Query 006016
Match_columns 664
No_of_seqs 403 out of 1854
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 13:43:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006016.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006016hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 99.8 2.5E-18 8.7E-23 161.8 15.2 129 398-529 16-153 (153)
2 1wfj_A Putative elicitor-respo 99.8 1.6E-18 5.4E-23 159.9 13.4 125 397-533 5-134 (136)
3 2dmh_A Myoferlin; beta-sandwic 99.8 3.4E-18 1.2E-22 158.4 15.4 125 400-533 5-137 (140)
4 3m7f_B E3 ubiquitin-protein li 99.8 2.4E-18 8.1E-23 166.3 14.8 129 399-530 5-142 (176)
5 1rlw_A Phospholipase A2, CALB 99.8 5.7E-18 1.9E-22 153.9 13.5 118 401-528 2-124 (126)
6 2ep6_A MCTP2 protein; beta san 99.7 6.5E-18 2.2E-22 155.5 12.4 123 396-529 7-132 (133)
7 3kwu_A MUNC13-1; calcium bindi 99.7 2.9E-17 1E-21 153.6 15.1 120 398-528 13-146 (148)
8 2fk9_A Protein kinase C, ETA t 99.7 8.6E-18 2.9E-22 160.9 11.2 116 397-528 24-156 (157)
9 1gmi_A Protein kinase C, epsil 99.7 1.7E-17 5.7E-22 153.6 12.6 115 400-530 4-134 (136)
10 3pyc_A E3 ubiquitin-protein li 99.7 3.2E-16 1.1E-20 143.9 13.4 121 401-527 4-131 (132)
11 2nq3_A Itchy homolog E3 ubiqui 99.6 5.4E-16 1.8E-20 150.4 12.3 123 399-531 33-163 (173)
12 2b3r_A Phosphatidylinositol-4- 99.6 1.3E-15 4.6E-20 140.8 10.3 111 397-508 15-130 (134)
13 2z0u_A WW domain-containing pr 99.6 7.2E-16 2.5E-20 146.8 6.8 111 397-507 38-154 (155)
14 2d8k_A Synaptotagmin VII; exoc 99.6 2E-15 6.9E-20 140.1 9.2 109 397-508 21-135 (141)
15 3f04_A Synaptotagmin-1; C2A, c 99.6 2.8E-15 9.6E-20 139.3 10.0 108 398-508 30-142 (143)
16 1rsy_A Synaptotagmin I; calciu 99.6 3.2E-15 1.1E-19 140.8 10.0 109 397-508 37-150 (152)
17 2r83_A Synaptotagmin-1; C2A-C2 99.6 7.4E-15 2.5E-19 151.4 13.3 131 397-531 14-149 (284)
18 2bwq_A Regulating synaptic mem 99.6 3.2E-15 1.1E-19 136.2 8.8 108 398-507 14-129 (129)
19 1a25_A CALB, protein kinase C 99.6 6.2E-15 2.1E-19 138.2 9.9 107 400-508 29-139 (149)
20 3fdw_A Synaptotagmin-like prot 99.6 2.7E-15 9.3E-20 140.5 7.5 112 397-509 18-135 (148)
21 3rdl_A Protein kinase C alpha 99.6 6.9E-15 2.4E-19 135.2 9.2 107 400-508 14-124 (137)
22 2q3x_A Regulating synaptic mem 99.6 7.3E-15 2.5E-19 141.5 9.7 108 400-509 28-140 (171)
23 1wfm_A Synaptotagmin XIII; C2 99.6 1.6E-14 5.6E-19 134.0 11.6 109 397-508 21-132 (138)
24 1rh8_A Piccolo protein; beta-s 99.6 1.9E-15 6.4E-20 140.2 5.1 108 401-508 17-138 (142)
25 3fbk_A RGS3, RGP3, regulator o 99.5 8.9E-15 3.1E-19 138.0 9.3 112 395-508 20-137 (153)
26 1v27_A Regulating synaptic mem 99.5 5.7E-15 2E-19 136.4 7.7 109 398-508 17-133 (141)
27 2cjt_A UNC-13 homolog A, MUNC1 99.5 3.2E-14 1.1E-18 131.6 12.6 89 400-498 3-92 (131)
28 2chd_A Rabphilin-3A, exophilin 99.5 9.9E-15 3.4E-19 135.4 8.5 111 397-508 24-140 (142)
29 2enp_A B/K protein; C2 type 1, 99.5 8E-15 2.7E-19 137.0 7.8 109 397-508 21-141 (147)
30 1ugk_A Synaptotagmin IV, KIAA1 99.5 2.2E-14 7.4E-19 132.7 10.5 109 397-508 17-133 (138)
31 2dmg_A KIAA1228 protein; beta- 99.5 7.2E-15 2.4E-19 136.4 7.2 110 397-508 19-135 (142)
32 3n5a_A Synaptotagmin-7; calciu 99.5 3.8E-14 1.3E-18 130.2 10.4 105 399-506 13-122 (138)
33 1tjx_A Similar to synaptotagmi 99.5 4.9E-14 1.7E-18 133.5 10.7 98 396-494 19-121 (159)
34 1w15_A Synaptotagmin IV; metal 99.5 5.7E-14 2E-18 132.1 9.9 107 397-506 25-136 (153)
35 3nsj_A Perforin-1; pore formin 99.5 3.8E-13 1.3E-17 151.7 17.9 184 319-528 304-503 (540)
36 2cjs_A UNC-13 homolog A, MUNC1 99.5 1.8E-13 6E-18 132.1 12.9 130 400-539 12-151 (167)
37 2cm5_A Rabphilin-3A; protein t 99.5 8.7E-14 3E-18 132.9 10.5 107 397-506 32-143 (166)
38 3jzy_A Intersectin 2; C2 domai 99.5 9.5E-14 3.3E-18 154.7 11.7 117 399-528 384-507 (510)
39 1dqv_A Synaptotagmin III; beta 99.5 1.5E-13 5.1E-18 143.3 12.2 131 396-531 14-151 (296)
40 3l9b_A Otoferlin; C2-domain, b 99.4 5.1E-13 1.8E-17 125.0 11.2 119 401-531 20-142 (144)
41 1cjy_A CPLA2, protein (cytosol 99.3 2.2E-12 7.6E-17 150.0 12.2 107 399-508 15-126 (749)
42 2r83_A Synaptotagmin-1; C2A-C2 99.3 1.7E-11 5.7E-16 126.3 12.1 94 400-494 148-246 (284)
43 1djx_A PLC-D1, phosphoinositid 99.3 2.5E-11 8.4E-16 139.4 14.4 122 400-528 495-623 (624)
44 3bxj_A RAS GTPase-activating p 99.2 1.1E-12 3.7E-17 146.5 1.1 129 399-536 8-164 (483)
45 1dqv_A Synaptotagmin III; beta 99.2 5.9E-12 2E-16 131.2 2.7 95 400-495 150-249 (296)
46 3ohm_B 1-phosphatidylinositol- 99.0 1.4E-09 4.9E-14 128.4 13.7 122 402-534 725-850 (885)
47 2zkm_X 1-phosphatidylinositol- 98.9 3.5E-09 1.2E-13 124.6 13.5 118 400-528 676-798 (799)
48 3qr0_A Phospholipase C-beta (P 98.9 5.9E-09 2E-13 122.4 15.2 124 401-534 649-776 (816)
49 3pfq_A PKC-B, PKC-beta, protei 98.9 1.3E-09 4.5E-14 126.0 8.7 106 401-508 171-280 (674)
50 1yrk_A NPKC-delta, protein kin 98.7 8.8E-08 3E-12 87.4 12.0 111 402-528 6-124 (126)
51 2enj_A NPKC-theta, protein kin 98.7 1.3E-07 4.3E-12 87.4 10.9 112 401-528 9-129 (138)
52 2yrb_A Protein fantom; beta sa 91.5 1.7 5.9E-05 41.0 11.6 127 399-532 15-153 (156)
53 3l4c_A Dedicator of cytokinesi 65.4 86 0.0029 31.0 13.1 54 439-492 78-138 (220)
54 2wxf_A Phosphatidylinositol-4, 60.7 21 0.00072 42.7 9.1 93 400-495 215-325 (940)
55 3hhm_A Phosphatidylinositol-4, 57.8 28 0.00096 42.2 9.5 92 400-494 353-455 (1091)
56 1e7u_A Phosphatidylinositol 3- 36.9 70 0.0024 38.3 8.4 93 401-496 217-332 (961)
57 2y3a_A Phosphatidylinositol-4, 30.6 63 0.0021 39.3 6.6 75 400-477 351-430 (1092)
58 3uv1_A DER F 7 allergen; super 26.1 4.1E+02 0.014 24.9 13.8 43 281-324 100-142 (196)
59 1ewf_A BPI, bactericidal/perme 23.7 6.7E+02 0.023 26.5 13.4 20 292-311 103-122 (456)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=2.5e-18 Score=161.78 Aligned_cols=129 Identities=25% Similarity=0.298 Sum_probs=103.2
Q ss_pred CceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEe
Q 006016 398 EDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKD 475 (664)
Q Consensus 398 ~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D 475 (664)
....|.|+|+|++|++|+.. .|.+||||++++.....+....++|+++++++||+|||+|.|.+... ...|.++|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 34679999999999999987 78999999999985432223456899999999999999999999875 6899999999
Q ss_pred cCCC-CCceeEeEEeecCcccCCCcc------ceEEEecCCcccCCCceeeEEEEEEEEEe
Q 006016 476 SFGF-ADISIGTGEVDLGSLKDTVPT------DRIVELRGGWGLFKNGFTGELLLRLTYKA 529 (664)
Q Consensus 476 ~d~~-kDd~LG~~~IdL~~L~~~~~~------d~~~~L~~~~~~~~~k~~G~I~L~L~y~P 529 (664)
++.. +|++||++.++|.++..+... ..|+.|.... .+.+..|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~--~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS--HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS--TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc--CCCCcceEEEEEEEEeC
Confidence 9986 899999999999999776432 5899996531 23467899999999986
No 2
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.77 E-value=1.6e-18 Score=159.86 Aligned_cols=125 Identities=22% Similarity=0.276 Sum_probs=107.7
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeC-CCCCccccceEEEEEecCCCcEEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFG-PPGEPIWNQDFHLLVANPRKQKLYIQV 473 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik-~tlnPvWnEtf~f~V~~~~~q~L~I~V 473 (664)
...+.|.|.|+|++|++|+.. .|.+||||+++++++. .+|++++ +++||+|||+|.|.+.+. .+.|.|+|
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~------~kT~~~~~~~~nP~Wne~f~f~v~~~-~~~l~~~V 77 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD------QKSNVAEGMGTTPEWNETFIFTVSEG-TTELKAKI 77 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE------EECCCCTTCCSSCEEEEEEEEEEESS-CCEEEEEE
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc------ceeEeccCCCCCCccCcEEEEEECCC-CCEEEEEE
Confidence 345789999999999999987 7899999999998764 3688998 899999999999999874 78999999
Q ss_pred EecCCC-CCceeEeEEeecCcccC-CCccceEEEecCCcccCCCceeeEEEEEEEEEecCCC
Q 006016 474 KDSFGF-ADISIGTGEVDLGSLKD-TVPTDRIVELRGGWGLFKNGFTGELLLRLTYKAYVED 533 (664)
Q Consensus 474 ~D~d~~-kDd~LG~~~IdL~~L~~-~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~~~ 533 (664)
||++.. +|++||.+.++|.++.. +...+.|++|.. +.+..|+|+++++|.|..+.
T Consensus 78 ~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~-----~~~~~G~i~l~l~~~p~~~~ 134 (136)
T 1wfj_A 78 FDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK-----DEEYKGEIWVALSFKPSGPS 134 (136)
T ss_dssp CCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE-----TTEEEEEEEEEEEEEECCSC
T ss_pred EECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec-----CCccCEEEEEEEEEEeCCCC
Confidence 999986 89999999999999943 444578999852 45789999999999997654
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.4e-18 Score=158.36 Aligned_cols=125 Identities=23% Similarity=0.251 Sum_probs=106.8
Q ss_pred eeeEEEEEEEeceecccc-cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC---CCcEEEEEEEe
Q 006016 400 FVGELSVTLVDARKLFYI-YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP---RKQKLYIQVKD 475 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~-~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~---~~q~L~I~V~D 475 (664)
..|.|.|+|++|++|+.. .|.+||||+++++++. ++|+++++++||+|||+|.|.+... ....|.|+|||
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~------~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEK------KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCE------EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEe------EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 468999999999999987 6889999999998754 4799999999999999999999753 36899999999
Q ss_pred cCCC-CCceeEeEEeecCcccCCCccceEEE---ecCCcccCCCceeeEEEEEEEEEecCCC
Q 006016 476 SFGF-ADISIGTGEVDLGSLKDTVPTDRIVE---LRGGWGLFKNGFTGELLLRLTYKAYVED 533 (664)
Q Consensus 476 ~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~---L~~~~~~~~~k~~G~I~L~L~y~P~~~~ 533 (664)
++.. +|++||++.++|.++..+...+.|+. |.+. .+.+..|+|+++++|.|...+
T Consensus 79 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 79 FETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPPSGP 137 (140)
T ss_dssp TTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCCBSS
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECCCCC
Confidence 9986 89999999999999988777788887 5432 234577999999999986654
No 4
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.4e-18 Score=166.33 Aligned_cols=129 Identities=24% Similarity=0.312 Sum_probs=102.2
Q ss_pred ceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEec
Q 006016 399 DFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDS 476 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~ 476 (664)
...|+|+|+|++|++|+.. .|++||||++++.+...+....++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 4579999999999999987 78999999999986443323456899999999999999999999865 67999999999
Q ss_pred CCC-CCceeEeEEeecCcccCCCcc-c-----eEEEecCCcccCCCceeeEEEEEEEEEec
Q 006016 477 FGF-ADISIGTGEVDLGSLKDTVPT-D-----RIVELRGGWGLFKNGFTGELLLRLTYKAY 530 (664)
Q Consensus 477 d~~-kDd~LG~~~IdL~~L~~~~~~-d-----~~~~L~~~~~~~~~k~~G~I~L~L~y~P~ 530 (664)
+.. +|++||.+.++|.++...... + .|+.|... ..+.+..|+|+++++|.|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~--~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR--SHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCS--STTCCCCSEEEEEEEECC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc--CCCCccCEEEEEEEEEEeC
Confidence 986 899999999999999775433 2 79999652 2244678999999999998
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=5.7e-18 Score=153.91 Aligned_cols=118 Identities=21% Similarity=0.281 Sum_probs=101.7
Q ss_pred eeEEEEEEEeceeccc---c--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEe
Q 006016 401 VGELSVTLVDARKLFY---I--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKD 475 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~---~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D 475 (664)
.|.|.|+|++|++|+. . .|.+||||++++++... ..++|+++++++||+|||+|.|.+.......|.++|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d 78 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 78 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEE
Confidence 4899999999999997 3 68999999999986431 24589999999999999999999976667899999999
Q ss_pred cCCCCCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 476 SFGFADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 476 ~d~~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
++..+|++||.+.++|.++..+...+.|++|.+ ...|+|++++...
T Consensus 79 ~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 79 ANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ-------VTEMVLEMSLEVA 124 (126)
T ss_dssp CCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT-------TEEEEEEEEEECC
T ss_pred CCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC-------CceEEEEEEEEeC
Confidence 998889999999999999988777889999854 4678888887643
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=6.5e-18 Score=155.48 Aligned_cols=123 Identities=25% Similarity=0.341 Sum_probs=105.5
Q ss_pred CCCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEE
Q 006016 396 RNEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQV 473 (664)
Q Consensus 396 ~~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V 473 (664)
.+..+.|.|.|+|++|++|+.. .|.+||||+++++++. .+|+++++++||+|||+|.|.+.+. .+.|.++|
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~------~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V 79 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR------LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTV 79 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE------EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE------EEeeeecCCCCCccccEEEEEecCC-CCEEEEEE
Confidence 4556789999999999999987 7899999999998754 3799999999999999999999876 68899999
Q ss_pred EecCCC-CCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEEe
Q 006016 474 KDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYKA 529 (664)
Q Consensus 474 ~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P 529 (664)
||++.. +|++||++.++|.++..+ ...|++|.+. ..+.+..|+|+++++|..
T Consensus 80 ~d~d~~~~~~~lG~~~i~l~~l~~~--~~~w~~L~~~--~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 80 FDEDGDKPPDFLGKVAIPLLSIRDG--QPNCYVLKNK--DLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEETTEEEEECCBCEEEGGGCCSS--CCEECCCBCS--CTTSCCSSEEEEEEEEEE
T ss_pred EECCCCCCCCeeEEEEEEHHHccCC--CceEEEeecC--CCCCccceEEEEEEEEEe
Confidence 999987 899999999999999764 3579988653 123468899999999864
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.73 E-value=2.9e-17 Score=153.64 Aligned_cols=120 Identities=23% Similarity=0.373 Sum_probs=101.5
Q ss_pred CceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEe
Q 006016 398 EDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKD 475 (664)
Q Consensus 398 ~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D 475 (664)
....|.|+|+|++|++|+.. .|.+||||+++++++. ++|+++++++||+|||+|.|.+... .+.|.++|||
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~------~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d 85 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK------KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLD 85 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE------EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEE
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE------EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEE
Confidence 44579999999999999987 7899999999997653 4799999999999999999999876 5899999999
Q ss_pred cCC------------CCCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 476 SFG------------FADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 476 ~d~------------~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
++. .+|++||++.++|.++. ...+.|++|... ....+..|+|+++++|.
T Consensus 86 ~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~--~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 86 EDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKR--TDKSAVSGAIRLHISVE 146 (148)
T ss_dssp CCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCS--STTCCCCCEEEEEEEEE
T ss_pred CCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccC--CCCCCCceEEEEEEEEE
Confidence 997 38999999999999993 346789999642 22345789999999985
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.73 E-value=8.6e-18 Score=160.88 Aligned_cols=116 Identities=22% Similarity=0.252 Sum_probs=99.4
Q ss_pred CCceeeEEEEEEEeceecccc--c----------CCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC
Q 006016 397 NEDFVGELSVTLVDARKLFYI--Y----------GKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP 464 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~----------G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~ 464 (664)
.....|.|+|+|++|++|+.. . |.+||||++.++++. ..+|+++++|+||+|||+|.|.+.+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~-----~~kT~v~~ktlnP~WNE~F~f~v~~- 97 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR-----VGQTSTKQKTNKPTYNEEFCANVTD- 97 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE-----EEECCCCSSCSSCEEEEEEEEEEEE-
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe-----eEEeeecCCCCCCccCcEEEEEcCC-
Confidence 346789999999999999876 2 568999999998754 2479999999999999999999976
Q ss_pred CCcEEEEEEEecCCC-CCceeEeEEeecCcccCC----CccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 465 RKQKLYIQVKDSFGF-ADISIGTGEVDLGSLKDT----VPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 465 ~~q~L~I~V~D~d~~-kDd~LG~~~IdL~~L~~~----~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
.+.|.++|||+|.+ +|++||.+.++|+++..+ ...+.|++|. +.|+|+++++|.
T Consensus 98 -~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~---------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 98 -GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE---------PEGKVFVVITLT 156 (157)
T ss_dssp -ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB---------SSCEEEEEEEEC
T ss_pred -CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC---------CCcEEEEEEEEE
Confidence 46899999999986 799999999999999754 5568899983 479999999883
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.73 E-value=1.7e-17 Score=153.63 Aligned_cols=115 Identities=20% Similarity=0.286 Sum_probs=98.3
Q ss_pred eeeEEEEEEEeceecccc--cCC-----------CCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCC
Q 006016 400 FVGELSVTLVDARKLFYI--YGK-----------PDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRK 466 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~--~G~-----------sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~ 466 (664)
..|.|+|+|++|++|+.. .++ +||||++.++++. ..+|+++++|+||+|||+|.|.+.+.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~-----~~~T~~~~~t~nP~WnE~f~f~v~~~-- 76 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR-----IGQTATKQKTNSPAWHDEFVTDVCNG-- 76 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE-----EEECCCCSSCSSCEEEEEEEEEEEEE--
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE-----eeeeeEECCCcCCccCCEEEEEecCC--
Confidence 469999999999999976 444 8999999997653 34789999999999999999999875
Q ss_pred cEEEEEEEecCCC-CCceeEeEEeecCcccCCC--ccceEEEecCCcccCCCceeeEEEEEEEEEec
Q 006016 467 QKLYIQVKDSFGF-ADISIGTGEVDLGSLKDTV--PTDRIVELRGGWGLFKNGFTGELLLRLTYKAY 530 (664)
Q Consensus 467 q~L~I~V~D~d~~-kDd~LG~~~IdL~~L~~~~--~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~ 530 (664)
+.|.++|||+|.. +|++||.+.++|.++..+. ..+.|+.| .+.|+|+++++|.+.
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L---------~~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL---------EPEGKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC---------BSSCEEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc---------CCCeEEEEEEEEEec
Confidence 7999999999975 7999999999999997753 34789887 357999999999874
No 10
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.68 E-value=3.2e-16 Score=143.94 Aligned_cols=121 Identities=16% Similarity=0.209 Sum_probs=97.6
Q ss_pred eeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEecCC
Q 006016 401 VGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDSFG 478 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~d~ 478 (664)
...|+|+|++|++|+.. .|.+||||++++.+.. ..++|+++++++||+|||+|.|.+... +.|.++|||++.
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~----~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~ 77 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG----QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKK 77 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC----CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGG
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC----ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCC
Confidence 35799999999999987 7899999999997532 245899999999999999999999875 459999999997
Q ss_pred C-C---CceeEeEEeecCcccC-CCccceEEEecCCcccCCCceeeEEEEEEEE
Q 006016 479 F-A---DISIGTGEVDLGSLKD-TVPTDRIVELRGGWGLFKNGFTGELLLRLTY 527 (664)
Q Consensus 479 ~-k---Dd~LG~~~IdL~~L~~-~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y 527 (664)
. + |++||.+.+++.++.. ......|+.|.........+..|+|++++++
T Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 78 IHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 6 3 8999999999998833 3344678888653222234579999999976
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.65 E-value=5.4e-16 Score=150.39 Aligned_cols=123 Identities=20% Similarity=0.288 Sum_probs=101.2
Q ss_pred ceeeEEEEEEEeceecc-cc-cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEec
Q 006016 399 DFVGELSVTLVDARKLF-YI-YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDS 476 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~-~~-~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~ 476 (664)
...|.|.|+|++|++|+ .. .+.+||||+++++++ .++|+++++++||+|||+|.|.+.. .+.|.|+|||+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~------~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~ 104 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQ------SKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSH 104 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTE------EEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEEC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCE------EeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEEC
Confidence 35689999999999999 44 566999999999873 3479999999999999999999853 78999999999
Q ss_pred CCC-CCceeEeEEeecCcccCCCc-----cceEEEecCCcccCCCceeeEEEEEEEEEecC
Q 006016 477 FGF-ADISIGTGEVDLGSLKDTVP-----TDRIVELRGGWGLFKNGFTGELLLRLTYKAYV 531 (664)
Q Consensus 477 d~~-kDd~LG~~~IdL~~L~~~~~-----~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~ 531 (664)
+.. +|++||.+.++|.++..... ...|+.|... ..+.+..|+|++.++|.+..
T Consensus 105 d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~--~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 105 QTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD--KEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp CSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES--SCTTSEEEEEEEEEESEECC
T ss_pred CCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC--CCCCcccEEEEEEEeeeecc
Confidence 986 89999999999999865321 2568888653 12346789999999999873
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.61 E-value=1.3e-15 Score=140.80 Aligned_cols=111 Identities=16% Similarity=0.200 Sum_probs=92.7
Q ss_pred CCceeeEEEEEEEeceecccc-cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEE-EecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI-YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLL-VANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~-~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~-V~~~--~~q~L~I~ 472 (664)
.....|.|.|+|++|++|+.. .|.+||||++++..... .....+|+++++++||+|||+|.|. +... ....|.|+
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~-~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTH-KTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSS-SCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCC-CCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 344679999999999999976 78999999999853211 1234689999999999999999998 7532 36799999
Q ss_pred EEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
|||++.. +|++||++.++|.++..+...+.|++|.+
T Consensus 94 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 94 VLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999986 78999999999999988777889999965
No 13
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.60 E-value=7.2e-16 Score=146.80 Aligned_cols=111 Identities=10% Similarity=0.129 Sum_probs=90.9
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.+ .|.+||||++++.......+..+||+++++|+||+|||+|.|.+... ....|.++
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 344578999999999999988 78999999999975211111246899999999999999999998652 25689999
Q ss_pred EEecCCC-CCceeEeEEeecCcccC-CCccceEEEec
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKD-TVPTDRIVELR 507 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~-~~~~d~~~~L~ 507 (664)
|||+|.. +|++||.+.++|.++.. +.....|+.|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999986 89999999999999964 45667899874
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2e-15 Score=140.11 Aligned_cols=109 Identities=24% Similarity=0.239 Sum_probs=91.7
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEec---CCCcEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVAN---PRKQKLYI 471 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~---~~~q~L~I 471 (664)
+....+.|.|+|++|++|+.. .|.+||||++++.+... ..++|+++++++||+|||+|.|.+.. .....|.|
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 97 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK---HKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYL 97 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS---SEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC---ccEeCceEcCCCCCccccEEEECccCHHHcccCEEEE
Confidence 344678999999999999987 78899999999964321 24589999999999999999998532 23578999
Q ss_pred EEEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 472 QVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 472 ~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
+|||++.. +|++||++.++|.++..+...+.|++|..
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 98 QVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred EEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999986 89999999999999988777789999854
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.59 E-value=2.8e-15 Score=139.32 Aligned_cols=108 Identities=24% Similarity=0.263 Sum_probs=92.2
Q ss_pred CceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEEE
Q 006016 398 EDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQV 473 (664)
Q Consensus 398 ~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~V 473 (664)
....|.|.|+|++|++|+.. .+.+||||++++..... ..++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 30 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 106 (143)
T 3f04_A 30 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAV 106 (143)
T ss_dssp ETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS---CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEE
T ss_pred eCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC---ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEE
Confidence 34678999999999999987 78999999999954322 245899999999999999999988643 357999999
Q ss_pred EecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 474 KDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 474 ~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
||++.. +|++||++.++|.++..+...+.|++|+.
T Consensus 107 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 107 YDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred EeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999986 89999999999999988777889999853
No 16
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=3.2e-15 Score=140.81 Aligned_cols=109 Identities=24% Similarity=0.256 Sum_probs=92.4
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.. .|.+||||++++..... ..++|+++++++||+|||+|.|.+... ....|.|+
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 113 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMA 113 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEE
Confidence 334578999999999999987 78899999999964321 245899999999999999999988642 36789999
Q ss_pred EEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
|||++.. +|++||++.++|.++..+...+.|+.|.+
T Consensus 114 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 114 VYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999986 89999999999999987777789999864
No 17
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=7.4e-15 Score=151.42 Aligned_cols=131 Identities=22% Similarity=0.234 Sum_probs=107.7
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.. .|.+||||++++++... ..++|+++++++||+|||+|.|.+... ..+.|.++
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~ 90 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMA 90 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEE
Confidence 344578999999999999987 78999999999975432 235799999999999999999998643 35799999
Q ss_pred EEecCCC-CCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEEecC
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYKAYV 531 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~ 531 (664)
|||++.. +|++||++.++|.++..+...+.|+.|.... .......|+|++.++|.|..
T Consensus 91 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-~~~~~~~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 91 VYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAE-KEEQEKLGDICFSLRYVPTA 149 (284)
T ss_dssp EEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCS-SCCCCCCCEEEEEEEEETTT
T ss_pred EEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccc-cccccccccEEEEEEecCcC
Confidence 9999986 8999999999999998877778999996531 11234679999999998754
No 18
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.57 E-value=3.2e-15 Score=136.18 Aligned_cols=108 Identities=21% Similarity=0.204 Sum_probs=85.4
Q ss_pred CceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEec---CCCcEEEEE
Q 006016 398 EDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVAN---PRKQKLYIQ 472 (664)
Q Consensus 398 ~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~---~~~q~L~I~ 472 (664)
....|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.. .....|.++
T Consensus 14 ~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 14 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRS-DKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp ETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCS-GGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred ccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCC-CCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 34568999999999999987 78899999999854221 1234689999999999999999998532 235799999
Q ss_pred EEecCCC-C--CceeEeEEeecCcccCCCccceEEEec
Q 006016 473 VKDSFGF-A--DISIGTGEVDLGSLKDTVPTDRIVELR 507 (664)
Q Consensus 473 V~D~d~~-k--Dd~LG~~~IdL~~L~~~~~~d~~~~L~ 507 (664)
|||++.. + |++||.+.++|.++.... .+.|++|+
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9999986 4 999999999999987654 77899873
No 19
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.56 E-value=6.2e-15 Score=138.24 Aligned_cols=107 Identities=22% Similarity=0.279 Sum_probs=90.4
Q ss_pred eeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC-CcEEEEEEEec
Q 006016 400 FVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR-KQKLYIQVKDS 476 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~-~q~L~I~V~D~ 476 (664)
..|.|.|+|++|++|+.. .+.+||||++++..... ....++|+++++++||+|||+|.|.+.... ...|.|+|||+
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPK-SESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTT-CSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCC-CcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 358899999999999987 78899999999975321 123468999999999999999999987642 46899999999
Q ss_pred CCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 477 FGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 477 d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
+.. +|++||++.++|.++... ..+.|++|.+
T Consensus 108 d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 108 DLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp CSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 986 899999999999999775 5778999865
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.56 E-value=2.7e-15 Score=140.53 Aligned_cols=112 Identities=20% Similarity=0.294 Sum_probs=93.3
Q ss_pred CCceeeEEEEEEEeceecccc---cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI---YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYI 471 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~---~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I 471 (664)
+....|.|.|+|++|++|+.. .|.+||||++++...... ...++|+++++++||+|||+|.|.+.... ...|.|
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~ 96 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSR-QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQF 96 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSG-GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcc-cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEE
Confidence 344578999999999999965 588999999999754321 23568999999999999999999987642 457999
Q ss_pred EEEecCCC-CCceeEeEEeecCcccCCCccceEEEecCC
Q 006016 472 QVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGG 509 (664)
Q Consensus 472 ~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~ 509 (664)
+|||++.. +|++||++.++|.++..+...+.|++|++.
T Consensus 97 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 97 SVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999986 899999999999999877677899999763
No 21
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.56 E-value=6.9e-15 Score=135.19 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=89.9
Q ss_pred eeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC-CcEEEEEEEec
Q 006016 400 FVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR-KQKLYIQVKDS 476 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~-~q~L~I~V~D~ 476 (664)
..|.|.|+|++|++|+.. .|.+||||++++..... ....++|++++++.||+|||+|.|.+.... ...|.++|||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPK-NESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTT-CCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCC-CCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 468999999999999987 78999999999853321 123468999999999999999999987532 45899999999
Q ss_pred CCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 477 FGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 477 d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
+.. +|++||.+.++|.++.... .+.|+.|.+
T Consensus 93 d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 93 DRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp CSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 986 8999999999999997754 788999865
No 22
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.55 E-value=7.3e-15 Score=141.51 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=92.1
Q ss_pred eeeEEEEEEEeceecccc---cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEE-e
Q 006016 400 FVGELSVTLVDARKLFYI---YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVK-D 475 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~---~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~-D 475 (664)
..|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+... ...|.|+|| |
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~L~~~V~~d 105 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGA-CIAKKKTRIARKTLDPLYQQSLVFDESPQ-GKVLQVIVWGD 105 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTE-EEEEEECCCCCSCSSCEEEEEEECSSCCT-TEEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCc-cccceeCccCCCCCCCCCCcEEEEEecCC-CCEEEEEEEEc
Confidence 578999999999999987 48899999999876421 12356899999999999999999998654 789999999 9
Q ss_pred cCCC-CCceeEeEEeecCcccCCCccceEEEecCC
Q 006016 476 SFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGG 509 (664)
Q Consensus 476 ~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~ 509 (664)
+|.. +|++||.+.++|.++..+...+.|++|...
T Consensus 106 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 106 YGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp CSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9986 889999999999999877678899999653
No 23
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=1.6e-14 Score=134.02 Aligned_cols=109 Identities=19% Similarity=0.153 Sum_probs=88.8
Q ss_pred CCceeeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQVK 474 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~V~ 474 (664)
+....|.|.|+|++|++ ....|.+||||++++..... +..++|+++++++||+|||+|.|.+... ....|.++||
T Consensus 21 y~~~~~~L~V~v~~a~~-~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT-SNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC-CCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc-CCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 34457899999999994 12278999999999954211 2346899999999999999999998653 2568999999
Q ss_pred ecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 475 DSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 475 D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
|+|.+ +|++||.+.++|.++......+.|+.|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99986 89999999999999976667789999965
No 24
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.55 E-value=1.9e-15 Score=140.20 Aligned_cols=108 Identities=25% Similarity=0.275 Sum_probs=90.6
Q ss_pred eeEEEEEEEeceecccc--cCCCCcEEEEEeccccccc--------eeeeeeEEeCCCCCccccceEEEE-Eec--CCCc
Q 006016 401 VGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRS--------KKNSQTTVFGPPGEPIWNQDFHLL-VAN--PRKQ 467 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~s--------k~~~kT~Vik~tlnPvWnEtf~f~-V~~--~~~q 467 (664)
.|.|.|+|++|++|+.. .|.+||||++++.+..... ...++|+++++++||+|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 68999999999999988 7889999999998753210 123579999999999999999986 542 2367
Q ss_pred EEEEEEEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 468 KLYIQVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 468 ~L~I~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
.|.++|||++.. +|++||.+.++|.++......+.|++|.+
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 999999999986 79999999999999987667789999965
No 25
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.55 E-value=8.9e-15 Score=138.03 Aligned_cols=112 Identities=20% Similarity=0.214 Sum_probs=92.3
Q ss_pred cCCCceeeEEEEEEEeceecccc-cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEe--cCCCcEEEE
Q 006016 395 DRNEDFVGELSVTLVDARKLFYI-YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVA--NPRKQKLYI 471 (664)
Q Consensus 395 ~~~~~~~GvL~VtV~~Ar~L~~~-~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~--~~~~q~L~I 471 (664)
..+....|.|.|+|++|++|+.. .|.+||||++++...... ...++|+++++++||+|||+|.|.+. +. ...|.|
T Consensus 20 L~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L~i 97 (153)
T 3fbk_A 20 LSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSR-LRHQKTQTVPDCRDPAFHEHFFFPVQEEDD-QKRLLV 97 (153)
T ss_dssp EEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCC-TTCEECCCCTTCSSCEEEEEEEEECCGGGT-TSEEEE
T ss_pred EEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCC-ccEEeccccCCCCCCccccEEEEecccHHh-CCEEEE
Confidence 34555689999999999999988 789999999998643211 23468999999999999999999984 34 456999
Q ss_pred EEEecCCC-C-CceeEeEEeecCcccC-CCccceEEEecC
Q 006016 472 QVKDSFGF-A-DISIGTGEVDLGSLKD-TVPTDRIVELRG 508 (664)
Q Consensus 472 ~V~D~d~~-k-Dd~LG~~~IdL~~L~~-~~~~d~~~~L~~ 508 (664)
+|||++.. + |++||++.++|.++.. +...+.|+.|.+
T Consensus 98 ~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 98 TVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 99999985 4 9999999999999975 566788999965
No 26
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=5.7e-15 Score=136.40 Aligned_cols=109 Identities=21% Similarity=0.199 Sum_probs=89.0
Q ss_pred CceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEec---CCCcEEEEE
Q 006016 398 EDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVAN---PRKQKLYIQ 472 (664)
Q Consensus 398 ~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~---~~~q~L~I~ 472 (664)
....|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.. .....|.|+
T Consensus 17 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 17 DKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRS-DKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp ETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCS-SSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred eCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCC-CCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 34468999999999999987 78899999999854321 1234689999999999999999998432 235799999
Q ss_pred EEecCCC-C--CceeEeEEeecCcccCCCccceEEEecC
Q 006016 473 VKDSFGF-A--DISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 473 V~D~d~~-k--Dd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
|||++.. + |++||.+.++|.++.... .+.|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 9999986 4 899999999999987653 778999965
No 27
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.54 E-value=3.2e-14 Score=131.61 Aligned_cols=89 Identities=22% Similarity=0.251 Sum_probs=73.2
Q ss_pred eeeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeC-CCCCccccceEEEEEecCCCcEEEEEEEecCC
Q 006016 400 FVGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFG-PPGEPIWNQDFHLLVANPRKQKLYIQVKDSFG 478 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik-~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~d~ 478 (664)
+.|.|.|+|++|+++.. .|.+||||+++ .+.. +|++++ +++||+|||+|.|.+... ...|.++|||+|.
T Consensus 3 ~~~~L~V~V~~A~~l~~-~g~~DPYv~v~--~~~~------kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA-QEKFNTYVTLK--VQNV------KSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKGL 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC-GGGCEEEEEEE--ETTE------EEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECCS
T ss_pred cceEEEEEEEEeECCCC-CCCcCeEEEEE--ecCE------EEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECCC
Confidence 46899999999998743 67899999999 2221 355554 699999999999999875 5689999999994
Q ss_pred CCCceeEeEEeecCcccCCC
Q 006016 479 FADISIGTGEVDLGSLKDTV 498 (664)
Q Consensus 479 ~kDd~LG~~~IdL~~L~~~~ 498 (664)
.+|++||++.++|.++....
T Consensus 73 ~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBCS
T ss_pred CCCCeEEEEEEEHHHhhhcC
Confidence 48999999999999986543
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.54 E-value=9.9e-15 Score=135.44 Aligned_cols=111 Identities=23% Similarity=0.333 Sum_probs=91.2
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEE-EecC--CCcEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLL-VANP--RKQKLYI 471 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~-V~~~--~~q~L~I 471 (664)
+....|.|.|+|++|++|+.. .|.+||||++++.+... ....++|+++++++||+|||+|.|. +... ....|.|
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i 102 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGAS-KSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRI 102 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCS-GGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCC-CcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEE
Confidence 344678999999999999988 78899999999975321 1234689999999999999999998 5432 1368999
Q ss_pred EEEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 472 QVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 472 ~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
+|||++.. +|++||++.++|.++..+.....|+.|..
T Consensus 103 ~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 103 SVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999986 78999999999999988777778888753
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=8e-15 Score=137.02 Aligned_cols=109 Identities=20% Similarity=0.227 Sum_probs=89.6
Q ss_pred CCceeeEEEEEEEeceecccc---c------CCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--C
Q 006016 397 NEDFVGELSVTLVDARKLFYI---Y------GKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--R 465 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~---~------G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~ 465 (664)
+....|.|.|+|++|++|+.. . |.+||||++++..... ..++|+++++++||+|||+|.|.+... .
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 97 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEERYTFEIPFLEAQ 97 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBCCEECCCHHHHH
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeeeEEEEeChHHhc
Confidence 445678999999999999973 2 4799999999975322 245899999999999999999988642 2
Q ss_pred CcEEEEEEEecCCC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 466 KQKLYIQVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 466 ~q~L~I~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
...|.|+|||++.. +|++||.+.++|.++......+.|+.|+.
T Consensus 98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp HSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred cCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 45899999999986 88999999999999977666678888864
No 30
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.53 E-value=2.2e-14 Score=132.67 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=88.9
Q ss_pred CCceeeEEEEEEEeceecccc--c-CCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEE-EecC--CCcEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--Y-GKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLL-VANP--RKQKLY 470 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~-G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~-V~~~--~~q~L~ 470 (664)
+....|.|.|+|++|++|+.. . |.+||||++++..... ..++|+++++++||+|||+|.|. +... ....|.
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~ 93 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKK---HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALH 93 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTC---SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCC---ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEE
Confidence 344678999999999999987 3 7899999999975321 34689999999999999999995 5532 246899
Q ss_pred EEEEecCCC-CCceeEeEEeecCcccCCC-ccceEEEecC
Q 006016 471 IQVKDSFGF-ADISIGTGEVDLGSLKDTV-PTDRIVELRG 508 (664)
Q Consensus 471 I~V~D~d~~-kDd~LG~~~IdL~~L~~~~-~~d~~~~L~~ 508 (664)
|+|||++.. +|++||++.++|.++.... ....|+.|..
T Consensus 94 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 94 FTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999999986 8999999999999997753 3456788754
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=7.2e-15 Score=136.41 Aligned_cols=110 Identities=25% Similarity=0.304 Sum_probs=89.3
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.. .| +||||++++..... ....++|+++++++||+|||+|.|.+... ....|.|+
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 96 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKR-RSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVA 96 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCC-SSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCC-CCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEE
Confidence 334578999999999999987 67 99999999864321 12346899999999999999999988542 24589999
Q ss_pred EEecCCC-C--CceeEeEEeecCcccCCCccceEEEecC
Q 006016 473 VKDSFGF-A--DISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 473 V~D~d~~-k--Dd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
|||++.. + |++||.+.++|.++......+.|+.|.+
T Consensus 97 V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 97 VKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EEECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 9999975 2 5799999999999977667788999865
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.51 E-value=3.8e-14 Score=130.19 Aligned_cols=105 Identities=21% Similarity=0.244 Sum_probs=85.0
Q ss_pred ceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEEEEE
Q 006016 399 DFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYIQVK 474 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I~V~ 474 (664)
...|.|.|+|++|++|+.. .|.+||||++++.+.... ...++|++++++.||+|||+|.|.+.... ...|.++||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~-~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~ 91 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKR-VEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVM 91 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEE-EEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCc-cceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEE
Confidence 4568999999999999987 788999999999764321 23568999999999999999999986542 368999999
Q ss_pred ecCCC-CCceeEeEEeecCcccCCCccceEEEe
Q 006016 475 DSFGF-ADISIGTGEVDLGSLKDTVPTDRIVEL 506 (664)
Q Consensus 475 D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L 506 (664)
|++.. +|++||.+.++|.++.. ..+.|+.|
T Consensus 92 d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l 122 (138)
T 3n5a_A 92 DKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDM 122 (138)
T ss_dssp ECCSSSCCEEEEEEEESSSSCHH--HHHHHHHH
T ss_pred ECCCCCCCcEEEEEEEccccCCh--HHHHHHHH
Confidence 99986 89999999999997542 23345444
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.51 E-value=4.9e-14 Score=133.50 Aligned_cols=98 Identities=27% Similarity=0.313 Sum_probs=81.4
Q ss_pred CCCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEE
Q 006016 396 RNEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYI 471 (664)
Q Consensus 396 ~~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I 471 (664)
.+....|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.... ...|.|
T Consensus 19 ~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 97 (159)
T 1tjx_A 19 RYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 97 (159)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred EEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCc-eeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence 3444678999999999999988 78899999999975321 123468999999999999999999986532 467999
Q ss_pred EEEecCCC-CCceeEeEEeecCcc
Q 006016 472 QVKDSFGF-ADISIGTGEVDLGSL 494 (664)
Q Consensus 472 ~V~D~d~~-kDd~LG~~~IdL~~L 494 (664)
+|||++.. +|++||.+.+++..+
T Consensus 98 ~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 98 TVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp EEEECCSSSCCEEEEEEEEETTCC
T ss_pred EEEECCCCCCCceEEEEEECCCCC
Confidence 99999986 899999999999964
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.49 E-value=5.7e-14 Score=132.06 Aligned_cols=107 Identities=20% Similarity=0.140 Sum_probs=81.9
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.... ...|.|+
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~ 103 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKK-RISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTE-EEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCe-EeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEE
Confidence 344578999999999999987 78899999999964321 112468999999999999999999987642 4789999
Q ss_pred EEecCCC-CCceeEeEEeecCcccCCCccceEEEe
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVEL 506 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L 506 (664)
|||++.. +|++||.+.++|.+. ....+.|+.|
T Consensus 104 V~d~d~~~~~~~lG~~~i~l~~~--~~~~~~W~~l 136 (153)
T 1w15_A 104 VLDSERGSRNEVIGRLVLGATAE--GSGGGHWKEI 136 (153)
T ss_dssp EEECCTTSCCEEEEEEEESTTCC--SHHHHHHHHH
T ss_pred EEeCCCCCCCcEEEEEEECCCCC--chHHHHHHHH
Confidence 9999986 899999999999882 2233445554
No 35
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.49 E-value=3.8e-13 Score=151.73 Aligned_cols=184 Identities=17% Similarity=0.128 Sum_probs=128.6
Q ss_pred cCeeeEEeecCce-EEEEEeEeccccccc-chhHHHHHHHHHHhhcccceee-----ccceeecccCCc------cCCCC
Q 006016 319 VGAVSWAFVSLPK-IKFELSPFRLFNLMA-IPVLSMFLKKLLTEDLPRLFVR-----PKKIVLDFQKGK------AVGPV 385 (664)
Q Consensus 319 v~~v~vsFle~P~-idf~lk~lg~~di~~-iPgL~~~I~~~I~~~l~~~lV~-----P~~l~i~l~~~~------a~gP~ 385 (664)
+..+.=|+...|. |+|.+.|+. ++.. -+-...-++.+|.+++...-.+ |-.=........ ..+|.
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI~--~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~ 381 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPLH--TLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKV 381 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEGG--GGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTT
T ss_pred HHHHHHHHhhCCceEEEEEEEHH--HhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCC
Confidence 4455556667786 599999975 3332 3566777888888877755444 322111111111 11111
Q ss_pred ccccccccccCCCceeeEEEEEEEeceecccc-cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEec-
Q 006016 386 ANDLKSGEQDRNEDFVGELSVTLVDARKLFYI-YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVAN- 463 (664)
Q Consensus 386 ~~dl~sg~~~~~~~~~GvL~VtV~~Ar~L~~~-~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~- 463 (664)
. .++-.......|.|.|+|++|++|+.- .|++||||+++++++. .+|+++++++||+|||+|.|.+..
T Consensus 382 t----~~~~C~~~~~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~------~kTkvik~tlNP~Wne~f~f~~~~~ 451 (540)
T 3nsj_A 382 T----NQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQE------FRTGVVWNNNNPRWTDKMDFENVLL 451 (540)
T ss_dssp B----CGGGCBSSTTEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEE------EECCCBCSCSSCBCCCCEEEEEEET
T ss_pred c----ccccccccCcccEEEEEEEEccCCCcccCCCcCeEEEEEECCEe------eeeeeecCCCCCCCCeEEEEEEecC
Confidence 1 121123334589999999999999876 7899999999998653 479999999999999999998653
Q ss_pred CCCcEEEEEEEecCCC-CCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 464 PRKQKLYIQVKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 464 ~~~q~L~I~V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
...+.|.|+|||+|.. +||+||.+.++|.. +..+.|+.| ..|.|++.++..
T Consensus 452 ~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~----g~~~~~~~l----------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 452 STGGPLRVQVWDADYGWDDDLLGSCDRSPHS----GFHEVTCEL----------NHGRVKFSYHAK 503 (540)
T ss_dssp TTCCCEEEEEEECCSSSCCEEEEEEEECCCS----EEEEEEEEC----------SSSEEEEEEEEE
T ss_pred CCCCEEEEEEEECCCCCCCCEEEEEEEEeeC----CcEEEEEEc----------CCeEEEEEEEEE
Confidence 3478999999999986 88999999999883 235667765 358888887643
No 36
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.48 E-value=1.8e-13 Score=132.07 Aligned_cols=130 Identities=18% Similarity=0.195 Sum_probs=90.6
Q ss_pred eeeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeC-CCCCccccceEEEEEecCCCcEEEEEEEecCC
Q 006016 400 FVGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFG-PPGEPIWNQDFHLLVANPRKQKLYIQVKDSFG 478 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik-~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~d~ 478 (664)
+.|+|.|+|++|+++. ..|++||||+++ .+. .+|++++ ++.||+|||+|.|.+... ...|.|+|||+|.
T Consensus 12 ~~~~L~V~V~~A~~l~-~~g~~DPYV~v~--~~~------~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG-AQEKFNTYVTLK--VQN------VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKGL 81 (167)
T ss_dssp CCCEEEEEEEEEECSS-CGGGCEEEEEEE--ETT------EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECCS
T ss_pred ceEEEEEEEEEEECCC-CCCCCCeEEEEE--ecc------eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECCC
Confidence 4789999999999874 367899999999 222 2465665 699999999999999875 6689999999994
Q ss_pred CCCceeEeEEeecCcccCCCcc--ceEEEecCCcccCCC-------ceeeEEEEEEEEEecCCCCcchhh
Q 006016 479 FADISIGTGEVDLGSLKDTVPT--DRIVELRGGWGLFKN-------GFTGELLLRLTYKAYVEDEEDDTT 539 (664)
Q Consensus 479 ~kDd~LG~~~IdL~~L~~~~~~--d~~~~L~~~~~~~~~-------k~~G~I~L~L~y~P~~~~ee~~~~ 539 (664)
.+|++||++.++|+++...... ..|.++.-.-....+ ...|.+++++++.....-.++++.
T Consensus 82 ~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~~~~~eea~ 151 (167)
T 2cjs_A 82 IWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPLDIPEEEAR 151 (167)
T ss_dssp SCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCCCCCHHHHH
T ss_pred CCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCCCCchHHHH
Confidence 4899999999999998654311 123332100000111 234568888887655444444333
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.48 E-value=8.7e-14 Score=132.85 Aligned_cols=107 Identities=21% Similarity=0.231 Sum_probs=85.8
Q ss_pred CCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEEE
Q 006016 397 NEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQ 472 (664)
Q Consensus 397 ~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~ 472 (664)
+....|.|.|+|++|++|+.. .|.+||||++++.+.... ...++|+++++++||+|||+|.|.+... ....|.|+
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 110 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGK-KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS 110 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCc-cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEE
Confidence 344578999999999999987 788999999999764321 2356899999999999999999998653 25689999
Q ss_pred EEecCCC-CCceeEeEEeecCcccCCCccceEEEe
Q 006016 473 VKDSFGF-ADISIGTGEVDLGSLKDTVPTDRIVEL 506 (664)
Q Consensus 473 V~D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L 506 (664)
|||++.. +|++||.+.++|.++.. ..+.|+.|
T Consensus 111 V~d~d~~~~~~~iG~~~i~l~~~~~--~~~~W~~l 143 (166)
T 2cm5_A 111 VWDYDIGKSNDYIGGCQLGISAKGE--RLKHWYEC 143 (166)
T ss_dssp EEECCSSSCCEEEEEEEEETTCCHH--HHHHHHHH
T ss_pred EEECCCCCCCcEEEeEEEecccCCc--hhHHHHHH
Confidence 9999986 89999999999998643 23445554
No 38
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=9.5e-14 Score=154.68 Aligned_cols=117 Identities=25% Similarity=0.410 Sum_probs=99.1
Q ss_pred ceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEEEec
Q 006016 399 DFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDS 476 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~ 476 (664)
...|.|.|+|++|++|+.. .|.+||||+++++++. ++|+++++++||+|||+|.|.+.....+.|.++|||+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~------~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~ 457 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS------YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDR 457 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE------EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEEC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee------ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeC
Confidence 3578999999999999887 7899999999997653 4799999999999999999999887678899999999
Q ss_pred CCC-CCceeEeEEeecCcccCCC----ccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 477 FGF-ADISIGTGEVDLGSLKDTV----PTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 477 d~~-kDd~LG~~~IdL~~L~~~~----~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
|.. +|++||.+.++|.++..+. +...|+.|.+ +..|+|++.+.+.
T Consensus 458 d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~-------~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 458 DQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE-------VPTGEVWVRFDLQ 507 (510)
T ss_dssp CSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS-------SSSCEEEEEEEEE
T ss_pred CCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCC-------CCCceEEEEEEEE
Confidence 986 8999999999999997643 2567888754 4779998887654
No 39
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.47 E-value=1.5e-13 Score=143.30 Aligned_cols=131 Identities=27% Similarity=0.235 Sum_probs=102.3
Q ss_pred CCCceeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecC--CCcEEEE
Q 006016 396 RNEDFVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYI 471 (664)
Q Consensus 396 ~~~~~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I 471 (664)
.+....|.|.|+|++|++|+.. .|.+||||++++..... ..++|+++++++||+|||+|.|.+... ....|.|
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 90 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF 90 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCC---eeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence 3445679999999999999987 78899999999953211 235899999999999999999998643 2458999
Q ss_pred EEEecCCC-CCceeEeEEee-cCcccC-CCccceEEEecCCcccCCCceeeEEEEEEEEEecC
Q 006016 472 QVKDSFGF-ADISIGTGEVD-LGSLKD-TVPTDRIVELRGGWGLFKNGFTGELLLRLTYKAYV 531 (664)
Q Consensus 472 ~V~D~d~~-kDd~LG~~~Id-L~~L~~-~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~ 531 (664)
+|||+|.+ +|++||.+.++ +.++.. ......|+.|... .......|+|++.+.|.|..
T Consensus 91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~--~~~~~~~G~i~vsl~y~~~~ 151 (296)
T 1dqv_A 91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG--GSEKADLGELNFSLCYLPTA 151 (296)
T ss_dssp EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC--SSCCSCCCEEEEEEEEETTT
T ss_pred EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccc--cccccccceEEEEEEecccc
Confidence 99999986 89999999996 555544 2345678888542 12335679999999998754
No 40
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.43 E-value=5.1e-13 Score=124.96 Aligned_cols=119 Identities=19% Similarity=0.156 Sum_probs=98.9
Q ss_pred eeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeC-CCCCccccceEEEEEecC--CCcEEEEEEEecC
Q 006016 401 VGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFG-PPGEPIWNQDFHLLVANP--RKQKLYIQVKDSF 477 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik-~tlnPvWnEtf~f~V~~~--~~q~L~I~V~D~d 477 (664)
.--|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.+.+..+ ..+.|.++|||++
T Consensus 20 ~msL~V~l~~a~~Lp---g~~Dp~akv~FRg~k------~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 20 HMALIVHLKTVSELR---GRADRIAKVTFRGQS------FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp CEEEEEEEEEEESCC---SCEEEEEEEEETTEE------EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEecCCC---CCCCCeEEEEEeccc------eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 446999999999998 789999999996543 4799998 699999999999999754 3788999999999
Q ss_pred CC-CCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEEecC
Q 006016 478 GF-ADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYKAYV 531 (664)
Q Consensus 478 ~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~ 531 (664)
.+ ++++||++.++|+++...+....+..|.+. .++...++|.++++|.|..
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~---n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDD---NNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHSEEEEEEEEECT---TSCEEEEEEEEEEEEEETT
T ss_pred cccCCCEEEEEEEEhHHhccCCeEEEeecccCC---CCCccccEEEEEEEecCCC
Confidence 85 999999999999999887655556667553 2334568999999999954
No 41
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.35 E-value=2.2e-12 Score=149.95 Aligned_cols=107 Identities=21% Similarity=0.343 Sum_probs=94.6
Q ss_pred ceeeEEEEEEEeceeccc---c--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCCCcEEEEEE
Q 006016 399 DFVGELSVTLVDARKLFY---I--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPRKQKLYIQV 473 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~---~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V 473 (664)
.+.|.|+|+|++|++|+. . .|++||||++++.+... ..+||+++++++||+|||+|.|.+.....+.|.|+|
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V 91 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL 91 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence 467999999999999998 6 78999999999986432 245899999999999999999999886678999999
Q ss_pred EecCCCCCceeEeEEeecCcccCCCccceEEEecC
Q 006016 474 KDSFGFADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 474 ~D~d~~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
||+|...|++||++.++|.++..+...+.|+.|..
T Consensus 92 ~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 92 MDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EECCSSSCEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred EECCCCCCceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 99998669999999999999988777889999954
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.27 E-value=1.7e-11 Score=126.27 Aligned_cols=94 Identities=27% Similarity=0.324 Sum_probs=78.7
Q ss_pred eeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEEEEEe
Q 006016 400 FVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYIQVKD 475 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I~V~D 475 (664)
..|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.... ...|.|+|||
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d 226 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGK-RLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLD 226 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTE-EEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEE
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCc-EeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEe
Confidence 467899999999999987 78899999999864321 113468999999999999999999987542 4579999999
Q ss_pred cCCC-CCceeEeEEeecCcc
Q 006016 476 SFGF-ADISIGTGEVDLGSL 494 (664)
Q Consensus 476 ~d~~-kDd~LG~~~IdL~~L 494 (664)
++.. +|++||.+.+++..+
T Consensus 227 ~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 227 YDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CCSSSCCCEEEEEEEETTCC
T ss_pred CCCCCCCcEEEEEEECCCCC
Confidence 9986 899999999999874
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.26 E-value=2.5e-11 Score=139.39 Aligned_cols=122 Identities=20% Similarity=0.246 Sum_probs=98.7
Q ss_pred eeeEEEEEEEeceecccc----cCCCCcEEEEEeccccccceeeeeeEEeCCC-CCccccceEEEEEecCCCcEEEEEEE
Q 006016 400 FVGELSVTLVDARKLFYI----YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPP-GEPIWNQDFHLLVANPRKQKLYIQVK 474 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~----~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~t-lnPvWnEtf~f~V~~~~~q~L~I~V~ 474 (664)
..+.|+|+|++|++|+.. .|.+||||++.+.+.... ...+||++++++ +||+|||+|.|.+..+....|.++||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 568999999999999876 378999999999653221 124589999997 99999999999998765678999999
Q ss_pred ecCCC-CCceeEeEEeecCcccCCCccceEEEecCCcccCCC-ceeeEEEEEEEEE
Q 006016 475 DSFGF-ADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKN-GFTGELLLRLTYK 528 (664)
Q Consensus 475 D~d~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~-k~~G~I~L~L~y~ 528 (664)
|+|.. +|++||++.++|..|..+ .+|++|.+. .+. -..|+|.+.++|.
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~---~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSK---NGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCE---EEEEEEECT---TSCEEEEEEEEEEEEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCC---cEEEeCCCC---CcCCCCceEEEEEEEEE
Confidence 99986 899999999999999764 468888653 112 2468888888874
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.23 E-value=1.1e-12 Score=146.47 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=25.5
Q ss_pred ceeeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeCCC---CCccccceEEEEEecCCCcEEEEEEEe
Q 006016 399 DFVGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFGPP---GEPIWNQDFHLLVANPRKQKLYIQVKD 475 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~t---lnPvWnEtf~f~V~~~~~q~L~I~V~D 475 (664)
...|.|+|+|++|++|+.+ .||||++.++++.. .||+++++| +||+|||+|.|.+... .+.|.++|||
T Consensus 8 r~~~~L~V~VieAk~L~~~---ddpYv~v~l~~~~~-----~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d 78 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPK---KRYYCELCLDDMLY-----ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYR 78 (483)
T ss_dssp EEEECC-----------------------------------------------------CCEECC---------------
T ss_pred eeccEEEEEEEEcCCcCCC---CCCeEEEEECCeEE-----eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEe
Confidence 4578999999999999854 39999999987532 379999999 9999999999987554 5889999999
Q ss_pred c-CC----CCCceeEeEEeecCcccCCCccceEEEecCCccc--------------------CCCceeeEEEEEEEEEec
Q 006016 476 S-FG----FADISIGTGEVDLGSLKDTVPTDRIVELRGGWGL--------------------FKNGFTGELLLRLTYKAY 530 (664)
Q Consensus 476 ~-d~----~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~--------------------~~~k~~G~I~L~L~y~P~ 530 (664)
. |. .+|++||.+.+++.++..+...+.|++|.+.... .+.+..|.|+++++|.+.
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~ 158 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTM 158 (483)
T ss_dssp ----------------------------CCEECC--------------------------------------CEEEEEEC
T ss_pred cCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeee
Confidence 4 42 4899999999999999887778899999543110 012357999999999886
Q ss_pred CCCCcc
Q 006016 531 VEDEED 536 (664)
Q Consensus 531 ~~~ee~ 536 (664)
..-+.+
T Consensus 159 ~vlP~~ 164 (483)
T 3bxj_A 159 SILPME 164 (483)
T ss_dssp CBCCGG
T ss_pred eeccHH
Confidence 644433
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.17 E-value=5.9e-12 Score=131.21 Aligned_cols=95 Identities=27% Similarity=0.259 Sum_probs=79.2
Q ss_pred eeeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC--CcEEEEEEEe
Q 006016 400 FVGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR--KQKLYIQVKD 475 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~--~q~L~I~V~D 475 (664)
..|.|.|+|++|++|+.. .|.+||||++++..... ....++|+++++++||+|||+|.|.+.... ...|.|+|||
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~-~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGR-RLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCC-TTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCc-CccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 468999999999999987 78899999999974211 113468999999999999999999886532 4579999999
Q ss_pred cCCC-CCceeEeEEeecCccc
Q 006016 476 SFGF-ADISIGTGEVDLGSLK 495 (664)
Q Consensus 476 ~d~~-kDd~LG~~~IdL~~L~ 495 (664)
++.. +|++||.+.+++..+.
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTC
T ss_pred CCCCCCCceEEEEEECCccCC
Confidence 9986 8999999999998764
No 46
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.01 E-value=1.4e-09 Score=128.43 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=95.2
Q ss_pred eEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeEEeCC-CCCccccc-eEEEE-EecCCCcEEEEEEEecCC
Q 006016 402 GELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTTVFGP-PGEPIWNQ-DFHLL-VANPRKQKLYIQVKDSFG 478 (664)
Q Consensus 402 GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~-tlnPvWnE-tf~f~-V~~~~~q~L~I~V~D~d~ 478 (664)
..|.|+|++|++|+. ..+||||++.+.+.....+..++|+++++ +.||+||| +|.|. |..+....|+++|||+|
T Consensus 725 ~~L~V~Visaq~L~~--~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d- 801 (885)
T 3ohm_B 725 NALRVKVISGQFLSD--RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG- 801 (885)
T ss_dssp EEEEEEEEEEESCCS--SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT-
T ss_pred eEEEEEEEEeccCcc--cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC-
Confidence 479999999999985 36899999999763322222357999976 59999999 69998 76665678999999987
Q ss_pred CCCceeEeEEeecCcccCCCccceEEEecCCcccCCC-ceeeEEEEEEEEEecCCCC
Q 006016 479 FADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKN-GFTGELLLRLTYKAYVEDE 534 (664)
Q Consensus 479 ~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~-k~~G~I~L~L~y~P~~~~e 534 (664)
|++||++.++|..|..+ -+.++|.+. .+. -..|.|.+.+.+.....+.
T Consensus 802 --ddfiG~~~lpL~~L~~G---yR~vpL~~~---~g~~l~~atLfv~i~~~~~~~~~ 850 (885)
T 3ohm_B 802 --GKFVGHRILPVSAIRSG---YHYVCLRNE---ANQPLCLPALLIYTEASDYIPDD 850 (885)
T ss_dssp --TEEEEEEEEETTTCCCE---EEEEEEECT---TSCEEEEEEEEEEEEEEECCCGG
T ss_pred --ccEEeeEEEEHHHcCCC---ceEEEecCC---CCCccCceEEEEEEEEEecCCcc
Confidence 89999999999999765 456777653 122 2579999999998777553
No 47
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.94 E-value=3.5e-09 Score=124.56 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=89.9
Q ss_pred eeeEEEEEEEeceecccccCCCCcEEEEEeccccccceeeeeeE-EeC-CCCCccccc-eEEE-EEecCCCcEEEEEEEe
Q 006016 400 FVGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRSKKNSQTT-VFG-PPGEPIWNQ-DFHL-LVANPRKQKLYIQVKD 475 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~sk~~~kT~-Vik-~tlnPvWnE-tf~f-~V~~~~~q~L~I~V~D 475 (664)
..|.|.|+|++|++|+. +++||||++.+.+.....+..+||+ +++ ++.||+||| +|.| .+..+....|+++|||
T Consensus 676 ~~~~L~V~Visa~~L~~--~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D 753 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE--RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVME 753 (799)
T ss_dssp TCEEEEEEEEEEESCCS--SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEE
T ss_pred eeeeEEEEEEeccccCc--cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEE
Confidence 46899999999999984 5789999999965322222235798 776 469999999 7999 7876656789999999
Q ss_pred cCCCCCceeEeEEeecCcccCCCccceEEEecCCcccCCC-ceeeEEEEEEEEE
Q 006016 476 SFGFADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKN-GFTGELLLRLTYK 528 (664)
Q Consensus 476 ~d~~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~-k~~G~I~L~L~y~ 528 (664)
++ |++||++.++|..|..+ .++++|.+. .+. -..+.|.+.+.+.
T Consensus 754 ~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~---~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 754 EG---NKFLGHRIIPINALNSG---YHHLCLHSE---SNMPLTMPALFIFLEMK 798 (799)
T ss_dssp TT---TEEEEEEEEEGGGBCCE---EEEEEEECT---TCCEEEEEEEEEEEEEE
T ss_pred eC---CCccceEeeehhhcCCC---cEEEeccCC---CCCCCCceEEEEEEEEE
Confidence 97 79999999999999764 457788552 111 2457787777664
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.93 E-value=5.9e-09 Score=122.44 Aligned_cols=124 Identities=20% Similarity=0.249 Sum_probs=94.6
Q ss_pred eeEEEEEEEeceecccccCCCCcEEEEEeccccccc-eeeeeeEEeCC-CCCccccce-EEEE-EecCCCcEEEEEEEec
Q 006016 401 VGELSVTLVDARKLFYIYGKPDPYVVLSLGDQIIRS-KKNSQTTVFGP-PGEPIWNQD-FHLL-VANPRKQKLYIQVKDS 476 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl~~~~~~s-k~~~kT~Vik~-tlnPvWnEt-f~f~-V~~~~~q~L~I~V~D~ 476 (664)
.+.|.|+|++|++|+. ..+||||++.+.+..... +..++|+++++ +.||+|||+ |.|. +..++...|+++|||+
T Consensus 649 ~~~L~V~Visaq~L~~--~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD--KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp CEEEEEEEEEEECCCS--SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEcccCCC--CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 4789999999999985 468999999997643221 13468999886 699999998 9998 7666567899999998
Q ss_pred CCCCCceeEeEEeecCcccCCCccceEEEecCCcccCCCceeeEEEEEEEEEecCCCC
Q 006016 477 FGFADISIGTGEVDLGSLKDTVPTDRIVELRGGWGLFKNGFTGELLLRLTYKAYVEDE 534 (664)
Q Consensus 477 d~~kDd~LG~~~IdL~~L~~~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~P~~~~e 534 (664)
+ |++||++.++|+.|..+ -++++|.+.. ...-..++|.+.+.+.....+.
T Consensus 727 d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~--g~~~~~atLfv~i~~~~~~~~~ 776 (816)
T 3qr0_A 727 N---GKFIGHRVMPLDGIKPG---YRHVPLRNES--NRPLGLASVFAHIVAKDYVSDA 776 (816)
T ss_dssp T---SCEEEEEEEESTTCCCE---EEEEEEECTT--SCEEEEEEEEEEEEEEECCC--
T ss_pred C---CCeeeEEEEEHHHcCCc---ceEEEEeCCC--CCCCCceEEEEEEEEEecCchh
Confidence 5 78999999999999875 4567776531 1112458899999888766553
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.92 E-value=1.3e-09 Score=126.03 Aligned_cols=106 Identities=23% Similarity=0.306 Sum_probs=88.0
Q ss_pred eeEEEEEEEeceecccc--cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC-CcEEEEEEEecC
Q 006016 401 VGELSVTLVDARKLFYI--YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR-KQKLYIQVKDSF 477 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~~~--~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~-~q~L~I~V~D~d 477 (664)
.+.|.|+|.+|++|... .|.+|||+++++..... ....++|+++++++||+|||+|.|.+.... ...|.++|||+|
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~-~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPK-SESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSS-CCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCcc-ccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 57899999999999988 88999999999853321 123458999999999999999999987543 467999999999
Q ss_pred CC-CCceeEeEEeecCcccCCCccceEEEecC
Q 006016 478 GF-ADISIGTGEVDLGSLKDTVPTDRIVELRG 508 (664)
Q Consensus 478 ~~-kDd~LG~~~IdL~~L~~~~~~d~~~~L~~ 508 (664)
.. +|++||.+.+++.++... ..+.|+.|..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~-~~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHC-CEEEEEECBC
T ss_pred cccccccccccccchhhhccC-Ccccceeecc
Confidence 86 899999999999999775 3578888744
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.72 E-value=8.8e-08 Score=87.37 Aligned_cols=111 Identities=13% Similarity=0.189 Sum_probs=86.0
Q ss_pred eEEEEEEEecee--cccccCCCCcEEEEEeccccccceeeeee-EEeCCCCCccccceEEEEEecCCCcEEEEEEEecCC
Q 006016 402 GELSVTLVDARK--LFYIYGKPDPYVVLSLGDQIIRSKKNSQT-TVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDSFG 478 (664)
Q Consensus 402 GvL~VtV~~Ar~--L~~~~G~sDPYV~vsl~~~~~~sk~~~kT-~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~d~ 478 (664)
+.|+|.+.++.- |+......||||.+.+...... ...+| ...++|..|+|||+|.-.+++ ...|.+.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~--e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALST--ERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEE--TTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEc--ccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC
Confidence 568888876653 2221345799999998765432 12355 777889999999999999887 5799999997654
Q ss_pred CCCceeEeEEeecCcccC-----CCccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 479 FADISIGTGEVDLGSLKD-----TVPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 479 ~kDd~LG~~~IdL~~L~~-----~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
++++.|.+.+++|.+ +...+.|+.| ++.|+|++.++|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL---------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL---------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC---------BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEec---------ccCcEEEEEEEEe
Confidence 899999999999973 3455789988 5799999999997
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.65 E-value=1.3e-07 Score=87.42 Aligned_cols=112 Identities=21% Similarity=0.208 Sum_probs=86.8
Q ss_pred eeEEEEEEEeceecc--cc-cCCCCcEEEEEeccccccceeeeee-EEeCCCCCccccceEEEEEecCCCcEEEEEEEec
Q 006016 401 VGELSVTLVDARKLF--YI-YGKPDPYVVLSLGDQIIRSKKNSQT-TVFGPPGEPIWNQDFHLLVANPRKQKLYIQVKDS 476 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~--~~-~G~sDPYV~vsl~~~~~~sk~~~kT-~Vik~tlnPvWnEtf~f~V~~~~~q~L~I~V~D~ 476 (664)
.+.|+|.+.+..--+ .. ....||||.+.+...... ...+| ...++|..|+|||+|.-.|.+ ...|.|.|++.
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~t--e~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~ 84 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVES--ENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGK 84 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEE--TTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECS
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeec--cCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcC
Confidence 467899987765322 21 335799999998765331 12456 677789999999999988887 57999999965
Q ss_pred CCCCCceeEeEEeecCcccC-----CCccceEEEecCCcccCCCceeeEEEEEEEEE
Q 006016 477 FGFADISIGTGEVDLGSLKD-----TVPTDRIVELRGGWGLFKNGFTGELLLRLTYK 528 (664)
Q Consensus 477 d~~kDd~LG~~~IdL~~L~~-----~~~~d~~~~L~~~~~~~~~k~~G~I~L~L~y~ 528 (664)
.. +++..|.+.+++|.+ +...+.|+.| ++.|+|++.++|+
T Consensus 85 a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdL---------eP~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 NV---DLISETTVELYSLAERCRKNNGKTEIWLEL---------KPQGRMLMNARYF 129 (138)
T ss_dssp SC---SCCEEEEEESHHHHHHHHHTTTCEEEEEEC---------BSSCEEEEEEEEC
T ss_pred CC---CeeeEEEEEHHHHHhhhccCCCceEEEEec---------ccCcEEEEEEEEE
Confidence 54 899999999999973 3456889998 5799999999996
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.51 E-value=1.7 Score=40.96 Aligned_cols=127 Identities=11% Similarity=0.056 Sum_probs=87.5
Q ss_pred ceeeEEEEEEEeceecccc---cCCCCcEEEEEeccccccceeeeeeEEeCCCCCccccceEEEEEecCC-------CcE
Q 006016 399 DFVGELSVTLVDARKLFYI---YGKPDPYVVLSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVANPR-------KQK 468 (664)
Q Consensus 399 ~~~GvL~VtV~~Ar~L~~~---~G~sDPYV~vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~~~~-------~q~ 468 (664)
.-.+.+.|+|.++.=-+.. .+..+|+.-++..--.+.. ..|.++. +.+|.+|-+..+.|.... ...
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEt---q~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFEL---QTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCC---EECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEe---eeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 3468899999988632222 4566887777766444432 2355444 789999999988885432 457
Q ss_pred EEEEEEecCCCCCceeEeEEeecCcccCCCc-cceEEEecCCcccCCC-ceeeEEEEEEEEEecCC
Q 006016 469 LYIQVKDSFGFADISIGTGEVDLGSLKDTVP-TDRIVELRGGWGLFKN-GFTGELLLRLTYKAYVE 532 (664)
Q Consensus 469 L~I~V~D~d~~kDd~LG~~~IdL~~L~~~~~-~d~~~~L~~~~~~~~~-k~~G~I~L~L~y~P~~~ 532 (664)
+.++++......-..+|.+.++|.++.+... .....+|.+. .+. ..-|.|.+.+++....+
T Consensus 91 l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~---~g~~~~~G~LeywiRL~~Pi~ 153 (156)
T 2yrb_A 91 ITLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGT---KGDIPNFGTVEYWFRLRVSGP 153 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBS---SSCCTTSEEEEEEEEEEECCC
T ss_pred EEEEEEEeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcC---CCCcceEEEEEEEEEEecccC
Confidence 8999988766566799999999999976533 3445566542 122 46899999999876544
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=65.43 E-value=86 Score=30.96 Aligned_cols=54 Identities=9% Similarity=0.180 Sum_probs=39.3
Q ss_pred eeeeEEeCCCCCccccceEEEEEecC--CCcEEEEEEEecCCC--C---CceeEeEEeecC
Q 006016 439 NSQTTVFGPPGEPIWNQDFHLLVANP--RKQKLYIQVKDSFGF--A---DISIGTGEVDLG 492 (664)
Q Consensus 439 ~~kT~Vik~tlnPvWnEtf~f~V~~~--~~q~L~I~V~D~d~~--k---Dd~LG~~~IdL~ 492 (664)
.++|.|...+.+|.|+|++.+.+... ....|.+++++.... + +..+|.+-++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 45788889999999999999888653 367899999886531 2 235666666554
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=60.70 E-value=21 Score=42.70 Aligned_cols=93 Identities=22% Similarity=0.332 Sum_probs=59.3
Q ss_pred eeeEEEEEEEeceecccccCCCCcEEEEEe--ccccccceeeeeeEEeCCCCCccccceEEEEEe--c-CCCcEEEEEEE
Q 006016 400 FVGELSVTLVDARKLFYIYGKPDPYVVLSL--GDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVA--N-PRKQKLYIQVK 474 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~~G~sDPYV~vsl--~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~--~-~~~q~L~I~V~ 474 (664)
....+.|+|..+.++... ...+-||.+.+ |++... .. .+|..+.-..+|.|||.+.|.+. + |....|.+++|
T Consensus 215 ~~~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~l~-~~-~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD-ERMKLVVQAGLFHGNEMLC-KT-VSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC----CEEEEEEEEEETTEESS-CC-EECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC-CCceEEEEEEEEECCEEcc-Cc-eecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 456799999999887533 23466776554 444332 11 13444444678999999888775 3 45789999999
Q ss_pred ecCCC-------------CCceeEeEEeecCccc
Q 006016 475 DSFGF-------------ADISIGTGEVDLGSLK 495 (664)
Q Consensus 475 D~d~~-------------kDd~LG~~~IdL~~L~ 495 (664)
+.... .+..+|.+.++|-+-.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 96321 2447888888776643
No 55
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=57.77 E-value=28 Score=42.17 Aligned_cols=92 Identities=17% Similarity=0.274 Sum_probs=58.7
Q ss_pred eeeEEEEEEEeceecccc-cCCCCcEEEEEe--ccccccceeeeeeEEeCCCCCccccceEEEEEe--c-CCCcEEEEEE
Q 006016 400 FVGELSVTLVDARKLFYI-YGKPDPYVVLSL--GDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVA--N-PRKQKLYIQV 473 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~-~G~sDPYV~vsl--~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~--~-~~~q~L~I~V 473 (664)
....++|+|..+.++... ....+-||.+.+ |++... .. .+|+.+ ...+|.|||...|.+. + |....|.++|
T Consensus 353 ~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~-~~-~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLC-DN-VNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSC-CE-ECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEcc-Cc-eecccc-CCCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 346789999999887533 334567887665 444332 11 134333 3467889999888774 3 4578999999
Q ss_pred EecCCC-----CCceeEeEEeecCcc
Q 006016 474 KDSFGF-----ADISIGTGEVDLGSL 494 (664)
Q Consensus 474 ~D~d~~-----kDd~LG~~~IdL~~L 494 (664)
|+.... ....||.+.++|-+-
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCT
T ss_pred EEecCccCcccccceeEEeeeeeEcc
Confidence 987642 234678777777654
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=36.92 E-value=70 Score=38.30 Aligned_cols=93 Identities=13% Similarity=0.061 Sum_probs=55.7
Q ss_pred eeEEEEEEEeceecc-cccCCCCcEEEEE--eccccccceeeeeeEEeCCCCCccccceEEEEEe--c-CCCcEEEEEEE
Q 006016 401 VGELSVTLVDARKLF-YIYGKPDPYVVLS--LGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVA--N-PRKQKLYIQVK 474 (664)
Q Consensus 401 ~GvL~VtV~~Ar~L~-~~~G~sDPYV~vs--l~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~--~-~~~q~L~I~V~ 474 (664)
...++|+|..+.... +.+...+-||.+. -|++... . .+|+.+.-+.+|.|||.+.|.+. + |....|.+++|
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~-~--~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLC-Q--RRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEE-E--EECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcc-c--ceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 456888888775421 1123346677754 3443332 1 23444445667999998888764 3 45789999999
Q ss_pred ecCCC-----------------CCceeEeEEeecCcccC
Q 006016 475 DSFGF-----------------ADISIGTGEVDLGSLKD 496 (664)
Q Consensus 475 D~d~~-----------------kDd~LG~~~IdL~~L~~ 496 (664)
+.... +...+|.+.++|-+-..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCTTS
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 85321 23477888777766433
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=30.63 E-value=63 Score=39.26 Aligned_cols=75 Identities=21% Similarity=0.312 Sum_probs=49.7
Q ss_pred eeeEEEEEEEeceecccccCCCCcEEE--EEeccccccceeeeeeEEeCCCCCccccceEEEEEe--c-CCCcEEEEEEE
Q 006016 400 FVGELSVTLVDARKLFYIYGKPDPYVV--LSLGDQIIRSKKNSQTTVFGPPGEPIWNQDFHLLVA--N-PRKQKLYIQVK 474 (664)
Q Consensus 400 ~~GvL~VtV~~Ar~L~~~~G~sDPYV~--vsl~~~~~~sk~~~kT~Vik~tlnPvWnEtf~f~V~--~-~~~q~L~I~V~ 474 (664)
....+.|+|..+.++... ...+-||. ++-|++... .. .+|..+.-..+|.|||.+.|.+. + +....|.+++|
T Consensus 351 ~~~~f~i~i~~~~~~~~~-~~~~~~V~~~l~~g~~~L~-~~-~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE-ETVKVHVRAGLFHGTELLC-KT-VVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC-SSCCCCCBCCEEETTEESS-CC-CBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC-CCceEEEEEEEEECCEEcc-Cc-eecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346799999999887543 23466666 444554432 11 23544555678999999888765 3 44789999999
Q ss_pred ecC
Q 006016 475 DSF 477 (664)
Q Consensus 475 D~d 477 (664)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 863
No 58
>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}
Probab=26.14 E-value=4.1e+02 Score=24.89 Aligned_cols=43 Identities=14% Similarity=-0.048 Sum_probs=22.8
Q ss_pred EEEeeccccCeeEEEEEEEEEEEEEEEEEEEecCCCCccCeeeE
Q 006016 281 MLSLKFGIIPIAVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSW 324 (664)
Q Consensus 281 ~v~l~~g~~g~~lpV~V~~l~~~G~lRV~l~L~~~~P~v~~v~v 324 (664)
.+.++.+.++.+..+.+.--.+...+.+.+.+ +..|.+....+
T Consensus 100 ~~~~~~~~~~~~g~v~~~i~~~~v~~~~~~~~-~~~~~l~~f~i 142 (196)
T 3uv1_A 100 DLAYKLGDLHPTTHVISDIQDFVVALSLEIPD-EGNITMTSFEV 142 (196)
T ss_dssp EEEEEBTTBCCEEEEEEEEETCEEEEEEEEES-SSCCEEEEEEE
T ss_pred EEEEEEcccCCcEEEEEEEEEEEEEEEEEEcC-CCceeeceece
Confidence 34445555555556655555566666666654 33455444444
No 59
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=23.70 E-value=6.7e+02 Score=26.48 Aligned_cols=20 Identities=10% Similarity=0.237 Sum_probs=14.4
Q ss_pred eEEEEEEEEEEEEEEEEEEE
Q 006016 292 AVPVGVRDFDIDGELWVKLR 311 (664)
Q Consensus 292 ~lpV~V~~l~~~G~lRV~l~ 311 (664)
.+.+.++++.+.+.+|+...
T Consensus 103 ~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 103 NFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEEEEEEEeec
Confidence 46777778888887777655
Done!