDG 586
FD +E LE + + +V RV R +G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
+ PS L N+L++ + ++ EA V+ M G P + + L+ L + K K
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK--KGEKER 849
Query: 647 SSYLFFNIYKMLSYSGE 663
+ +F N+ + Y E
Sbjct: 850 GTSVFQNLLQCGYYEDE 866
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 181/391 (46%), Gaps = 50/391 (12%)
Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
Y ++ +L+ G E + V+ E+ E + P YN ++ GY K+G +++A VS+
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RD 417
+ +G+ PD TY+ LI Y +SA V EM + + N Y+ ++ G R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 418 RGEWQ---------------RTFQVL-----------------KEMKSSGVEPDTHFYNV 445
E RT+ VL KEM+ +G++P+ H Y V
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 446 MIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERG 505
+ID+ A +ML +G+ P+ IT+N LI+ + K G + A ++ E M+ R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 506 YFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI 565
P T TYN +I + + + +L M + +LP+VVTY +L+D +SG FD A
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
L ++D+ GL P S+I++ + +R EA + +++ G+ P+
Sbjct: 483 RLLSLMNDR-----------GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 626 VVTYTTLMKALI---RVDKFHKVFSSYLFFN 653
VV YT L+ +VD+ H + L N
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 205/462 (44%), Gaps = 34/462 (7%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+TYN+LI R+ + + A L+S M G D Y+ +I SL ++ +++ + L+
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC--DLF 520
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
+E + + + +I G+ KAG +A L P + T+ A+I L
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
G+ EA + E++ + GL+P L+ +K G A +M SG PD HTY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ I Y GR A ++ +M + P+ F YS ++ GY D G+ F VLK M+
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 434 SGVEPDTHFYNVMID-----TFGKYN------CLHHAMAAFD-------RMLSEGIEPDT 475
+G EP H + +I +GK C M FD +M+ + P+
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQE-RGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
++ LI + G AE++F+ MQ G P +N +++ + ++ + +++
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
+M G LP + + L+ G + +G ++ + F+ + G LA
Sbjct: 821 DMICVGHLPQLESCKVLI-----CGLYK------KGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 595 NSLINAFGEDQRDAEAF-AVLQYMKENGLKPDVVTYTTLMKA 635
+I+ G+ Q EAF + M++NG K TY+ L++
Sbjct: 870 KIIIDGVGK-QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 207/500 (41%), Gaps = 69/500 (13%)
Query: 116 KLAESYRAVP-APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
+L ES + P ++ L+K C SN + A V++ + + + + Y+ LI
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDV-VTYNSLIDGQC 473
Query: 175 RS---EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
RS + Y L + L P TY ++I + ++ +E+A +L + Q G + + +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 230 NYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
Y+ +I + K+D + +L+K+ + C L N +I G G +A
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLT---FNALIHGLCADGKLKEATLL 589
Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
+GL P +T +I L G A + F+++ SG KP Y ++ Y +
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
G L DAE ++++M +GV PD TYS LI Y + G+ A VLK M + +P+
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 408 YSRI------------------LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+ + L + E+ ++L++M V P+ Y +I
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 450 FGKYNCLHHAMAAFDRM-LSEGIEPDTITWNTLIDCHFK--------------------- 487
+ L A FD M +EGI P + +N L+ C K
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Query: 488 ---------CGRYDRAEE-----LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
CG Y + E+ +F+ + + GY+ + I+I+ +G+Q E L
Sbjct: 830 QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Query: 534 GNMRAQGLLPNVVTYTTLVD 553
M G + TY+ L++
Sbjct: 890 NVMEKNGCKFSSQTYSLLIE 909
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 252/524 (48%), Gaps = 27/524 (5%)
Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKL 179
R +P L+ ++K C+ N ID A +++ + KH C ++Y LIH+L + ++
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNE-IDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRV 268
Query: 180 YEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLV 234
EA L + L T+N +I + D + +A ++++M G+ D I Y +
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 235 IQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG-MAQG 293
+ L + ++D++ + L+ I +I + N +I GF G A L M
Sbjct: 329 MNGLCKIGRVDAA--KDLFYRIPKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
G+ P TY ++I G A V +++ G KP +Y L+ G+ K+G + +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A V++EM G+ P+ ++ LI A+ R A + +EM KP+ + ++ +++
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G + E + +L++M S GV +T YN +I+ F + + A + M+ +G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
D IT+N+LI + G D+A LFE+M G+ P + NI+IN L E+
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLA 593
M +G P++VT+ +L++ ++GR +D + FR ++ +G+ P +
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL-----------TMFRKLQAEGIPPDTVT 671
Query: 594 LNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
N+L++ + +A +L E+G P+ T++ L++++I
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 232/485 (47%), Gaps = 23/485 (4%)
Query: 161 SYELLYSILIHALGRSEKLYEAF---LLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
SY ++ IL+ G K+ +LS++ T T+ ++ A ++++ AL+L+
Sbjct: 184 SYNVVLEILVS--GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
M + G + + Y +I SL++ N+++ +L +L +E+ D + NDVI+G K
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL--QLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
++A + + G +P TY ++ L GR A+ +F + KP
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
+N L+ G+V G L DA+ V+S+M S G++PD TY+ LI Y G A VL +M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
KPN + Y+ ++ G+ G+ + VL EM + G++P+T +N +I F K + +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A+ F M +G +PD T+N+LI + A L +M G T TYN +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
IN + ++ ++L+ M QG + +TY +L+ C G D+A
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL-----------CRAGEVDKAR 584
Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
+ F M DG PSN++ N LIN EA + M G PD+VT+ +L+ L
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 637 IRVDK 641
R +
Sbjct: 645 CRAGR 649
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 181/398 (45%), Gaps = 31/398 (7%)
Query: 271 VIVGFAKAGDASKAM-RFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
V++G A K + R L + G+ K + + +++ +G + + E++
Sbjct: 116 VLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175
Query: 330 -GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
+P K+YN +L+ V K A V +M + P T+ +++ A+ +S
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L++M PNS IY ++ Q+L+EM G PD +N +I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
K++ ++ A +RML G PD IT+ L++ K GR D A++LF + + P
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----P 351
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNM-RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE- 566
+N +I+ R +D K +L +M + G++P+V TY +L+ Y + G A+E
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 567 -----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
C G D+A N M DGLKP+ + N LI+AF +
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
+ R EA + + M G KPDV T+ +L+ L VD+
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 26/443 (5%)
Query: 215 LMSKMRQDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVI 272
LM +MR + Y C+ F +Y++V++ L N + ++ ++ KI V+
Sbjct: 168 LMLEMR-NVYSCEPTFKSYNVVLEILVSGNC--HKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 273 VGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLK 332
F + A+ L G P + Y +I +LS R EA + EE+ G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIV 392
P + +N ++ G K + +A +V+ M G PD+ TY L++ GR ++A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA--- 341
Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFG 451
K++ KP I++ ++ G+ G VL +M +S G+ PD YN +I +
Sbjct: 342 -KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
K + A+ M ++G +P+ ++ L+D K G+ D A + EM G P T
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-DAIECLEG 570
+N +I+ ++ R + + M +G P+V T+ +L+ SG + D I+
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI-----SGLCEVDEIK---- 511
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
A+ R M ++G+ + + N+LINAF EA ++ M G D +TY
Sbjct: 512 ---HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 631 TLMKALIR---VDKFHKVFSSYL 650
+L+K L R VDK +F L
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKML 591
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 2/330 (0%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN+LI + + AL ++ MR G + +Y++++ + KID + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA--YNVLN 448
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E+ D ++ + N +I F K +A+ G P T+ ++I+ L
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A + ++ G+ T YN L+ +++ G +K+A +V+EM G DE TY+
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI AG + AR + ++M P++ + ++ G G + + KEM
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G PD +N +I+ + + + F ++ +EGI PDT+T+NTL+ K G A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQE 524
L +E E G+ P T++I++ + QE
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 149/347 (42%), Gaps = 15/347 (4%)
Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
Y +I L +G + + ++K+ G+ + + ++++ Y K G+ ++ EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 362 ERS-GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
P +Y+++++ + + A V +M P F + ++ + E
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
+L++M G P++ Y +I + K N ++ A+ + M G PD T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
+I K R + A ++ M RG+ P TY ++N L + R + K L +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
P +V + TL+ + GR DDA L SD + G+ P NSLI
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVL---SDMVTSY-------GIVPDVCTYNSLIYG 398
Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
+ ++ A VL M+ G KP+V +YT L+ ++ K + ++
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNL---CYSYELLYSILIHALGRSEKLYEAF-- 183
++SL+ LC + ++ +A+ WL + + + + Y+ LI+A R ++ EA
Sbjct: 497 FNSLISGLCEVD---EIKHAL--WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 184 ---LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
++ Q L +TYN+LI R +++KA +L KM +DG+ I+ +++I L R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
+ ++ ++ + KE+ D N +I G +AG + Q G+ P T
Sbjct: 612 SGMVEEAV--EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
T+ +++ L G +A + +E E G P + ++ LL+ + L F
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 261/554 (47%), Gaps = 28/554 (5%)
Query: 101 SALASSPSSLNR--VEFKLAESYRAVPAPLWH---SLLKNLCSSNSSIDLAYAVVSWLQK 155
S L S+ + +N+ V L E + + P H S+L N S + LA AV+ + K
Sbjct: 85 SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 144
Query: 156 HNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDL 209
L Y ++ S L++ S+++ EA L + +T +T+N LI ++
Sbjct: 145 --LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
+A+ L+ +M G D + Y +V+ L + D+ L L ++E K+E + N
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG--DTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I G K A+ + G+ P TY+++I+ L N GR +A + ++ E
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
+ P ++AL+ +VK G L +AE + EM + + P TYS LI+ + R + A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+ + + M H P+ Y+ ++ G+ + +V +EM G+ +T YN++I
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+ A F M+S+G+ P+ +T+NTL+D K G+ ++A +FE +Q P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
TYNIMI + + + ED L N+ +G+ P+VV Y T++ + C +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF-----------CRK 549
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
G ++A F+ M+ DG P++ N+LI A D + +++ M+ G D T
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 630 TTLMKAL--IRVDK 641
+ L R+DK
Sbjct: 610 GLVTNMLHDGRLDK 623
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 218/460 (47%), Gaps = 17/460 (3%)
Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R + + ++ L+SA A+ + + ++L +M+ G + YS++I R ++
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
+ +L L K+ K I LLN G+ + S+A+ + G P T
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLN----GYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
T+ +I L + EA A+ + + G +P Y ++ G K G A ++++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
E+ + P Y+ +ID + A + KEME +PN YS +++ + G W
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
++L +M + PD ++ +ID F K L A +D M+ I+P +T+++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
I+ R D A+++FE M + FP TYN +I + +R E+ + M +GL
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
+ N VTY L+ Q+G +C D A F+ M +DG+ P+ + N+L++
Sbjct: 428 VGNTVTYNILIQGLFQAG------DC-----DMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
++ + +A V +Y++ + ++P + TY +++ + + K
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 203/449 (45%), Gaps = 13/449 (2%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A+ L +M + I +S ++ ++ + NK D ++ L ++++ I +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQNLGIPHNHYTY 119
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
+ +I F + A+ LG +G P T ++++ +S R EA A+ +++
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
+G +P T +N L+ G +A ++ M G PD TY ++++ G +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L +ME +P IY+ I+ G + KEM++ G+ P+ Y+ +I
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ I PD T++ LID K G+ AE+L++EM +R P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TY+ +IN +R ++ K++ M ++ P+VVTY TL+ + + R ++ +E
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME-- 417
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + + N LI + A + + M +G+ P+++T
Sbjct: 418 ---------VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
Y TL+ L + K K + + KM
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 244/513 (47%), Gaps = 21/513 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S + LA AV+ + K L Y +++ S L++ +++ EA L +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMK--LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ +T+N LI ++ +A+ L+ +M G D Y V+ L +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID +L L K++E KIE D + +I + + A+ G+ P TY
Sbjct: 236 IDLAL--SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L N GR +A + ++ E + P ++AL+ +VK G L +AE + EM +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+ +
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T YN +I + A F +M+S+G+ PD IT++ L+D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q+ P TYNIMI + + + ED L ++ +G+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NV+ YTT++ + C +GL ++A FR M+ DG P++ N+LI A
Sbjct: 534 NVIIYTTMISGF-----------CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
D A + +++ M+ G D T + ++ L
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 212/468 (45%), Gaps = 26/468 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
+YN LI+ R L AL ++ KM + GY D + S ++ +I ++ L
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV--ALVD 174
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++ + + + N +I G AS+A+ + G P TY V+ L G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A ++ +++++ ++ Y ++ + DA + +EM+ G+ P+ TY+
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI N GRW A +L +M PN +S ++ + G+ ++ EM
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
++PD Y+ +I+ F ++ L A F+ M+S+ P+ +T+NTLI K R +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
ELF EM +RG T TYN +I L + + +++ M + G+ P+++TY+ L+D
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
+ G+ + A+ C G + + F + G+KP+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ ++I+ F EA A+ + MKE+G P+ TY TL++A +R
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 217/460 (47%), Gaps = 17/460 (3%)
Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R + + +N L+SA A+ + + ++L +M+ D +Y+++I R ++
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
+ +L L K+ K E D L+ ++ G+ S+A+ + + P T
Sbjct: 131 LPLALAVLGKMMKL----GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
T+ +I L + EA A+ + + G +P Y ++ G K G + A ++ +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
E+ + D Y+ +IDA N A + EM+ +PN Y+ ++ + G W
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
++L +M + P+ ++ +ID F K L A +D M+ I+PD T+++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
I+ R D A+ +FE M + FP TYN +I + +R E+ L M +GL
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
+ N VTY TL+ Q+G +C D A F+ M +DG+ P + + L++
Sbjct: 427 VGNTVTYNTLIQGLFQAG------DC-----DMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
+ + +A V +Y++++ ++PD+ TY +++ + + K
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 201/449 (44%), Gaps = 13/449 (2%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A++L +M Q + ++ ++ ++ + NK D L+ L + ++ +I D
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD--LVISLGERMQNLRISYDLYSY 118
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N +I F + A+ LG +G P T ++++ + R EA A+ +++
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
+P T +N L+ G +A ++ M G PD TY +++ G +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +LK+ME + + IY+ I+ + + EM + G+ P+ YN +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ I P+ +T++ LID K G+ AE+L++EM +R P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TY+ +IN +R ++ K + M ++ PNVVTY TL+ + ++ R ++ +E
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-- 416
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + + N+LI + A + + M +G+ PD++T
Sbjct: 417 ---------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
Y+ L+ L + K K + + KM
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKM 496
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 8/459 (1%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+TYN LI + ++ L+ M G + I+Y++VI L R ++ + +
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE--VSFVL 298
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
E+ LD N +I G+ K G+ +A+ GL+P TY ++I ++ +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
G A ++++ GL P + Y L+ G+ + GY+ +A V+ EM +G P TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ LI+ + G+ E A VL++M+ P+ YS +L+G+ + +V +EM
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G++PDT Y+ +I F + A ++ ML G+ PD T+ LI+ + G ++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A +L EM E+G P TY+++IN L +Q R + KRLL + + +P+ VTY TL++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 554 IYGQSGRFDDAIE-----CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
+ F + C++G+ +A F M KP A N +I+
Sbjct: 599 -NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
+A+ + + M ++G VT L+KAL + K +++ S
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 184/390 (47%), Gaps = 25/390 (6%)
Query: 271 VIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE-AEAVFEELKES 329
V+ +++ KA+ + +AQ G P +Y AV+ A S R I AE VF+E+ ES
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
+ P YN L++G+ G + A + +ME G LP+ TY+ LID Y + +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L+ M + +PN Y+ ++ G G + VL EM G D YN +I
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+ K H A+ ML G+ P IT+ +LI K G +RA E ++M+ RG P
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
TY +++ ++ + R+L M G P+VVTY L++ + +G+ +DAI LE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 570 -----GLS-------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
GLS D+A+ R M G+KP + +SLI F E +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 606 RDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
R EA + + M GL PD TYT L+ A
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 208/445 (46%), Gaps = 12/445 (2%)
Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
T ++ ++ + +R ++KAL+++ + G+ ++Y+ V+ + R+ + + S +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR-NISFAEN 191
Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
++KE+ ++ + N +I GF AG+ A+ + G P TY +I
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
+ + + + GL+P +YN ++ G + G +K+ FV++EM R G DE
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
TY+ LI Y G + A ++ EM P+ Y+ ++ G R + L +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
+ G+ P+ Y ++D F + ++ A M G P +T+N LI+ H G+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
+ A + E+M+E+G P +Y+ +++ ++ R+ M +G+ P+ +TY++L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
+ + + R + +A + + M GL P +LINA+ + +A
Sbjct: 492 IQGFCEQRR-----------TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 612 AVLQYMKENGLKPDVVTYTTLMKAL 636
+ M E G+ PDVVTY+ L+ L
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 202/421 (47%), Gaps = 28/421 (6%)
Query: 166 YSILIHALGRSEKLYE-AFLLSQRQR----LTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+++I+ L R ++ E +F+L++ R L +TYN LI + + +AL + ++M
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G I Y+ +I S+ + ++ ++ + ++ + + + ++ GF++ G
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAM--EFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++A R L G SP TY A+I +G+ +A AV E++KE GL P +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
+L G+ + + +A V EM G+ PD TYS LI + R + A + +EM
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P+ F Y+ ++ Y G+ ++ Q+ EM GV PD Y+V+I+ K + A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 461 AAFDRMLSEGIEPDTITWNTLID-C---HFK---------C--GRYDRAEELFEEMQERG 505
++ E P +T++TLI+ C FK C G A+++FE M +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 506 YFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
+ P T YNIMI+ R D+++ L M G L + VT LV + G+ +
Sbjct: 636 HKPDGTAYNIMIH---GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 563 D 563
+
Sbjct: 693 E 693
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQER-WEDVKRLLGNMRAQGLLPNVVTYTT 550
D+A + Q G+ P +YN +++ +R + + M + PNV TY
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
L+ + C G D A+ F M T G P+ + N+LI+ + + ++ +
Sbjct: 211 LIRGF-----------CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 611 FAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
F +L+ M GL+P++++Y ++ L R + +V
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 22/192 (11%)
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
H + F + I + + TL D + A +F+ +QE Y C +T ++
Sbjct: 88 HILTKFKLYKTAQILAEDVAAKTLDD--------EYASLVFKSLQET-YDLCYSTSSVFD 138
Query: 518 NLLGEQERWEDVKRLLGNM---RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQ 574
++ R + + L + +A G +P V++Y ++D +S R E
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE-------- 190
Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMK 634
N F+ M + P+ N LI F A + M+ G P+VVTY TL+
Sbjct: 191 --NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 635 ALIRVDKFHKVF 646
++ K F
Sbjct: 249 GYCKLRKIDDGF 260
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/469 (27%), Positives = 216/469 (46%), Gaps = 34/469 (7%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
T + +I+ R L A + M K+ + GY D + ++ ++ L ++ +L
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL------ 178
Query: 255 EIECDKIELDGQ----LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITAL 310
E+ +E+ + LN ++ G G S A+ + G P TY V+ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 311 SNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDE 370
SG+T A + +++E +K Y+ ++ G K G L +A + +EME G D
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 371 HTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKE 430
TY+ LI + NAGRW+ +L++M PN +S ++ + G+ + Q+LKE
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 431 MKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
M G+ P+T YN +ID F K N L A+ D M+S+G +PD +T+N LI+ + K R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
D ELF EM RG T TYN ++ + + E K+L M ++ + P++V+Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 551 LVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDG 586
L+D +G + A+E C D A + F + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
+K A N +I+ ++A + + M E G PD +TY L++A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 202/440 (45%), Gaps = 13/440 (2%)
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
+ A++L M Q I+++ + ++ +T + + L+ L K++E I L+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE--LVLALCKQMESKGIAHSIYTLS 127
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I F + S A +G +G P T + ++ L R EA + + + E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G KP N L+ G G + DA ++ M +G P+E TY +++ +G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L++ME + K ++ YS I+ G G F + EM+ G + D YN +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
F M+ I P+ +T++ LID K G+ A++L +EM +RG P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
T TYN +I+ ++ R E+ +++ M ++G P+++T+ L++ Y ++ R DD +E
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE--- 424
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
FR M G+ + + N+L+ F + + A + Q M ++PD+V+Y
Sbjct: 425 --------LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 630 TTLMKALIRVDKFHKVFSSY 649
L+ L + K +
Sbjct: 477 KILLDGLCDNGELEKALEIF 496
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 199/433 (45%), Gaps = 15/433 (3%)
Query: 128 LWHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
++++LL LC + +++L +V K L + + L++ L + K+ +A +
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL-----ITLNTLVNGLCLNGKVSDAVV 214
Query: 185 LSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L R T +TY +++ ++ A+ L+ KM + D + YS++I L
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
+ +D++ L+ E+E + D N +I GF AG + L +SP
Sbjct: 275 KDGSLDNAF--NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
T++ +I + G+ EA+ + +E+ + G+ P T YN+L+ G+ K L++A +V
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
M G PD T+++LI+ Y A R + + +EM + N+ Y+ ++ G+ G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
+ + ++ +EM S V PD Y +++D L A+ F ++ +E D +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
+I + D A +LF + +G YNIMI+ L ++ L M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 540 GLLPNVVTYTTLV 552
G P+ +TY L+
Sbjct: 573 GHAPDELTYNILI 585
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 171/372 (45%), Gaps = 17/372 (4%)
Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
+VG KA DA R M Q L P + + +A++ + + A+ ++++ G+
Sbjct: 64 LVGI-KADDAVDLFR--DMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI 119
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW-ESAR 390
+ ++ + + L A + ++ + G PD ++ L++ R E+
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 391 IVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTF 450
+V + +E+ H KP + ++ G G+ ++ M +G +P+ Y +++
Sbjct: 180 LVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 451 GKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
K AM +M I+ D + ++ +ID K G D A LF EM+ +G+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 511 TTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG 570
TYN +I RW+D +LL +M + + PNVVT++ L+D + + G+ +A
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA------ 352
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
DQ + + M G+ P+ + NSLI+ F ++ R EA ++ M G PD++T+
Sbjct: 353 --DQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 631 TLMKALIRVDKF 642
L+ + ++
Sbjct: 408 ILINGYCKANRI 419
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 257/552 (46%), Gaps = 28/552 (5%)
Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
L S+ + +N+ E ++ + + H S+ N S + LA AV++ + K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146
Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
L Y +++ S L++ S+++ +A L + + T+ LI ++ +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
A+ L+ +M Q G D + Y V+ L + ID +L L K++E KIE D + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--SLLKKMEKGKIEADVVIYNTI 264
Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
I G K A+ G+ P TY+++I+ L N GR +A + ++ E +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
P ++AL+ +VK G L +AE + EM + + PD TYS LI+ + R + A+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ + M PN YS ++ G+ + ++ +EM G+ +T Y +I F
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
+ +A F +M+S G+ P+ +T+N L+D K G+ +A +FE +Q P
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
TYNIMI + + + ED L N+ +G+ PNV+ Y T++ + C +G
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF-----------CRKGS 553
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
++A + + M+ DG P++ N+LI A D + +++ M+ G D T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 632 LMKALI--RVDK 641
+ L R+DK
Sbjct: 614 VTNMLHDGRLDK 625
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 218/448 (48%), Gaps = 17/448 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + E ++L +M+ G D YS+ I R +++ +L L K+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K E D L+ ++ G+ + S A+ + +G P T T+ +I L
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ +++ + G +P Y ++ G K G + A ++ +ME+ + D Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID + A + EM+ +P+ F YS +++ + G W ++L +M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ ++ +ID F K L A +D M+ I+PD T+++LI+ R D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+ +FE M + FP TY+ +I + +R E+ L M +GL+ N VTYTTL
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL-- 439
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M + G+ P+ L N L++ ++ + A+A V
Sbjct: 440 IHG----FFQARDC-----DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
+Y++ + ++PD+ TY +++ + + K
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 175/374 (46%), Gaps = 15/374 (4%)
Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
Q +G+S TY+ I + A AV ++ + G +P ++LL GY +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
DA +V +M G PD T++ LI + A ++ +M +P+ Y +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
+ G RG+ +LK+M+ +E D YN +ID KY + A+ F M ++GI
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
PD T+++LI C GR+ A L +M ER P T++ +I+ ++ + + ++
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
L M + + P++ TY++L++ + C+ D+A + F +M + P+
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGF-----------CMHDRLDEAKHMFELMISKDCFPNV 398
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR---VDKFHKVFSS 648
+ ++LI F + +R E + + M + GL + VTYTTL+ + D VF
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 649 YLFFNIY-KMLSYS 661
+ ++ +L+Y+
Sbjct: 459 MVSVGVHPNILTYN 472
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER + + Y I+ N L + + +D L G+M P++V + L+ + +F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
+ I E G+S +N F ++M+ G +P + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
L+N + +R ++A A++ M E G KPD T+TTL+ L
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 31/499 (6%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
+S L A+ ++++ L ++ L + +N +I+ R L A + M K+
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + I +S +I L ++ S L+ + + +E + D +N ++ G +G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRV-SEALELVDRMVEMGH-KPDLITINTLVNGLCLSGK 208
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++AM + G P TY V+ + SG+T A + +++E +K Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ G K G L +A + +EME G+ + TY++LI + NAGRW+ +L++M
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN +S ++ + G+ + ++ KEM G+ PDT Y +ID F K N L A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
D M+S+G +P+ T+N LI+ + K R D ELF +M RG T TYN +I
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS-------- 572
E + K L M ++ + PN+VTY L+D +G + A+E E +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 573 ----------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
D A + F + G+KP N +I + +EA + +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 617 MKENGLKPDVVTYTTLMKA 635
M+E+G PD TY L++A
Sbjct: 569 MEEDGHAPDGWTYNILIRA 587
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 187/408 (45%), Gaps = 13/408 (3%)
Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
I++S + ++ +T + D L+ L K++E I + L+ +I F + A +
Sbjct: 89 IDFSRLFSAIAKTKQYD--LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
G +G P T T++ +I L GR EA + + + E G KP N L+ G
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
G +A ++ +M G P+ TY +++ +G+ A +L++ME + K ++ Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
S I+ G G F + EM+ G+ + YN++I F M+
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
I P+ +T++ LID K G+ AEEL +EM RG P T TY +I+ ++ +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
+++ M ++G PN+ T+ L++ Y ++ R DD +E FR M G+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE-----------LFRKMSLRGVV 435
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
+ N+LI F E + A + Q M + P++VTY L+ L
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 204/451 (45%), Gaps = 15/451 (3%)
Query: 129 WHSLLKNLC---SSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL 185
+ +L+ LC + +++L +V K +L + + L++ L S K EA LL
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDL-----ITINTLVNGLCLSGKEAEAMLL 215
Query: 186 SQRQ-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTR 240
+ + +TY +++ ++ A+ L+ KM + D + YS++I L +
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 241 TNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKT 300
+D++ L+ E+E I + N +I GF AG + L ++P
Sbjct: 276 HGSLDNAF--NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 301 ATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE 360
T++ +I + G+ EAE + +E+ G+ P T Y +L+ G+ K +L A +V
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
M G P+ T+++LI+ Y A R + + ++M + ++ Y+ ++ G+ + G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
++ +EM S V P+ Y +++D A+ F+++ +E D +N
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
+I + D A +LF + +G P TYNIMI L ++ + + L M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
P+ TY L+ + G +++ +E L
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 8/407 (1%)
Query: 121 YRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLY 180
Y P + + + N+ + LA ++ +++ N+ + YSI+I L + L
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD-AVKYSIIIDGLCKHGSLD 280
Query: 181 EAFLLSQRQRLTPLT-----YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
AF L + +T YN LI + L+ M + + + + +S++I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
S + K+ + ++L+KE+ I D +I GF K KA + + + G
Sbjct: 341 DSFVKEGKLREA--EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
P T+ +I + R + +F ++ G+ T YN L++G+ ++G L A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
+ EM V P+ TY +L+D + G E A + +++E S + + IY+ I+ G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + + + + GV+P YN+MI K L A F +M +G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE 522
T+N LI H G ++ +L EE++ G+ +T ++I++L +
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 164/371 (44%), Gaps = 26/371 (7%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P ++ + +A++ + + A+ ++++ G+ + ++ + + L A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRW-ESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
+ ++ + G P+ T+S LI+ GR E+ +V + +E+ H KP+ + ++ G
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLC 204
Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
G+ ++ +M G +P+ Y +++ K AM +M I+ D +
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
++ +ID K G D A LF EM+ +G TYNI+I RW+D +LL +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLS 572
+ + PNVVT++ L+D + + G+ +A E C E
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
D+A +M + G P+ N LIN + + R + + + M G+ D VTY TL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 633 MKALIRVDKFH 643
++ + K +
Sbjct: 445 IQGFCELGKLN 455
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 135/288 (46%), Gaps = 11/288 (3%)
Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
+ +ME G+ + +T S++I+ + + A + ++ +PN+ +S ++ G
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 417 DRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTI 476
G +++ M G +PD N +++ AM D+M+ G +P+ +
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 477 TWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNM 536
T+ +++ K G+ A EL +M+ER Y+I+I+ L + ++ L M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 537 RAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
+G+ N++TY L+ + +GR+DD + L + + +N P+ + +
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN-----------PNVVTFSV 338
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
LI++F ++ + EA + + M G+ PD +TYT+L+ + + K
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 29/299 (9%)
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
E S L+D A + A + ++M S P +SR+ + ++ + K
Sbjct: 58 ERLRSGLVDIKA-----DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
+M+ G+ + + ++MI+ F + L A +A +++ G EP+TIT++TLI+ G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
R A EL + M E G+ P T N ++N L + + L+ M G PN VTY
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 550 TLVDIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTD 585
++++ +SG+ A+E C G D A N F M
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
G+ + + N LI F R + +L+ M + + P+VVT++ L+ + ++ K +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 18/471 (3%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQ---RQRLTP--LTYNALISACARNDDLEKALNLMSK 218
+ YSIL+ L R++++ +A+ + + ++ P + YN LI + L KA+ +
Sbjct: 344 ITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDL 403
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M G Y+ +I+ + + D++ ++L KE+ ++ VI
Sbjct: 404 MVSKGLSLTSSTYNTLIKGYCKNGQADNA--ERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
A+RF+G +SP +I+ L G+ +A ++ + G T+
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
NALL G + G L +A + E+ G + D +Y+ LI + + A + L EM
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
KP+++ YS ++ G + + + Q + K +G+ PD + Y+VMID K
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
FD M+S+ ++P+T+ +N LI + + GR A EL E+M+ +G P + TY +I
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
+ R E+ K L MR +GL PNV YT L+D YG+ G+ +ECL
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK-VECL---------- 750
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
R M + + P+ + +I + D EA +L M+E G+ PD +TY
Sbjct: 751 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 209/475 (44%), Gaps = 43/475 (9%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA-- 182
P + +S+L + I AY V+ + K + ++Y+ LI + + L +A
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV-IVYNNLIDSFIEAGSLNKAIE 399
Query: 183 ---FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
++S+ LT TYN LI +N + A L+ +M G++ + +++ VI L
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAM----RFL------- 288
DS+L + E+ + G LL +I G K G SKA+ +FL
Sbjct: 460 SHLMFDSAL--RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517
Query: 289 ---------GMAQ---------------GVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
G+ + G G +Y +I+ + EA +
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
E+ + GLKP Y+ L+ G M +++A + +R+G+LPD +TYS++ID A
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
R E + EM + +PN+ +Y+ ++ Y G ++ ++MK G+ P++ Y
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+I + + A F+ M EG+EP+ + LID + K G+ + E L EM +
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
P TY +MI + RLL MR +G++P+ +TY + Y + G
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 34/447 (7%)
Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK--EIECDKIE 262
+ D AL++ + G ++++ SL R N+ QK + ++ C +
Sbjct: 216 KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE-----FQKCCEAFDVVCKGVS 270
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
D L I F K G +A++ + G++P T+ VI L GR EA
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
E++ E G++P Y+ L+KG + + DA FV+ EM + G P+ Y+ LID++
Sbjct: 331 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 390
Query: 383 AGRWESARIVLKEMEVSHA-KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
AG A I +K++ VS S Y+ ++ GY G+ ++LKEM S G
Sbjct: 391 AGSLNKA-IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG------ 443
Query: 442 FYNVMIDTFGKYNCLHHAMAAFD-------RMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+NV +F CL + FD ML + P TLI K G++ +A
Sbjct: 444 -FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 502
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
EL+ + +G+ T T N +++ L E + ++ R+ + +G + + V+Y TL+
Sbjct: 503 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
+ D+A L+ + + GLKP N + LI + EA
Sbjct: 563 CCGKKKLDEAFMFLDEMVKR-----------GLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
K NG+ PDV TY+ ++ + ++
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAER 638
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 212/494 (42%), Gaps = 34/494 (6%)
Query: 165 LYSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISA---CARNDDLEKALNLM 216
L++ I+A + K+ EA L + + P +T+N +I C R D+ A
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE---AFMFK 331
Query: 217 SKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA 276
KM + G I YS++++ LTR +I + + KE+ + + N++I F
Sbjct: 332 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYF--VLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
+AG +KA+ + GLS ++TY +I +G+ AE + +E+ G
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA-----RI 391
++ +++ A V EM + P + LI G+ A +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ K V N+ +L G + G+ F++ KE+ G D YN +I
Sbjct: 510 LNKGFVVDTRTSNA-----LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 564
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
L A D M+ G++PD T++ LI F + + A + +++ + G P
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 624
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
TY++MI+ + ER E+ + M ++ + PN V Y L+ Y +SGR A+E E
Sbjct: 625 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED- 683
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
M+ G+ P++ SLI R EA + + M+ GL+P+V YT
Sbjct: 684 ----------MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 733
Query: 632 LMKALIRVDKFHKV 645
L+ ++ + KV
Sbjct: 734 LIDGYGKLGQMVKV 747
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 12/352 (3%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
G+ P T ++T+L + + F+ + + G+ P + + + K G +++A
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ S+ME +GV P+ T++ +ID GR++ A + ++M +P YS ++ G
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+ VLKEM G P+ YN +ID+F + L+ A+ D M+S+G+
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ T+NTLI + K G+ D AE L +EM G+ ++ +I LL ++ R +G
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M + + P TTL+ + G+ A+E L Q +N V+ T + SN L
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALE----LWFQFLNKGFVVDT---RTSNALL 525
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
+ L A D EAF + + + G D V+Y TL+ K + F
Sbjct: 526 HGLCEAGKLD----EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 573
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 128 LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYS-ILIHALGRSEKLYEAF--- 183
L +L+ LC + A+ W Q N + + S L+H L + KL EAF
Sbjct: 485 LLTTLISGLCKHGKH---SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 184 --LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRT 241
+L + + ++YN LIS C L++A + +M + G D YS++I L
Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 601
Query: 242 NKIDSSLL---------------------------------QKLYKEIECDKIELDGQLL 268
NK++ ++ Q+ + E+ ++ + +
Sbjct: 602 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N +I + ++G S A+ + G+SP +ATY ++I +S R EA+ +FEE++
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
GL+P Y AL+ GY K+G + E ++ EM V P++ TY+++I YA G
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
A +L EM P+S Y + GY +G F+
Sbjct: 782 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 528 DVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGL 587
DV +L N +G+ P+ T L+ ++ F E AF V+ G+
Sbjct: 225 DVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCE-----------AFDVV-CKGV 269
Query: 588 KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
P + INAF + + EA + M+E G+ P+VVT+ T++ L ++ + F
Sbjct: 270 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 328
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 246/524 (46%), Gaps = 24/524 (4%)
Query: 132 LLKNLCSSN----SSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA---FL 184
+L N+C + +D+A+ ++ + L E+ Y+ +I L ++ +L EA F
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 185 LSQRQRLTPLTY--NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTN 242
++ R P TY N +I ++A +L+ + R G I Y+ ++ L +
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 243 KIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
K+D +L K+++E++ D + N +I +AG A Q GL P T
Sbjct: 358 KVDEAL--KVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
++ L S + EA A+FEE+ P + +L+ G K+G + DA V +M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
S + Y+ LI + N GR E + K+M + P+ + + + GE +
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
+ + +E+K+ PD Y+++I K + F M +G DT +N +I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
D KCG+ ++A +L EEM+ +G+ P TY +I+ L + +R ++ L +++ +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
NVV Y++L+D +G+ GR D+A LE L + GL P+ NSL++A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK-----------GLTPNLYTWNSLLDALV 703
Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
+ + EA Q MKE P+ VTY L+ L +V KF+K F
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/550 (22%), Positives = 251/550 (45%), Gaps = 34/550 (6%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ S++ LC +N +D A + L+K N Y+ +I G + K EA+ L +R
Sbjct: 276 YTSMIGVLCKANR-LDEAVEMFEHLEK-NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 189 QRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
QR + + YN +++ + +++AL + +M++D + Y+++I L R K
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGK 392
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+D++ +L ++ + + + +N ++ K+ +A +P T+
Sbjct: 393 LDTAF--ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L GR +A V+E++ +S + + Y +L+K + G +D + +M
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
PD + +D AG E R + +E++ P++ YS ++ G G
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
T+++ MK G DT YN++ID F K ++ A + M ++G EP +T+ ++ID
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K R D A LFEE + + Y+ +I+ G+ R ++ +L + +GL P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSD------------------------QAVNAF 579
N+ T+ +L+D ++ ++A+ C + + + +A +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRV 639
+ M+ G+KPS ++ ++I+ + AEA A+ K NG PD Y +++ L
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 640 DKFHKVFSSY 649
++ FS +
Sbjct: 811 NRAMDAFSLF 820
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 211/463 (45%), Gaps = 12/463 (2%)
Query: 115 FKLAESYRAVPAP---LWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIH 171
K+ E + AP ++ L+ LC + +D A+ + +QK L + +I++
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGL-FPNVRTVNIMVD 420
Query: 172 ALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHC 226
L +S+KL EA + + + TP +T+ +LI + ++ A + KM
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 227 DFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR 286
+ I Y+ +I++ + + K+YK++ D QLLN + KAG+ K
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDG--HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
+ P +Y+ +I L +G E +F +KE G T+AYN ++ G+
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
K G + A ++ EM+ G P TY +ID A R + A ++ +E + + N
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
IYS ++ G+ G + +L+E+ G+ P+ + +N ++D K ++ A+ F M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
P+ +T+ LI+ K ++++A ++EMQ++G P T +Y MI+ L +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+ L +A G +P+ Y +++ R DA E
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 26/357 (7%)
Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
+ + E+ +G P ++ G VK L++ VV M + P Y+ LI A
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
++ + + ++M+ +P +++ ++ G+ G +L EMKSS ++ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
YNV ID+FGK + A F + + G++PD +T+ ++I K R D A E+FE
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
+++ PCT YN MI G ++++ LL RA+G +P+V+ Y ++ + G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 560 RFDDAIE-----------------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNS 596
+ D+A++ C G D A M+ GL P+ +N
Sbjct: 358 KVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL---IRVDKFHKVFSSYL 650
+++ + Q+ EA A+ + M PD +T+ +L+ L RVD +KV+ L
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 179/384 (46%), Gaps = 15/384 (3%)
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
++++G KA + + M + P + Y +I A S + +F++++E
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G +P + L++G+ K G + A ++ EM+ S + D Y++ ID++ G+ + A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
E+E + KP+ Y+ ++ ++ + ++ + P T+ YN MI
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+G A + +R ++G P I +N ++ C K G+ D A ++FEEM++ P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 376
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+TYNI+I++L + + L +M+ GL PNV T +VD +S + D+A E
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
+ + P + SLI+ G+ R +A+ V + M ++ + + + Y
Sbjct: 437 EMDYKVCT-----------PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 630 TTLMKALI---RVDKFHKVFSSYL 650
T+L+K R + HK++ +
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMI 509
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 183/403 (45%), Gaps = 8/403 (1%)
Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
+D AY V + + C + ++Y+ LI GR E ++ + Q +P N
Sbjct: 463 VDDAYKVYEKMLDSD-CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
+ + + EK + +++ + D +YS++I L + + + +L+ ++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY--ELFYSMK 579
Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
LD + N VI GF K G +KA + L + G P TY +VI L+ R
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
EA +FEE K ++ Y++L+ G+ K+G + +A ++ E+ + G+ P+ +T++ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
DA A A + + M+ PN Y ++ G ++ + F +EM+ G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P T Y MI K + A A FDR + G PD+ +N +I+ R A L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
FEE + RG T ++++ L + + E + +R G
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 249/527 (47%), Gaps = 24/527 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAF-LLSQ 187
+S+L N S + LA AV++ + K L Y +++ + L++ ++ +A L+ Q
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMK--LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 188 RQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ T+N LI R++ +A+ L+ +M G D + Y +V+ L +
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID +L L K++E KIE + N +I + + A+ G+ P TY
Sbjct: 237 IDLAL--SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I L N GR +A + ++ E + P ++AL+ +VK G L +AE + EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T Y +I F + +A F +M+S+G+ PD +T++ L+D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
G+ + A +FE +Q P TYNIMI + + + ED L ++ +G+ P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NVVTYTT++ + C +GL ++A FR M+ +G P + N+LI A
Sbjct: 535 NVVTYTTMMSGF-----------CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK-FHKVFS 647
D A + +++ M+ D T + L R+DK F K+ S
Sbjct: 584 DGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 215/468 (45%), Gaps = 26/468 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TY+ LI+ R L AL +++KM + GY D + + ++ N+I ++ L
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV--SLVG 175
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++ + D N +I G + AS+A+ + G P TY V+ L G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
A ++ +++++ ++P YN ++ + DA + +EM+ G+ P+ TY+
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LI N GRW A +L +M PN +S ++ + G+ ++ EM
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
++PD Y+ +I+ F ++ L A F+ M+S+ P+ +T+NTLI K R D
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
ELF EM +RG T TY +I+ + ++ + + M + G+LP+++TY+ L+D
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 555 YGQSGRFDDAI------------------------ECLEGLSDQAVNAFRVMRTDGLKPS 590
+G+ + A+ C G + + F + G+KP+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ ++++ F EA A+ + MKE G PD TY TL++A +R
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 202/449 (44%), Gaps = 13/449 (2%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A+NL M + + +S ++ ++ + NK D L+ L ++++ I +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 119
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
+ +I F + S A+ L +G P T +++ + R +A ++ ++ E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
G +P + +N L+ G + +A +V M G PD TY ++++ G +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +LK+ME +P IY+ I+ + + EM + G+ P+ YN +I
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ I P+ +T++ LID K G+ AE+L++EM +R P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TY+ +IN +R ++ K + M ++ PNVVTY TL+ + ++ R D+ +E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME-- 417
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + + +LI+ F + + A V + M +G+ PD++T
Sbjct: 418 ---------LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 629 YTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
Y+ L+ L K + + KM
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKM 497
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A LF +M + FP ++ +++ + + +++ V L M+ G+ N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
L++ + + + A+ L ++M+ G +P + LNSL+N F R ++
Sbjct: 121 ILINCFCRRSQLSLALAVLA----------KMMKL-GYEPDIVTLNSLLNGFCHGNRISD 169
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIR 638
A +++ M E G +PD T+ TL+ L R
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 208/415 (50%), Gaps = 14/415 (3%)
Query: 226 CDFINYSLVIQSLTRTNKIDSSL-LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
C + + +I+ L N+ D ++ + + E K E G+L + +I + G + A
Sbjct: 194 CGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNE-QGKLASAMISTLGRYGKVTIA 252
Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
R A G ++A+I+A SG EA +VF +KE GL+P YNA++
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 345 YVKMGY-LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKP 403
K G K EM+R+GV PD T++ L+ + G WE+AR + EM +
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 404 NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF 463
+ F Y+ +L G+ F++L +M + P+ Y+ +ID F K A+ F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQ 523
M GI D +++NTL+ + K GR + A ++ EM G TYN ++ G+Q
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 524 ERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMR 583
++++VK++ M+ + +LPN++TY+TL+D Y + G + +A+E FR +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI-----------FREFK 541
Query: 584 TDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ GL+ + ++LI+A ++ A +++ M + G+ P+VVTY +++ A R
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 37/437 (8%)
Query: 166 YSILIHALGRS---EKLYEAFLLSQRQRLTP--LTYNALISACARND-DLEKALNLMSKM 219
+S LI A GRS E+ F + L P +TYNA+I AC + + ++ +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+++G D I ++ ++ +R +++ + L+ E+ +IE D N ++ K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAA--RNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A L + P +Y+ VI + +GR EA +F E++ G+ +YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
LL Y K+G ++A ++ EM G+ D TY+ L+ Y G+++ + V EM+
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
H PN YS ++ GY G ++ ++ +E KS+G+ D Y+ +ID K + A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT--------- 510
++ D M EGI P+ +T+N++ID + DR+ + G P +
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----SNGGSLPFSSSALSALTE 624
Query: 511 TTYNIMINLLGE-------------QERWEDVKRLLGNMRAQGLL---PNVVTYTTLVDI 554
T N +I L G+ +E +++ +L R L PNVVT++ +++
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 555 YGQSGRFDDAIECLEGL 571
+ F+DA LE L
Sbjct: 685 CSRCNSFEDASMLLEEL 701
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 222/504 (44%), Gaps = 73/504 (14%)
Query: 165 LYSILIHALGR------SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
L S +I LGR +++++E T ++ALISA R+ E+A+++ +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGN-TVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M++ G + + Y+ VI + C K ++ +
Sbjct: 294 MKEYGLRPNLVTYNAVIDA--------------------CGKGGMEFK------------ 321
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
+ +F Q G+ P T+ +++ S G A +F+E+ ++ +Y
Sbjct: 322 ----QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
N LL K G + A ++++M ++P+ +YS +ID +A AGR++ A + EM
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
+ Y+ +L+ Y G + +L+EM S G++ D YN ++ +GK
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
F M E + P+ +T++TLID + K G Y A E+F E + G Y+ +I+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEG----LSDQ 574
L + L+ M +G+ PNVVTY +++D +G+S D + + G S
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 575 AVNAFRVMRTDGLKPSNLALNSLINAFGE--------DQRDAEA--------FAVLQYMK 618
A++A + T+G N +I FG+ +D E V + M
Sbjct: 618 ALSA--LTETEG--------NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMH 667
Query: 619 ENGLKPDVVTYTTLMKALIRVDKF 642
+ +KP+VVT++ ++ A R + F
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSF 691
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 384 GRWESARIVLKEMEVSHAKP---NSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDT 440
GR+ I + E + A + +S +++ Y G + V MK G+ P+
Sbjct: 244 GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL 303
Query: 441 HFYNVMIDTFGKYNCLHHAMAAF-DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
YN +ID GK +A F D M G++PD IT+N+L+ + G ++ A LF+
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
EM R +YN +++ + + + + +L M + ++PNVV+Y+T++D + ++G
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
RFD+A+ N F MR G+ ++ N+L++ + + R EA +L+ M
Sbjct: 424 RFDEAL-----------NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 620 NGLKPDVVTYTTLMKALIRVDKFHKV 645
G+K DVVTY L+ + K+ +V
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEV 498
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 203/474 (42%), Gaps = 71/474 (14%)
Query: 166 YSILIHALGRS----EKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
Y+ +I A G+ +++ + F QR + P +T+N+L++ C+R E A NL +M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
D +Y+ ++ ++ + ++D L ++ ++ +I + + VI GFAKAG
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMD--LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
+A+ G + +G++ +Y +++ + GR+ EA + E+ G+K YN
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
ALL GY K G + + V +EM+R VLP+ TYS LID Y+ G ++ A + +E + +
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM------------- 446
+ + +YS ++ G ++ EM G+ P+ YN +
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Query: 447 ---------------------------IDTFGKY----------NC------LHHAMAAF 463
I FG+ +C L + F
Sbjct: 604 ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVF 663
Query: 464 DRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL-GE 522
+M I+P+ +T++ +++ +C ++ A L EE++ Y ++ LL G+
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR----LFDNKVYGVVHGLLMGQ 719
Query: 523 QER-WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA-IECLEGLSDQ 574
+E W + L + Y L D+ G+ A + LEG S Q
Sbjct: 720 RENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQ 773
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
+ MI T G+Y + A F+ + G ++ LI + + G ++ A +F M+E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 504 RGYFPCTTTYNIMINLLGEQE-RWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
G P TYN +I+ G+ ++ V + M+ G+ P+ +T+ +L+ + + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG--- 353
Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
L + A N F M ++ + N+L++A + + AF +L M +
Sbjct: 354 --------LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
P+VV+Y+T++ + +F + N++ + Y G
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEA------LNLFGEMRYLG 439
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 50/496 (10%)
Query: 191 LTPL--TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL 248
L PL TY+ LI + LE A +L+ +M G D YSL+I L + D++
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA- 331
Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA------- 301
+ L E+ I + + + I +K G KA GL P+
Sbjct: 332 -KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 302 ----------------------------TYAAVITALSNSGRTIEAEAVFEELKESGLKP 333
TY V+ + +SG A + +E+ SG +P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
Y L+K +++ DA V+ EM+ G+ PD Y+ LI + A R + AR L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
EM + KPN+F Y ++GY + E+ + +KEM+ GV P+ +I+ + K
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
+ A +A+ M+ +GI D T+ L++ FK + D AEE+F EM+ +G P +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
++IN + + + M +GL PNV+ Y L+ + +SG + A E L+ +S
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS- 689
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
GL P+ + ++I+ + + AEAF + MK GL PD YTTL+
Sbjct: 690 ----------VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 634 KALIRVDKFHKVFSSY 649
R++ + + +
Sbjct: 740 DGCCRLNDVERAITIF 755
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 231/517 (44%), Gaps = 58/517 (11%)
Query: 166 YSILIHALGRSEKLYEAF--LLSQRQR---LTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+ LI R + + + + L+ ++R ++P TY ++ + DL+ A N++ +M
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
G + + Y+ +I++ + ++ ++ ++ KE++ I D N +I+G +KA
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAM--RVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVI-------------------------------TA 309
+A FL GL P TY A I T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 310 LSN----SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
L N G+ IEA + + + + G+ K Y L+ G K + DAE + EM G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTF 425
+ PD +Y +LI+ ++ G + A + EM PN IY+ +L G+ GE ++
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++L EM G+ P+ Y +ID + K L A FD M +G+ PD+ + TL+D
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL---GEQE-RWEDVKRLLGNMRAQGL 541
+ +RA +F ++G T +N +IN + G+ E + E + RL+ +
Sbjct: 743 CRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
PN VTY ++D C EG + A F M+ L P+ + SL+N +
Sbjct: 802 KPNDVTYNIMIDYL-----------CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ R AE F V G++PD + Y+ ++ A ++
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 238/551 (43%), Gaps = 59/551 (10%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
+ +++K +CSS +D AY +V + C ++Y+ LI ++ + +A +
Sbjct: 420 YGTVVKGMCSS-GDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ Q + P YN+LI ++ +++A + + +M ++G + Y I ++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 244 IDSSLLQKLYKEI-ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
S+ K KE+ EC + + L +I + K G +A G+ T
Sbjct: 538 FASA--DKYVKEMRECGVLP-NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
Y ++ L + + +AE +F E++ G+ P +Y L+ G+ K+G ++ A + EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G+ P+ Y++L+ + +G E A+ +L EM V PN+ Y I+ GY G+
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAF------------------- 463
F++ EMK G+ PD+ Y ++D + N + A+ F
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 464 ---------------DRMLSEGIE----PDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+R++ + P+ +T+N +ID K G + A+ELF +MQ
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
P TY ++N + R ++ + A G+ P+ + Y+ +++ + + G A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 565 IECLEGLSDQ--AVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
+ L DQ A NA DG K S +L++ F + A V++ M
Sbjct: 895 LV----LVDQMFAKNAV----DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946
Query: 623 KPDVVTYTTLM 633
PD T L+
Sbjct: 947 IPDSATVIELI 957
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 11/347 (3%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GL P TY +I L R +A+++ E+ G+ Y+ L+ G +K A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ +V EM G+ + Y I + G E A+ + M S P + Y+ ++ G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
Y ++ +++L EMK + + Y ++ L A M++ G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ + TLI + R+ A + +EM+E+G P YN +I L + +R ++ + L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M GL PN TY + Y ++ F A D+ V + MR G+ P+ +
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASA--------DKYV---KEMRECGVLPNKVLC 560
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
LIN + + + EA + + M + G+ D TYT LM L + DK
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 47/368 (12%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TY L++ +ND ++ A + +MR G D +Y ++I ++ + + ++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA--SSIFD 651
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E+ + + + + N ++ GF ++G+ KA L GL P TY +I SG
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA-------------------- 354
EA +F+E+K GL P + Y L+ G ++ ++ A
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA 771
Query: 355 ------EFVVSEMERSGVL-------------PDEHTYSLLIDAYANAGRWESARIVLKE 395
+F +E+ ++ VL P++ TY+++ID G E+A+ + +
Sbjct: 772 LINWVFKFGKTEL-KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
M+ ++ P Y+ +L GY G F V E ++G+EPD Y+V+I+ F K
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 456 LHHAMAAFDRMLS-----EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCT 510
A+ D+M + +G + T L+ K G + AE++ E M Y P +
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 511 TTYNIMIN 518
T +IN
Sbjct: 951 ATVIELIN 958
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 138/369 (37%), Gaps = 42/369 (11%)
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
VG S + + G EA VF L PR LL ++ L
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL--KEMEVSHAKPNSFIYSRI 411
V M V+ D TY +LI A+ AG + + VL E E A N
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNV------ 258
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
++ + M G+ P + Y+V+ID K L A + M S G+
Sbjct: 259 ----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
D T++ LID K D A+ L EM G Y+ I ++ ++ E K
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------C 567
L M A GL+P Y +L++ Y + E C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
G D A N + M G +P+ + +LI F ++ R +A VL+ MKE G+ PD+
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 628 TYTTLMKAL 636
Y +L+ L
Sbjct: 489 CYNSLIIGL 497
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 225/502 (44%), Gaps = 31/502 (6%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220
+S L+ A+ + +K ++ + + TYN +I+ R L AL ++ KM
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ GY + + ++ N+I ++ L ++ + D ++ G +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAV--ALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
AS+A+ + G P TY AVI L G A + ++++ ++ Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
++ K ++ DA + +EM+ G+ PD TYS LI N GRW A +L +M
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
PN ++ ++ + G+ ++ EM ++P+ YN +I+ F ++ L A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
F M+S+ PD +T+NTLI+ K + ELF +M RG T TY +I+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI--------------- 565
+ ++ + + M + G+ PN++TY TL+D ++G+ + A+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 566 ---------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
C G + + F + G+KP +A N++I+ F + EA+ +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 617 MKENGLKPDVVTYTTLMKALIR 638
MKE+G PD TY TL++A +R
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLR 567
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 217/448 (48%), Gaps = 17/448 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
++ L+SA A+ + ++ KM G + Y+++I L R +++ +L L K+
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN GF S+A+ + +G P T T+ ++ L
Sbjct: 128 KLGYGPSIVTLNSLLN----GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ E + G +P Y A++ G K G A ++++ME+ + D Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S +ID+ + A + EM+ +P+ F YS +++ + G W ++L +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A FD M+ I+P+ +T+N+LI+ R D
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++F M + P TYN +IN + ++ D L +M +GL+ N VTYTTL
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL-- 421
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M +DG+ P+ + N+L++ ++ + +A V
Sbjct: 422 IHG----FFQASDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
+Y++++ ++PD+ TY + + + + K
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 244/527 (46%), Gaps = 60/527 (11%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+SLL C N I A A+V Q + Y + + ++ L+H L + K EA L +R
Sbjct: 139 NSLLNGFCHGNR-ISEAVALVD--QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 189 QRLTP-----LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ +TY A+I+ + + + ALNL++KM + D + YS VI SL +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+D +L L+ E++ I D + +I G S A R L ++P T+
Sbjct: 256 VDDAL--NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I A + G+ IEAE +F+E+ + + P YN+L+ G+ L +A+ + + M
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
LPD TY+ LI+ + A + V+ ME+ +RD
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKK------VVDGMEL----------------FRD------ 405
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
M G+ +T Y +I F + + +A F +M+S+G+ P+ +T+NTL+D
Sbjct: 406 -------MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q+ P TYNIM + + + ED L ++ +G+ P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
+V+ Y T++ + C +GL ++A F M+ DG P + N+LI A
Sbjct: 519 DVIAYNTMISGF-----------CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI--RVDK-FHKVFS 647
D A + +++ M+ D TY + L R+DK F +V S
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 211/471 (44%), Gaps = 17/471 (3%)
Query: 191 LTPLTYNALISACARND----DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
+ L+Y+ +RN L++A++L +M + + +S ++ ++ + K D
Sbjct: 24 FSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD- 82
Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
L+ +++E + + N +I + S A+ LG +G P T ++
Sbjct: 83 -LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL 141
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
+ + R EA A+ +++ E G +P T + L+ G + +A +V M G
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
PD TY +I+ G + A +L +ME + + IYS ++
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
+ EM + G+ PD Y+ +I Y A ML I P+ +T+N+LID
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
K G+ AE+LF+EM +R P TYN +IN +R ++ +++ M ++ LP+VV
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
TY TL++ + ++ + D +E FR M GL + + +LI+ F +
Sbjct: 382 TYNTLINGFCKAKKVVDGME-----------LFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKM 657
A V + M +G+ P+++TY TL+ L + K K + + KM
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 183/397 (46%), Gaps = 9/397 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
+ +++ LC DLA +++ ++K + + ++YS +I +L + + +A L
Sbjct: 208 YGAVINGLCKRGEP-DLALNLLNKMEKGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R TY++LIS A L+S M + + + + ++ +I + + K
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + +KL+ E+ I+ + N +I GF +A + + P TY
Sbjct: 326 LIEA--EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+I + + ++ +F ++ GL T Y L+ G+ + +A+ V +M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GV P+ TY+ L+D G+ E A +V + ++ S +P+ + Y+ + G G+ +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+PD YN MI F K A F +M +G PD+ T+NTLI
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
H + G + EL +EM+ + +TY ++ ++L
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 212/448 (47%), Gaps = 17/448 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + ++L KM++ G + Y+++I R ++I +L L K+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN G+ S A+ + +G P T T+ +I L
Sbjct: 73 KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ + + + G +P Y ++ G K G + A ++++ME + + D +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID+ + A + KEME +PN YS +++ G W Q+L +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K A D M+ I+PD T+N+LI+ R D+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++FE M + FP TYN +I + +R ED L M +GL+ + VTYTTL+
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI- 367
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
G F D G D A F+ M +DG+ P + + L++ + + +A V
Sbjct: 368 ----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
YM+++ +K D+ YTT+++ + + K
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 244/528 (46%), Gaps = 31/528 (5%)
Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQK----HNLCYSYELLYSILIHALGRSE 177
R +P+ + L + + DL ++ +Q+ HNL Y+Y +ILI+ R
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL-YTY----NILINCFCRRS 59
Query: 178 KLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
++ A LL + +L + +T ++L++ + A+ L+ +M + GY D I ++
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 233 LVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290
+I L NK + L+ ++ + + G ++N G K GD A L
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN----GLCKRGDIDLAFNLLNK 175
Query: 291 AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350
+ + + +I +L +A +F+E++ G++P Y++L+ G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
DA ++S+M + P+ T++ LIDA+ G++ A + +M P+ F Y+
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ G+ + Q+ + M S PD YN +I F K + F M G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+ DT+T+ TLI F G D A+++F++M G P TY+I+++ L + E
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
+ M+ + ++ YTT+++ ++G+ DD + LS G+KP+
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-----------LKGVKPN 464
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ N++I+ + EA+A+L+ MKE+G PD TY TL++A +R
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 233/496 (46%), Gaps = 23/496 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID + L ++E KIE D + N +I K A+ + G+ P TY
Sbjct: 166 IDLAF--NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L + GR +A + ++ E + P +NAL+ +VK G +AE + +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TY+ LI+ + R + A+ + + M P+ Y+ ++ G+ +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMID-TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
++ +EM G+ DT Y +I F +C +A F +M+S+G+ PD +T++ L+
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC-DNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
D G+ ++A E+F+ MQ+ Y MI + + + +D L ++ +G+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
PNVVTY T++ SG C + L +A + M+ DG P + N+LI A
Sbjct: 463 PNVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 603 EDQRDAEAFAVLQYMK 618
D A + +++ M+
Sbjct: 512 RDGDKAASAELIREMR 527
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 179/401 (44%), Gaps = 8/401 (1%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFL 184
P + + ++ N IDLA+ +++ ++ + + ++++ +I +L + + +A
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-EADVVIFNTIIDSLCKYRHVDDALN 206
Query: 185 L-----SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L ++ R +TY++LIS A L+S M + + + + ++ +I +
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
+ K + +KL+ ++ I+ D N +I GF KA + P
Sbjct: 267 KEGKFVEA--EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
TY +I S R + +F E+ GL T Y L++G G +A+ V
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
+M GV PD TYS+L+D N G+ E A V M+ S K + +IY+ ++ G G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWN 479
+ + + + GV+P+ YN MI L A A +M +G PD+ T+N
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 480 TLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
TLI H + G + EL EM+ + +T ++ N+L
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 20/320 (6%)
Query: 333 PRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESA 389
P +N LL KM K + V+S +M+R G+ + +TY++LI+ + + A
Sbjct: 8 PSIFEFNKLLSAIAKM---KKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L +M +P+ S +L GY ++ +M G PDT + +I
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
+N A+A DRM+ G +P+ +T+ +++ K G D A L +M+
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+N +I+ L + +D L M +G+ PNVVTY++L+ GR+ DA + L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
+ ++ +N P+ + N+LI+AF ++ + EA + M + + PD+ TY
Sbjct: 245 DMIEKKIN-----------PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 630 TTLMKALI---RVDKFHKVF 646
+L+ R+DK ++F
Sbjct: 294 NSLINGFCMHDRLDKAKQMF 313
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 11/282 (3%)
Query: 361 MERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGE 420
M +S LP ++ L+ A A +++ + ++M+ N + Y+ ++ + R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 421 WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480
+L +M G EP + +++ + + A+A D+M+ G PDTIT+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 481 LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540
LI F + A L + M +RG P TY +++N L ++ + LL M A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 541 LLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA 600
+ +VV + T++D + DDA+ N F+ M T G++P+ + +SLI+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDAL-----------NLFKEMETKGIRPNVVTYSSLISC 229
Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
R ++A +L M E + P++VT+ L+ A ++ KF
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 215/468 (45%), Gaps = 19/468 (4%)
Query: 166 YSILIHALGRSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
Y++ I L + +L A L+ Q + +TYN LI +N ++A + KM
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+G D Y+ +I + + L +++ + + D +I G G+
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMV--QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
++A+ A G G+ P Y +I LSN G +EA + E+ E GL P + +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G KMG + DA+ +V M G PD T+++LI Y+ + E+A +L M +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P+ + Y+ +L G +++ + K M G P+ +N+++++ +Y L A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT-TYNIMINL 519
+ M ++ + PD +T+ TLID K G D A LF +M+E +T TYNI+I+
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAF 579
E+ ++L M + L P+ TY +VD + ++G + + L
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL----------- 660
Query: 580 RVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
M +G PS L +IN + R EA ++ M + GL P+ V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 220/474 (46%), Gaps = 18/474 (3%)
Query: 174 GRSEKLYEAFLLSQRQRL-----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF 228
GR K+ EA + +R T +YNA++S + ++A + +MR G D
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
++++ ++S +T++ ++L +L + E++ V+ GF + ++
Sbjct: 147 YSFTIRMKSFCKTSRPHAAL--RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
G G+S +T+ ++ L G E E + +++ + G+ P YN ++G +
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 349 GYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIY 408
G L A +V + G PD TY+ LI +++ A + L +M +P+S+ Y
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
+ ++AGY G Q +++ + +G PD Y +ID + A+A F+ L
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
+GI+P+ I +NTLI G A +L EM E+G P T+NI++N L + D
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLK 588
L+ M ++G P++ T+ L+ Y + ++A+E L+ VM +G+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD-----------VMLDNGVD 493
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
P NSL+N + + + + M E G P++ T+ L+++L R K
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 198/442 (44%), Gaps = 50/442 (11%)
Query: 180 YEAF--LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
YE F +L+ L T+N L+ + D+++ L+ K+ + G + Y+L IQ
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
L C + ELDG A+R +G G
Sbjct: 261 L-------------------CQRGELDG------------------AVRMVGCLIEQGPK 283
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P TY +I L + + EAE ++ GL+P + YN L+ GY K G ++ AE +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
V + +G +PD+ TY LID + G A + E KPN +Y+ ++ G +
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+G Q+ EM G+ P+ +N++++ K C+ A M+S+G PD T
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+N LI + + + A E+ + M + G P TYN ++N L + ++EDV M
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+G PN+ T+ L++ + + D+A+ LE + +++VN P + +L
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN-----------PDAVTFGTL 572
Query: 598 INAFGEDQRDAEAFAVLQYMKE 619
I+ F ++ A+ + + M+E
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEE 594
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 30/393 (7%)
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
M + VG Y + G+ EA VFE + +P +YNA++ V G
Sbjct: 66 MRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSG 125
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
Y A V M G+ PD +++++ + ++ R +A +L M + N Y
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
++ G+ + +++ +M +SGV +N ++ K + D+++
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
G+ P+ T+N I + G D A + + E+G P TYN +I L + ++++
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD-------DAI----------------- 565
+ LG M +GL P+ TY TL+ Y + G DA+
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 566 ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
C EG +++A+ F G+KP+ + N+LI EA + M E GL P+
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 626 VVTYTTLMKALIRV------DKFHKVFSSYLFF 652
V T+ L+ L ++ D KV S +F
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 18/348 (5%)
Query: 293 GVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYL 351
G L PK T AVI + + +E +F + KE G K Y ++++ G
Sbjct: 2 GPPLLPKHVT--AVIKCQKDPMKALE---MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKF 56
Query: 352 KDAEFVVSEM-ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
+ E V+ +M E G E Y + Y G+ + A V + M+ +P F Y+
Sbjct: 57 EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNA 116
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
I++ D G + + +V M+ G+ PD + + + + +F K + H A+ + M S+G
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
E + + + T++ ++ ELF +M G C +T+N ++ +L ++ ++ +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
+LL + +G+LPN+ TY + Q G D A+ + L +Q G KP
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ-----------GPKPD 285
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ N+LI ++ + EA L M GL+PD TY TL+ +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 493 RAEELFEEM-QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR---AQGLLPNVVTY 548
+A E+F M +E G+ +TY +I LG ++E ++ +L +MR +L V Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--Y 79
Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
+ YG+ G+ +AVN F M +P+ + N++++ +
Sbjct: 80 VGAMKNYGRKGKVQ-----------EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFH 643
+A V M++ G+ PDV ++T MK+ + + H
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPH 163
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 223/495 (45%), Gaps = 41/495 (8%)
Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
+R L ++N LI L +L+ K+ + G+ D + ++ ++ L ++I
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 247 SL--LQKLYKEIECDKIELDGQLL-----------NDVIVGFAKAGDASKAMRFLGMAQG 293
+L + + + + L Q++ N +I G G +A + G
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 294 VGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKD 353
GL TY ++ + G T A + +++E+ +KP Y+A++ K G+ D
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD 314
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A+++ SEM G+ P+ TY+ +ID + + GRW A+ +L++M P+ ++ +++
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
G+ ++ EM + PDT YN MI F K+N A FD M S P
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----P 430
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
D +T+NT+ID + + R D +L E+ RG TTTYN +I+ E + + L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS--------------------- 572
M + G+ P+ +T L+ + ++ + ++A+E E +
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 573 ---DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
D+A + F + G++P N +I+ F ++A + MK+NG +PD TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 630 TTLMKALIRVDKFHK 644
TL++ ++ + K
Sbjct: 611 NTLIRGCLKAGEIDK 625
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 209/462 (45%), Gaps = 48/462 (10%)
Query: 229 INYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFL 288
++ + VI R N+ D ++ LY+++E +I L+ N +I F S ++
Sbjct: 107 VDCNKVIGVFVRMNRPDVAI--SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 289 GMAQGVGLSPKTATYAAVITALSNSGRT---------------IEAEAVFEELKESGLKP 333
G +G P T+ ++ L R +EA A+F+++ E GL P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 334 RTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVL 393
+N L+ G G + +A +V++M G+ D TY +++ G +SA +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 394 KEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY 453
+ME +H KP+ IYS I+ G + EM G+ P+ YN MID F +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 454 NCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTY 513
A M+ I PD +T+N LI K G+ AE+L +EM R FP T TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 514 NIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSD 573
N MI + R++D K + M + P+VVT+ T++D+Y ++ R D+ ++ L +S
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 574 QAVNA------------------------FRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
+ + A F+ M + G+ P + N L+ F E+++ E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVFSS 648
A + + ++ + + D V Y ++ + +VD+ +F S
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 248/552 (44%), Gaps = 44/552 (7%)
Query: 122 RAVPAPLW--HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEK 178
R +P ++ + L+K C + L++++ ++ + L + +++ ++ L+H L ++
Sbjct: 135 RRIPLNIYSFNILIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 179 LYEAF----------------LLSQRQR--LTP--LTYNALISACARNDDLEKALNLMSK 218
+ EA L Q LTP +T+N LI+ + +A L++K
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M G H D + Y ++ + + S+L L ++E I+ D + + +I K
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--NLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
G S A G++P TY +I + GR +A+ + ++ E + P +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
NAL+ VK G L +AE + EM + PD TY+ +I + R++ A+ + M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-- 427
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
A P+ ++ I+ Y Q+L+E+ G+ +T YN +I F + + L+
Sbjct: 428 --ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
A F M+S G+ PDTIT N L+ + + + A ELFE +Q T YNI+I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
+ + + ++ L ++ G+ P+V TY + I G G+ +SD V
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM--ISGFCGK--------SAISDANV-L 594
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
F M+ +G +P N N+LI + ++ ++ M+ NG D T ++ LI
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT-IKMVADLIT 653
Query: 639 VDKFHKVFSSYL 650
+ K FS L
Sbjct: 654 DGRLDKSFSDML 665
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 48/441 (10%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
YNALI+ + + ++ A ++ +MR + D + Y+++I SL K+D +L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL------- 213
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
++ QLL+D P TY +I A G
Sbjct: 214 ------KVLNQLLSD------------------------NCQPTVITYTILIEATMLEGG 243
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EA + +E+ GLKP YN +++G K G + A +V +E G PD +Y++
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
L+ A N G+WE ++ +M PN YS ++ G+ + +LK MK G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ PD + Y+ +I F + L A+ + M+S+G PD + +NT++ K G+ D+A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
E+F ++ E G P +++YN M + L ++ M + G+ P+ +TY +++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
C EG+ D+A MR+ PS + N ++ F + R +A VL+
Sbjct: 484 -----------CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 616 YMKENGLKPDVVTYTTLMKAL 636
M NG +P+ TYT L++ +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGI 553
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 190/406 (46%), Gaps = 7/406 (1%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR---LTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+ LI+ + ++ +A + R R +P +TYN +I + L+ AL +++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
D I Y+++I++ +D +L KL E+ ++ D N +I G K G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+A + + G P +Y ++ AL N G+ E E + ++ P Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ + G +++A ++ M+ G+ PD ++Y LI A+ GR + A L+ M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
P+ Y+ +LA G+ + ++ ++ G P++ YN M A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
M+S GI+PD IT+N++I C + G D A EL +M+ + P TYNI++
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
+ R ED +L +M G PN TYT L++ G +G +A+E
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 174/395 (44%), Gaps = 25/395 (6%)
Query: 276 AKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRT 335
++G+ +++ L G +P +I +A V E L++ G +P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 336 KAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE 395
AYNAL+ G+ KM + DA V+ M PD TY+++I + + G+ + A VL +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 396 MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
+ + +P Y+ ++ G +++ EM S G++PD YN +I K
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
+ A + +G EPD I++N L+ G+++ E+L +M P TY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE--------- 566
+I L + E+ LL M+ +GL P+ +Y L+ + + GR D AIE
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 567 ---------------CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAF 611
C G +DQA+ F + G P++ + N++ +A A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 612 AVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
++ M NG+ PD +TY +++ L R + F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 18/280 (6%)
Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
+G + + +L+ M P+ + ++++ G+ + +V++ ++ G +PD
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
YN +I+ F K N + A DRM S+ PDT+T+N +I G+ D A ++ ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
P TY I+I + ++ +L+ M ++GL P++ TY T+ I G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI--IRGM----- 273
Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
C EG+ D+A R + G +P ++ N L+ A + E ++ M
Sbjct: 274 ----CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYKMLSYSG 662
P+VVTY+ L+ L R K + N+ K++ G
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEA------MNLLKLMKEKG 363
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 11/366 (3%)
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N VI + G +A L + + G +P +Y+ V+ G + + E +K
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
GLKP + Y +++ ++ L +AE SEM R G+LPD Y+ LID + G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A EM P+ Y+ I++G+ G+ ++ EM G+EPD+ + +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
+ K + A + M+ G P+ +T+ TLID K G D A EL EM + G P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TYN ++N L + E+ +L+G A GL + VTYTTL+D Y +SG D A E L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
+ M GL+P+ + N L+N F + +L +M G+ P+ T
Sbjct: 550 -----------KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 629 YTTLMK 634
+ +L+K
Sbjct: 599 FNSLVK 604
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 7/407 (1%)
Query: 165 LYSILIHALGRSEKLYEA---FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKM 219
+Y +I L R KL EA F RQ + P + Y LI + D+ A +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
D + Y+ +I + D KL+ E+ C +E D ++I G+ KAG
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIG--DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A R G SP TY +I L G A + E+ + GL+P YN
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
+++ G K G +++A +V E E +G+ D TY+ L+DAY +G + A+ +LKEM
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
+P ++ ++ G+ G + ++L M + G+ P+ +N ++ + N L A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
A + M S G+ PD T+ L+ H K A LF+EM+ +G+ +TY+++I
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
+++++ + + + MR +GL + + D + R D ++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 217/503 (43%), Gaps = 70/503 (13%)
Query: 166 YSILIH---ALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
Y+I+IH LGR ++ + LL + + TP ++Y+ +++ R +L+K L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G + Y +I L R K+ + ++ + E+ I D + +I GF K GD
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEA--EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
A +F ++P TY A+I+ G +EA +F E+ GL+P + +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ GY K G++KDA V + M ++G P+ TY+ LID G +SA +L EM
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 401 AKPNSFIYSRILAG-----------------------------------YRDRGEWQRTF 425
+PN F Y+ I+ G Y GE +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 426 QVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCH 485
++LKEM G++P +NV+++ F + L + ML++GI P+ T+N+L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 486 FKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
A ++++M RG P TY ++ + ++ L M+ +G +V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 546 VTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQ 605
TY+ L+ + + +F +A E F MR +GL
Sbjct: 667 STYSVLIKGFLKRKKFLEARE-----------VFDQMRREGLAA---------------- 699
Query: 606 RDAEAFAVLQYMKENGLKPDVVT 628
D E F K G +PD +
Sbjct: 700 -DKEIFDFFSDTKYKGKRPDTIV 721
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 203/464 (43%), Gaps = 44/464 (9%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS-------- 246
+YN +I + +++A +L+ M GY D I+YS V+ R ++D
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 247 ----------------SLLQKLYKEIECDK---------IELDGQLLNDVIVGFAKAGDA 281
LL ++ K E ++ I D + +I GF K GD
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
A +F ++P TY A+I+ G +EA +F E+ GL+P + + L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ GY K G++KDA V + M ++G P+ TY+ LID G +SA +L EM
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
+PN F Y+ I+ G G + +++ E +++G+ DT Y ++D + K + A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
ML +G++P +T+N L++ G + E+L M +G P TT+N ++
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
+ + + +M ++G+ P+ TY LV + C +A F+
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH-----------CKARNMKEAWFLFQE 656
Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
M+ G S + LI F + ++ EA V M+ GL D
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 166/384 (43%), Gaps = 30/384 (7%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY-LKD 353
G P+ + L + G EA VFE++ GL + N L K Y
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 354 AEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILA 413
A V E GV + +Y+++I GR + A +L ME+ P+ YS ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 414 GYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEP 473
GY GE + +++++ MK G++P+++ Y +I + L A AF M+ +GI P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLL 533
DT+ + TLID K G A + F EM R P TY +I+ + + +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 534 GNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLE 569
M +GL P+ VT+T L++ Y ++G DA C E
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
G D A M GL+P+ NS++N + EA ++ + GL D VTY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 630 TTLMKALIR---VDKFHKVFSSYL 650
TTLM A + +DK ++ L
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEML 553
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 223/503 (44%), Gaps = 39/503 (7%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQRLTPLTYN-----ALISACARNDDLEKALNLMSKMR 220
+S L + R+++ L ++ L + +N +I+ C R L A + M K+
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ----LLNDVIVGFA 276
+ GY D + +S +I L ++ +L E+ +E+ + LN ++ G
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEAL------ELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 277 KAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTK 336
G S A+ + G P TY V+ + SG+T A + +++E +K
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
Y+ ++ G K G L +A + +EME G D Y+ LI + AGRW+ +L++M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
P+ +S ++ + G+ + ++ KEM G+ PDT Y +ID F K N L
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A D M+S+G P+ T+N LI+ + K D ELF +M RG T TYN +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS---- 572
I E + E K L M ++ + P++V+Y L+D +G + A+E E +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 573 --------------------DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
D A + F + G+KP N +I + +EA
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 613 VLQYMKENGLKPDVVTYTTLMKA 635
+ + M+E+G P+ TY L++A
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRA 571
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 194/427 (45%), Gaps = 13/427 (3%)
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
+ A++L +M + I++S + + RT + D L+ L K++E I + L+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I + S A +G +G P T T++ +I L GR EA + + + E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G KP NAL+ G G + DA ++ M +G P+E TY ++ +G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+L++ME K ++ YS I+ G G F + EM+ G + D Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
F M+ I PD + ++ LIDC K G+ AEEL +EM +RG P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
T TY +I+ ++ + + +L M ++G PN+ T+ L++ Y ++ DD +E
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE--- 408
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
FR M G+ + N+LI F E + A + Q M ++PD+V+Y
Sbjct: 409 --------LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 630 TTLMKAL 636
L+ L
Sbjct: 461 KILLDGL 467
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 46/428 (10%)
Query: 169 LIHALGRSEKLYEAFLLSQRQRLT-----PLTYNALISACARNDDLEKALNLMSKMRQDG 223
L++ L + K+ +A LL R T +TY ++ ++ A+ L+ KM +
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 224 YHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG---D 280
D + YS++I L + +D++ L+ E+E + D + +I GF AG D
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAF--NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 281 ASKAMRFL---------------------------------GMAQGVGLSPKTATYAAVI 307
+K +R + M Q G+SP T TY ++I
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLI 359
Query: 308 TALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVL 367
+ +A + + + G P + +N L+ GY K + D + +M GV+
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 368 PDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQV 427
D TY+ LI + G+ E A+ + +EM +P+ Y +L G D GE ++ ++
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 428 LKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFK 487
++++ S +E D YN++I + + A F + +G++PD T+N +I K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 488 CGRYDRAEELFEEMQERGYFPCTTTYNIMINL-LGEQERWEDVKRLLGNMRAQGLLPNVV 546
G A+ LF +M+E G+ P TYNI+I LGE + + K L+ ++ G +
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIKRCGFSVDAS 598
Query: 547 TYTTLVDI 554
T +VD+
Sbjct: 599 TVKMVVDM 606
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 161/371 (43%), Gaps = 37/371 (9%)
Query: 187 QRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
++ +L + Y+ +I ++ L+ A NL ++M G+ D I Y+ +I+ + D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
KL +++ KI D + +I F K G +A G+SP T TY ++
Sbjct: 301 G--AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I + +A + + + G P + +N L+ GY K + D + +M GV
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
+ D TY+ LI + G+ E A+ + +EM +P+ Y +L G D GE ++ +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 427 VLKEMKSS-----------------------------------GVEPDTHFYNVMIDTFG 451
+ ++++ S GV+PD YN+MI
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
K L A F +M +G P+ T+N LI H G ++ +L EE++ G+ +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 512 TYNIMINLLGE 522
T +++++L +
Sbjct: 599 TVKMVVDMLSD 609
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 149/327 (45%), Gaps = 11/327 (3%)
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
+A +F+E+ S +PR ++ L + + +ME G+ + +T S++I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
+ + A + ++ +P++ +S ++ G G +++ M G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P N +++ + A+ DRM+ G +P+ +T+ ++ K G+ A EL
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+M+ER Y+I+I+ L + ++ L M +G +++ YTTL+ +
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
+GR+DD + L + + + P +A ++LI+ F ++ + EA + + M
Sbjct: 295 AGRWDDGAKLLRDMIKRKIT-----------PDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
+ G+ PD VTYT+L+ + ++ K
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDK 370
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 248/534 (46%), Gaps = 57/534 (10%)
Query: 145 LAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISA 202
LA AV+S L +LL ++ L++ +L+ + T T ++ L+
Sbjct: 107 LAIAVISKLSSPKPVT--QLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRC 164
Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
C + +++A+ M++ G++ + ++ L+R N+I+++ + Y ++ +I+
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV--FYADMYRMEIK 222
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE---- 318
+ N +I K G KA FLG+ + G+ P TY ++ S GR IE
Sbjct: 223 SNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-IEGARL 281
Query: 319 -----------------------------AEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
A V E+KE GL P + +YN L++G G
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
L+ A EM + G++P +TY+ LI + E+A I+++E+ +S Y+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE 469
++ GY G+ ++ F + EM + G++P Y +I + N A F++++ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 470 GIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDV 529
G++PD + NTL+D H G DRA L +EM P TYN ++ L + ++E+
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 530 KRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV---MRTDG 586
+ L+G M+ +G+ P+ ++Y TL+ Y + G +AF V M + G
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKG--------------DTKHAFMVRDEMLSLG 567
Query: 587 LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVD 640
P+ L N+L+ ++Q A +L+ MK G+ P+ ++ ++++A+ +D
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 15/387 (3%)
Query: 259 DKIELDGQLLNDVIV-GFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
D++E +L D++V + +A+ + + G PKT T ++T LS R
Sbjct: 148 DRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIE 207
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
A + ++ +K +N ++ K G LK A+ + ME G+ P TY+ L+
Sbjct: 208 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
++ GR E AR+++ EM+ +P+ Y+ IL+ + G R +VL+EMK G+
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLV 324
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
PD+ YN++I L A A D M+ +G+ P T+NTLI F + + AE L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
E++E+G + TYNI+IN + + L M G+ P TYT+L+ + +
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
+ +A E E + + G+KP + +N+L++ AF++L+ M
Sbjct: 445 KNKTREADELFEKVVGK-----------GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHK 644
+ PD VTY LM+ L KF +
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEE 520
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 16/331 (4%)
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
EA F +KE G P+T+ N +L ++ +++A ++M R + + +T++++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
+ G+ + A+ L MEV KP Y+ ++ G+ RG + ++ EMKS G +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSE-GIEPDTITWNTLIDCHFKCGRYDRAEE 496
PD YN ++ + C + R + E G+ PD++++N LI G + A
Sbjct: 293 PDMQTYNPILS----WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
+EM ++G P TYN +I+ L + + E + L+ +R +G++ + VTY L++ Y
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
Q G A L D+ M TDG++P+ SLI + EA + +
Sbjct: 409 QHGDAKKAF----ALHDE-------MMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
+ G+KPD+V TLM + + FS
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF 183
VP + +++L CS+N +++A+A + K + ++ Y+ LIH L K+ A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF-YTYNTLIHGLFMENKIEAAE 382
Query: 184 LLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
+L + R L +TYN LI+ ++ D +KA L +M DG Y+ +I L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
R NK + +L++++ ++ D ++N ++ G G+ +A L + ++P
Sbjct: 443 CRKNKTREA--DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
TY ++ L G+ EA + E+K G+KP +YN L+ GY K G K A V
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
EM G P TY+ L+ + E A +L+EM+ PN
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 204/449 (45%), Gaps = 16/449 (3%)
Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
R +LE+ + M G D I + +I+ R K + K+ + +E
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA--AKILEILEGSGAVP 170
Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
D N +I G+ KAG+ + A+ L + +SP TY ++ +L +SG+ +A V
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
+ + + P Y L++ + + A ++ EM G PD TY++L++
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
GR + A L +M S +PN ++ IL G W ++L +M G P +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
N++I+ + L A+ ++M G +P+++++N L+ K + DRA E E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
RG +P TYN M+ L + + ED +L + ++G P ++TY T++D ++G+
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLK 623
AI+ L+ MR LKP + +SL+ + + EA + G++
Sbjct: 468 AIKLLD-----------EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 624 PDVVTYTTLMKALIRVDKFHKVFSSYLFF 652
P+ VT+ ++M L + + + +F
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 207/448 (46%), Gaps = 22/448 (4%)
Query: 191 LTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL-- 248
+ P T LI R KA ++ + G D I Y+++I + +I+++L
Sbjct: 137 IIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 249 LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVIT 308
L ++ + D N ++ +G +AM L P TY +I
Sbjct: 195 LDRM-------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 309 ALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLP 368
A A + +E+++ G P YN L+ G K G L +A +++M SG P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 369 DEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVL 428
+ T+++++ + + GRW A +L +M P+ ++ ++ +G R +L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 429 KEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKC 488
++M G +P++ YN ++ F K + A+ +RM+S G PD +T+NT++ K
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 489 GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548
G+ + A E+ ++ +G P TYN +I+ L + + +LL MRA+ L P+ +TY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 549 TTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDA 608
++LV + G+ D+AI+ F G++P+ + NS++ + ++
Sbjct: 488 SSLVGGLSREGKVDEAIK-----------FFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKAL 636
A L +M G KP+ +YT L++ L
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 198/415 (47%), Gaps = 4/415 (0%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQ 221
+ Y+++I ++ ++ A + R ++P +TYN ++ + + L++A+ ++ +M Q
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
+ D I Y+++I++ R + + ++ KL E+ D N ++ G K G
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAM--KLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
+A++FL G P T+ ++ ++ ++GR ++AE + ++ G P +N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
+ + G L A ++ +M + G P+ +Y+ L+ + + + A L+ M
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
P+ Y+ +L G+ + ++L ++ S G P YN +ID K A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
D M ++ ++PDTIT+++L+ + G+ D A + F E + G P T+N ++ L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
+ + + L M +G PN +YT L++ G +A+E L L ++ +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 184/420 (43%), Gaps = 46/420 (10%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
++++L++LC S + LQ+ CY + Y+ILI A R + A L
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R TP +TYN L++ + L++A+ ++ M G + I ++++++S+ T +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 244 -IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTAT 302
+D+ +LL D++ G SP T
Sbjct: 325 WMDAE------------------KLLADMLRK--------------------GFSPSVVT 346
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
+ +I L G A + E++ + G +P + +YN LL G+ K + A + M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G PD TY+ ++ A G+ E A +L ++ P Y+ ++ G G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
+ ++L EM++ ++PDT Y+ ++ + + A+ F GI P+ +T+N+++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
K + DRA + M RG P T+Y I+I L + ++ LL + +GL+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 225/508 (44%), Gaps = 23/508 (4%)
Query: 142 SIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTY 196
+++L VV + NL +Y+ LI +L + K +EA LL R R +TY
Sbjct: 351 ALNLVKRVVDFGVSPNL-----FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+ LI R L+ AL+ + +M G Y+ +I + I ++ + E+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA--EGFMAEM 463
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
K+E ++ G+ G +KA+R G G++P T+ +++ L +G
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLL 376
+A +F E+ E +KP YN +++GY + G + A + EM G++PD ++Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 377 IDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGV 436
I G+ A++ + + + + N Y+ +L G+ G+ + V +EM GV
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 437 EPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEE 496
+ D Y V+ID K+ M G++PD + + ++ID K G + A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 497 LFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYG 556
+++ M G P TY +IN L + + + L M+ +PN VTY +DI
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 557 QSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQY 616
+ G D +AV + GL + N LI F R EA ++
Sbjct: 764 K-GEVD---------MQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 617 MKENGLKPDVVTYTTLMKALIRVDKFHK 644
M +G+ PD +TYTT++ L R + K
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKK 840
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 204/467 (43%), Gaps = 26/467 (5%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
YN LI + + +A+ + + D + Y ++ L + + + L ++ E
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL--EMMDE 322
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
+ C + ++ ++ G K G +A+ + G+SP Y A+I +L +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EAE +F+ + + GL+P Y+ L+ + + G L A + EM +G+ + Y+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LI+ + G +A + EM +P Y+ ++ GY +G+ + ++ EM G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P + + ++ + + A+ F+ M ++P+ +T+N +I+ + + G +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
E +EM E+G P T +Y +I+ L + + K + + N + YT L+ +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 556 GQSGRFDDAIECLEGLSDQAVN------------------------AFRVMRTDGLKPSN 591
+ G+ ++A+ + + + V+ + M GLKP +
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
+ S+I+A + EAF + M G P+ VTYT ++ L +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 187/462 (40%), Gaps = 63/462 (13%)
Query: 231 YSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIEL--DGQLLNDVIVGFAKAGDASKAMRF 287
+ L+IQ R+ ++ D L+ K+ K+ L + + L+ ++ G K AM
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM----ITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
VG+ P Y VI +L A+ + ++ +G YN L+ G K
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
+ +A + ++ + PD TY L+ +E ++ EM P+
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
S ++ G R RG+ + ++K + GV P+ YN +ID+ K H A FDRM
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 468 SEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN--------- 518
G+ P+ +T++ LID + G+ D A EM + G YN +IN
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 519 -----------------------LLG---EQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
L+G + + RL M +G+ P++ T+TTL+
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
SG F GL AV F M +KP+ + N +I + E+ ++AF
Sbjct: 515 -----SGLFR------AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 613 VLQYMKENGLKPDVVTYTTLMKAL----------IRVDKFHK 644
L+ M E G+ PD +Y L+ L + VD HK
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 180/450 (40%), Gaps = 54/450 (12%)
Query: 180 YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
+ A +++++ T +TY +L+ + KAL L +M G ++ ++ L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
R I ++ KL+ E+ ++ + N +I G+ + GD SKA FL G+ P
Sbjct: 519 RAGLIRDAV--KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
T +Y +I L +G+ EA+ + L + + Y LL G+ + G L++A V
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 360 EMERSGV-----------------------------------LPDEHTYSLLIDAYANAG 384
EM + GV PD+ Y+ +IDA + G
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
++ A + M PN Y+ ++ G G + +M+ P+ Y
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+D K + +G+ +T T+N LI + GR + A EL M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
G P TY MIN E R DVK+ L +M +G+ P+ V Y TL I+G
Sbjct: 817 GVSPDCITYTTMIN---ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL--IHGC---- 867
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
C+ G +A M GL P+N
Sbjct: 868 -----CVAGEMGKATELRNEMLRQGLIPNN 892
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 38/350 (10%)
Query: 160 YSYE-LLYSILIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSK 218
YSY L++ + + K++ L L + Y L+ R LE+AL++ +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M Q G D + Y ++I + D L L KE+ D+
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHK--DRKLFFGLLKEMH-DR------------------ 676
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
GL P Y ++I A S +G EA +++ + G P Y
Sbjct: 677 ----------------GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
A++ G K G++ +AE + S+M+ +P++ TY +D + L +
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
N+ Y+ ++ G+ +G + +++ M GV PD Y MI+ + N +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
A+ ++ M +GI PD + +NTLI G +A EL EM +G P
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 18/341 (5%)
Query: 313 SGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
S R ++ VF+ + + L P + +ALL G VK + A + ++M G+ PD +
Sbjct: 169 SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVY 228
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
Y+ +I + A+ ++ ME + N Y+ ++ G + + + K++
Sbjct: 229 IYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL 288
Query: 432 KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491
++PD Y ++ K + D ML P ++L++ K G+
Sbjct: 289 AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKI 348
Query: 492 DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551
+ A L + + + G P YN +I+ L + ++ + + L M GL PN VTY+ L
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 552 VDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINA---FGEDQRDA 608
+D++ + G+ D A+ L + D GLK S NSLIN FG D A
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDT-----------GLKLSVYPYNSLINGHCKFG-DISAA 456
Query: 609 EAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
E F + M L+P VVTYT+LM K +K Y
Sbjct: 457 EGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 222/466 (47%), Gaps = 21/466 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
ID L L ++E KIE + + + VI K A+ + G+ P TY
Sbjct: 241 ID--LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L N R +A + ++ E + P +NAL+ +VK G L +AE + EM +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TYS LI+ + R + A+ + + M PN Y+ ++ G+
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ +T Y +I F + +A F +M+S+G+ P+ +T+NTL+D
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ ++A +FE +Q P TYNIMI + + + ED L ++ +G+ P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKP 589
+V+ Y T++ + C +GL ++A FR MR DG P
Sbjct: 539 DVIIYNTMISGF-----------CRKGLKEEADALFRKMREDGPLP 573
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 216/448 (48%), Gaps = 17/448 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + ++L KM++ G + Y+++I R ++I +L L K+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K I LLN G+ S A+ + +G P T T+ +I L
Sbjct: 148 KLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ + + + G +P Y ++ G K G + A ++++ME + + + Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S +ID+ + A + EME +PN YS +++ + W ++L +M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A +D M+ I+PD T+++LI+ R D
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+ +FE M + FP TYN +IN + +R ++ L M +GL+ N VTYTTL
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL-- 441
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAV 613
I+G F A +C D A F+ M +DG+ P+ + N+L++ ++ + +A V
Sbjct: 442 IHG----FFQARDC-----DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 614 LQYMKENGLKPDVVTYTTLMKALIRVDK 641
+Y++ + ++P + TY +++ + + K
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 42/389 (10%)
Query: 164 LLYSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSK 218
+ ++ LIH L K EA L R QR P +TY +++ + D++ A NL++K
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE------------------CD- 259
M + + YS VI SL + D +L L+ E+E C+
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDAL--NLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 260 ----------------KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
KI + N +I F K G +A + + P TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I R EA+ +FE + P YN L+ G+ K + + + EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
G++ + TY+ LI + A ++A++V K+M PN Y+ +L G G+ ++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
V + ++ S +EP + YN+MI+ K + F + +G++PD I +NT+I
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTT 512
+ G + A+ LF +M+E G P + T
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 11/305 (3%)
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
Y +L+ + L DA + M +S LP ++ L+ A A +++ + ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
N + Y+ ++ + R + +L +M G EP + +++ + +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A+A D+M+ G PDTIT+ TLI F + A L + M +RG P TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
N L ++ + LL M A + NVV Y+T++D C D A+N
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL-----------CKYRHEDDALN 281
Query: 578 AFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
F M G++P+ + +SLI+ +R ++A +L M E + P+VVT+ L+ A +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 638 RVDKF 642
+ K
Sbjct: 342 KEGKL 346
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 205/437 (46%), Gaps = 16/437 (3%)
Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
+LE+ ++L KM Q +++S V+ + ++ D L+ L+ +E I D
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD--LVISLFHHMEVCGIGHDLYS 106
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
N VI + A+ +G G P T +++I R +A + +++
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
E G +P YN ++ G K+G + DA + MER GV D TY+ L+ +GRW
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 388 SARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMI 447
A ++++M + PN ++ ++ + G++ ++ +EM V+PD YN +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 448 DTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYF 507
+ + + A D M+++G PD +T+NTLI+ K R D +LF EM +RG
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
T TYN +I + R + + + M ++ PN+ TY+ L +YG C
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSIL--LYGL---------C 392
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
+ ++A+ F M+ ++ N +I+ + +A+ + + + GLKPDVV
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 628 TYTTLMKALIRVDKFHK 644
+YTT++ R ++ K
Sbjct: 453 SYTTMISGFCRKRQWDK 469
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 18/405 (4%)
Query: 149 VVSWLQKHNLCYSYELLYS--ILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALIS 201
V+S +C LYS I+I+ L R + A ++ + + +T ++LI+
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 202 ACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKI 261
+ + + A++L+SKM + G+ D + Y+ +I + ++ ++ +L+ +E D +
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV--ELFDRMERDGV 205
Query: 262 ELDGQLLNDVIVGFAKAG---DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
D N ++ G +G DA++ MR + M V P T+ AVI G+ E
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV---PNVITFTAVIDVFVKEGKFSE 262
Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
A ++EE+ + P YN+L+ G G + +A+ ++ M G LPD TY+ LI+
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
+ + R + + +EM ++ Y+ I+ GY G ++ M S P
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RP 379
Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
+ Y++++ + A+ F+ M IE D T+N +I K G + A +LF
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
+ +G P +Y MI+ + +W+ L M+ GLLP
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 211/471 (44%), Gaps = 32/471 (6%)
Query: 50 SSFSSSSFTSKQNDTEEEEEDDDDVLSLQKQR----YDFTPLLNFLSENSNSESASALAS 105
S F +F++K++ EEE D +Q + DF+ +L+ ++++ N + +L
Sbjct: 34 SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISL-- 91
Query: 106 SPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE-- 163
F E ++++ N S +A +VV + K + YE
Sbjct: 92 ---------FHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK----FGYEPD 138
Query: 164 -LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEKALNLMS 217
+ S LI+ + ++++A L + R + YN +I + + A+ L
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
+M +DG D + Y+ ++ L + + + +L +++ I + VI F K
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDA--ARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
G S+AM+ + P TY ++I L GR EA+ + + + G P
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN L+ G+ K + + + EM + G++ D TY+ +I Y AGR ++A+ + M+
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
++PN YS +L G ++ + + M+ S +E D YN++I K +
Sbjct: 377 ---SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
A F + +G++PD +++ T+I + ++D+++ L+ +MQE G P
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
++ F M GI D ++N +I+C +C R+ A + +M + GY P T + +IN
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
+ R D L+ M G P+VV Y T++D C GL + AV
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID-----------GSCKIGLVNDAVEL 196
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
F M DG++ + NSL+ R ++A +++ M + P+V+T+T ++ ++
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 639 VDKFHKVFSSY 649
KF + Y
Sbjct: 257 EGKFSEAMKLY 267
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 215/460 (46%), Gaps = 17/460 (3%)
Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ R + + +N L+SA A+ + ++L KM++ Y+++I R ++
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 244 IDSSL--LQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTA 301
I +L L K+ K I LLN G+ S A+ + +G P T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLN----GYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 302 TYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEM 361
T+ +I L + EA A+ + + + G +P Y ++ G K G A ++++M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 362 ERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEW 421
E + + D ++ +ID+ + A + KEME +PN YS +++ G W
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 422 QRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTL 481
Q+L +M + P+ +N +ID F K A +D M+ I+PD T+N+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 482 IDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
++ R D+A+++FE M + FP TYN +I + +R ED L M +GL
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 542 LPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAF 601
+ + VTYTTL+ G F D G D A F+ M +DG+ P + + L++
Sbjct: 432 VGDTVTYTTLI-----QGLFHD------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
+ + +A V YM+++ +K D+ YTT+++ + + K
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 225/480 (46%), Gaps = 22/480 (4%)
Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
Y+ILI+ R ++ A LL + +L + +T ++L++ + A+ L+ +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSS--LLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
+ GY D I ++ +I L NK + L+ ++ + + G ++N G K
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN----GLCKR 238
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
GD A+ L + + + +I +L +A +F+E++ G++P Y
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
++L+ G DA ++S+M + P+ T++ LIDA+ G++ A + +M
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
P+ F Y+ ++ G+ + Q+ + M S PD YN +I F K +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
F M G+ DT+T+ TLI F G D A+++F++M G P TY+I+++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 519 LLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNA 578
L + E + M+ + ++ YTT+++ ++G+ DD + LS
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS------ 532
Query: 579 FRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
G+KP+ + N++I+ + EA+A+L+ MKE+G P+ TY TL++A +R
Sbjct: 533 -----LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 7/399 (1%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR--QR-LTP--LTYNALISACARNDDLEKALNLMSKMR 220
++ LIH L K EA L R QR P +TY +++ + D + ALNL++KM
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME 252
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
D + ++ +I SL + +D +L L+KE+E I + + +I G
Sbjct: 253 AAKIEADVVIFNTIIDSLCKYRHVDDAL--NLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
S A + L ++P T+ A+I A G+ +EAE +++++ + + P YN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G+ L A+ + M PD TY+ LI + + R E + +EM
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 401 AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAM 460
++ Y+ ++ G G+ +V K+M S GV PD Y++++D L A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 461 AAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
FD M I+ D + T+I+ K G+ D +LF + +G P TYN MI+ L
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 521 GEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
+ ++ LL M+ G LPN TY TL+ + + G
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 21/495 (4%)
Query: 130 HSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR 188
+++L N S I LA A++ + K L Y ++ S L++ +++ +A L +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMK--LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 189 Q-----RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R +T+ LI ++ +A+ L+ +M Q G + + Y +V+ L +
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG- 239
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
D+ L L ++E KIE D + N +I K A+ + G+ P TY
Sbjct: 240 -DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+++I+ L + GR +A + ++ E + P +NAL+ +VK G +AE + +M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
+ PD TY+ L++ + R + A+ + + M P+ Y+ ++ G+ +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
++ +EM G+ DT Y +I +A F +M+S+G+ PD +T++ L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
G+ ++A E+F+ MQ+ Y MI + + + +D L ++ +G+ P
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
NVVTY T++ SG C + L +A + M+ DG P++ N+LI A
Sbjct: 539 NVVTYNTMI-----SGL------CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 604 DQRDAEAFAVLQYMK 618
D A + +++ M+
Sbjct: 588 DGDKAASAELIREMR 602
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 11/381 (2%)
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
N +I F + S A+ LG +G P T ++++ + R +A A+ +++ E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
G +P T + L+ G +A +V M + G P+ TY ++++ G +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L +ME + + + I++ I+ + KEM++ G+ P+ Y+ +I
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
Y A M+ + I P+ +T+N LID K G++ AE+L+++M +R P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
TYN ++N +R + K++ M ++ P+VVTY TL+ + +S R +D E
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE-- 421
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
FR M GL + +LI D A V + M +G+ PD++T
Sbjct: 422 ---------LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 629 YTTLMKALIRVDKFHKVFSSY 649
Y+ L+ L K K +
Sbjct: 473 YSILLDGLCNNGKLEKALEVF 493
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 2/331 (0%)
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
R +TY++LIS A L+S M + + + + ++ +I + + K +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA-- 349
Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
+KLY ++ I+ D N ++ GF KA + P TY +I
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
S R + +F E+ GL T Y L++G G +A+ V +M GV PD
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLK 429
TYS+L+D N G+ E A V M+ S K + +IY+ ++ G G+ + +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 430 EMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCG 489
+ GV+P+ YN MI L A A +M +G P++ T+NTLI H + G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLL 520
+ EL EM+ + +T ++ N+L
Sbjct: 590 DKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 169/373 (45%), Gaps = 21/373 (5%)
Query: 281 ASKAMRFLGMAQ-GVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
A ++ GM G S + Y ++ + + +A +F + +S P +N
Sbjct: 30 APSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFN 89
Query: 340 ALLKGYVKMGYLKDAEFVVS---EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
LL KM K + V+S +M+R ++ +TY++LI+ + + A +L +M
Sbjct: 90 KLLSAIAKM---KKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
+P+ S +L GY ++ +M G PDT + +I +N
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A+A DRM+ G +P+ +T+ +++ K G D A L +M+ +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 517 INLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
I+ L + +D L M +G+ PNVVTY++L+ GR+ DA + L + ++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 577 NAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
N P+ + N+LI+AF ++ + EA + M + + PD+ TY +L+
Sbjct: 327 N-----------PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 637 I---RVDKFHKVF 646
R+DK ++F
Sbjct: 376 CMHDRLDKAKQMF 388
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/530 (25%), Positives = 233/530 (43%), Gaps = 54/530 (10%)
Query: 167 SILIHALGRSEKLYEA----FLLSQRQRLTPL----TYNALISACARNDD---------- 208
S +IH L RS +L +A + +R ++ L + ++ S C ND
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 209 ----LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
L +A + +R G+ + +I SL R ++ L +Y+EI + ++
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE--LAWGVYQEISRSGVGIN 234
Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
LN ++ K G K FL Q G+ P TY +I+A S+ G EA +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY-SLLIDAYANA 383
+ G P YN ++ G K G + A+ V +EM RSG+ PD TY SLL++A
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
E+ + V +M P+ +S +++ + G + +K +G+ PD Y
Sbjct: 355 DVVETEK-VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR--YDRAEELFEEM 501
++I + + + AM + ML +G D +T+NT++ H C R A++LF EM
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL--HGLCKRKMLGEADKLFNEM 471
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER FP + T I+I+ + ++ L M+ + + +VVTY TL+D +G+ G
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 562 DDAIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSL 597
D A E + + + AFRV M + +KP+ + NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
I + ++ + L+ M G PD ++Y TL+ +R + K F
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 209/478 (43%), Gaps = 28/478 (5%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
T N +++A ++ +EK +S++++ G + D + Y+ +I + + ++ + +L
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF--ELMN 294
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
+ N VI G K G +A GLSP + TY +++ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+E E VF +++ + P +++++ + + G L A + ++ +G++PD Y+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+LI Y G A + EM + Y+ IL G R ++ EM
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+ PD++ ++ID K L +AM F +M + I D +T+NTL+D K G D A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
+E++ +M + P +Y+I++N L + + R+ M ++ + P V+ +++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 555 YGQSGRFDDAIECLEGLSDQAV---------------------NAFRVMRT-----DGLK 588
Y +SG D LE + + AF +++ GL
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVF 646
P NS+++ F + EA VL+ M E G+ PD TYT ++ + D + F
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 219/523 (41%), Gaps = 52/523 (9%)
Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYN 197
++LA+ V + + + + L +I+++AL G+ EK+ Q + + P +TYN
Sbjct: 216 VELAWGVYQEISRSGVGINVYTL-NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS----------- 246
LISA + +E+A LM+ M G+ Y+ VI L + K +
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 247 ----------SLL------------QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKA 284
SLL +K++ ++ + D + ++ F ++G+ KA
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 285 MRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKG 344
+ + + GL P Y +I G A + E+ + G YN +L G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 345 YVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPN 404
K L +A+ + +EM + PD +T ++LID + G ++A + ++M+ + +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 405 SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFD 464
Y+ +L G+ G+ ++ +M S + P Y+++++ L A +D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 465 RMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQE 524
M+S+ I+P + N++I + + G E E+M G+ P +YN +I +E
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 525 RWEDVKRLLGNMRAQ--GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVM 582
L+ M + GL+P+V TY +++ + C + +A R M
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF-----------CRQNQMKEAEVVLRKM 683
Query: 583 RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPD 625
G+ P +IN F EAF + M + G PD
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 10/367 (2%)
Query: 115 FKLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALG 174
F S VP + S + +L + + ++D A + +++ L ++Y+ILI
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD-NVIYTILIQGYC 421
Query: 175 RSEKLYEAF-----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFI 229
R + A +L Q + +TYN ++ + L +A L ++M + D
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
+++I + + +++ +L+++++ +I LD N ++ GF K GD A
Sbjct: 482 TLTILIDGHCKLGNLQNAM--ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
+ P +Y+ ++ AL + G EA V++E+ +KP N+++KGY + G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAK--PNSFI 407
D E + +M G +PD +Y+ LI + A ++K+ME P+ F
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
Y+ IL G+ + + + VL++M GV PD Y MI+ F + L A D ML
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 468 SEGIEPD 474
G PD
Sbjct: 720 QRGFSPD 726
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 13/445 (2%)
Query: 205 RNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELD 264
R+ L A++L S M + ++++ ++ ++ + K D ++ L K++E I D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRND 119
Query: 265 GQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFE 324
N VI F S A+ LG +G P T +++ R +A ++ +
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 325 ELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
++ E G KP AYNA++ K + DA E+ER G+ P+ TY+ L++ N+
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
RW A +L +M PN YS +L + G+ ++ +EM ++PD Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+I+ ++ + A FD M+S+G D +++NTLI+ K R + +LF EM +R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
G T TYN +I + + + M G+ P++ TY L+ +G + A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 565 IECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
+ E + + ++ V T ++I + + EA+++ + GLKP
Sbjct: 420 LVIFEDMQKREMDLDIVTYT-----------TVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 625 DVVTYTTLMKALIRVDKFHKVFSSY 649
D+VTYTT+M L H+V + Y
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALY 493
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 199/438 (45%), Gaps = 19/438 (4%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS--SLLQKLY 253
+N L+SA + + ++L KM G D +++VI ++ S+L K+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 254 K-EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSN 312
K E D++ + G L+N GF + S A+ + +G P Y A+I +L
Sbjct: 148 KLGYEPDRVTI-GSLVN----GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 313 SGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHT 372
+ R +A F+E++ G++P Y AL+ G DA ++S+M + + P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
YS L+DA+ G+ A+ + +EM P+ YS ++ G Q+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
S G D YN +I+ F K + M F M G+ +T+T+NTLI F+ G D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
+A+E F +M G P TYNI++ L + E + +M+ + + ++VTYTT++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
++G+ ++A LS GLKP + ++++ E A
Sbjct: 443 RGMCKTGKVEEAWSLFCSLS-----------LKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 613 VLQYMKENGLKPDVVTYT 630
+ MK+ GL + T +
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 181/392 (46%), Gaps = 12/392 (3%)
Query: 159 CYSYELLYSILIHALGRSEKL-YEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMS 217
C+ S+ + LG+ KL YE +T +L++ R + + A++L+
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEP---------DRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
KM + GY D + Y+ +I SL +T +++ + +KEIE I + ++ G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF--DFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
+ S A R L ++P TY+A++ A +G+ +EA+ +FEE+ + P
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
Y++L+ G + +A + M G L D +Y+ LI+ + A R E + +EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
N+ Y+ ++ G+ G+ + + +M G+ PD YN+++ L
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A+ F+ M ++ D +T+ T+I K G+ + A LF + +G P TY M+
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ L + +V+ L M+ +GL+ N T +
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>sp|Q9FFZ2|PP402_ARATH Putative pentatricopeptide repeat-containing protein At5g36300
OS=Arabidopsis thaliana GN=At5g36300 PE=3 SV=3
Length = 330
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 77/388 (19%)
Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
+ N I F + G+ ++AM L +G P +Y + I L++ RT+EA+A+F E+
Sbjct: 13 MYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEV 72
Query: 327 KESGL--KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAG 384
+ + YNAL+ Y+
Sbjct: 73 VRFMIYGSYSVRLYNALVSRYL-------------------------------------- 94
Query: 385 RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
R E + V+ EM+ + NSF+Y +I+ YRD G W++ +++E++ G+ D YN
Sbjct: 95 RKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYN 154
Query: 445 VMIDTFGKYNCLHHAMAAFDRM-LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
+IDTFGKY L + +++ S P+ TWN+LI H G D A ELF +
Sbjct: 155 SVIDTFGKYGELDEELQVLEKLQRSSDSRPNIRTWNSLIRWHCHHGAVDMALELFTMI-- 212
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
+ED+ L+G +++QG+ P+ + TL + Y Q
Sbjct: 213 ----------------------FEDIGELVGKLKSQGVAPSANLFCTLANAYAQ------ 244
Query: 564 AIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKEN-GL 622
+GL Q V ++M +G++P+ + LN LINAFG + EA ++ ++KE +
Sbjct: 245 -----QGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKETVWI 299
Query: 623 KPDVVTYTTLMKALIRVDKFHKVFSSYL 650
PDVVTY+TLMKA R K+ V S YL
Sbjct: 300 HPDVVTYSTLMKAFTRAKKYEMVCSFYL 327
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 80/348 (22%)
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ---SLTRT----- 241
R++ YN+ I R + +A++L++++ G D ++Y I+ SL RT
Sbjct: 8 RISLSMYNSWIRYFCRTGETNEAMSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADA 67
Query: 242 -------------------NKIDSSLLQK-----LYKEIECDKIELDGQLLNDVIVGFAK 277
N + S L+K + E++ K L+ + +I +
Sbjct: 68 LFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRD 127
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESG-LKPRTK 336
G KA+ + + +GL Y +VI G E V E+L+ S +P +
Sbjct: 128 NGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQVLEKLQRSSDSRPNIR 187
Query: 337 AYNALLKGYVKMG-----------YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGR 385
+N+L++ + G +D +V +++ GV P + + L +AYA G
Sbjct: 188 TWNSLIRWHCHHGAVDMALELFTMIFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGL 247
Query: 386 WESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNV 445
+ VLK ME + G+EP+ NV
Sbjct: 248 CKQTVKVLKMME-----------------------------------NEGIEPNLIMLNV 272
Query: 446 MIDTFGKYNCLHHAMAAFDRML-SEGIEPDTITWNTLIDCHFKCGRYD 492
+I+ FG A++ + + + I PD +T++TL+ + +Y+
Sbjct: 273 LINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYE 320
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 216/452 (47%), Gaps = 18/452 (3%)
Query: 190 RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSS-- 247
RL Y++L+ + A+ D A +M DG+ I+Y ++ +L + +++
Sbjct: 157 RLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEM 216
Query: 248 LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAV 306
+ K+ K LD + +++GF + + A++ F M++ V +P + +Y+ +
Sbjct: 217 FMSKILK----IGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I L GR EA + +++ E G +P T+ Y L+K G + A + EM G
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
P+ HTY++LID G+ E A V ++M P+ Y+ ++ GY G F+
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
+L M+ +P+ +N +++ + + A+ RML G+ PD +++N LID
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
+ G + A +L M P T+ +IN +Q + + LG M +G+ + V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
T TTL+D + G+ DA+ LE L R++ T P +LN +++ + +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLV-----KMRILTT----PH--SLNVILDMLSKGCK 561
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
E A+L + + GL P VVTYTTL+ LIR
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 230/525 (43%), Gaps = 56/525 (10%)
Query: 166 YSILIHALGRSEKLYEAFLLSQRQR-----LTPLTYNALISACARNDDLEKALNLMSKMR 220
YS L+ +L + + + A++ +R + + Y +++A +N E A MSK+
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 221 QDGYHCD-FINYSLVIQSLTRTNKIDS-SLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
+ G+ D I SL++ N D+ + + KE+ C + +L I G +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL---IHGLCEV 279
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
G +A G P T TY +I AL + G +A +F+E+ G KP Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
L+ G + G +++A V +M + + P TY+ LI+ Y GR A +L ME
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
KPN ++ ++ G G+ + +LK M +G+ PD YNV+ID + ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 459 A------MAAFD-----------------------------RMLSEGIEPDTITWNTLID 483
A M FD ML +GI D +T TLID
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLP 543
K G+ A + E + + + N+++++L + + ++ +LG + GL+P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 544 NVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGE 603
+VVTYTTLVD +SG + LE +M+ G P+ +IN +
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILE-----------LMKLSGCLPNVYPYTIIINGLCQ 628
Query: 604 DQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSS 648
R EA +L M+++G+ P+ VTYT ++K + K + +
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 22/500 (4%)
Query: 83 DFTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSS 142
D+ ++N L +N +E+A S K+ + + + + SLL C +
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMS----------KILKIGFVLDSHIGTSLLLGFCRGLNL 246
Query: 143 IDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
D A V + K C + YSILIH L +L EAF L + + + TY
Sbjct: 247 RD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE 255
LI A ++KA NL +M G + Y+++I L R KI+ + + +K+ K
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK- 364
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
D+I N +I G+ K G A L + + P T+ ++ L G+
Sbjct: 365 ---DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
+A + + + ++GL P +YN L+ G + G++ A ++S M + PD T++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
+I+A+ G+ + A L M + + ++ G G+ + +L+ +
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ H NV++D K + +A ++ G+ P +T+ TL+D + G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
+ E M+ G P Y I+IN L + R E+ ++LL M+ G+ PN VTYT +V Y
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 556 GQSGRFDDAIECLEGLSDQA 575
+G+ D A+E + + ++
Sbjct: 662 VNNGKLDRALETVRAMVERG 681
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 171/389 (43%), Gaps = 21/389 (5%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
+ L+K LC ID A+ + + C Y++LI L R K+ EA + ++
Sbjct: 304 YTVLIKALCD-RGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 189 Q---RLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
R+ P +TYNALI+ ++ + A L++ M + + ++ +++ L R K
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDV------IVGFAKAGDASKAMRFLGMAQGVGLS 297
YK + K LD L D+ I G + G + A + L +
Sbjct: 422 P--------YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P T+ A+I A G+ A A + G+ L+ G K+G +DA F+
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ + + +L H+ ++++D + + + +L ++ P+ Y+ ++ G
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
G+ +F++L+ MK SG P+ + Y ++I+ ++ + A M G+ P+ +T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGY 506
+ ++ + G+ DRA E M ERGY
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 165/359 (45%), Gaps = 9/359 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYEAFLL 185
+ L+ LC + I+ A V + K + + + Y+ LI+ GR +E +
Sbjct: 339 YTVLIDGLCR-DGKIEEANGVCRKMVKDRI-FPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 186 SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+++ P T+N L+ R KA++L+ +M +G D ++Y+++I L R
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
++++ KL + C IE D +I F K G A A FLG+ G+S T
Sbjct: 457 MNTA--YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+I + G+T +A + E L + + + N +L K +K+ ++ ++ +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
G++P TY+ L+D +G + +L+ M++S PN + Y+ I+ G G +
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
++L M+ SGV P+ Y VM+ + L A+ M+ G E + +++L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 143/332 (43%), Gaps = 39/332 (11%)
Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYE 181
R P+ + ++ L N + + A+ +++ ++K C ++ L+ L R K Y+
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYK 424
Query: 182 AFLLSQR---QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQ 236
A L +R L+P ++YN LI R + A L+S M D + ++ +I
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 237 SLTRTNKIDSS---LLQKLYKEIECDKIE----LDGQL---------------------- 267
+ + K D + L L K I D++ +DG
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 268 ----LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
LN ++ +K + + LG +GL P TY ++ L SG + +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
E +K SG P Y ++ G + G +++AE ++S M+ SGV P+ TY++++ Y N
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415
G+ + A ++ M + N IYS +L G+
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 18/232 (7%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF- 183
P L + + N D+A A + + + + E+ + LI + + K +A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD-EVTGTTLIDGVCKVGKTRDALF 532
Query: 184 ----LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
L+ R TP + N ++ ++ +++ L ++ K+ + G + Y+ ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLN-----DVIVGFAKAGDASKAMRFLGMAQGV 294
R+ I S ++ +E ++L G L N +I G + G +A + L Q
Sbjct: 593 RSGDITGS-----FRILE--LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
G+SP TY ++ N+G+ A + E G + + Y++LL+G+V
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+ M+ G+ Y ++N L + E + + + G + + T+L+ + +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
DA++ + +S + A P++++ + LI+ E R EAF + M
Sbjct: 243 GLNLRDALKVFDVMSKEVTCA----------PNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
E G +P TYT L+KAL K F+ +
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 244/529 (46%), Gaps = 24/529 (4%)
Query: 122 RAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYEL-LYSILIHALGRSEKLY 180
R P+ + S L + + + DL ++ +Q NL S+ L YSI I+ R +L
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ--NLGISHNLYTYSIFINYFCRRSQLS 127
Query: 181 EAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235
A +L + +L + +T N+L++ + + +A+ L+ +M + GY D + ++ ++
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 236 QSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295
L + NK ++ L + + + D VI G K G+ A+ L +
Sbjct: 188 HGLFQHNKASEAV--ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 296 LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAE 355
+ Y +I L +A +F +++ G+KP YN L+ G DA
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 356 FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS-HAKPNSFIYSRILAG 414
++S+M + PD ++ LIDA+ G+ A + EM S H P+ Y+ ++ G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
+ + +V +EM G+ +T Y +I F + +A F +M+S+G+ PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+T+N L+D G + A +FE MQ+R TY MI L + + ED L
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
++ +G+ PNVVTYTT++ + C +GL ++A F M+ DG P++
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGF-----------CRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL--IRVDK 641
N+LI A D +A + +++ M+ G D T+ + L R+DK
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 203/434 (46%), Gaps = 14/434 (3%)
Query: 209 LEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLL 268
L+ A+ L M + + +S ++ ++ + NK D L+ L ++++ I +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTY 113
Query: 269 NDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKE 328
+ I F + S A+ LG +G P T +++ + R EA A+ +++ E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 329 SGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWES 388
G +P T + L+ G + +A +V M G PD TY +I+ G +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 389 ARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
A +L +ME + + IY+ I+ G F + +M++ G++PD YN +I
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM-QERGYF 507
Y A ML + I PD + +N LID K G+ AE+L++EM + + F
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 508 PCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIEC 567
P YN +I + +R E+ + M +GL+ N VTYTTL I+G F A +C
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL--IHG----FFQARDC 407
Query: 568 LEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVV 627
D A F+ M +DG+ P + N L++ + A V +YM++ +K D+V
Sbjct: 408 -----DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 628 TYTTLMKALIRVDK 641
TYTT+++AL + K
Sbjct: 463 TYTTMIEALCKAGK 476
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 490 RYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT 549
+ D A LF +M + FP ++ +++ + + +++ V L M+ G+ N+ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 550 TLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
++ + + + A+ L ++M+ G PS + LNSL+N F R +E
Sbjct: 115 IFINYFCRRSQLSLALAILG----------KMMKL-GYGPSIVTLNSLLNGFCHGNRISE 163
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDK 641
A A++ M E G +PD VT+TTL+ L + +K
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 11/212 (5%)
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P ++ ++ K N ++ ++M + GI + T++ I+ + + A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+M + GY P T N ++N R + L+ M G P+ VT+TTLV Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
+ +A+ +E M G +P + ++IN + A +L M
Sbjct: 193 HNKASEAVALVER-----------MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
++ ++ DVV Y T++ L + F +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 212/480 (44%), Gaps = 29/480 (6%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+T+ LI+ + ++++A +L M Q G D I YS +I + + + KL+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML--GMGHKLF 344
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
+ ++LD + + I + K+GD + A G+SP TY +I L
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
GR EA ++ ++ + G++P Y++L+ G+ K G L+ + +M + G PD Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+L+D + G A +M + N +++ ++ G+ + +V + M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G++PD + ++ L A+ F RM G+EPD + + TLID K +
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
+LF+ MQ N++I+LL + R ED + N+ + P++VTY T++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 554 IYGQSGRFDDA------------------------IECLEGLSDQAVNAFRVMRTDGLKP 589
Y R D+A + C D A+ F +M G KP
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
+ + L++ F + +F + + M+E G+ P +V+Y+ ++ L RVD+ +F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 195/443 (44%), Gaps = 19/443 (4%)
Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID--SSLLQKLYKE- 255
L+ C R ++KAL + Q G + ++ SL ++++D + KL +
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG 211
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
IE + G +L+ + F K G+ +KA+ F + G + V+ LS
Sbjct: 212 IEPSGVSAHGFVLDAL---FCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI 267
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
+ A + + + G P + L+ G+ K G + A + ME+ G+ PD YS
Sbjct: 268 EV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LID Y AG + + K + ++S + Y G+ V K M G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 436 VEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAE 495
+ P+ Y ++I + ++ A + ++L G+EP +T+++LID KCG
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 496 ELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIY 555
L+E+M + GY P Y ++++ L +Q R M Q + NVV + +L+D +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 556 GQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
+ RFD+A++ FR+M G+KP +++ + R EA +
Sbjct: 507 CRLNRFDEALK-----------VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555
Query: 616 YMKENGLKPDVVTYTTLMKALIR 638
M + GL+PD + Y TL+ A +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCK 578
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 210/465 (45%), Gaps = 29/465 (6%)
Query: 144 DLAYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAF-----LLSQRQRLTPLT 195
DLA A V + K LC + Y+ILI L + ++YEAF +L + + +T
Sbjct: 371 DLATASVVY--KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
Y++LI + +L L M + GY D + Y +++ L++ + ++ + +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM--RFSVK 486
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
+ I L+ + N +I G+ + +A++ + G+ P AT+ V+ GR
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 316 TIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSL 375
EA +F + + GL+P AY L+ + K + M+R+ + D ++
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY---RDRGEWQRTFQVLKEMK 432
+I R E A + +P+ Y+ ++ GY R E +R F++LK
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK--- 663
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
+ P+T ++I K N + A+ F M +G +P+ +T+ L+D K +
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
+ +LFEEMQE+G P +Y+I+I+ L ++ R ++ + LLP+VV Y L+
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
Y + GR +A E M +G+KP +L +L
Sbjct: 784 RGYCKVGRLVEAALLYEH-----------MLRNGVKPDDLLQRAL 817
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 11/184 (5%)
Query: 466 MLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQER 525
+L G P+ +T+ TLI+ K G DRA +LF+ M++RG P Y+ +I+ +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 526 WEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTD 585
+L +G+ +VV +++ +D+Y +SG L+ +V ++ M
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD----------LATASV-VYKRMLCQ 385
Query: 586 GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKV 645
G+ P+ + LI +D R EAF + + + G++P +VTY++L+ +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 646 FSSY 649
F+ Y
Sbjct: 446 FALY 449
Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 481 LIDCHFKCGRYDRAEELFEEMQERGY-FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQ 539
L++C + G D+A E+F + G P + Y ++ +L+G +R + + +
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIG-SDRVDLIADHFDKLCRG 210
Query: 540 GLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLIN 599
G+ P+ V+ G DA+ C +G +A++ R++ G + ++ N ++
Sbjct: 211 GIEPSGVS---------AHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLK 260
Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
DQ + A +L + + G P+VVT+ TL+ + + + F +
Sbjct: 261 GLSVDQIEV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 200/439 (45%), Gaps = 13/439 (2%)
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
+ A + ++ L + +M G + ++V++ L R +++ S +KL KE
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS--KKLIKEFS 251
Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
I+ + N +I + K D S L + + G+ TY ++ +G+
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
+AE +F+E++E G++ Y +L+ + G +K A + E+ G+ P +TY LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
D G +A I++ EM+ +++ ++ GY +G + M+ G +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
D N + F + A RM+ G++ T+++ LID + K G + A+ L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
F EM +G P TYN+MI +Q + ++ ++L NM A G+ P+ TYT+L I+G
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL--IHG- 548
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
EC+ D+A+ F M GL +++ +I+ + + EAF + M
Sbjct: 549 --------ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 618 KENGLKPDVVTYTTLMKAL 636
K G D YT L+ ++
Sbjct: 601 KRKGYTIDNKVYTALIGSM 619
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 2/358 (0%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN +I+A + D ++ M++DG + + Y+L+++ + K+ + +KL+
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA--EKLFD 318
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
E+ IE D + +I + G+ +A GLSP + TY A+I + G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
AE + E++ G+ +N L+ GY + G + +A + ME+ G D T +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+ + R++ A+ L M K ++ Y+ ++ Y G + ++ EM S
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
GV+P+ YNVMI + K + A M + G++PD+ T+ +LI D A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
LF EM +G + TY +MI+ L + + ++ L M+ +G + YT L+
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 164/380 (43%), Gaps = 27/380 (7%)
Query: 295 GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDA 354
GLS + + A R +F + +SG+K + +++G + G ++ +
Sbjct: 184 GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243
Query: 355 EFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG 414
+ ++ E G+ P+ +TY+ +I+AY + VLK M+ N Y+ ++
Sbjct: 244 KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMEL 303
Query: 415 YRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
G+ ++ EM+ G+E D H Y +I + + A FD + +G+ P
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 475 TITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
+ T+ LID K G AE L EMQ +G +N +I+ + ++ +
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDA------------------------IECLEG 570
M +G +V T T+ + + R+D+A + C EG
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 571 LSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYT 630
++A F M + G++P+ + N +I A+ + + EA + M+ NG+ PD TYT
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 631 TLMKALI---RVDKFHKVFS 647
+L+ VD+ ++FS
Sbjct: 544 SLIHGECIADNVDEAMRLFS 563
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 215/473 (45%), Gaps = 15/473 (3%)
Query: 174 GRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINY 231
G+ E++ F L Q++ + TY + + + L++A + KMR+ G+ + +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 232 SLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMA 291
+ +I L ++ ++ ++Y+ + + Q + ++VG K D M L
Sbjct: 192 NGLIHLLLKSRFCTEAM--EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 292 QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYL 351
+ +GL P T+ I L +G+ EA + + + + G P Y L+ L
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 352 KDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
A+ V +M+ PD TY L+D +++ +S + EME P+ ++ +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 412 LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGI 471
+ G + F L M+ G+ P+ H YN +I + + L A+ F M S G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 472 EPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKR 531
+P T+ ID + K G A E FE+M+ +G P N + L + R + K+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 532 LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN 591
+ ++ GL+P+ VTY ++ Y + G D+AI+ L M +G +P
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE-----------MMENGCEPDV 538
Query: 592 LALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
+ +NSLIN + R EA+ + MKE LKP VVTY TL+ L + K +
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 235/499 (47%), Gaps = 32/499 (6%)
Query: 166 YSILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMR 220
YS L+ LG+ + LL + + L T+ I R + +A ++ +M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+G D + Y+++I +L K+D + ++++++++ + + D ++ F+ D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCA--KEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+F + G P T+ ++ AL +G EA + +++ G+ P YN
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400
L+ G +++ L DA + ME GV P +TY + ID Y +G SA ++M+
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 401 AKPN-----SFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNC 455
PN + +YS AG RDR E ++ F LK++ G+ PD+ YN+M+ + K
Sbjct: 464 IAPNIVACNASLYSLAKAG-RDR-EAKQIFYGLKDI---GLVPDSVTYNMMMKCYSKVGE 518
Query: 456 LHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
+ A+ M+ G EPD I N+LI+ +K R D A ++F M+E P TYN
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
++ LG+ + ++ L M +G PN +T+ TL D ++ A++ L
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML------- 631
Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
F++M G P N++I ++ + EA MK+ + PD VT TL+
Sbjct: 632 ---FKMMDM-GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686
Query: 636 LIR---VDKFHKVFSSYLF 651
+++ ++ +K+ +++L+
Sbjct: 687 VVKASLIEDAYKIITNFLY 705
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 232/544 (42%), Gaps = 88/544 (16%)
Query: 166 YSILIHALGRSEKLYEAFLL--SQRQRLTP---LTYNALISACARNDDLEKALNLMSKMR 220
Y+ L+ LG++ K+ EA L Q+ P +T+N L +ND++ AL ++ KM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLYKEIECDKIEL--------DGQLLND 270
G D Y+ +I L + ++ ++ ++ K + D + L L+ D
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 271 ---VIVGFAKAGDASKAMRF-----------LGMAQGVGLSPK----------TATYAAV 306
+I F A F G+ V S + + +
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 307 ITALSNSGRTIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSG 365
I A +FE+ K+ G++P+ YN L+ G ++ ++ A+ V +++ +G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 366 VLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAG----------- 414
+PD TY+ L+DAY +G+ + + KEM + N+ ++ +++G
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 415 ------YRDR-------------------GEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
DR G Q+ + M G P+ YN++I+
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
FGK A A F RM+ EG+ PD T++ L+DC GR D F+E++E G P
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMR-AQGLLPNVVTYTTLVDIYGQSGRFDDAIECL 568
YN++IN LG+ R E+ L M+ ++G+ P++ TY +L+ G +
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG-----------I 1044
Query: 569 EGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVT 628
G+ ++A + ++ GL+P+ N+LI + + A+AV Q M G P+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 629 YTTL 632
Y L
Sbjct: 1105 YEQL 1108
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 12/403 (2%)
Query: 125 PAPL-WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYE------LLYSILIHALGRSE 177
PA L W L+ ++ + + ID A + L + +C + + YS + + +
Sbjct: 711 PANLFWEDLIGSILAE-AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 178 KLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
L+E F + TYN LI D +E A ++ +++ G D Y+ ++ +
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGL 296
++ KID L +LYKE+ + E + N VI G KAG+ A+ + +
Sbjct: 830 YGKSGKIDE--LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 297 SPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEF 356
SP TY +I LS SGR EA+ +FE + + G +P YN L+ G+ K G A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 357 VVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYR 416
+ M + GV PD TYS+L+D GR + KE++ S P+ Y+ I+ G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 417 DRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + EMK+S G+ PD + YN +I G + A ++ + G+EP+
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMIN 518
T+N LI + G+ + A +++ M G+ P T TY + N
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 170/379 (44%), Gaps = 24/379 (6%)
Query: 287 FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYV 346
F +A + L T T ++ AL G+ E VF+ +++ +K T Y + K
Sbjct: 105 FKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLS 164
Query: 347 KMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSF 406
G LK A + + +M G + + ++Y+ LI + A V + M + +P+
Sbjct: 165 VKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 407 IYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRM 466
YS ++ G R + +LKEM++ G++P+ + + + I G+ ++ A RM
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 467 LSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERW 526
EG PD +T+ LID + D A+E+FE+M+ + P TY +++ +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 527 EDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV---------- 576
+ VK+ M G +P+VVT+T LVD ++G F +A + L+ + DQ +
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 577 --NAFRVMRTD------------GLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
RV R D G+KP+ I+ +G+ A + MK G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 623 KPDVVTYTTLMKALIRVDK 641
P++V + +L + +
Sbjct: 465 APNIVACNASLYSLAKAGR 483
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/539 (22%), Positives = 239/539 (44%), Gaps = 27/539 (5%)
Query: 124 VPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA- 182
VP + ++++ S ID A ++S + + N C ++ + LI+ L +++++ EA
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
F+ + +L P +TYN L++ +N +++A+ L M Q G + I ++ + L
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ +++ +L + L+K ++ + D N +I G K G +AM F + + + P
Sbjct: 619 CKNDEVTLAL-KMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYP 675
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEE-LKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
T ++ + + +A + L +P + L+ + + +A
Sbjct: 676 DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735
Query: 358 VSEMERSGVLPDEHTYSLLIDAYA-NAGRWESARIVLKEMEVS-HAKPNSFIYSRILAGY 415
+ +G+ D + + I Y+ AR + ++ +P Y+ ++ G
Sbjct: 736 SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 416 RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
+ + V ++KS+G PD YN ++D +GK + + M + E +T
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 476 ITWNTLIDCHFKCGRYDRAEELFEE-MQERGYFPCTTTYNIMINLLGEQERWEDVKRLLG 534
IT N +I K G D A +L+ + M +R + P TY +I+ L + R + K+L
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 535 NMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLAL 594
M G PN Y L++ +G++G +D A F+ M +G++P
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGE-----------ADAACALFKRMVKEGVRPDLKTY 964
Query: 595 NSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFN 653
+ L++ R E + +KE+GL PDVV Y ++ L K H++ + + FN
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFN 1020
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 174/368 (47%), Gaps = 22/368 (5%)
Query: 84 FTPLLNFLSENSNSESASALASSPSSLNRVEFKLAESYRAVPAPLWHSLLKNLCSSNSSI 143
P++ + +++N A L + V+ KL P ++ L+ L ++ I
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL---------PTYNLLIGGLLEADM-I 801
Query: 144 DLAYAVVSWLQ-KHNLCYSYELLYSILIHALGRSEKLYEAFLL-----SQRQRLTPLTYN 197
++A V +LQ K C Y+ L+ A G+S K+ E F L + +T+N
Sbjct: 802 EIAQDV--FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 198 ALISACARNDDLEKALNLMSKMRQD-GYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+IS + +++ AL+L + D + Y +I L+++ ++ + ++L++ +
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA--KQLFEGM 917
Query: 257 ECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRT 316
+ + N +I GF KAG+A A G+ P TY+ ++ L GR
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 317 IEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS-GVLPDEHTYSL 375
E F+ELKESGL P YN ++ G K L++A + +EM+ S G+ PD +TY+
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 376 LIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSG 435
LI AG E A + E++ + +PN F ++ ++ GY G+ + + V + M + G
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Query: 436 VEPDTHFY 443
P+T Y
Sbjct: 1098 FSPNTGTY 1105
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 196/436 (44%), Gaps = 16/436 (3%)
Query: 203 CARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIE 262
C + DD A +L +M Q ++++ V+ + + NK D ++ LY ++E I
Sbjct: 57 CIKFDD---AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFD--IVIYLYHKMENLGIS 111
Query: 263 LDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAV 322
D +I F + S A+ LG +G P T +++ R EA ++
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 171
Query: 323 FEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYAN 382
+ + G P YN ++ G K L +A V ME+ G+ D TY+ LI +N
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231
Query: 383 AGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
+GRW A +L++M PN ++ ++ + G + KEM V P+
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
YN +I+ F + CL A FD M+S+G PD +T+NTLI K R + +LF EM
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
+G TYN +I+ + + +++ M G+ P++VTY L+D +G+ +
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 563 DAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGL 622
A+ +E L ++ + N +I + EA+ + + + G+
Sbjct: 412 KALVMVEDLQKSEMDV-----------DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 623 KPDVVTYTTLMKALIR 638
KPD + Y T++ L R
Sbjct: 461 KPDAIAYITMISGLCR 476
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 11/418 (2%)
Query: 147 YAVVSWL--QKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNA 198
+ +V +L + NL S++L ++ILIH R +L A L + R + +T +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 199 LISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIEC 258
L++ + + ++A++L+ M G+ + + Y+ VI L + ++++L +++ +E
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL--EVFYCMEK 212
Query: 259 DKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIE 318
I D N +I G + +G + A R L + P + A+I G +E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272
Query: 319 AEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLID 378
A +++E+ + P YN+L+ G+ G L DA+++ M G PD TY+ LI
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 379 AYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
+ + R E + EM ++F Y+ ++ GY G+ +V M GV P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELF 498
D YN+++D + A+ + + ++ D IT+N +I + + A LF
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 499 EEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYT-TLVDIY 555
+ +G P Y MI+ L + + +L M+ G +P+ Y TL D Y
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 14/333 (4%)
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
+A ++F E+ +S P + +L KM ++ +ME G+ D +++++LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
+ R A +L +M +P+ +L G+ +Q ++ M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
P+ YN +I+ K L++A+ F M +GI D +T+NTLI GR+ A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+M +R P + +I+ ++ + + L M + ++PNV TY +L++ +
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF-- 299
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
C+ G A F +M + G P + N+LI F + +R + + M
Sbjct: 300 ---------CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFH---KVFS 647
GL D TY TL+ + K + KVF+
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 228/518 (44%), Gaps = 27/518 (5%)
Query: 155 KHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARNDDL 209
KH+ Y +Y++LI L + +++ +A L +RL P +TYN LI + +
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
EK+ + +M+ D I ++ +++ L + ++ + + + KE++ D +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA--ENVLKEMKDLGFVPDAFTFS 323
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+ G++ A A+ A G+ T + ++ AL G+ +AE +
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
GL P YN ++ GY + G L A + ME+ G+ PD Y+ LI + G E+A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+ +M++ P+ Y+ ++ GY + E+ + F +LKEM+ +G P+ Y +I+
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
K + L A M G+ P +N LID G+ + A +EM ++G
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
TYN +I+ L + + + LL + +GL P+V TY +L+ YG +G I E
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 570 GLSDQAVNAF--------------------RVMRTDGLKPSNLALNSLINAFGEDQRDAE 609
+ + R+ LKP L N +++ + +
Sbjct: 624 EMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 610 AFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
AF + + M E + D TY +L+ ++V K +V S
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 232/514 (45%), Gaps = 31/514 (6%)
Query: 146 AYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQRLTPLT--YNALISAC 203
A+++ S KH+ Y LL S+L++ + + F + + + P + L+
Sbjct: 98 AFSLSSPSLKHDFSY---LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 204 ARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIEL 263
+ +N+ + + + Y IQ+ + + + L +L+ ++ D+I
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL--ELFNRMKHDRIYP 212
Query: 264 DGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
+ N +I G K + A + L P TY +I +G ++ V
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
E +K ++P +N LLKG K G ++DAE V+ EM+ G +PD T+S+L D Y++
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 384 GRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFY 443
+ E+A V + S K N++ S +L G+ ++ ++L + G+ P+ Y
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 444 NVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQE 503
N MID + + L A + M +G++PD + +N LI + G + AE+ +M+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 504 RGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDD 563
+G P TYNI+I G + ++ +L M G +PNVV+Y TL++ + + +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 564 AIECLEGLSDQAV---------------------NAFRV---MRTDGLKPSNLALNSLIN 599
A + D+ V +AFR M G++ + + N+LI+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 600 AFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
+ +EA +L + GLKPDV TY +L+
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 6/347 (1%)
Query: 195 TYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYK 254
TYN LI R + +K +++ +M +G + ++Y +I L + +K+ + Q + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA--QIVKR 518
Query: 255 EIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSG 314
++E + ++ N +I G G A RF G+ TY +I LS +G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 315 RTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+ EAE + E+ GLKP YN+L+ GY G ++ + EM+RSG+ P TY
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
LLI G + R+ EM + KP+ +Y+ +L Y G+ ++ F + K+M
Sbjct: 639 LLISLCTKEGIELTERL-FGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
+ D YN +I K L + D M + +EP+ T+N ++ H + Y A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGL 541
+ EMQE+G+ N +++ L E+ R ++ + ++ M + L
Sbjct: 755 YVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 221/504 (43%), Gaps = 87/504 (17%)
Query: 152 WLQKHNLCYSYELLYSILIHALGRS---EKLYEAF--LLSQRQRLTPLTYNALISACARN 206
++Q+ C E +Y+I+I LGR +K E F + SQ + +Y ALI+A RN
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 207 DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQ 266
E +L L+ +M+ + + Y+ VI + R +D L L+ E+ +
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGG-LDWEGLLGLFAEMRHE------- 241
Query: 267 LLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEEL 326
G+ P TY +++A + G EAE VF +
Sbjct: 242 ----------------------------GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 327 KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRW 386
+ G+ P Y+ L++ + K+ L+ ++ EM G LPD +Y++L++AYA +G
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 387 ESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVM 446
+ A V +M+ + PN+ YS +L + G + Q+ EMKSS +PD YN++
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
I+ FG+ + F M+ E IEPD T+ +I F CG+ E
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII---FACGKGGLHE----------- 439
Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
D +++L M A ++P+ YT +++ +GQ+
Sbjct: 440 ---------------------DARKILQYMTANDIVPSSKAYTGVIEAFGQA-------- 470
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
L ++A+ AF M G PS +SL+ +F E+ A+L + ++G+ +
Sbjct: 471 ---ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 627 VTYTTLMKALIRVDKFHKVFSSYL 650
T+ ++A + KF + +Y+
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYV 551
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 29/400 (7%)
Query: 268 LND---VIVGFAKAGDASKAMR-FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVF 323
LND V FA GD +++R F M + + P Y +I+ L G + VF
Sbjct: 105 LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 324 EELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANA 383
+E+ G+ +Y AL+ Y + G + + ++ M+ + P TY+ +I+A A
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 384 G-RWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHF 442
G WE + EM +P+ Y+ +L+ RG V + M G+ PD
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 443 YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502
Y+ +++TFGK L M S G PD ++N L++ + K G A +F +MQ
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 503 ERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFD 562
G P TY++++NL G+ R++DV++L M++ P+ TY L++++G+ G F
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 563 DAI--------ECLE----------------GLSDQAVNAFRVMRTDGLKPSNLALNSLI 598
+ + E +E GL + A + M + + PS+ A +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 599 NAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
AFG+ EA M E G P + T+ +L+ + R
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 210/457 (45%), Gaps = 40/457 (8%)
Query: 166 YSILIHALGRSEKLYEAFLLSQR---QRLTP--LTYNALISACARND-DLEKALNLMSKM 219
Y+ LI+A GR+ + + L R ++++P LTYN +I+ACAR D E L L ++M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKID---------------------SSLLQKLYKEIEC 258
R +G D + Y+ ++ + D S L++ K
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 259 DKI-ELDGQL-----------LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
+K+ +L G++ N ++ +AK+G +AM Q G +P TY+ +
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
+ SGR + +F E+K S P YN L++ + + GY K+ + +M +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
PD TY +I A G E AR +L+ M + P+S Y+ ++ + ++
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
M G P ++ ++ +F + + + A R++ GI + T+N I+ +
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
+ G+++ A + + +M++ P T ++++ ++ + M+A +LP+++
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 547 TYTTLVDIYGQSGRFDDAIECLEG-LSDQAVNAFRVM 582
Y ++ +YG++ R+DD E LE LS++ N +V+
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 170/395 (43%), Gaps = 15/395 (3%)
Query: 123 AVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRS---EKL 179
++P +++L + + SI A V +Q C YS+L++ G+S + +
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDV 371
Query: 180 YEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQS 237
+ FL + P TYN LI ++ + L M ++ D Y +I +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 238 LTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLS 297
+ + + +K+ + + + I + VI F +A +A+ VG +
Sbjct: 432 CGKGGLHEDA--RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P T+ +++ + + G E+EA+ L +SG+ +NA ++ Y + G ++A
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ME+S PDE T ++ Y+ A + R +EM+ S P+ Y +LA Y
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMI----DTFGKYNCLHHAMAAFDRMLSEGIEP 473
W ++L+EM S+ V MI D + + + + D++ SEG
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVL---DKLNSEGCGL 666
Query: 474 DTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
+N L+D + G+ +RA + E +RG FP
Sbjct: 667 GIRFYNALLDALWWLGQKERAARVLNEATKRGLFP 701
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 204/447 (45%), Gaps = 14/447 (3%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKE 255
YN +++ + L+ +KM G D ++++I++L R +++ ++L + ++
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL--MLED 214
Query: 256 IECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGR 315
+ + D + V+ G+ + GD A+R G S + ++ GR
Sbjct: 215 MPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 316 TIEAEAVFEEL-KESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYS 374
+A +E+ + G P +N L+ G K G++K A ++ M + G PD +TY+
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 375 LLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSS 434
+I G + A VL +M PN+ Y+ +++ + + ++ + + S
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 435 GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRA 494
G+ PD +N +I AM F+ M S+G EPD T+N LID G+ D A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 495 EELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDI 554
+ ++M+ G TYN +I+ + + + + + M G+ N VTY TL+D
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 555 YGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVL 614
+S R +DA + L DQ M +G KP NSL+ F +A ++
Sbjct: 515 LCKSRRVEDAAQ----LMDQ-------MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 615 QYMKENGLKPDVVTYTTLMKALIRVDK 641
Q M NG +PD+VTY TL+ L + +
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 197/434 (45%), Gaps = 28/434 (6%)
Query: 231 YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG- 289
Y ++ L R+ D ++K+ ++++ + E+ +I +A+ + + +
Sbjct: 86 YEEILLRLGRSGSFDD--MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
M GL P T Y ++ L + E ++ G+KP +N L+K +
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYS 409
L+ A ++ +M G++PDE T++ ++ Y G + A + ++M ++ +
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 410 RILAGYRDRGEWQRTFQVLKEMKSS-GVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
I+ G+ G + ++EM + G PD + +N +++ K + HA+ D ML
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 469 EGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWED 528
EG +PD T+N++I K G A E+ ++M R P T TYN +I+ L ++ + E+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 529 VKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE---------------------- 566
L + ++G+LP+V T+ +L+ + A+E
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 567 --CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKP 624
C +G D+A+N + M G S + N+LI+ F + + EA + M+ +G+
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 625 DVVTYTTLMKALIR 638
+ VTY TL+ L +
Sbjct: 504 NSVTYNTLIDGLCK 517
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 202/456 (44%), Gaps = 34/456 (7%)
Query: 194 LTYNALISACARNDDLEKALNLMSKM-RQDGYHCDFINYSLVIQSLTRTNKIDSS----- 247
++ N ++ + +E ALN + +M QDG+ D ++ ++ L + + +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 248 -LLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
+LQ+ Y + D N VI G K G+ +A+ L SP T TY +
Sbjct: 320 VMLQEGY--------DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I+ L + EA + L G+ P +N+L++G + A + EM G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
PDE TY++LID+ + G+ + A +LK+ME+S + Y+ ++ G+ + + +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
+ EM+ GV ++ YN +ID K + A D+M+ EG +PD T+N+L+
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
+ G +A ++ + M G P TY +I+ L + R E +LL +++ +G+
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSN-----LALNSLINAF 601
Y ++ G F + + +A+N FR M P + + L N
Sbjct: 612 AYNPVI-----QGLFR------KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 602 GEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
G + EA L + E G P+ + L + L+
Sbjct: 661 GPIR---EAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 84/435 (19%)
Query: 280 DASKAMRFLGMA-QGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES--------- 329
D S A+R +A + SP+ A Y ++ L SG + + + E++K S
Sbjct: 62 DDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121
Query: 330 ---------------------------GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
GLKP T YN +L V LK E ++M
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
G+ PD T+++LI A A + A ++L++M P+ ++ ++ GY + G+
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 423 RTFQVLKEM------------------------------------KSSGVEPDTHFYNVM 446
++ ++M G PD + +N +
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 447 IDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGY 506
++ K + HA+ D ML EG +PD T+N++I K G A E+ ++M R
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 507 FPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIE 566
P T TYN +I+ L ++ + E+ L + ++G+LP+V T+ +L+
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL----------- 410
Query: 567 CLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDV 626
CL A+ F MR+ G +P N LI++ + EA +L+ M+ +G V
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 627 VTYTTLMKALIRVDK 641
+TY TL+ + +K
Sbjct: 471 ITYNTLIDGFCKANK 485
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAF----- 183
+++L+ C +N + + A + ++ H + + + Y+ LI L +S ++ +A
Sbjct: 473 YNTLIDGFCKANKTRE-AEEIFDEMEVHGVSRN-SVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 184 LLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ + Q+ TYN+L++ R D++KA +++ M +G D + Y +I L + +
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMR-FLGMAQGVGLSPKTAT 302
++ + KL + I+ I L N VI G + ++A+ F M + P +
Sbjct: 591 VEVA--SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 303 YAAVITALSNSGRTI-EAEAVFEELKESGLKPRTKAYNALLKGYVKM 348
Y V L N G I EA EL E G P + L +G + +
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL 695
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 209/470 (44%), Gaps = 61/470 (12%)
Query: 228 FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRF 287
+++S ++ RT + + L+ K++E + I + LN +I F + A
Sbjct: 88 LVDFSRFFSAIARTKQFN--LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 288 LGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVK 347
LG +G P T T+ +I L G+ EA + + + E+G +P YN+++ G +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 348 MGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI 407
G A ++ +ME V D TYS +ID+ G ++A + KEME K +
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 408 YSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRML 467
Y+ ++ G G+W +LK+M S + P+ +NV++D F K L A + M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 468 SEGIEPDTITWNTLIDCHF------------------KCG-----------------RYD 492
+ GI P+ IT+NTL+D + KC R D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
++F + +RG TY+I++ + + + + L M + G+LP+V+TY L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 553 DIYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLK 588
D +G+ + A+E C G + A N F + G+K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 589 PSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIR 638
P+ + +I+ + +EA +L+ M+E+G P+ TY TL++A +R
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 14/422 (3%)
Query: 146 AYAVVSWLQKHNLCYSYE---LLYSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYN 197
AY+V+ + K YE ++ LI L K+ EA +L R + +TYN
Sbjct: 142 AYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 198 ALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIE 257
++++ R+ D AL+L+ KM + D YS +I SL R ID+++ L+KE+E
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI--SLFKEME 255
Query: 258 CDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTI 317
I+ N ++ G KAG + L + P T+ ++ G+
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 318 EAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLI 377
EA +++E+ G+ P YN L+ GY L +A ++ M R+ PD T++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 378 DAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVE 437
Y R + V + + N+ YS ++ G+ G+ + ++ +EM S GV
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
PD Y +++D L A+ F+ + ++ + + T+I+ K G+ + A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
F + +G P TY +MI+ L ++ + LL M G PN TY TL+ + +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 558 SG 559
G
Sbjct: 556 DG 557
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 216/476 (45%), Gaps = 18/476 (3%)
Query: 167 SILIHALGRSEKLYEAF-LLSQRQRL----TPLTYNALISACARNDDLEKALNLMSKMRQ 221
+I+I+ R K A+ +L + +L T+N LI + +A+ L+ +M +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 222 DGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDA 281
+G D + Y+ ++ + R+ D+SL L +++E ++ D + +I + G
Sbjct: 187 NGCQPDVVTYNSIVNGICRSG--DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 282 SKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNAL 341
A+ + G+ TY +++ L +G+ + + +++ + P +N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 342 LKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHA 401
L +VK G L++A + EM G+ P+ TY+ L+D Y R A +L M +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 402 KPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMA 461
P+ ++ ++ GY +V + + G+ + Y++++ F + + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 462 AFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLG 521
F M+S G+ PD +T+ L+D G+ ++A E+FE++Q+ Y +I +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 522 EQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRV 581
+ + ED L ++ +G+ PNV+TYT ++ SG C +G +A R
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI-----SGL------CKKGSLSEANILLRK 533
Query: 582 MRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI 637
M DG P++ N+LI A D + +++ MK G D + ++ L+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 11/404 (2%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLL--- 185
++S++ +C S + LA ++ +++ N+ + YS +I +L R + A L
Sbjct: 196 YNSIVNGICRSGDT-SLALDLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 186 --SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
++ + + +TYN+L+ + L+ M + I +++++ + K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
+ + +LYKE+ I + N ++ G+ S+A L + SP T+
Sbjct: 314 LQEA--NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
++I R + VF + + GL Y+ L++G+ + G +K AE + EM
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR 423
GVLPD TY +L+D + G+ E A + ++++ S +Y+ I+ G G+ +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 424 TFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLID 483
+ + + GV+P+ Y VMI K L A +M +G P+ T+NTLI
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 484 CHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLL--GEQER 525
H + G + +L EEM+ G+ ++ ++I++L GE ++
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 221/445 (49%), Gaps = 21/445 (4%)
Query: 192 TPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQK 251
T L ++ L+ +R ++ +L ++ KM+ + +Y+ V+ T+K +
Sbjct: 165 TGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDK-----MWD 219
Query: 252 LYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALS 311
+YKEI+ DK E + V+ G + A+ FL ++ + P ++ ++++
Sbjct: 220 VYKEIK-DKNE---HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275
Query: 312 NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371
G A++ F + + GL P ++N L+ G +G + +A + S+M + GV PD
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 335
Query: 372 TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431
TY++L + G A V+++M P+ Y+ +L G G +LK+M
Sbjct: 336 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 395
Query: 432 KSSGVEPDTHF-YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGR 490
S G E ++ +VM+ K + A++ F++M ++G+ PD + ++ +I K G+
Sbjct: 396 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 455
Query: 491 YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550
+D A L++EM ++ P + T+ ++ L ++ + + LL ++ + G ++V Y
Sbjct: 456 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 515
Query: 551 LVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEA 610
++D Y +SG C+E +A+ F+V+ G+ PS NSLI + + Q AEA
Sbjct: 516 VIDGYAKSG-------CIE----EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 564
Query: 611 FAVLQYMKENGLKPDVVTYTTLMKA 635
+L +K GL P VV+YTTLM A
Sbjct: 565 RKILDVIKLYGLAPSVVSYTTLMDA 589
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 200/476 (42%), Gaps = 66/476 (13%)
Query: 230 NYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLG 289
YS V+ L R K++ ++L + E I N ++ G+ K G A F
Sbjct: 231 TYSTVVDGLCRQQKLEDAVL--FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 288
Query: 290 MAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMG 349
GL P ++ +I L G EA + ++ + G++P + YN L KG+ +G
Sbjct: 289 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 350 YLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFI-Y 408
+ A V+ +M G+ PD TY++L+ G + ++LK+M + NS I
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 408
Query: 409 SRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468
S +L+G G + +MK+ G+ PD Y+++I K A+ +D M
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 468
Query: 469 EGIEP-----------------------------------DTITWNTLIDCHFKCGRYDR 493
+ I P D + +N +ID + K G +
Sbjct: 469 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 528
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A ELF+ + E G P T+N +I + + + +++L ++ GL P+VV+YTTL+D
Sbjct: 529 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 588
Query: 554 IYGQSGRFDDAIECLEGLSDQAVNAFRV-MRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
Y G + ++++ R M+ +G+ P+N+ + + +
Sbjct: 589 AYANCG------------NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 636
Query: 613 VLQY------------MKENGLKPDVVTYTTLMKALIRVDKFHKVFSSYLFFNIYK 656
VL+ M+ G+ PD +TY T+++ L RV F +F I K
Sbjct: 637 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF---VFLEIMK 689
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 220/523 (42%), Gaps = 66/523 (12%)
Query: 166 YSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNALISACARNDDLEKALNLMSKMR 220
YS ++ L R +KL +A L S+ + + P +++N+++S + ++ A + +
Sbjct: 232 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 291
Query: 221 QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280
+ G +++++I L I +L +L ++ +E D N + GF G
Sbjct: 292 KCGLVPSVYSHNILINGLCLVGSIAEAL--ELASDMNKHGVEPDSVTYNILAKGFHLLGM 349
Query: 281 ASKAMRFLGMAQGVGLSPKTATY------------------------------------A 304
S A + GLSP TY +
Sbjct: 350 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 305 AVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERS 364
+++ L +GR EA ++F ++K GL P AY+ ++ G K+G A ++ EM
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 365 GVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRT 424
+LP+ T+ L+ G AR +L + S + +Y+ ++ GY G +
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 425 FQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDC 484
++ K + +G+ P +N +I + K + A D + G+ P +++ TL+D
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589
Query: 485 HFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGE-----------QER-WEDVKRL 532
+ CG +EL EM+ G P TY+++ L +ER +E K+
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649
Query: 533 LGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNL 592
L +M ++G+ P+ +TY T++ + A LE +M++ L S+
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE-----------IMKSRNLDASSA 698
Query: 593 ALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
N LI++ +A + + ++E + YTTL+KA
Sbjct: 699 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 51/397 (12%)
Query: 197 NALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEI 256
+ ++S + +++AL+L ++M+ DG D + YS+VI L + K D +L LY E+
Sbjct: 409 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW--LYDEM 466
Query: 257 ECDK----------------------IE--------------LDGQLLNDVIVGFAKAGD 280
CDK +E LD L N VI G+AK+G
Sbjct: 467 -CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 525
Query: 281 ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340
+A+ + G++P AT+ ++I + EA + + +K GL P +Y
Sbjct: 526 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585
Query: 341 LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKE----- 395
L+ Y G K + + EM+ G+ P TYS++ + E+ VL+E
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Query: 396 -------MEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
ME P+ Y+ I+ F L+ MKS ++ + YN++ID
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705
Query: 449 TFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
+ Y + A + + + + + TLI H G + A +LF ++ RG+
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765
Query: 509 CTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNV 545
Y+ +IN L + + K M +QG+ P++
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 132 LLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELL-YSILIHALGRSEKLYEAFLLSQR-- 188
+L LC + ID A ++ + ++ L S +L+ YSI+IH L + K A L
Sbjct: 411 MLSGLCKTGR-IDEALSLFNQMKADGL--SPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 467
Query: 189 -QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKID 245
+R+ P T+ AL+ + L +A +L+ + G D + Y++VI ++ I+
Sbjct: 468 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 527
Query: 246 SSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAA 305
+L +L+K + I N +I G+ K + ++A + L + + GL+P +Y
Sbjct: 528 EAL--ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 585
Query: 306 VITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSE----- 360
++ A +N G T + + E+K G+ P Y+ + KG + ++ V+ E
Sbjct: 586 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 645
Query: 361 -------MERSGVLPDEHTYSLLIDAYANAGRWESARIVL-----KEMEVSHA------- 401
ME G+ PD+ TY+ +I A + L + ++ S A
Sbjct: 646 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 705
Query: 402 ---------KPNSFIYS--------------RILAGYRDRGEWQRTFQVLKEMKSSGVEP 438
K +SFIYS ++ + +G+ + ++ ++ G
Sbjct: 706 SLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNV 765
Query: 439 DTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPD 474
Y+ +I+ + + ++ + F MLS+GI PD
Sbjct: 766 SIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 60/325 (18%)
Query: 322 VFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYA 381
+ +++K+ L T++YN++L + + + D V E++ +EHTYS ++D
Sbjct: 188 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIKD----KNEHTYSTVVDGLC 240
Query: 382 NAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTH 441
+ E A + L+ E P+ ++ I++GY G
Sbjct: 241 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLG---------------------- 278
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
+D A + F +L G+ P + N LI+ G A EL +M
Sbjct: 279 ----FVDM---------AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 325
Query: 502 QERGYFPCTTTYNIM---INLLGE-QERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
+ G P + TYNI+ +LLG WE ++ +M +GL P+V+TYT L+ Q
Sbjct: 326 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR----DMLDKGLSPDVITYTILLCGQCQ 381
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
G D + L+ D F + + + P ++ L+ L R EA ++ M
Sbjct: 382 LGNIDMGLVLLK---DMLSRGFEL---NSIIPCSVMLSGLCKT----GRIDEALSLFNQM 431
Query: 618 KENGLKPDVVTYTTLMKALIRVDKF 642
K +GL PD+V Y+ ++ L ++ KF
Sbjct: 432 KADGLSPDLVAYSIVIHGLCKLGKF 456
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 56/261 (21%)
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
H+ ++ + S +LAG QR F+ L+ + ++ + ++ ++F K+
Sbjct: 116 HSSFSTLLVSHVLAG-------QRRFKELQVILEQLLQEEGTLCELLSNSFRKW------ 162
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
E + W+ L+ + D + + ++M+++ T +YN ++
Sbjct: 163 ------------ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH 210
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-------------- 565
E ++ DV + + + N TY+T+VD + + +DA+
Sbjct: 211 FRETDKMWDVYKEIKD-------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 263
Query: 566 ----------ECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQ 615
C G D A + F + GL PS + N LIN AEA +
Sbjct: 264 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 323
Query: 616 YMKENGLKPDVVTYTTLMKAL 636
M ++G++PD VTY L K
Sbjct: 324 DMNKHGVEPDSVTYNILAKGF 344
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 240/543 (44%), Gaps = 28/543 (5%)
Query: 98 ESASALASSPSSLNRVEF-KLAES---YRAVPAPLWHSLLKNLCSSN--SSIDLAYAVVS 151
E++ L S S L VEF KL S Y L++ ++ L SN D +++
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILD 160
Query: 152 WLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQRQ--RLTPLTYNALISACARNDDL 209
+ K N+ + + +ILI G +E L L ++ ++ TY L+ A R+ D
Sbjct: 161 SMVKSNVHGNISTV-NILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDY 219
Query: 210 EKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLN 269
KA ++ ++R+ G+ D Y++++ +L + K +++++++ D
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKA-----CQVFEDMKKRHCRRDEYTYT 274
Query: 270 DVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES 329
+I + G +A+ GL+ Y ++ L+ +A VF + E+
Sbjct: 275 IMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 330 GLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESA 389
G +P Y+ LL V G L + VV E S + YS L+ + G A
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVV---EISKRYMTQGIYSYLVRTLSKLGHVSEA 391
Query: 390 RIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDT 449
+ +M K Y +L G+ ++L ++ GV DT YN +
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 450 FGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPC 509
GK + H F++M +G PD T+N LI + G D A +FEE++ P
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 510 TTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLE 569
+YN +IN LG+ ++ M+ +GL P+VVTY+TL++ +G++ R +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE------- 564
Query: 570 GLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTY 629
A + F M G +P+ + N L++ ++ R AEA + MK+ GL PD +TY
Sbjct: 565 ----MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Query: 630 TTL 632
T L
Sbjct: 621 TVL 623
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 206/463 (44%), Gaps = 31/463 (6%)
Query: 193 PLTYNALISACARN---DDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLL 249
P YN +I +R+ D ++ +++ M + H + +++I T + L
Sbjct: 133 PFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL- 191
Query: 250 QKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITA 309
+L K+ + ++++ ++ + ++ D SKA + G Y ++ A
Sbjct: 192 -RLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPD 369
L+ + + VFE++K+ + Y +++ ++G +A + +EM G+ +
Sbjct: 248 LAKDEKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304
Query: 370 EHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQR---TFQ 426
Y+ L+ A + A V M + +PN + YS +L G+ R +
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
+ K + G+ Y+ ++ T K + A F M S ++ + ++ ++++
Sbjct: 365 ISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
G+ A E+ ++ E+G T YN + + LG+ ++ + L M+ G P++
Sbjct: 419 GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF 478
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
TY L+ +G+ G D+AI E L R+D KP ++ NSLIN G++
Sbjct: 479 TYNILIASFGRVGEVDEAINIFEELE----------RSD-CKPDIISYNSLINCLGKNGD 527
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
EA + M+E GL PDVVTY+TLM+ + ++ +S +
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 232/512 (45%), Gaps = 23/512 (4%)
Query: 146 AYAVVSWLQKHNLCYS-YELLYSILIHALGRSEKLYEAFLL---SQRQRLTP--LTYNAL 199
A+ V++ + K ++ Y ++IL+ L R+ + +A L +R L P +YN +
Sbjct: 126 AFGVLALMLKRGFAFNVYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTV 183
Query: 200 ISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECD 259
I +LEKAL L ++M+ G + + ++I + + K+D ++ KE++
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM--GFLKEMKFM 241
Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
+E D + +I GF G+ + G SP TY +I G+ EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
+FE + E G++P Y L+ G +G K+A +++ M P+ TY+++I+
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM--KSSGVE 437
G A +++ M+ +P++ Y+ +L G +G+ ++L M SS +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 438 PDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEEL 497
PD YN +I K N LH A+ +D ++ + D +T N L++ K G ++A EL
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 498 FEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQ 557
++++ + + TY MI+ + K LL MR L P+V Y L+
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL-- 539
Query: 558 SGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYM 617
C EG DQA F M+ D P ++ N +I+ + A ++L M
Sbjct: 540 ---------CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 618 KENGLKPDVVTYTTLMKALIRVDKFHKVFSSY 649
GL PD+ TY+ L+ +++ + S +
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 165/369 (44%), Gaps = 20/369 (5%)
Query: 285 MRFLGMAQGV-------GLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
MR G A GV G + + ++ L + +A ++ E++ + L P +
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN +++G+ + L+ A + +EM+ SG T+ +LIDA+ AG+ + A LKEM+
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
+ + +Y+ ++ G+ D GE R + E+ G P YN +I F K L
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A F+ M+ G+ P+ T+ LID G+ A +L M E+ P TYNI+I
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVN 577
N L + D ++ M+ + P+ +TY L+ C +G D+A
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL-----------CAKGDLDEASK 408
Query: 578 AFRVMRTDG--LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
+M D P ++ N+LI+ ++ R +A + + E D VT L+ +
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 636 LIRVDKFHK 644
++ +K
Sbjct: 469 TLKAGDVNK 477
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 13/352 (3%)
Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+ LI + +L EA F++ + R TY LI ++AL L++ M
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 221 QDGYHCDFINYSLVIQSLTRTNKI-DSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+ + + Y+++I L + + D+ + +L K+ + D N ++ G G
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK---RRTRPDNITYNILLGGLCAKG 401
Query: 280 DASKAMR--FLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKES-GLKPRTK 336
D +A + +L + P +Y A+I L R +A +++ L E G R
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 337 AYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEM 396
N LL +K G + A + ++ S ++ + TY+ +ID + G A+ +L +M
Sbjct: 462 T-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 397 EVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCL 456
VS +P+ F Y+ +L+ G + +++ +EM+ PD +N+MID K +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 457 HHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFP 508
A + M G+ PD T++ LI+ K G D A F++M + G+ P
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 16/302 (5%)
Query: 166 YSILIHALGRSEKLYEA-----FLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMR 220
Y+I+I+ L + + +A + +R R +TYN L+ DL++A L+ M
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 221 QDGYHCD--FINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFA-K 277
+D + D I+Y+ +I L + N++ +L +Y ++ +K+ ++ ++++ K
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQAL--DIY-DLLVEKLGAGDRVTTNILLNSTLK 471
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
AGD +KAM + + TY A+I +G A+ + +++ S L+P
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN LL K G L A + EM+R PD +++++ID AG +SA +L M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
+ P+ F YS+++ + G +M SG EPD H + D+ KY C+
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH----ICDSVLKY-CIS 646
Query: 458 HA 459
Sbjct: 647 QG 648
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 169/406 (41%), Gaps = 5/406 (1%)
Query: 173 LGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYS 232
L R + L++ +L + +TYN LI + L++A + M + G + Y+
Sbjct: 263 LDRGKALFDE-VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 233 LVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQ 292
+I L K +L Q L IE D+ E + N +I K G + A+ + + +
Sbjct: 322 GLIDGLCGVGKTKEAL-QLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 293 GVGLSPKTATYAAVITALSNSGRTIEA-EAVFEELKESG-LKPRTKAYNALLKGYVKMGY 350
P TY ++ L G EA + ++ LK+S P +YNAL+ G K
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L A + + D T ++L+++ AG A + K++ S NS Y+
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ G+ G +L +M+ S ++P YN ++ + K L A F+ M +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
PD +++N +ID K G AE L M G P TY+ +IN + ++
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAV 576
M G P+ +++ G D E ++ L D+ +
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 150/330 (45%), Gaps = 11/330 (3%)
Query: 126 APLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEA--- 182
A ++ ++ LC D A +V ++K + Y+IL+ L L EA
Sbjct: 352 AVTYNIIINKLCKDGLVAD-AVEIVELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKL 409
Query: 183 --FLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSL 238
+L P ++YNALI + + L +AL++ + + D + ++++ S
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 239 TRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSP 298
+ ++ ++ +L+K+I KI + +I GF K G + A L + L P
Sbjct: 470 LKAGDVNKAM--ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 299 KTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVV 358
Y ++++L G +A +FEE++ P ++N ++ G +K G +K AE ++
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 359 SEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDR 418
M R+G+ PD TYS LI+ + G + A +M S +P++ I +L +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 419 GEWQRTFQVLKEMKSSGVEPDTHFYNVMID 448
GE + +++K++ + D ++D
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 459 AMAAFDRMLSEGIEPDTITWNTLID--C-HFKCGRYDRAEELFEEMQERGYFPCTTTYNI 515
A ML G + N L+ C + +CG+ A L EM+ P +YN
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNT 182
Query: 516 MINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQA 575
+I E + E L M+ G ++VT+ L+D + ++G+ D +A
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD-----------EA 231
Query: 576 VNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKA 635
+ + M+ GL+ + SLI F + A+ + E G P +TY TL++
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 636 LIRVDKFHKVFSSYLFF-------NIYKMLSYSG 662
++ + + + F N+Y +Y+G
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVY---TYTG 322
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 213/467 (45%), Gaps = 33/467 (7%)
Query: 196 YNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSL--LQKLY 253
+N L+SA A+ + E ++L +M+ G D YS+ I R +++ +L L K+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
K E D L+ ++ G+ + S A+ + +G P T T+ +I L
Sbjct: 146 KL----GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
+ EA A+ +++ + G +P Y ++ G K G + A ++++ME + + + +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
+ +ID+ E A + EME +PN Y+ ++ + G W ++L M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
+ P+ +N +ID F K L A + M+ I+PDTIT+N LI+ R D
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVD 553
A+++F+ M + P TYN +IN + +R ED L M +GL+ N VTYTT++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 554 IYGQSGRFDDAIE------------------------CLEGLSDQAVNAFRVMRTDGLKP 589
+ Q+G D A C G D A+ F+ ++ ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 590 SNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
+ N++I + + EA+ + + +KPDVVTY T++ L
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 222/500 (44%), Gaps = 39/500 (7%)
Query: 162 YELLYSI--LIHALGRSEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKM 219
+EL+ S+ + LG S LY TY+ I+ R L AL +++KM
Sbjct: 99 FELVISLGEQMQTLGISHDLY--------------TYSIFINCFCRRSQLSLALAVLAKM 144
Query: 220 RQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAG 279
+ GY D + S ++ + +I ++ L ++ + D +I G
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAV--ALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 280 DASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYN 339
AS+A+ + G P TY V+ L G A + +++ + +K +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 340 ALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVS 399
++ K +++ A + +EME G+ P+ TY+ LI+ N GRW A +L M
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 400 HAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHA 459
PN ++ ++ + G+ ++ +EM ++PDT YN++I+ F +N L A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 460 MAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINL 519
F M+S+ P+ T+NTLI+ KC R + ELF EM +RG T TY +I
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 520 LGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAI-------------- 565
+ + + + M + + +++TY+ L+ G+ D A+
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 566 -----ECLEGL--SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMK 618
+EG+ + + A+ + + +KP + N++I+ + EA + + MK
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 619 ENGLKPDVVTYTTLMKALIR 638
E+G P+ TY TL++A +R
Sbjct: 563 EDGTLPNSGTYNTLIRANLR 582
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 248/552 (44%), Gaps = 31/552 (5%)
Query: 103 LASSPSSLNRVEFKLAESYRAVPAPLWH-----SLLKNLCSSNSSIDLAYAVVSWLQKHN 157
L S+ + +N+ E ++ + + H S+ N S + LA AV++ + K
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-- 146
Query: 158 LCYSYELL-YSILIHALGRSEKLYEAFLLSQRQ-----RLTPLTYNALISACARNDDLEK 211
L Y +++ S L++ S+++ +A L + + T+ LI ++ +
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 212 ALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDV 271
A+ L+ +M Q G D + Y V+ L + ID +L L ++E +I+ + + N +
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL--NLLNKMEAARIKANVVIFNTI 264
Query: 272 IVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGL 331
I K A+ + G+ P TY ++I L N GR +A + + E +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 332 KPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARI 391
P +NAL+ + K G L +AE + EM + + PD TY+LLI+ + R + A+
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 392 VLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFG 451
+ K M PN Y+ ++ G+ + ++ +EM G+ +T Y +I F
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 452 KYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTT 511
+ A F +M+S + D +T++ L+ G+ D A +F+ +Q+
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 512 TYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGL 571
YN MI + + + + L ++ + P+VVTY T++ SG C + L
Sbjct: 505 IYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMI-----SGL------CSKRL 550
Query: 572 SDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTT 631
+A + FR M+ DG P++ N+LI A D A + +++ M+ +G D T +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 632 LMKALI--RVDK 641
+ L R+DK
Sbjct: 611 VTNMLHDGRLDK 622
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 24/365 (6%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P + +++A++ + ++ E+++ G+ Y+ + + + L A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+++M + G PD T S L++ Y ++ R A ++ +M KP++F ++ ++ G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+ ++ +M G +PD Y +++ K + A+ ++M + I+ + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
+NT+ID K + A +LF EM+ +G P TYN +IN L RW D RLL NM
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIE------------------------CLEGLSD 573
+ + PNVVT+ L+D + + G+ +A + C+ D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 574 QAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLM 633
+A F+ M + P+ N+LIN F + +R + + + M + GL + VTYTT++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 634 KALIR 638
+ +
Sbjct: 441 QGFFQ 445
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 20/343 (5%)
Query: 310 LSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS---EMERSGV 366
LS+ + +A +F ++ +S P +N LL KM E V+S +M+ G+
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF---ELVISLGEQMQTLGI 114
Query: 367 LPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQ 426
D +TYS+ I+ + + A VL +M +P+ S +L GY
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 427 VLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHF 486
++ +M G +PDT + +I +N A+A D+M+ G +PD +T+ T+++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 487 KCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVV 546
K G D A L +M+ +N +I+ L + E L M +G+ PNVV
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 547 TYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQR 606
TY +L++ GR+ DA L + ++ +N P+ + N+LI+AF ++ +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKIN-----------PNVVTFNALIDAFFKEGK 343
Query: 607 DAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
EA + + M + + PD +TY L+ R+D+ ++F
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 503 ERGYFPCTTTYN-IMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
ER + + Y I+ N L + + +D L G+M P++V + L+ + +F
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 562 DDAIECLE-----GLSDQA------VNAF--------------RVMRTDGLKPSNLALNS 596
+ I E G+S +N F ++M+ G +P + L+S
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSS 158
Query: 597 LINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKAL 636
L+N + +R ++A A++ M E G KPD T+TTL+ L
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 32/462 (6%)
Query: 208 DLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQL 267
+L+ A+ L M Q I +S ++ ++ + NK D L+ +++E I +
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD--LVISFGEKMEILGISHNLYT 115
Query: 268 LNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELK 327
N +I F + S A+ LG +G P T +++ + R +A A+ +++
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 328 ESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWE 387
E G KP T + L+ G +A ++ M + G PD TY +++ G +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 388 SARIVLKEMEVSHAKPNSFIYSRI---LAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYN 444
A +L +ME + + N IYS + L YR + F EM++ GV P+ Y+
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT---EMENKGVRPNVITYS 292
Query: 445 VMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQER 504
+I Y A M+ I P+ +T++ LID K G+ +AE+L+EEM +R
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 505 GYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDA 564
P TY+ +IN +R + K++L M + LPNVVTY TL++ + ++ R D
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 565 IECLEGLS------------------------DQAVNAFRVMRTDGLKPSNLALNSLINA 600
+E +S D A F+ M + G+ P+ L N L++
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 601 FGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 642
++ + A+A V +Y++ + ++PD+ TY +++ + + K+
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 2/334 (0%)
Query: 194 LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLY 253
+T+ LI ++ +A+ L+ +M Q G D + Y V+ L + D+ L L
Sbjct: 184 VTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG--DTDLALNLL 241
Query: 254 KEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNS 313
++E KIE + + + VI K A+ + G+ P TY+++I+ L N
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 314 GRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTY 373
GR +A + ++ E + P ++AL+ +VK G L AE + EM + + P+ TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 374 SLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKS 433
S LI+ + R A+ +L+ M PN Y+ ++ G+ + ++ +EM
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 434 SGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDR 493
G+ +T Y +I F + +A F +M+S G+ P+ +T+N L+D K G+ +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 494 AEELFEEMQERGYFPCTTTYNIMINLLGEQERWE 527
A +FE +Q P TYNIMI + + +W+
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 14/352 (3%)
Query: 298 PKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFV 357
P ++ +++A++ + + E+++ G+ YN L+ + + L A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 358 VSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRD 417
+ +M + G PD T + L++ + + R A ++ +M KP++ ++ ++ G
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 418 RGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTIT 477
+ ++ M G +PD Y +++ K A+ ++M + IE + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 478 WNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMR 537
++T+ID K D A LF EM+ +G P TY+ +I+ L RW D RLL +M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 538 AQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSL 597
+ + PN+VT++ L+D + + G+ A + E + ++++ P+ +SL
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID-----------PNIFTYSSL 364
Query: 598 INAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALI---RVDKFHKVF 646
IN F R EA +L+ M P+VVTY TL+ RVDK ++F
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 11/294 (3%)
Query: 351 LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410
L DA + M +S P +S L+ A A +++ ++ME+ N + Y+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 411 ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470
++ + +L +M G EPD N +++ F N + A+A D+M+ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 471 IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530
+PDT+T+ TLI F + A L + M +RG P TY ++N L ++ +
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 531 RLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPS 590
LL M A + NVV Y+T++D + DDA+ N F M G++P+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL-----------NLFTEMENKGVRPN 287
Query: 591 NLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
+ +SLI+ R ++A +L M E + P++VT++ L+ A ++ K K
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 189 QRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNKIDS 246
+++ P +T++ALI A + L KA L +M + + YS +I +++
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 247 SLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAV 306
+ Q L I D + + N +I GF KA K M GL T TY +
Sbjct: 377 AK-QMLELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 307 ITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGV 366
I + A+ VF+++ G+ P YN LL G K G L A V ++RS +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 367 LPDEHTYSLLIDAYANAGRWESARI 391
PD +TY+++I+ AG+W+ I
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGI 519
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 177/382 (46%), Gaps = 11/382 (2%)
Query: 260 KIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEA 319
K+ LD +I G +AG+ K+ L G SP Y +I G +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 320 EAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDA 379
+ +F E+ + GL + Y L+ G K G K + +M+ GV P+ +TY+ +++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 380 YANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPD 439
GR + A V EM N Y+ ++ G + +V+ +MKS G+ P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 440 THFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFE 499
YN +ID F L A++ + S G+ P +T+N L+ + G A ++ +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 500 EMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSG 559
EM+ERG P TY I+I+ + E +L +M GL+P+V TY+ L+ +
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF---- 453
Query: 560 RFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKE 619
C++G ++A F+ M +P+ + N++I + ++ A +L+ M+E
Sbjct: 454 -------CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 620 NGLKPDVVTYTTLMKALIRVDK 641
L P+V +Y +++ L + K
Sbjct: 507 KELAPNVASYRYMIEVLCKERK 528
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 169/356 (47%), Gaps = 8/356 (2%)
Query: 125 PAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHAL---GRSEKLYE 181
P + ++ L + C I+ A + + K L + E Y++LI+ L G ++ +E
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL-VANERTYTVLINGLFKNGVKKQGFE 254
Query: 182 AFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLT 239
+ Q + P TYN +++ ++ + A + +MR+ G C+ + Y+ +I L
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 240 RTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPK 299
R K++ + K+ +++ D I + N +I GF G KA+ + GLSP
Sbjct: 315 REMKLNEA--NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 300 TATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVS 359
TY +++ G T A + +E++E G+KP Y L+ + + ++ A +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 360 EMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRG 419
ME G++PD HTYS+LI + G+ A + K M + +PN IY+ ++ GY G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 420 EWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDT 475
R ++LKEM+ + P+ Y MI+ K A ++M+ GI+P T
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 5/387 (1%)
Query: 160 YSYELLYSILIHALGRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMS 217
YS+ +L A G EK ++ + +P + Y LI C + ++EKA +L
Sbjct: 164 YSFGILIKGCCEA-GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 218 KMRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAK 277
+M + G + Y+++I L + ++Y++++ D + + N V+ K
Sbjct: 223 EMGKLGLVANERTYTVLINGLFKNGVKKQGF--EMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 278 AGDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKA 337
G A + + G+S TY +I L + EA V +++K G+ P
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 338 YNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEME 397
YN L+ G+ +G L A + +++ G+ P TY++L+ + G A ++KEME
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 398 VSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLH 457
KP+ Y+ ++ + ++ Q+ M+ G+ PD H Y+V+I F ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 458 HAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMI 517
A F M+ + EP+ + +NT+I + K G RA +L +EM+E+ P +Y MI
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 518 NLLGEQERWEDVKRLLGNMRAQGLLPN 544
+L ++ + ++ +RL+ M G+ P+
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 164/342 (47%), Gaps = 12/342 (3%)
Query: 303 YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEME 362
Y +I + S + + F E+ ++G P + +N LL V +E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 363 RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422
+S V+ D +++ +LI AG E + +L E+ PN IY+ ++ G +GE +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 423 RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482
+ + EM G+ + Y V+I+ K +++M +G+ P+ T+N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 483 DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542
+ K GR A ++F+EM+ERG TYN +I L + + + +++ M++ G+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 543 PNVVTYTTLVDIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFG 602
PN++TY TL+D + C G +A++ R +++ GL PS + N L++ F
Sbjct: 336 PNLITYNTLIDGF-----------CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 603 EDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHK 644
+ A +++ M+E G+KP VTYT L+ R D K
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 7/358 (1%)
Query: 164 LLYSILIHAL---GRSEKLYEAFLLSQRQRLTP--LTYNALISACARNDDLEKALNLMSK 218
++Y+ LI G EK + F + L TY LI+ +N ++ + K
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 219 MRQDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKA 278
M++DG + Y+ V+ L + + + +++ E+ + + N +I G +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAF--QVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 279 GDASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAY 338
++A + + + G++P TY +I G+ +A ++ +LK GL P Y
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 339 NALLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEV 398
N L+ G+ + G A +V EME G+ P + TY++LID +A + E A + ME
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 399 SHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHH 458
P+ YS ++ G+ +G+ ++ K M EP+ YN MI + K +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 459 AMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIM 516
A+ M + + P+ ++ +I+ K + AE L E+M + G P T+ +++
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 373 YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432
Y ++I++Y + + EM + P S ++ +L + + + E K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 433 SSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYD 492
S V D + + ++I + + + + G P+ + + TLID K G +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 493 RAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLV 552
+A++LF EM + G TY ++IN L + + + M+ G+ PN+ TY ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 553 DIYGQSGRFDDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFA 612
+ + GR DA + F MR G+ + + N+LI + + EA
Sbjct: 276 NQLCKDGRTKDAFQ-----------VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 613 VLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVFS 647
V+ MK +G+ P+++TY TL+ V K K S
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 129 WHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGRSEKLYEAFLLSQR 188
++ ++ LC + D A+ V +++ + + + Y+ LI L R KL EA + +
Sbjct: 271 YNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNI-VTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 189 QR---LTP--LTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVIQSLTRTNK 243
+ + P +TYN LI L KAL+L ++ G + Y++++ R K
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR--K 386
Query: 244 IDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATY 303
D+S K+ KE+E I+ +I FA++ + KA++ + +GL P TY
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 304 AAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMER 363
+ +I G+ EA +F+ + E +P YN ++ GY K G A ++ EME
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 364 SGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRI 411
+ P+ +Y +I+ + + A ++++M S P++ I S I
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 393 LKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGK 452
L E E S K +Y I+ Y + EM +G P ++ +N ++
Sbjct: 84 LTESETSKTKFR--LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG 141
Query: 453 YNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTT 512
+ + + F+ S+ + D ++ LI + G +++ +L E+ E G+ P
Sbjct: 142 SSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVI 200
Query: 513 YNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEGLS 572
Y +I+ ++ E K L M GL+ N TYT L++ G F + G+
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN-----GLFKN------GVK 249
Query: 573 DQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTL 632
Q + M+ DG+ P+ N ++N +D R +AF V M+E G+ ++VTY TL
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 633 MKALIRVDKFHK 644
+ L R K ++
Sbjct: 310 IGGLCREMKLNE 321
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 442 FYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEM 501
Y V+I+++ + L+ +++ F+ M+ G P + +N L+ +++ F E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 502 QERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTLVDIYGQSGRF 561
+ + ++ I+I E E LL + G PNVV YTTL+D
Sbjct: 156 KSKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC------ 208
Query: 562 DDAIECLEGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 621
C +G ++A + F M GL + LIN ++ + F + + M+E+G
Sbjct: 209 -----CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 622 LKPDVVTYTTLMKALIRVDKFHKVFSSY 649
+ P++ TY +M L + + F +
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,732,289
Number of Sequences: 539616
Number of extensions: 9888630
Number of successful extensions: 53709
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 40539
Number of HSP's gapped (non-prelim): 3516
length of query: 664
length of database: 191,569,459
effective HSP length: 124
effective length of query: 540
effective length of database: 124,657,075
effective search space: 67314820500
effective search space used: 67314820500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)